Works matching IS 00778923 AND DT 2007 AND VI 1115

Results: 21

Algorithmic Issues in Reverse Engineering of Protein and Gene Networks via the Modular Response Analysis Method.

Published in:

Annals of the New York Academy of Sciences, 2007, v. 1115, p. 132, doi. 10.1196/annals.1407.001

By:

BERMAN, PIOTR;
DASGUPTA, BHASKAR;
SONTAG, EDUARDO

Publication type:

Article

A Framework for Elucidating Regulatory Networks Based on Prior Information and Expression Data.

Published in:

Annals of the New York Academy of Sciences, 2007, v. 1115, p. 240, doi. 10.1196/annals.1407.002

By:

GEVAERT, OLIVIER;
VAN VOOREN, STEVEN;
DE MOOR, BART

Publication type:

Article

Extracting Falsifiable Predictions from Sloppy Models.

Published in:

Annals of the New York Academy of Sciences, 2007, v. 1115, p. 203, doi. 10.1196/annals.1407.003

By:

GUTENKUNST, RYAN N.;
CASEY, FERGAL P.;
WATERFALL, JOSHUA J.;
MYERS, CHRISTOPHER R.;
SETHNA, JAMES P.

Publication type:

Article

Improving Protein–Protein Interaction Prediction Based on Phylogenetic Information Using a Least-Squares Support Vector Machine.

Published in:

Annals of the New York Academy of Sciences, 2007, v. 1115, p. 154, doi. 10.1196/annals.1407.005

By:

CRAIG, ROGER A.;
LIAO, LI

Publication type:

Article

Comparison of Reverse-Engineering Methods Using an in Silico Network.

Published in:

Annals of the New York Academy of Sciences, 2007, v. 1115, p. 73, doi. 10.1196/annals.1407.006

By:

CAMACHO, DIOGO;
VERA LICONA, PAOLA;
MENDES, PEDRO;
LAUBENBACHER, REINHARD

Publication type:

Article

Dynamic Pathway Modeling.

Published in:

Annals of the New York Academy of Sciences, 2007, v. 1115, p. 212, doi. 10.1196/annals.1407.007

By:

MAIWALD, THOMAS;
KREUTZ, CLEMENS;
PFEIFER, ANDREA C.;
BOHL, SEBASTIAN;
KLINGMÜLLER, URSULA;
TIMMER, JENS

Publication type:

Article

Data Requirements of Reverse-Engineering Algorithms.

Published in:

Annals of the New York Academy of Sciences, 2007, v. 1115, p. 142, doi. 10.1196/annals.1407.008

By:

JUST, WINFRIED

Publication type:

Article

Benchmarking of Dynamic Bayesian Networks Inferred from Stochastic Time-Series Data.

Published in:

Annals of the New York Academy of Sciences, 2007, v. 1115, p. 90, doi. 10.1196/annals.1407.009

By:

DAVID, LAWRENCE A.;
WIGGINS, CHRIS H.

Publication type:

Article

CellFrame: A Data Structure for Abstraction of Cell Biology Experiments and Construction of Perturbation Networks.

Published in:

Annals of the New York Academy of Sciences, 2007, v. 1115, p. 249, doi. 10.1196/annals.1407.010

By:

GONG, YUNCHEN;
ZHANG, ZHAOLEI

Publication type:

Article

Alternative Pathway Approach for Automating Analysis and Validation of Cell Perturbation Networks and Design of Perturbation Experiments.

Published in:

Annals of the New York Academy of Sciences, 2007, v. 1115, p. 267, doi. 10.1196/annals.1407.011

By:

GONG, YUNCHEN;
ZHANG, ZHAOLEI

Publication type:

Article

Reverse Engineering of Dynamic Networks.

Published in:

Annals of the New York Academy of Sciences, 2007, v. 1115, p. 168, doi. 10.1196/annals.1407.012

By:

STIGLER, B.;
JARRAH, A.;
STILLMAN, M.;
LAUBENBACHER, R.

Publication type:

Article

Reconstruction of Metabolic Networks from High-Throughput Metabolite Profiling Data.

Published in:

Annals of the New York Academy of Sciences, 2007, v. 1115, p. 102, doi. 10.1196/annals.1407.013

By:

NEMENMAN, ILYA;
ESCOLA, G. SEAN;
HLAVACEK, WILLIAM S.;
UNKEFER, PAT J.;
UNKEFER, CLIFFORD J.;
WALL, MICHAEL E.

Publication type:

Article

Sensitivity Analysis of a Computational Model of the IKK–NF-κB–IκBα–A20 Signal Transduction Network.

Published in:

Annals of the New York Academy of Sciences, 2007, v. 1115, p. 221, doi. 10.1196/annals.1407.014

By:

JOO, JAEWOOK;
PLIMPTON, STEVE;
MARTIN, SHAWN;
SWILER, LAURA;
FAULON, JEAN‐LOUP

Publication type:

Article

The Gap Gene System of Drosophila melanogaster.

Published in:

Annals of the New York Academy of Sciences, 2007, v. 1115, p. 116, doi. 10.1196/annals.1407.015

By:

PERKINS, THEODORE J.

Publication type:

Article

ENFIN—a Network to Enhance Integrative Systems Biology.

Published in:

Annals of the New York Academy of Sciences, 2007, v. 1115, p. 23, doi. 10.1196/annals.1407.016

By:

KAHLEM, PASCAL;
BIRNEY, EWAN

Publication type:

Article

Reconstructing Signal Transduction Pathways.

Published in:

Annals of the New York Academy of Sciences, 2007, v. 1115, p. 32, doi. 10.1196/annals.1407.018

By:

LEVINE, ARNOLD J.;
HU, WENWEI;
FENG, ZHAOHUI;
GIL, GERMAN

Publication type:

Article

Theory and Limitations of Genetic Network Inference from Microarray Data.

Published in:

Annals of the New York Academy of Sciences, 2007, v. 1115, p. 51, doi. 10.1196/annals.1407.019

By:

MARGOLIN, ADAM A.;
CALIFANO, ANDREA

Publication type:

Article

Learning Regulatory Programs That Accurately Predict Differential Expression with MEDUSA.

Published in:

Annals of the New York Academy of Sciences, 2007, v. 1115, p. 178, doi. 10.1196/annals.1407.020

By:

KUNDAJE, ANSHUL;
LIANOGLOU, STEVE;
LI, XUEJING;
QUIGLEY, DAVID;
ARIAS, MARTA;
WIGGINS, CHRIS H.;
ZHANG, LI;
LESLIE, CHRISTINA

Publication type:

Article

Dialogue on Reverse-Engineering Assessment and Methods.

Published in:

Annals of the New York Academy of Sciences, 2007, v. 1115, p. 1, doi. 10.1196/annals.1407.021

By:

STOLOVITZKY, GUSTAVO;
MONROE, DON;
CALIFANO, ANDREA

Publication type:

Article

Preface.

Published in:

Annals of the New York Academy of Sciences, 2007, v. 1115, p. xi, doi. 10.1196/annals.1407.022

By:

Stolovitzky, Gustavo;
Califano, Andrea

Publication type:

Article

Index of Contributors.

Published in:: Annals of the New York Academy of Sciences, 2007, v. 1115, p. 287, doi. 10.1196/annals.1407.auindex_1
Publication type:: Article