Works matching Extrachromosomal DNA

Results: 768

Extrachromosomal Circular DNA: Current Knowledge and Implications for CNS Aging and Neurodegeneration.

Published in:

International Journal of Molecular Sciences, 2020, v. 21, n. 7, p. 2477, doi. 10.3390/ijms21072477

By:

Ain, Quratul;
Schmeer, Christian;
Wengerodt, Diane;
Witte, Otto W.;
Kretz, Alexandra

Publication type:

Article

Novel insights into extrachromosomal DNA: redefining the onco-drivers of tumor progression.

Published in:

Journal of Experimental & Clinical Cancer Research (17569966), 2020, v. 39, n. 1, p. N.PAG, doi. 10.1186/s13046-020-01726-4

By:

Gu, Xiang;
Yu, Jie;
Chai, Peiwei;
Ge, Shengfang;
Fan, Xianqun

Publication type:

Article

Current understanding of extrachromosomal circular DNA in cancer pathogenesis and therapeutic resistance.

Published in:

Journal of Hematology & Oncology, 2020, v. 13, n. 1, p. N.PAG, doi. 10.1186/s13045-020-00960-9

By:

Yan, Yuanliang;
Guo, Guijie;
Huang, Jinzhou;
Gao, Ming;
Zhu, Qian;
Zeng, Shuangshuang;
Gong, Zhicheng;
Xu, Zhijie

Publication type:

Article

Extrachromosomal DNA in Genome (in)Stability - Role of Telomeres.

Published in:

Croatica Chemica Acta, 2016, v. 89, n. 2, p. 175, doi. 10.5562/cca2841

By:

Nanić, Lucia;
Ravlić, Sanda;
Rubelj, Ivica

Publication type:

Article

New insight on the role of extrachromosomal retroviral DNA.

Published in:

1997

By:

Cara, A.;
Reitz, Jr., M. S.;
Reitz, M S Jr

Publication type:

journal article

The fate of extrachromosomal DNAs in the progeny of plastid-transformed tobacco plants.

Published in:

Plant Biotechnology Reports, 2015, v. 9, n. 6, p. 431, doi. 10.1007/s11816-015-0380-5

By:

Min, Sung;
Jung, Seo;
Liu, Jang;
Jeong, Won-Joong

Publication type:

Article

Complete set of extrachromosomal DNAs from three pathogenic lines of onion yellows phytoplasma and use of PCR to differentiate each line.

Published in:

Journal of General Plant Pathology, 2003, v. 69, n. 3, p. 194, doi. 10.1007/s10327-003-0035-1

By:

Nishigawa, Hisashi;
Oshima, Kenro;
Miyata, Shin-ichi;
Ugaki, Masashi;
Namba, Shigetou

Publication type:

Article

Extrachromosomal DNA‐mediated glyphosate resistance in Italian ryegrass.

Published in:

Pest Management Science, 2023, v. 79, n. 11, p. 4290, doi. 10.1002/ps.7626

By:

Koo, Dal‐Hoe;
Ju, Yoonha;
Putta, Karthik;
Sathishraj, Rajendran;
Roma‐Burgos, Nilda;
Jugulam, Mithila;
Friebe, Bernd;
Gill, Bikram S.

Publication type:

Article

Extrachromosomal circular DNA: a new potential role in cancer progression.

Published in:

2021

By:

Wang, Tianyi;
Zhang, Haijian;
Zhou, Youlang;
Shi, Jiahai

Publication type:

journal article

Characterization of extrachromosomal circular DNA in cattle using 676 whole genome sequencing datasets.

Published in:

Animal Genetics, 2022, v. 53, n. 6, p. 761, doi. 10.1111/age.13269

By:

Li, Fan;
Yang, Lv;
Han, Jiazheng;
Han, Xiaotao;
Peng, Lingwei;
Du, Yuqin;
Xia, Han;
Yang, Liguo;
Zhou, Yang

Publication type:

Article

Identification and Characterization of Extrachromosomal Circular DNA in Slimming Grass Carp.

Published in:

Biomolecules (2218-273X), 2024, v. 14, n. 9, p. 1045, doi. 10.3390/biom14091045

By:

He, Haobin;
Gao, Zihan;
Hu, Zehua;
Liang, Guanyu;
Huang, Yanhua;
Zhou, Meng;
Liang, Rishen;
Zhang, Kai

Publication type:

Article

Categorizing Extrachromosomal Circular DNA as Biomarkers in Serum of Cancer.

Published in:

Biomolecules (2218-273X), 2024, v. 14, n. 4, p. 488, doi. 10.3390/biom14040488

By:

Deng, Enze;
Fan, Xiaoying

Publication type:

Article

Plasma extrachromosomal circular DNA is a pathophysiological hallmark of short‐term intensive insulin therapy for type 2 diabetes.

Published in:

Clinical & Translational Medicine, 2023, v. 13, n. 10, p. 1, doi. 10.1002/ctm2.1437

By:

Xu, Zhe;
He, Junyu;
Han, Peng;
Dai, Peiji;
Lv, Wei;
Liu, Nian;
Liu, Liyi;
Liu, Liehua;
Pan, Xiaoguang;
Xiang, Xi;
Li, Hanbo;
Ge, Fangfang;
Gao, Shan;
Liao, Zhihong;
Luo, Yonglun;
Li, Yanbing

Publication type:

Article

Small extrachromosomal circular DNAs as biomarkers for multi‐cancer diagnosis and monitoring.

Published in:

Clinical & Translational Medicine, 2023, v. 13, n. 9, p. 1, doi. 10.1002/ctm2.1393

By:

Luo, Xuanmei;
Zhang, Lili;
Cui, Jian;
An, Qi;
Li, Hexin;
Zhang, Zaifeng;
Sun, Gaoyuan;
Huang, Wei;
Li, Yifei;
Li, Chang;
Jia, Wenzhuo;
Zou, Lihui;
Zhao, Gang;
Xiao, Fei

Publication type:

Article

Extrachromosomal circular DNA in cancer drug resistance and its potential clinical implications.

Published in:

Frontiers in Oncology, 2023, v. 13, p. 1, doi. 10.3389/fonc.2022.1092705

By:

Juanjuan Luo;
Ying Li;
Tangxuan Zhang;
Tianhan Xv;
Chao Chen;
Mengting Li;
Qixiang Qiu;
Yusheng Song;
Shaogui Wan

Publication type:

Article

DeepECD: A model for predicting plant extrachromosomal circular DNA from sequences.

Published in:

Journal of Biotech Research, 2024, v. 16, p. 345

By:

Jiming Hu;
Zhongzhen Tang;
Yongzhen Wang;
Jun Yan;
Xiaoyong Sun

Publication type:

Article

Gene Amplification and the Extrachromosomal Circular DNA.

Published in:

Genes, 2021, v. 12, n. 10, p. 1533, doi. 10.3390/genes12101533

By:

Shimizu, Noriaki

Publication type:

Article

Extrachromosomal DNA amplicons in antimalarial‐resistant Plasmodium falciparum.

Published in:

Molecular Microbiology, 2021, v. 115, n. 4, p. 574, doi. 10.1111/mmi.14624

By:

McDaniels, Jennifer M.;
Huckaby, Adam C.;
Carter, Sabrina A.;
Lingeman, Sabrina;
Francis, Audrey;
Congdon, Molly;
Santos, Webster;
Rathod, Pradipsinh K.;
Guler, Jennifer L.

Publication type:

Article

Integrating Circle-Seq with transcriptomics reveals genome-wide characterization of extrachromosomal circular DNA for dilated cardiomyopathy.

Published in:

Biology Direct, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13062-024-00556-0

By:

Lin, Zhenhao;
Dai, Fangjie;
Li, Bo;
Zhao, Yongchao;
Wang, Changqian

Publication type:

Article

Predicting gestational diabetes mellitus risk at 11–13 weeks' gestation: the role of extrachromosomal circular DNA.

Published in:

Cardiovascular Diabetology, 2024, v. 23, n. 1, p. 1, doi. 10.1186/s12933-024-02381-1

By:

Wang, Jin;
Huang, Pengyu;
Hou, Fei;
Hao, Dongdong;
Li, Wushan;
Jin, Hua

Publication type:

Article

Small extrachromosomal circular DNA (eccDNA): major functions in evolution and cancer.

Published in:

Molecular Cancer, 2021, v. 20, n. 1, p. 1, doi. 10.1186/s12943-021-01413-8

By:

Ling, Xiaoxuan;
Han, Yali;
Meng, Jinxue;
Zhong, Bohuan;
Chen, Jialong;
Zhang, He;
Qin, Jiheng;
Pang, Jing;
Liu, Linhua

Publication type:

Article

Cell-Free Genic Extrachromosomal Circular DNA Profiles of DNase Knockouts Associated with Systemic Lupus Erythematosus and Relation with Common Fragile Sites.

Published in:

Biomedicines, 2024, v. 12, n. 1, p. 80, doi. 10.3390/biomedicines12010080

By:

Gerovska, Daniela;
Fernández Moreno, Patricia;
Zabala, Aitor;
Araúzo-Bravo, Marcos J.

Publication type:

Article

Extrachromosomal circular DNA containing DTX1 promotes cell growth in hydroquinone-induced malignantly transformed cells by regulating the transcription of DTX1.

Published in:

BMC Cancer, 2024, v. 24, n. 1, p. 1, doi. 10.1186/s12885-024-13177-7

By:

Ling, Xiaoxuan;
Jiao, Qunfang;
Lin, Daifan;
Chen, Jialong;
Han, Yali;
Meng, Jinxue;
Zhong, Bohuan;
Zhang, He;
Zhang, Gongda;
Zhu, Fangling;
Qin, Jiheng;
Ruan, Yongdui;
Liu, Linhua

Publication type:

Article

Gene amplifications and extrachromosomal circular DNAs: function and biogenesis.

Published in:

Molecular Biology Reports, 2023, v. 50, n. 9, p. 7693, doi. 10.1007/s11033-023-08649-1

By:

Yüksel, Ali;
Altungöz, Oğuz

Publication type:

Article

Beyond the Chromosome: Recent Developments in Decoding the Significance of Extrachromosomal Circular DNA (eccDNA) in Human Malignancies.

Published in:

Life (2075-1729), 2024, v. 14, n. 8, p. 922, doi. 10.3390/life14080922

By:

Tsiakanikas, Panagiotis;
Athanasopoulou, Konstantina;
Darioti, Ioanna A.;
Agiassoti, Vasiliki Taxiarchoula;
Theocharis, Stamatis;
Scorilas, Andreas;
Adamopoulos, Panagiotis G.

Publication type:

Article

Extrachromosomal circular DNA derived from tandemly repeated genomic sequences in plants.

Published in:

Plant Journal, 2008, v. 53, n. 6, p. 1027, doi. 10.1111/j.1365-313X.2007.03394.x

By:

Cohen, Sarit;
Houben, Andreas;
Segal, Daniel

Publication type:

Article

The extrachromosomal circular DNAs of the rice blast pathogen Magnaporthe oryzae contain a wide variety of LTR retrotransposons, genes, and effectors.

Published in:

BMC Biology, 2022, v. 20, n. 1, p. 1, doi. 10.1186/s12915-022-01457-2

By:

Joubert, Pierre M.;
Krasileva, Ksenia V.

Publication type:

Article

Unveiling the mysteries of extrachromosomal circular DNA: from generation to clinical relevance in human cancers and health.

Published in:

Molecular Cancer, 2024, v. 23, n. 1, p. 1, doi. 10.1186/s12943-024-02187-5

By:

Wang, Zilong;
Yu, Jiaying;
Zhu, Wenli;
Hong, Xiaoning;
Xu, Zhen;
Mao, Shuang;
Huang, Lei;
Han, Peng;
He, Chunxiao;
Song, Changze;
Xiang, Xi

Publication type:

Article

Integrative profiling of extrachromosomal circular DNA in placenta and maternal plasma provides insights into the biology of fetal growth restriction and reveals potential biomarkers.

Published in:

Frontiers in Genetics, 2023, p. 1, doi. 10.3389/fgene.2023.1128082

By:

Minhuan Lin;
Yiqing Chen;
Shuting Xia;
Zhiming He;
Xuegao Yu;
Linhuan Huang;
Shaobin Lin;
Binrun Liang;
Ziliang Huang;
Shiqiang Mei;
Dong Liu;
Lingling Zheng;
Yanmin Luo

Publication type:

Article

Identification and characterization of extrachromosomal circular DNA in alcohol induced osteonecrosis of femoral head.

Published in:

Frontiers in Genetics, 2022, v. 13, p. 1, doi. 10.3389/fgene.2022.918379

By:

Tingting Zhou;
Shiqiang Ma;
Yunchao Zhao;
Donghui Guo;
Hengjun Wang;
Mingjie Kuang;
Xiaoming Li

Publication type:

Article

Progress on the role of extrachromosomal DNA in tumor pathogenesis and evolution.

Published in:

Clinical Genetics, 2021, v. 99, n. 4, p. 503, doi. 10.1111/cge.13896

By:

Xing, Jichen;
Ning, Qian;
Tang, Diya;
Mo, Zhongcheng;
Lei, Xiaoyong;
Tang, Shengsong

Publication type:

Article

Genome-wide sequencing identified extrachromosomal circular DNA as a transcription factor-binding motif of the senescence genes that govern replicative senescence in human mesenchymal stem cells.

Published in:

Frontiers in Cellular Neuroscience, 2024, p. 1, doi. 10.3389/fncel.2024.1421342

By:

Wei Yang;
Wei Ji;
Boyu Liao;
Zhongbo Li;
Jian Wang;
Haishu Lin;
Jingbo Wang;
Qian He

Publication type:

Article

Revisiting characteristics of oncogenic extrachromosomal DNA as mobile enhancers on neuroblastoma and glioma cancers.

Published in:

2022

By:

Karami Fath, Mohsen;
Karimfar, Nastaran;
Fazlollahpour Naghibi, Andarz;
Shafa, Shahriyar;
Ghasemi Shiran, Melika;
Ataei, Mehran;
Dehghanzadeh, Hossein;
Nabi Afjadi, Mohsen;
Ghadiri, Tahereh;
Payandeh, Zahra;
Tarhriz, Vahideh

Publication type:

Literature Review

Exploring the Role of Extrachromosomal Circular DNA in Human Diseases.

Published in:

Cytogenetic & Genome Research, 2024, v. 164, n. 5/6, p. 181, doi. 10.1159/000541563

By:

Peng, Yali;
Tao, Huihui;
Wang, Guoying;
Wu, Mengyao;
Xu, Tinatin;
Wen, Chunmei;
Zheng, Xuejia;
Dai, Yong

Publication type:

Article

Characterization, biogenesis model, and current bioinformatics of human extrachromosomal circular DNA.

Published in:

Frontiers in Genetics, 2024, p. 01, doi. 10.3389/fgene.2024.1385150

By:

Lina Zhou;
Wenyi Tang;
Bo Ye;
Lingyun Zou

Publication type:

Article

Comprehensive landscape and oncogenic role of extrachromosomal circular DNA in malignant biliary strictures.

Published in:

Cell & Bioscience, 2025, v. 15, n. 1, p. 1, doi. 10.1186/s13578-025-01361-6

By:

Cheng, Zhuo;
Luo, Xuanmei;
Liu, Wenzheng;
Lu, Xiaofang;
Chang, Hong;
Wang, Yingchun;
Zheng, Wei;
Yan, Xiue;
Huang, Yonghui

Publication type:

Article

Deciphering the role of extrachromosomal circular DNA in adipose stem cells from old and young donors.

Published in:

Stem Cell Research & Therapy, 2023, v. 14, n. 1, p. 1, doi. 10.1186/s13287-023-03575-2

By:

Ren, Sen;
Wu, Du;
Shen, Xiaoyong;
Wu, Qian;
Li, Chengcheng;
Xiong, Hewei;
Xiong, Zhongwei;
Gong, Rui;
Liu, Zheng;
Wang, Wei;
Chen, Jincao

Publication type:

Article

TeCD: The eccDNA Collection Database for extrachromosomal circular DNA.

Published in:

BMC Genomics, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s12864-023-09135-5

By:

Guo, Jing;
Zhang, Ze;
Li, Qingcui;
Chang, Xiao;
Liu, Xiaoping

Publication type:

Article

Extrachromosomal circular DNAs in prostate adenocarcinoma: global characterizations and a novel prediction model.

Published in:

Frontiers in Pharmacology, 2024, p. 1, doi. 10.3389/fphar.2024.1464145

By:

Qingliu He;
Qingfu Su;
Chengcheng Wei;
Pu Zhang;
Weihui Liu;
Junyi Chen;
Xiaoping Su;
Wei Zhuang

Publication type:

Article

ECCsplorer: a pipeline to detect extrachromosomal circular DNA (eccDNA) from next-generation sequencing data.

Published in:

BMC Bioinformatics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12859-021-04545-2

By:

Mann, Ludwig;
Seibt, Kathrin M.;
Weber, Beatrice;
Heitkam, Tony

Publication type:

Article

Characterization of extrachromosomal circular DNAs in plasma of patients with clear cell renal cell carcinoma.

Published in:

World Journal of Urology, 2024, v. 42, n. 1, p. 1, doi. 10.1007/s00345-024-05031-z

By:

Li, Qing;
Zhang, Rui-Xuan;
Yang, Jing-Jing;
Huang, Hou-Bao;
Feng, Gang;
Li, Guo-Rong

Publication type:

Article

Leveraging AI to automate detection and quantification of extrachromosomal DNA to decode drug responses.

Published in:

Frontiers in Pharmacology, 2025, p. 1, doi. 10.3389/fphar.2024.1516621

By:

Goble, Kohen;
Mehta, Aarav;
Guilbaud, Damien;
Fessler, Jacob;
Chen, Jingting;
Nenad, William;
Ford, Christina G.;
Cope, Oliver;
Cheng, Darby;
Dennis, William;
Gurumurthy, Nithya;
Wang, Yue;
Shukla, Kriti;
Brunk, Elizabeth

Publication type:

Article

Circle‐Seq reveals genomic and disease‐specific hallmarks in urinary cell‐free extrachromosomal circular DNAs.

Published in:

Clinical & Translational Medicine, 2022, v. 12, n. 4, p. 1, doi. 10.1002/ctm2.817

By:

Lv, Wei;
Pan, Xiaoguang;
Han, Peng;
Wang, Ziyu;
Feng, Weijia;
Xing, Xue;
Wang, Qingqing;
Qu, Kunli;
Zeng, Yuchen;
Zhang, Cailin;
Xu, Zhe;
Li, Yi;
Zheng, Tianyu;
Lin, Ling;
Liu, Chengxun;
Liu, Xuemei;
Li, Hanbo;
Henriksen, Rasmus Amund;
Bolund, Lars;
Lin, Lin

Publication type:

Article

Extrachromosomal DNA amplicons in antimalarial‐resistant Plasmodium falciparum.

Published in:: Molecular Microbiology, 2021, v. 116, n. 1, p. 359, doi. 10.1111/mmi.14766
Publication type:: Article

Extrachromosomal DNA: New players in oncology.

Published in:

Asian Journal of Medical Sciences, 2024, v. 15, n. 10, p. 1, doi. 10.3126/ajms.v15i10.69596

By:

Dhar, Ruby;
Kumar, Arun;
Karmakar, Subhradip

Publication type:

Article

Small extrachromosomal circular DNA harboring targeted tumor suppressor gene mutations supports intratumor heterogeneity in mouse liver cancer induced by multiplexed CRISPR/Cas9.

Published in:

Genome Medicine, 2023, v. 15, n. 1, p. 1, doi. 10.1186/s13073-023-01230-2

By:

Guo, Tao;
Chen, Guo-Qiao;
Li, Xu-Fan;
Wang, Meng;
Liu, Kun-Ming;
Yang, Xiao-Ying;
Liu, Si-Cheng;
Feng, Yi-Li;
Liu, Peng-Yuan;
Lin, Hui;
Xie, An-Yong

Publication type:

Article

Formation of Extrachromosomal Circular DNA from Long Terminal Repeats of Retrotransposons in Saccharomyces cerevisiae.

Published in:

G3: Genes | Genomes | Genetics, 2016, v. 6, n. 2, p. 453, doi. 10.1534/g3.115.025858

By:

Møller, Henrik D.;
Larsen, Camilla E.;
Parsons, Lance;
Hansen, Anders Johannes;
Regenberg, Birgitte;
Mourier, Tobias

Publication type:

Article

Formation of Complex Extrachromosomal T-DNA Structures in Agrobacterium tumefaciens-Infected Plants.

Published in:

Plant Physiology, 2012, v. 160, n. 1, p. 511, doi. 10.1104/pp.112.200212

By:

Singer, Kamy;
Shiboleth, Yoel M.;
Jianming Li;
Tzfira, Tzvi

Publication type:

Article

The extrachromosomal circular DNA atlas of aged and young mouse brains.

Published in:

Scientific Data, 2024, v. 11, n. 1, p. 1, doi. 10.1038/s41597-024-03146-x

By:

Hong, Xiaoning;
Li, Jing;
Han, Peng;
Li, Shaofu;
Yu, Jiaying;
Zhang, Haoran;
Li, Jiang;
Dang, Yonghui;
Xiang, Xi

Publication type:

Article

Transcription-induced formation of extrachromosomal DNA during yeast ageing.

Published in:

PLoS Biology, 2019, v. 17, n. 12, p. 1, doi. 10.1371/journal.pbio.3000471

By:

Hull, Ryan M.;
King, Michelle;
Pizza, Grazia;
Krueger, Felix;
Vergara, Xabier;
Houseley, Jonathan

Publication type:

Article