Works matching Homoplasy

Results: 1221

Revealing patterns of homoplasy in discrete phylogenetic datasets with a cross-comparable index Open Access.

Published in:

Zoological Journal of the Linnean Society, 2025, v. 204, n. 1, p. 1, doi. 10.1093/zoolinnean/zlaf024

By:

Steell, Elizabeth M;
Hsiang, Allison Y;
Field, Daniel J

Publication type:

Article

What phylogeny and gene genealogy analyses reveal about homoplasy in citrus microsatellite alleles.

Published in:

Plant Systematics & Evolution, 2009, v. 282, n. 1/2, p. 71, doi. 10.1007/s00606-009-0208-2

By:

Barkley, Noelle A.;
Krueger, Robert R.;
Federici, Claire T.;
Roose, Mikeal L.

Publication type:

Article

Homoplasy of Retrotransposon Insertions in Toothed Whales.

Published in:

Genes, 2023, v. 14, n. 9, p. 1830, doi. 10.3390/genes14091830

By:

Doronina, Liliya;
Ogoniak, Lynn;
Schmitz, Jürgen

Publication type:

Article

Testing and Quantifying Phylogenetic Signals and Homoplasy in Morphometric Data.

Published in:

Systematic Biology, 2010, v. 59, n. 3, p. 245, doi. 10.1093/sysbio/syp106

By:

KLINGENBERG, CHRISTIAN PETER;
GIDASZEWSKI, NELLY A.

Publication type:

Article

Appropriate homoplasy metrics in linked SSRs to predict an underestimation of demographic expansion times.

Published in:

BMC Evolutionary Biology, 2017, v. 17, p. 1, doi. 10.1186/s12862-017-1046-4

By:

Vecchyo, Diego Ortega-Del;
Piñero, Daniel;
Jardón-Barbolla, Lev;
van Heerwaarden, Joost

Publication type:

Article

Phylogeny and evolution of grammitid ferns (Grammitidaceae): a case of rampant morphological homoplasy.

Published in:

Taxon, 2004, v. 53, n. 2, p. 415, doi. 10.2307/4135619

By:

Ranker, Tom A.;
Smith, Alan R.;
Parris, Barbara S.;
Geiger, Jennifer M.O.;
Haufler, Christopher H.;
Straub, Shannon C.K.;
Schneider, Harald

Publication type:

Article

Exploiting Homoplasy in Genome-Wide Association Studies to Enhance Identification of Antibiotic-Resistance Mutations in Bacterial Genomes.

Published in:

Evolutionary Bioinformatics, 2020, v. 16, p. 1, doi. 10.1177/1176934320944932

By:

Lai, Yi-Pin;
Ioerger, Thomas R

Publication type:

Article

Exploiting Homoplasy in Genome-Wide Association Studies to Enhance Identification of Antibiotic-Resistance Mutations in Bacterial Genomes.

Published in:

Evolutionary Bioinformatics, 2020, p. 1, doi. 10.1177/1176934320944932

By:

Lai, Yi-Pin;
Ioerger, Thomas R

Publication type:

Article

Comparative Sequencing of a Microsatellite Locus Reveals Size Homoplasy Within and Between European Oak Species (Quercus spp.).

Published in:

Plant Molecular Biology Reporter, 2004, v. 22, n. 4, p. 339, doi. 10.1007/BF02772677

By:

Curtu, Alexandru-Lucian;
Finkeldey, Reiner;
Gailing, Oliver

Publication type:

Article

Nine porcine microsatellite loci tested for size homoplasy in genetically diverse breeds.

Published in:

Animal Genetics, 2005, v. 36, n. 3, p. 244, doi. 10.1111/j.1365-2052.2005.01283.x

By:

Peischl, T.;
Kuss, A. W.;
Melchinger-Wild, E.;
Geldermann, H.

Publication type:

Article

Review and simulation of homoplasy and collision in AFLP.

Published in:

Euphytica, 2012, v. 183, n. 3, p. 389, doi. 10.1007/s10681-011-0368-3

By:

Gort, Gerrit;
Eeuwijk, Fred

Publication type:

Article

Evolution, Extinction, Homology and Homoplasy of the Larger Benthic Foraminifera from the Carboniferous to the Present Day, as Exemplified by Planispiral-Fusiform and Discoidal Forms.

Published in:

Journal of Earth Science, 2022, v. 33, n. 6, p. 1348, doi. 10.1007/s12583-021-1596-7

By:

BouDagher-Fadel, Marcelle K.

Publication type:

Article

Pattern formation features might explain homoplasy: fertile surfaces in higher fungi as an example.

Published in:

Theory in Biosciences, 2022, v. 141, n. 1, p. 1, doi. 10.1007/s12064-022-00363-z

By:

Kuhar, Francisco;
Terzzoli, Leticia;
Nouhra, Eduardo;
Robledo, Gerardo;
Mercker, Moritz

Publication type:

Article

Homoplasy as an Auxiliary Criterion for Species Delimitation.

Published in:

Microorganisms, 2021, v. 9, n. 2, p. 273, doi. 10.3390/microorganisms9020273

By:

Conti, Angela;
Casagrande Pierantoni, Debora;
Robert, Vincent;
Cardinali, Gianluigi;
Corte, Laura;
de Winde, J.H.

Publication type:

Article

HEXT, a software supporting tree-based screens for hybrid taxa in multilocus data sets, and an evaluation of the homoplasy excess test.

Published in:

Methods in Ecology & Evolution, 2016, v. 7, n. 3, p. 358, doi. 10.1111/2041-210X.12490

By:

Schneider, Kevin;
Koblmüller, Stephan;
Sefc, Kristina M.;
Paradis, Emmanuel

Publication type:

Article

Evolution and homoplasy at the Bem6 microsatellite locus in three sweetpotato whitefly (Bemisia tabaci) cryptic species.

Published in:

BMC Research Notes, 2013, v. 6, n. 1, p. 1, doi. 10.1186/1756-0500-6-249

By:

Dickey, Aaron M.;
Hall, Paula M.;
Shatters Jr, Robert G.;
Mckenzie, Cindy L.

Publication type:

Article

Champagne: Automated Whole-Genome Phylogenomic Character Matrix Method Using Large Genomic Indels for Homoplasy-Free Inference.

Published in:

Genome Biology & Evolution, 2022, v. 14, n. 3, p. 1, doi. 10.1093/gbe/evac013

By:

Schull, James K;
Turakhia, Yatish;
Hemker, James A;
Dally, William J;
Bejerano, Gill

Publication type:

Article

Reconstruction of Some Hybrid Phylogenetic Networks with Homoplasies from Distances.

Published in:

Bulletin of Mathematical Biology, 2007, v. 69, n. 8, p. 2561, doi. 10.1007/s11538-007-9232-y

By:

Willson, Stephen J.

Publication type:

Article

Unique Determination of Some Homoplasies at Hybridization Events.

Published in:

Bulletin of Mathematical Biology, 2007, v. 69, n. 5, p. 1709, doi. 10.1007/s11538-006-9187-4

By:

Willson, Stephen J.

Publication type:

Article

Assessing substitution patterns, rates and homoplasy at HVRI of Steller sea lions, Eumetopias jubatus.

Published in:

Molecular Ecology, 2009, v. 18, n. 16, p. 3379, doi. 10.1111/j.1365-294X.2009.04283.x

By:

Phillips, C. D.;
Trujillo, R. G.;
Gelatt, T. S.;
Smolen, M. J.;
Matson, C. W.;
Honeycutt, R. L.;
Patton, J. C.;
Bickham, J. W.

Publication type:

Article

Chloroplast microsatellites: measures of genetic diversity and the effect of homoplasy.

Published in:

Molecular Ecology, 2005, v. 14, n. 5, p. 1333, doi. 10.1111/j.1365-294X.2005.02504.x

By:

Navascués, M.;
Emerson, B. C.

Publication type:

Article

Homoplasy and mutation model at microsatellite loci and their consequences for population genetics analysis.

Published in:

Molecular Ecology, 2002, v. 11, n. 9, p. 1591, doi. 10.1046/j.1365-294X.2002.01576.x

By:

Estoup, Arnaud;
Jarne, Philippe;
Cornuet, Jean-Marie

Publication type:

Article

A Simple method for the detection of size homoplasy among amplified fragment length polymorphism fragments.

Published in:

Molecular Ecology, 2000, v. 9, n. 6, p. 815, doi. 10.1046/j.1365-294X.2000.00924.x

By:

O’Hanlon, Peter C.;
Peakall, Rod

Publication type:

Article

Phylogenetic incongruence and homoplasy in the appendages and bodies of arthropods: why broad character sampling is best.

Published in:

Zoological Journal of the Linnean Society, 2019, v. 187, n. 1, p. 100, doi. 10.1093/zoolinnean/zlz024

By:

Brinkworth, Andrew R;
Sansom, Robert;
Wills, Matthew A

Publication type:

Article

Phylogenetic signal of genomic repeat abundances can be distorted by random homoplasy: a case study from hominid primates.

Published in:

Zoological Journal of the Linnean Society, 2019, v. 185, n. 3, p. 543, doi. 10.1093/zoolinnean/zly077

By:

Martín-Peciña, María;
Ruiz-Ruano, Francisco J;
Camacho, Juan Pedro M;
Dodsworth, Steven

Publication type:

Article

Sectional polyphyly and morphological homoplasy in Southeast Asian Cyrtandra (Gesneriaceae): consequences for the taxonomy of a mega-diverse genus.

Published in:

Plant Systematics & Evolution, 2021, v. 307, n. 6, p. 1, doi. 10.1007/s00606-021-01784-x

By:

Atkins, Hannah J.;
Bramley, Gemma L.C.;
Nishii, Kanae;
Möller, Michael;
Olivar, Jay E. C.;
Kartonegoro, Abdulrokhman;
Hughes, Mark

Publication type:

Article

Causes of Size Homoplasy Among Chloroplast Microsatellites in Closely Related Clusia Species.

Published in:

Journal of Molecular Evolution, 2004, v. 58, n. 2, p. 182, doi. 10.1007/s00239-003-2540-4

By:

Hale, Marie L.;
Borland, Anne M.;
Gustafsson, Mats H. G.;
Wolff, Kirsten

Publication type:

Article

When Homoplasy Is Not Homoplasy: Dissecting Trait Evolution by Contrasting Composite and Reductive Coding.

Published in:

Systematic Biology, 2018, v. 67, n. 3, p. 543, doi. 10.1093/sysbio/syx053

By:

TORRES-MONTÚFAR, ALEJANDRO;
BORSCH, THOMAS;
OCHOTERENA, HELGA

Publication type:

Article

Systematic significance and evolutionary dynamics of the achene twin hairs in Filago (Asteraceae, Gnaphalieae) and related genera: further evidence of morphological homoplasy.

Published in:

Plant Systematics & Evolution, 2015, v. 301, n. 6, p. 1653, doi. 10.1007/s00606-014-1185-7

By:

Andrés-Sánchez, Santiago;
Galbany-Casals, Mercè;
Bergmeier, Erwin;
Rico, Enrique;
Martínez-Ortega, M.

Publication type:

Article

Phylogenetic analysis of morphology in Prunus reveals extensive homoplasy.

Published in:

Plant Systematics & Evolution, 2006, v. 259, n. 1, p. 53, doi. 10.1007/s00606-006-0427-8

By:

Bortiri, E.;
Vanden Heuvel, B.;
Potter, D.

Publication type:

Article

Homoplasies, Consistency Index and the Complexity of Morphological Evolution: Catfishes as a Case Study for General Discussions on Phylogeny and Macroevolution.

Published in:

International Journal of Morphology, 2007, v. 25, n. 4, p. 831, doi. 10.4067/S0717-95022007000400024

By:

Diogo, Rui

Publication type:

Article

Phylogenetic analysis of the tribe Macropelopiini ( Chironomidae: Tanypodinae): adjusting homoplasies.

Published in:

Zoological Journal of the Linnean Society, 2015, v. 174, n. 1, p. 74, doi. 10.1111/zoj.12228

By:

Siri, Augusto;
Donato, Mariano

Publication type:

Article

APPARENT SIMILARITY, UNDERLYING HOMOPLASY: MORPHOLOGY AND MOLECULAR PHYLOGENY OF THE NORTH AMERICAN CLADE OF MANIHOT.

Published in:

American Journal of Botany, 2015, v. 102, n. 4, p. 520, doi. 10.3732/ajb.1500063

By:

Cervantes‐Alcayde, María‐Angélica;
Olson, Mark E.;
Olsen, Kenneth M.;
Eguiarte, Luis E.

Publication type:

Article

Homology, homoplasy and cusp variability at the enamel-dentine junction of hominoid molars.

Published in:

Journal of Anatomy, 2017, v. 231, n. 4, p. 585, doi. 10.1111/joa.12649

By:

Ortiz, Alejandra;
Bailey, Shara E.;
Hublin, Jean‐Jacques;
Skinner, Matthew M.

Publication type:

Article

Rampant homoplasy and adaptive radiation in pennate diatoms.

Published in:

Plant Ecology & Evolution, 2019, v. 152, n. 2, p. 131, doi. 10.5091/plecevo.2019.1612

By:

Kociolek, J. Patrick;
Williams, David M.;
Stepanek, Joshua;
Qi Liu;
Yan Liu;
Qingmin You;
Karthick, Balasubramanian;
Kulikovskiy, Maxim

Publication type:

Article

Weighing homoplasy against alternative scenarios with the help of macroevolutionary modeling: A case study on limb bones of fossorial sciuromorph rodents.

Published in:

Ecology & Evolution (20457758), 2019, v. 9, n. 19, p. 11025, doi. 10.1002/ece3.5592

By:

Wölfer, Jan;
Nyakatura, John A.

Publication type:

Article

Developmental homoplasy: convergence in cellular differentiation.

Published in:

Journal of Anatomy, 2010, v. 216, n. 6, p. 651, doi. 10.1111/j.1469-7580.2010.01232.x

By:

Graham, Anthony

Publication type:

Article

Homoplasy corrected estimation of genetic similarity from AFLP bands, and the effect of the number of bands on the precision of estimation.

Published in:

Theoretical & Applied Genetics, 2009, v. 119, n. 3, p. 397, doi. 10.1007/s00122-009-1047-9

By:

Gort, Gerrit;
van Hintum, Theo;
van Eeuwijk, Fred

Publication type:

Article

Complex mutational patterns and size homoplasy at maize microsatellite loci.

Published in:

Theoretical & Applied Genetics, 2007, v. 115, n. 7, p. 981, doi. 10.1007/s00122-007-0625-y

By:

Lia, V. V.;
Bracco, M.;
Gottlieb, A. M.;
Poggio, L.;
Confalonieri, V. A.

Publication type:

Article

Amplified fragment length homoplasy: in silico analysis for model and non-model species.

Published in:

BMC Genomics, 2010, v. 11, p. 287, doi. 10.1186/1471-2164-11-287

By:

Paris, Margot;
Bonnes, Benjamin;
Ficetola, Gentile Francesco;
Poncet, Bénédicte N.;
Després, Laurence

Publication type:

Article

Extensive size homoplasy at a microsatellite locus in the Japanese bumblebee, Bombus diversus.

Published in:

Entomological Science, 2004, v. 7, n. 2, p. 189, doi. 10.1111/j.1479-8298.2004.00052.x

By:

Yokoyama, Jun;
Fukuda, Tatsuya;
Yokoyama, Akiko;
Nakajima, Maki

Publication type:

Article

A morphological supermatrix-based phylogeny for the Neotropical fish superfamily Anostomoidea (Ostariophysi: Characiformes): phylogeny, missing data and homoplasy.

Published in:

Cladistics, 2016, v. 32, n. 3, p. 276, doi. 10.1111/cla.12127

By:

Dillman, Casey B.;
Sidlauskas, Brian L.;
Vari, Richard P.

Publication type:

Article

Weighting against homoplasy improves phylogenetic analysis of morphological data sets.

Published in:

Cladistics, 2008, v. 24, n. 5, p. 758, doi. 10.1111/j.1096-0031.2008.00209.x

By:

Goloboff, Pablo A.;
Carpenter, James M.;
Arias, J. Salvador;
Esquivel, Daniel Rafael Miranda

Publication type:

Article

Countering concerted homoplasy

Published in:

Cladistics, 2003, v. 19, n. 2, p. 128, doi. 10.1111/j.1096-0031.2003.tb00300.x

By:

Harris, Simon R.;
Wilkinson, Mark;
Marques, Antonio C.

Publication type:

Article

Mosaic patterns of homoplasy accompany the parallel evolution of suspensory adaptations in the forelimb of tree sloths (Folivora: Xenarthra).

Published in:

Zoological Journal of the Linnean Society, 2021, v. 193, n. 2, p. 445, doi. 10.1093/zoolinnean/zlaa154

By:

Spear, Jeffrey K;
Williams, Scott A

Publication type:

Article

Osteological Variation among Extreme Morphological Forms in the Mexican Salamander Genus Chiropterotriton (Amphibia: Plethodontidae): Morphological Evolution And Homoplasy.

Published in:

PLoS ONE, 2015, v. 10, n. 6, p. 1, doi. 10.1371/journal.pone.0127248

By:

Darda, David M.;
Wake, David B.

Publication type:

Article

Whole-Genome Phylogenetic Reconstruction as a Powerful Tool to Reveal Homoplasy and Ancient Rapid Radiation in Waterflea Evolution.

Published in:

Systematic Biology, 2022, v. 71, n. 4, p. 777, doi. 10.1093/sysbio/syab094

By:

Damme, Kay Van;
Cornetti, Luca;
Fields, Peter D;
Ebert, Dieter

Publication type:

Article

True Homoplasy of Retrotransposon Insertions in Primates.

Published in:

Systematic Biology, 2019, v. 68, n. 3, p. 482, doi. 10.1093/sysbio/syy076

By:

Doronina, Liliya;
Reising, Olga;
Clawson, Hiram;
Ray, David A;
Schmitz, Jürgen

Publication type:

Article

Are Transposable Element Insertions Homoplasy Free?: An Examination Using the Avian Tree of Life.

Published in:

Systematic Biology, 2011, v. 60, n. 3, p. 375, doi. 10.1093/sysbio/syq100

By:

KIN-LAN HAN;
BRAUN, EDWARD L.;
KIMBALL, REBECCA T.;
REDDY, SUSHMA;
BOWIE, RAURI C. K.;
BRAUN, MICHAEL J.;
CHOJNOWSKI, JENA L.;
HACKETT, SHANNON J.;
Harshman, John;
Huddleston, Christopher J.;
Marks, Ben D.;
Miglia, Kathleen J.;
Moore, William S.;
Sheldon, Frederick H.;
Steadman, David W.;
Witt, Christopher C.;
Yuri, Tamaki

Publication type:

Article

Homoplasy and Clade Support.

Published in:

Systematic Biology, 2009, v. 58, n. 2, p. 184, doi. 10.1093/sysbio/syp019

By:

Brandley, Matthew C.;
Warren, Dan L.;
Leache, Adam D.;
McGuire, Jimmy A.

Publication type:

Article