Works matching Epistasis

Results: 4222

Epistasis in genomic and survival data of cancer patients.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 7, p. 1, doi. 10.1371/journal.pcbi.1005626

By:

Matlak, Dariusz;
Szczurek, Ewa

Publication type:

Article

High-order epistasis shapes evolutionary trajectories.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 5, p. 1, doi. 10.1371/journal.pcbi.1005541

By:

Sailer, Zachary R.;
Harms, Michael J.

Publication type:

Article

Long-Range Epistasis Mediated by Structural Change in a Model of Ligand Binding Proteins.

Published in:

PLoS ONE, 2016, v. 11, n. 11, p. 1, doi. 10.1371/journal.pone.0166739

By:

Nelson, Erik D.;
Grishin, Nick V.

Publication type:

Article

Epistasis and Entropy.

Published in:

PLoS Genetics, 2016, v. 12, n. 12, p. 1, doi. 10.1371/journal.pgen.1006322

By:

Crona, Kristina

Publication type:

Article

Shared Information between Residues Is Sufficient to Detect Pairwise Epistasis in a Protein.

Published in:

2016

By:

Gupta, Aditi;
Adami, Christoph

Publication type:

Opinion

Survival of the Curviest: Noise-Driven Selection for Synergistic Epistasis.

Published in:

PLoS Genetics, 2016, v. 12, n. 4, p. 1, doi. 10.1371/journal.pgen.1006003

By:

Wilkins, Jon F.;
McHale, Peter T.;
Gervin, Joshua;
Lander, Arthur D.

Publication type:

Article

Characterizing gene-gene interactions in a statistical epistasis network of twelve candidate genes for obesity.

Published in:

BioData Mining, 2015, v. 8, p. 1, doi. 10.1186/s13040-015-0077-x

By:

De, Rishika;
Ting Hu;
Moore, Jason H.;
Gilbert-Diamond, Diane

Publication type:

Article

Functional dyadicity and heterophilicity of gene-gene interactions in statistical epistasis networks.

Published in:

BioData Mining, 2015, v. 8, p. 1, doi. 10.1186/s13040-015-0062-4

By:

Ting Hu;
Andrew, Angeline S.;
Karagas, Margaret R.;
Moore, Jason H.

Publication type:

Article

Genomic prediction with epistasis models: on the marker-coding-dependent performance of the extended GBLUP and properties of the categorical epistasis model (CE).

Published in:

BMC Bioinformatics, 2017, v. 18, p. 1, doi. 10.1186/s12859-016-1439-1

By:

Martini, Johannes W. R.;
Ning Gao;
Cardoso, Diercles F.;
Wimmer, Valentin;
Erbe, Malena;
Cantet, Rodolfo J. C.;
Simianer, Henner

Publication type:

Article

Mechanistic causes of sign epistasis and its applications.

Published in:

Frontiers in Genetics, 2024, p. 01, doi. 10.3389/fgene.2024.1366917

By:

Jinqiu Zhang;
Feiyu Chen;
Xianghua Li

Publication type:

Article

Evolutionary footprint of epistasis.

Published in:

PLoS Computational Biology, 2018, v. 14, n. 9, p. 1, doi. 10.1371/journal.pcbi.1006426

By:

Pedruzzi, Gabriele;
Barlukova, Ayuna;
Rouzine, Igor M.

Publication type:

Article

PERSPECTIVE: SIGN EPISTASIS AND GENETIC CONSTRAINT ON EVOLUTIONARY TRAJECTORIES.

Published in:

Evolution, 2005, v. 59, n. 6, p. 1165, doi. 10.1554/04-272

By:

Weinreich, Daniel M.;
Watson, Richard A.;
Lin Chao;
Harrison, R.

Publication type:

Article

Detecting epistasis with the marginal epistasis test in genetic mapping studies of quantitative traits.

Published in:

PLoS Genetics, 2017, v. 13, n. 7, p. 1, doi. 10.1371/journal.pgen.1006869

By:

Crawford, Lorin;
Zeng, Ping;
Mukherjee, Sayan;
Zhou, Xiang

Publication type:

Article

Epistasis Analysis Goes Genome-Wide.

Published in:

PLoS Genetics, 2017, v. 13, n. 2, p. 1, doi. 10.1371/journal.pgen.1006558

By:

Zhang, Jianzhi

Publication type:

Article

Studying the genetic basis of ecological interactions with intergenomic epistasis.

Published in:

Oikos, 2025, v. 2025, n. 6, p. 1, doi. 10.1111/oik.10835

By:

Hablützel, Loraine;
Bank, Claudia

Publication type:

Article

Mutation and Epistasis in Influenza Virus Evolution.

Published in:

Viruses (1999-4915), 2018, v. 10, n. 8, p. 407, doi. 10.3390/v10080407

By:

Lyons, Daniel M.;
Lauring, Adam S.

Publication type:

Article

A Novel Two-Stage Approach for Epistasis Detection in Genome-Wide Case-Control Studies.

Published in:

Biochemical Genetics, 2014, v. 52, n. 9/10, p. 403, doi. 10.1007/s10528-014-9656-7

By:

Liao, Zhongli;
Zeng, Qingguang;
Liao, Bo;
Li, Xiong

Publication type:

Article

The complete compositional epistasis detection in genome-wide association studies.

Published in:

BMC Genetics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2156-14-7

By:

Xiang Wan;
Can Yang;
Qiang Yang;
Hongyu Zhao;
Weichuan Yu

Publication type:

Article

Lack of Evidence for Sign Epistasis Between Beneficial Mutations in an RNA Bacteriophage.

Published in:

Journal of Molecular Evolution, 2010, v. 71, n. 5/6, p. 437, doi. 10.1007/s00239-010-9397-0

By:

Betancourt, Andrea

Publication type:

Article

Epistasis × environment interactions among Arabidopsis thaliana glucosinolate genes impact complex traits and fitness in the field.

Published in:

New Phytologist, 2017, v. 215, n. 3, p. 1249, doi. 10.1111/nph.14646

By:

Kerwin, Rachel E.;
Feusier, Julie;
Muok, Alise;
Lin, Catherine;
Larson, Brandon;
Copeland, Daniel;
Corwin, Jason A.;
Rubin, Matthew J.;
Francisco, Marta;
Li, Baohua;
Joseph, Bindu;
Weinig, Cynthia;
Kliebenstein, Daniel J.

Publication type:

Article

Prediction of complex traits based on the epistasis of multiple haplotypes.

Published in:

Journal of Human Genetics, 2007, v. 52, n. 5, p. 456, doi. 10.1007/s10038-007-0140-7

By:

Kung-Hao Liang;
Ying-Jye Wu

Publication type:

Article

Evaluating Methods for Modeling Epistasis Networks with Application to Head and Neck Cancer.

Published in:

Cancer Informatics, 2015, n. 14, p. 17, doi. 10.4137/CIN.S17289

By:

Talluri, Rajesh;
Shete, Sanjay

Publication type:

Article

wtest: an integrated R package for genetic epistasis testing.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 9, p. 1, doi. 10.1186/s12920-019-0638-9

By:

Sun, Rui;
Xia, Xiaoxuan;
Chong, Ka Chun;
Zee, Benny Chung-Ying;
Wu, William Ka Kei;
Wang, Maggie Haitian

Publication type:

Article

Sexual Selection, Epistasis and Species Boundaries in Sympatric Hawaiian Picture-winged Drosophila.

Published in:

Journal of Insect Behavior, 2014, v. 27, n. 1, p. 27, doi. 10.1007/s10905-013-9404-6

By:

Price, Donald;
Souder, Steven;
Russo-Tait, Tatiane

Publication type:

Article

Detection and characterization of epistasis between QTLs on plant height in rice using single segment substitution lines.

Published in:

Breeding Science, 2015, v. 65, n. 3, p. 192, doi. 10.1270/jsbbs.65.192

By:

Haitao Zhu;
Ziqiang Liu;
Xuelin Fu;
Ziju Dai;
Shaokui Wang;
Guiquan Zhang;
Ruizhen Zeng;
Guifu Liu

Publication type:

Article

PyToxo: a Python tool for calculating penetrance tables of high-order epistasis models.

Published in:

BMC Bioinformatics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12859-022-04645-7

By:

González-Seoane, Borja;
Ponte-Fernández, Christian;
González-Domínguez, Jorge;
Martín, María J.

Publication type:

Article

Synergistic epistasis and alternative hypotheses.

Published in:

Journal of Evolutionary Biology, 2004, v. 17, n. 6, p. 1400, doi. 10.1111/j.1420-9101.2004.00755.x

By:

Trouve, S.;
Ding, A.;
Goudet, J.

Publication type:

Article

Evidence for epistasis: reply to Trouveet al.

Published in:

Journal of Evolutionary Biology, 2004, v. 17, n. 6, p. 1402, doi. 10.1111/j.1420-9101.2004.00803.x

By:

Ebert, D.;
Salathé, P.;
Kawecki, T. J.

Publication type:

Article

Epistasis affecting litter size in mice.

Published in:

Journal of Evolutionary Biology, 2004, v. 17, n. 3, p. 593, doi. 10.1111/j.1420-9101.2004.00702.x

By:

Peripato, A. C.;
De Brito, R. A.;
Matioli, S. A.;
L. S. Pletscher, S. A.;
Vaughn, T. T.;
Cheveaud, J. M.

Publication type:

Article

A gene's eye view of epistasis, selection and speciation.

Published in:

Journal of Evolutionary Biology, 2002, v. 15, n. 3, p. 337, doi. 10.1046/j.1420-9101.2002.00413.x

By:

Wade, M. J

Publication type:

Article

Clinical Implications of Digenic Inheritance and Epistasis in Primary Immunodeficiency Disorders.

Published in:

Frontiers in Immunology, 2018, p. 1, doi. 10.3389/fimmu.2017.01965

By:

Ameratunga, Rohan;
Woon, See-Tarn;
Bryant, Vanessa L.;
Steele, Richard;
Slade, Charlotte;
Leung, Euphemia Yee;
Lehnert, Klaus

Publication type:

Article

Epistasis in Maize (<em>Zea mays</em> L.).

Published in:

Plant Breeding, 1987, v. 98, n. 3, p. 185, doi. 10.1111/j.1439-0523.1987.tb01115.x

By:

Melchinger, A. E.;
Geiger, H. H.;
Seitz, G.;
Schmidt, G. A.

Publication type:

Article

On the Relationship Between High-Order Linkage Disequilibrium and Epistasis.

Published in:

G3: Genes | Genomes | Genetics, 2018, v. 8, n. 8, p. 2817, doi. 10.1534/g3.118.200513

By:

Yanjun Zan;
K. G. Forsberg, Simon;
Carlborg, Örjan

Publication type:

Article

Partial Dominance, Overdominance, Epistasis and QTL by Environment Interactions Contribute to Heterosis in Two Upland Cotton Hybrids.

Published in:

G3: Genes | Genomes | Genetics, 2016, v. 6, n. 1, p. 499, doi. 10.1534/g3.115.025809

By:

Lianguang Shang;
Yumei Wang;
Shihu Cai;
Xiaocui Wang;
Yuhua Li;
Abduweli, Abdugheni;
Jinping Hua

Publication type:

Article

On the relationship between epistasis and genetic variance heterogeneity.

Published in:

Journal of Experimental Botany, 2017, v. 68, n. 20, p. 5431, doi. 10.1093/jxb/erx283

By:

Forsberg, Simon K. G.;
Carlborg, Örjan

Publication type:

Article

FDHE-IW: A Fast Approach for Detecting High-Order Epistasis in Genome-Wide Case-Control Studies.

Published in:

Genes, 2018, v. 9, n. 9, p. 435, doi. 10.3390/genes9090435

By:

Tuo, Shouheng

Publication type:

Article

Consequences of Epistasis on Growth in an Erhualian × White Duroc Pig Cross.

Published in:

PLoS ONE, 2017, v. 12, n. 1, p. 1, doi. 10.1371/journal.pone.0162045

By:

Crooks, Lucy;
Guo, Yuanmei

Publication type:

Article

The Integration of Epistasis Network and Functional Interactions in a GWAS Implicates RXR Pathway Genes in the Immune Response to Smallpox Vaccine.

Published in:

PLoS ONE, 2016, v. 11, n. 8, p. 1, doi. 10.1371/journal.pone.0158016

By:

McKinney, Brett A.;
Lareau, Caleb;
Oberg, Ann L.;
Kennedy, Richard B.;
Ovsyannikova, Inna G.;
Poland, Gregory A.

Publication type:

Article

Epistasis Test in Meta-Analysis: A Multi-Parameter Markov Chain Monte Carlo Model for Consistency of Evidence.

Published in:

PLoS ONE, 2016, v. 11, n. 4, p. 1, doi. 10.1371/journal.pone.0152891

By:

Lin, Chin;
Chu, Chi-Ming;
Su, Sui-Lung

Publication type:

Article

Significance of linkage disequilibrium and epistasis on genetic variances in noninbred and inbred populations.

Published in:

BMC Genomics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12864-022-08335-9

By:

Viana, José Marcelo Soriano;
Garcia, Antonio Augusto Franco

Publication type:

Article

A statistical procedure to map high-order epistasis for complex traits.

Published in:

Briefings in Bioinformatics, 2013, v. 14, n. 3, p. 302, doi. 10.1093/bib/bbs027

By:

Pang, Xiaoming;
Wang, Zhong;
Yap, John S.;
Wang, Jianxin;
Zhu, Junjia;
Bo, Wenhao;
Lv, Yafei;
Xu, Fang;
Zhou, Tao;
Peng, Shaofeng;
Shen, Dengfeng;
Wu, Rongling

Publication type:

Article

Epistasis and the Evolution of Antimicrobial Resistance.

Published in:

Frontiers in Microbiology, 2017, v. 8, p. 1, doi. 10.3389/fmicb.2017.00246

By:

Alex Wong

Publication type:

Article

A strategy to apply quantitative epistasis analysis on developmental traits.

Published in:

BMC Genetics, 2017, v. 18, p. 1, doi. 10.1186/s12863-017-0508-4

By:

Labocha, Marta K.;
Wang Yuan;
Aleman-Meza, Boanerges;
Weiwei Zhong

Publication type:

Article

Performance of epistasis detection methods in semi-simulated GWAS.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12859-018-2229-8

By:

Chatelain, Clément;
Durand, Guillermo;
Thuillier, Vincent;
Augé, Franck

Publication type:

Article

Eigen-Epistasis for detecting gene-gene interactions.

Published in:

BMC Bioinformatics, 2017, v. 18, p. 1, doi. 10.1186/s12859-017-1488-0

By:

Stanislas, Virginie;
Dalmasso, Cyril;
Ambroise, Christophe

Publication type:

Article

Reverse Pathway Genetic Approach Identifies Epistasis in Autism Spectrum Disorders.

Published in:

PLoS Genetics, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pgen.1006516

By:

Mitra, Ileena;
Lavillaureix, Alinoë;
Yeh, Erika;
Traglia, Michela;
Tsang, Kathryn;
Bearden, Carrie E.;
Rauen, Katherine A.;
Weiss, Lauren A.

Publication type:

Article

Functional Regression Models for Epistasis Analysis of Multiple Quantitative Traits.

Published in:

PLoS Genetics, 2016, v. 12, n. 4, p. 1, doi. 10.1371/journal.pgen.1005965

By:

Zhang, Futao;
Xie, Dan;
Liang, Meimei;
Xiong, Momiao

Publication type:

Article

Inferring Epistasis from Genetic Time-series Data.

Published in:

Molecular Biology & Evolution, 2022, v. 39, n. 10, p. 1, doi. 10.1093/molbev/msac199

By:

Sohail, Muhammad Saqib;
Louie, Raymond H Y;
Hong, Zhenchen;
Barton, John P;
McKay, Matthew R

Publication type:

Article

Robustness of Phylogenetic Inference to Model Misspecification Caused by Pairwise Epistasis.

Published in:

Molecular Biology & Evolution, 2021, v. 38, n. 10, p. 4603, doi. 10.1093/molbev/msab163

By:

Magee, Andrew F;
Hilton, Sarah K;
DeWitt, William S

Publication type:

Article

Shadows of complexity: what biological networks reveal about epistasis and pleiotropy.

Published in:

2009

By:

Tyler, Anna L.;
Asselbergs, Folkert W.;
Williams, Scott M.;
Moore, Jason H.

Publication type:

Essay