Works matching Epistasis

Results: 4222

Epistasis Analysis Goes Genome-Wide.

Published in:

PLoS Genetics, 2017, v. 13, n. 2, p. 1, doi. 10.1371/journal.pgen.1006558

By:

Zhang, Jianzhi

Publication type:

Article

Epistasis and Entropy.

Published in:

PLoS Genetics, 2016, v. 12, n. 12, p. 1, doi. 10.1371/journal.pgen.1006322

By:

Crona, Kristina

Publication type:

Article

Shared Information between Residues Is Sufficient to Detect Pairwise Epistasis in a Protein.

Published in:

2016

By:

Gupta, Aditi;
Adami, Christoph

Publication type:

Opinion

Survival of the Curviest: Noise-Driven Selection for Synergistic Epistasis.

Published in:

PLoS Genetics, 2016, v. 12, n. 4, p. 1, doi. 10.1371/journal.pgen.1006003

By:

Wilkins, Jon F.;
McHale, Peter T.;
Gervin, Joshua;
Lander, Arthur D.

Publication type:

Article

Epistasis in genomic and survival data of cancer patients.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 7, p. 1, doi. 10.1371/journal.pcbi.1005626

By:

Matlak, Dariusz;
Szczurek, Ewa

Publication type:

Article

High-order epistasis shapes evolutionary trajectories.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 5, p. 1, doi. 10.1371/journal.pcbi.1005541

By:

Sailer, Zachary R.;
Harms, Michael J.

Publication type:

Article

Genomic prediction with epistasis models: on the marker-coding-dependent performance of the extended GBLUP and properties of the categorical epistasis model (CE).

Published in:

BMC Bioinformatics, 2017, v. 18, p. 1, doi. 10.1186/s12859-016-1439-1

By:

Martini, Johannes W. R.;
Ning Gao;
Cardoso, Diercles F.;
Wimmer, Valentin;
Erbe, Malena;
Cantet, Rodolfo J. C.;
Simianer, Henner

Publication type:

Article

Detecting epistasis with the marginal epistasis test in genetic mapping studies of quantitative traits.

Published in:

PLoS Genetics, 2017, v. 13, n. 7, p. 1, doi. 10.1371/journal.pgen.1006869

By:

Crawford, Lorin;
Zeng, Ping;
Mukherjee, Sayan;
Zhou, Xiang

Publication type:

Article

Evolutionary footprint of epistasis.

Published in:

PLoS Computational Biology, 2018, v. 14, n. 9, p. 1, doi. 10.1371/journal.pcbi.1006426

By:

Pedruzzi, Gabriele;
Barlukova, Ayuna;
Rouzine, Igor M.

Publication type:

Article

Long-Range Epistasis Mediated by Structural Change in a Model of Ligand Binding Proteins.

Published in:

PLoS ONE, 2016, v. 11, n. 11, p. 1, doi. 10.1371/journal.pone.0166739

By:

Nelson, Erik D.;
Grishin, Nick V.

Publication type:

Article

PERSPECTIVE: SIGN EPISTASIS AND GENETIC CONSTRAINT ON EVOLUTIONARY TRAJECTORIES.

Published in:

Evolution, 2005, v. 59, n. 6, p. 1165, doi. 10.1554/04-272

By:

Weinreich, Daniel M.;
Watson, Richard A.;
Lin Chao;
Harrison, R.

Publication type:

Article

Characterizing gene-gene interactions in a statistical epistasis network of twelve candidate genes for obesity.

Published in:

BioData Mining, 2015, v. 8, p. 1, doi. 10.1186/s13040-015-0077-x

By:

De, Rishika;
Ting Hu;
Moore, Jason H.;
Gilbert-Diamond, Diane

Publication type:

Article

Functional dyadicity and heterophilicity of gene-gene interactions in statistical epistasis networks.

Published in:

BioData Mining, 2015, v. 8, p. 1, doi. 10.1186/s13040-015-0062-4

By:

Ting Hu;
Andrew, Angeline S.;
Karagas, Margaret R.;
Moore, Jason H.

Publication type:

Article

Mechanistic causes of sign epistasis and its applications.

Published in:

Frontiers in Genetics, 2024, p. 01, doi. 10.3389/fgene.2024.1366917

By:

Jinqiu Zhang;
Feiyu Chen;
Xianghua Li

Publication type:

Article

Epistasis in an Andean × Mesoamerican cross of common bean.

Published in:

Euphytica, 2012, v. 186, n. 3, p. 755, doi. 10.1007/s10681-011-0578-8

By:

Moreto, Alexsander;
Ramalho, Magno;
Bruzi, Adriano

Publication type:

Article

Epistasis and complementary gene action adequately account for the genetic bases of transgressive segregation of kilo-grain weight in rice.

Published in:

Euphytica, 2011, v. 180, n. 2, p. 261, doi. 10.1007/s10681-011-0395-0

By:

Donghai Mao;
Touming Liu;
Caiguo Xu;
Xianghua Li;
Yongzhong Xing

Publication type:

Article

Epistasis among the three major flowering time genes in rice: coordinate changes of photoperiod sensitivity, basic vegetative growth and optimum photoperiod.

Published in:

Euphytica, 2008, v. 163, n. 2, p. 167, doi. 10.1007/s10681-007-9584-2

By:

Uwatoko, Naohiro;
Onishi, Atsushi;
Ikeda, Yuji;
Kontani, Manabu;
Sasaki, Atsushi;
Matsubara, Kazuki;
Itoh, Youki;
Sano, Yoshio

Publication type:

Article

Within-family genetic variation and epistasis in cassava ( Manihot esculenta Crantz) adapted to the acid-soils environment.

Published in:

Euphytica, 2005, v. 145, n. 1/2, p. 77, doi. 10.1007/s10681-005-0424-y

By:

Perez, J. C.;
Ceballos, H.;
Calle, F.;
Morante, N.;
Gaitán, W.;
Llano, G.;
Alvarez, E.

Publication type:

Article

Synergistic epistasis and alternative hypotheses.

Published in:

Journal of Evolutionary Biology, 2004, v. 17, n. 6, p. 1400, doi. 10.1111/j.1420-9101.2004.00755.x

By:

Trouve, S.;
Ding, A.;
Goudet, J.

Publication type:

Article

Evidence for epistasis: reply to Trouveet al.

Published in:

Journal of Evolutionary Biology, 2004, v. 17, n. 6, p. 1402, doi. 10.1111/j.1420-9101.2004.00803.x

By:

Ebert, D.;
Salathé, P.;
Kawecki, T. J.

Publication type:

Article

Epistasis affecting litter size in mice.

Published in:

Journal of Evolutionary Biology, 2004, v. 17, n. 3, p. 593, doi. 10.1111/j.1420-9101.2004.00702.x

By:

Peripato, A. C.;
De Brito, R. A.;
Matioli, S. A.;
L. S. Pletscher, S. A.;
Vaughn, T. T.;
Cheveaud, J. M.

Publication type:

Article

A gene's eye view of epistasis, selection and speciation.

Published in:

Journal of Evolutionary Biology, 2002, v. 15, n. 3, p. 337, doi. 10.1046/j.1420-9101.2002.00413.x

By:

Wade, M. J

Publication type:

Article

Additive and Epistasis Effects of Quantitative Trait Loci for Plant Height and Its Components in Single Segment Substitution Lines of Rice

Published in:

Acta Agronomica Sinica / Zuowu Xuebao, 2009, v. 35, n. 1, p. 48, doi. 10.1016/S1875-2780(08)60054-1

By:

ZHAO, Fang-Ming;
ZHANG, Gui-Quan;
ZENG, Rui-Zhen;
YANG, Zeng-Lin;
ZHU, Hai-Tao;
ZHONG, Bing-Qiang;
LIN, Ying-Hua;
HE, Guang-Hua

Publication type:

Article

wtest: an integrated R package for genetic epistasis testing.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 9, p. 1, doi. 10.1186/s12920-019-0638-9

By:

Sun, Rui;
Xia, Xiaoxuan;
Chong, Ka Chun;
Zee, Benny Chung-Ying;
Wu, William Ka Kei;
Wang, Maggie Haitian

Publication type:

Article

The biological basis of epistasis between quantitative trait loci for flavone and 3-deoxyanthocyanin synthesis in maize (Zea mays L.).

Published in:

Genome, 2001, v. 44, n. 4, p. 667, doi. 10.1139/g01-061

By:

McMullen, Michael D;
Snook, Maurice;
Lee, Elizabeth A;
Byrne, Patrick F;
Kross, Heike;
Musket, Theresa A;
Houchins, Katherine;
Coe, Jr., Edward H

Publication type:

Article

Genome-wide association and epistasis studies reveal the genetic basis of saline-alkali tolerance at the germination stage in rice.

Published in:

Frontiers in Plant Science, 2023, p. 1, doi. 10.3389/fpls.2023.1170641

By:

Guogen Zhang;
Zhiyuan Bi;
Jing Jiang;
Jingbing Lu;
Keyang Li;
Di Bai;
Xinchen Wang;
Xueyu Zhao;
Min Li;
Xiuqin Zhao;
Wensheng Wang;
Jianlong Xu;
Zhikang Li;
Fan Zhang;
Yingyao Shi

Publication type:

Article

A survey about methods dedicated to epistasis detection.

Published in:

Frontiers in Genetics, 2015, p. 1, doi. 10.3389/fgene.2015.00285

By:

Niel, Clément;
Sinoquet, Christine;
Dina, Christian;
Rocheleau, Ghislain;
Jingyi Jessica Li;
Xiaodan Fan

Publication type:

Article

Estimating directional epistasis.

Published in:

Frontiers in Genetics, 2014, v. 5, p. 1, doi. 10.3389/fgene.2014.00198

By:

Le Rouzic, Arnaud

Publication type:

Article

Estimating directional epistasis.

Published in:

Frontiers in Genetics, 2014, v. 5, p. 1, doi. 10.3389/fgene.2014.00198

By:

Le Rouzic, Arnaud

Publication type:

Article

A Novel Two-Stage Approach for Epistasis Detection in Genome-Wide Case-Control Studies.

Published in:

Biochemical Genetics, 2014, v. 52, n. 9/10, p. 403, doi. 10.1007/s10528-014-9656-7

By:

Liao, Zhongli;
Zeng, Qingguang;
Liao, Bo;
Li, Xiong

Publication type:

Article

Epistasis analysis of microRNAs on pathological stages in colon cancer based on an Empirical Bayesian Elastic Net method.

Published in:

BMC Genomics, 2017, v. 18, p. 21, doi. 10.1186/s12864-017-4130-7

By:

Jia Wen;
Quitadamo, Andrew;
Hall, Benika;
Xinghua Shi

Publication type:

Article

Reverse Pathway Genetic Approach Identifies Epistasis in Autism Spectrum Disorders.

Published in:

PLoS Genetics, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pgen.1006516

By:

Mitra, Ileena;
Lavillaureix, Alinoë;
Yeh, Erika;
Traglia, Michela;
Tsang, Kathryn;
Bearden, Carrie E.;
Rauen, Katherine A.;
Weiss, Lauren A.

Publication type:

Article

Functional Regression Models for Epistasis Analysis of Multiple Quantitative Traits.

Published in:

PLoS Genetics, 2016, v. 12, n. 4, p. 1, doi. 10.1371/journal.pgen.1005965

By:

Zhang, Futao;
Xie, Dan;
Liang, Meimei;
Xiong, Momiao

Publication type:

Article

Detecting genetic epistasis by differential departure from independence.

Published in:

Molecular Genetics & Genomics, 2022, v. 297, n. 4, p. 911, doi. 10.1007/s00438-022-01893-3

By:

Sharma, Ruby;
Sadeghian Tehrani, Zeinab;
Kumar, Sajal;
Song, Mingzhou

Publication type:

Article

Epistasis × environment interactions among Arabidopsis thaliana glucosinolate genes impact complex traits and fitness in the field.

Published in:

New Phytologist, 2017, v. 215, n. 3, p. 1249, doi. 10.1111/nph.14646

By:

Kerwin, Rachel E.;
Feusier, Julie;
Muok, Alise;
Lin, Catherine;
Larson, Brandon;
Copeland, Daniel;
Corwin, Jason A.;
Rubin, Matthew J.;
Francisco, Marta;
Li, Baohua;
Joseph, Bindu;
Weinig, Cynthia;
Kliebenstein, Daniel J.

Publication type:

Article

Wright was right: leveraging old data and new methods to illustrate the critical role of epistasis in genetics and evolution.

Published in:

Evolution, 2024, v. 78, n. 4, p. 624, doi. 10.1093/evolut/qpae003

By:

Burch, Jorja;
Chin, Maximos;
Fontenot, Brian E;
Mandal, Sabyasachi;
McKnight, Thomas D;
Demuth, Jeffery P;
Blackmon, Heath

Publication type:

Article

Parallel emergence of negative epistasis across experimental lineages.

Published in:

Evolution, 2017, v. 71, n. 4, p. 1088, doi. 10.1111/evo.13190

By:

Zee, Peter C.;
Velicer, Gregory J.

Publication type:

Article

FDHE-IW: A Fast Approach for Detecting High-Order Epistasis in Genome-Wide Case-Control Studies.

Published in:

Genes, 2018, v. 9, n. 9, p. 435, doi. 10.3390/genes9090435

By:

Tuo, Shouheng

Publication type:

Article

Mapping QTLs with digenic epistasis under multiple environments and predicting heterosis based on QTL effects.

Published in:

Theoretical & Applied Genetics, 2007, v. 115, n. 3, p. 325, doi. 10.1007/s00122-007-0564-7

By:

Yong-Ming Gao;
Jun Zhu

Publication type:

Article

Genetic basis and mapping of the resistance to Rice yellow mottle virus. III. Analysis of QTL efficiency in introgressed progenies confirmed the hypothesis of complementary epistasis between two resistance QTLs.

Published in:

Theoretical & Applied Genetics, 2001, v. 103, n. 6/7, p. 1084, doi. 10.1007/s001220100642

By:

Ahmadi, N.;
Albar, L.;
Pressoir, G.;
Pinel, A.;
Fargette, D.;
Ghesquière, A.

Publication type:

Article

Functional Variants in the Catalase and Myeloperoxidase Genes, Ambient Air Pollution, and Respiratory-related School Absences: An Example of Epistasis in Gene-Environment Interactions.

Published in:

American Journal of Epidemiology, 2009, v. 170, n. 12, p. 1494, doi. 10.1093/aje/kwp310

By:

Wenten, Madé;
Gauderman, W. James;
Berhane, Kiros;
Pi-Chu Lin;
Peters, John;
Gilliland, Frank D.

Publication type:

Article

Detection and characterization of epistasis between QTLs on plant height in rice using single segment substitution lines.

Published in:

Breeding Science, 2015, v. 65, n. 3, p. 192, doi. 10.1270/jsbbs.65.192

By:

Haitao Zhu;
Ziqiang Liu;
Xuelin Fu;
Ziju Dai;
Shaokui Wang;
Guiquan Zhang;
Ruizhen Zeng;
Guifu Liu

Publication type:

Article

Studying the genetic basis of ecological interactions with intergenomic epistasis.

Published in:

Oikos, 2025, v. 2025, n. 6, p. 1, doi. 10.1111/oik.10835

By:

Hablützel, Loraine;
Bank, Claudia

Publication type:

Article

Epistasis and the Evolution of Antimicrobial Resistance.

Published in:

Frontiers in Microbiology, 2017, v. 8, p. 1, doi. 10.3389/fmicb.2017.00246

By:

Alex Wong

Publication type:

Article

Genomic Prediction of Genotypic Effects with Epistasis and Environment Interactions for Yield-Related Traits of Rapeseed (Brassica napus L.).

Published in:

Frontiers in Genetics, 2017, v. 8, p. 1, doi. 10.3389/fgene.2017.00015

By:

Xiang Luo;
Yi Ding;
Linzhong Zhang;
Yao Yue;
Snyder, John H.;
Chaozhi Ma;
Jun Zhu

Publication type:

Article

Shadows of complexity: what biological networks reveal about epistasis and pleiotropy.

Published in:

2009

By:

Tyler, Anna L.;
Asselbergs, Folkert W.;
Williams, Scott M.;
Moore, Jason H.

Publication type:

Essay

Mutation and Epistasis in Influenza Virus Evolution.

Published in:

Viruses (1999-4915), 2018, v. 10, n. 8, p. 407, doi. 10.3390/v10080407

By:

Lyons, Daniel M.;
Lauring, Adam S.

Publication type:

Article

Eigen-Epistasis for detecting gene-gene interactions.

Published in:

BMC Bioinformatics, 2017, v. 18, p. 1, doi. 10.1186/s12859-017-1488-0

By:

Stanislas, Virginie;
Dalmasso, Cyril;
Ambroise, Christophe

Publication type:

Article

Widespread epistasis regulates glucose homeostasis and gene expression.

Published in:

PLoS Genetics, 2017, v. 13, n. 9, p. 1, doi. 10.1371/journal.pgen.1007025

By:

Chen, Anlu;
Liu, Yang;
Williams, Scott M.;
Morris, Nathan;
Buchner, David A.

Publication type:

Article

Privacy-preserving decision tree for epistasis detection.

Published in:

Cybersecurity (2523-3246), 2019, v. 2, n. 1, p. N.PAG, doi. 10.1186/s42400-019-0025-z

By:

Chen, Qingfeng;
Zhang, Xu;
Zhang, Ruchang

Publication type:

Article