Works matching DNA structure

Results: 5000

Density and structure of DNA immobilised on gold nanoparticles affect sensitivity in nucleic acid detection.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-92474-y

By:

Fukuzumi, Nanami;
Hirao, Gen;
Ogawa, Atsushi;
Asahi, Tsuyoshi;
Maeda, Mizuo;
Zako, Tamotsu

Publication type:

Article

Computational Modeling of DNA 3D Structures: From Dynamics and Mechanics to Folding.

Published in:

Molecules, 2023, v. 28, n. 12, p. 4833, doi. 10.3390/molecules28124833

By:

Mu, Zi-Chun;
Tan, Ya-Lan;
Liu, Jie;
Zhang, Ben-Gong;
Shi, Ya-Zhou

Publication type:

Article

The Anti-DNA Antibodies: Their Specificities for Unique DNA Structures and Their Unresolved Clinical Impact—A System Criticism and a Hypothesis.

Published in:

Frontiers in Immunology, 2022, v. 12, p. 1, doi. 10.3389/fimmu.2021.808008

By:

Rekvig, Ole Petter

Publication type:

Article

Effects of alternating electric field on the imaging of DNA double-helix structure by atomic force microscope.

Published in:

Applied Nanoscience, 2020, v. 10, n. 9, p. 3517, doi. 10.1007/s13204-020-01509-5

By:

Wang, Ying;
Ma, Ke;
Wang, Jiajia;
Wang, Yihui;
Li, Li;
Liu, Ziyu;
Hu, Jing;
Gao, Mingyan;
Wang, Zuobin

Publication type:

Article

The Anticancer Drug Daunomycin Directly Affects Gene Expression and DNA Structure.

Published in:

International Journal of Molecular Sciences, 2023, v. 24, n. 7, p. 6631, doi. 10.3390/ijms24076631

By:

Nishio, Takashi;
Shimada, Yohji;
Yoshikawa, Yuko;
Kenmotsu, Takahiro;
Schiessel, Helmut;
Yoshikawa, Kenichi

Publication type:

Article

Different Effects of Cisplatin and Transplatin on the Higher-Order Structure of DNA and Gene Expression.

Published in:

International Journal of Molecular Sciences, 2020, v. 21, n. 1, p. 34, doi. 10.3390/ijms21010034

By:

Kishimoto, Toshifumi;
Yoshikawa, Yuko;
Yoshikawa, Kenichi;
Komeda, Seiji

Publication type:

Article

The Rich World of p53 DNA Binding Targets: The Role of DNA Structure.

Published in:

International Journal of Molecular Sciences, 2019, v. 20, n. 22, p. 5605, doi. 10.3390/ijms20225605

By:

Brázda, Václav;
Fojta, Miroslav

Publication type:

Article

Making the Bend: DNA Tertiary Structure and Protein-DNA Interactions.

Published in:

International Journal of Molecular Sciences, 2014, v. 15, n. 7, p. 12335, doi. 10.3390/ijms150712335

By:

Harteis, Sabrina;
Schneider, Sabine

Publication type:

Article

Strength in Numbers: Development of a Fluorescence Sensor Array for Secondary Structures of DNA.

Published in:

Chemistry - A European Journal, 2019, v. 25, n. 7, p. 1812, doi. 10.1002/chem.201805422

By:

Zuffo, Michela;
Xie, Xiao;
Granzhan, Anton

Publication type:

Article

Multi-Faceted Roles of ERCC1-XPF Nuclease in Processing Non-B DNA Structures.

Published in:

DNA (2673-8856), 2022, v. 2, n. 4, p. 231, doi. 10.3390/dna2040017

By:

Li, Tonia T.;
Vasquez, Karen M.

Publication type:

Article

Molecular topography of the MED12-deleted region in smooth muscle tumors: a possible link between non-B DNA structures and hypermutability.

Published in:

Molecular Cytogenetics (17558166), 2013, v. 6, n. 1, p. 1, doi. 10.1186/1755-8166-6-23

By:

Markowski, Dominique Nadine;
Nimzyk, Rolf;
Belge, Gazanfer;
Löning, Thomas;
Helmke, Burkhard Maria;
Bullerdiek, Jörn

Publication type:

Article

A DNA Structure Containing Ag<sup>I</sup>-Mediated G:G and C:C Base Pairs.

Published in:

Angewandte Chemie, 2017, v. 129, n. 32, p. 9558, doi. 10.1002/ange.201704891

By:

Liu, Hehua;
Shen, Fusheng;
Haruehanroengra, Phensinee;
Yao, Qingqing;
Cheng, Yunshan;
Chen, Yiqing;
Yang, Chun;
Zhang, Jing;
Wu, Baixing;
Luo, Qiang;
Cui, Ruixue;
Li, Jixi;
Ma, Jinbiao;
Sheng, Jia;
Gan, Jianhua

Publication type:

Article

Front Cover: B‐DNA Structure and Stability: The Role of Nucleotide Composition and Order (ChemistryOpen 2/2022).

Published in:

ChemistryOpen, 2022, v. 11, n. 2, p. 1, doi. 10.1002/open.202200014

By:

Nieuwland, Celine;
Hamlin, Trevor A.;
Fonseca Guerra, Célia;
Barone, Giampaolo;
Bickelhaupt, F. Matthias

Publication type:

Article

DNA secondary structure formation by DNA shuffling of the conserved domains of the Cry protein of Bacillus thuringiensis.

Published in:

BMC Biophysics, 2017, v. 10, p. 1, doi. 10.1186/s13628-017-0036-7

By:

Pinzon, Efrain H.;
Sierra, Daniel A.;
Suarez, Miguel O.;
Orduz, Sergio;
Florez, Alvaro M.

Publication type:

Article

Observations of three "re-entrant" twisted structures in double-stranded DNA dispersion particles.

Published in:

European Biophysics Journal, 2022, v. 51, n. 1, p. 85, doi. 10.1007/s00249-021-01578-6

By:

Yevdokimov, Yuri M.;
Skuridin, Sergey G.;
Salyanov, Viktor I.;
Kats, Efim I.

Publication type:

Article

Sequence motifs capable of forming DNA stem-loop structures act as a replication diode.

Published in:

FEBS Open Bio, 2017, v. 7, n. 7, p. 944, doi. 10.1002/2211-5463.12233

By:

Shirak, Andrey;
Seroussi, Uri;
Gootwine, Elisha;
Seroussi, Eyal

Publication type:

Article

The i-Motif as a Molecular Target: More Than a Complementary DNA Secondary Structure.

Published in:

Pharmaceuticals (14248247), 2021, v. 14, n. 2, p. 96, doi. 10.3390/ph14020096

By:

Brown, Susie L.;
Kendrick, Samantha;
Meegan, Mary

Publication type:

Article

Young retrotransposons and non‐B DNA structures promote the establishment of dominant rye centromere in the 1RS.1BL fused centromere.

Published in:

New Phytologist, 2024, v. 241, n. 2, p. 607, doi. 10.1111/nph.19359

By:

Liu, Chang;
Huang, Yuhong;
Guo, Xianrui;
Yi, Congyang;
Liu, Qian;
Zhang, Kaibiao;
Zhu, Congle;
Liu, Yang;
Han, Fangpu

Publication type:

Article

Dynamics of physiologically relevant noncanonical DNA structures: an overview from experimental and theoretical studies.

Published in:

Briefings in Functional Genomics, 2019, v. 18, n. 3, p. 192, doi. 10.1093/bfgp/ely026

By:

Ghoshdastidar, Debostuti;
Bansal, Manju

Publication type:

Article

Analysis of DNA structure and sequence requirements for Pseudomonas aeruginosa MutL endonuclease activity.

Published in:

Journal of Biochemistry, 2013, v. 154, n. 6, p. 505, doi. 10.1093/jb/mvt080

By:

Correa, Elisa M.E.;
De Tullio, Luisina;
Vélez, Pablo S.;
Martina, Mariana A.;
Argaraña, Carlos E.;
Barra, José L.

Publication type:

Article

Dynamic Structure and Stability of DNA Duplexes Bearing a Dinuclear Hg(II)-Mediated Base Pair.

Published in:

Molecules, 2020, v. 25, n. 21, p. 4942, doi. 10.3390/molecules25214942

By:

Bachmann, Jim;
Schönrath, Isabell;
Müller, Jens;
Doltsinis, Nikos L.;
Brehm, Martin

Publication type:

Article

Photo‐Cross‐linked DNA Structures Greatly Improves Their Serum Nuclease Resistances and Gene Knock‐In Efficiencies.

Published in:

Small Methods, 2025, v. 9, n. 5, p. 1, doi. 10.1002/smtd.202401346

By:

Li, Zhigang;
Ma, Youwei;
Li, Chengxu;
Xiao, Shiyan;
Liang, Haojun

Publication type:

Article

SLE: a cognitive step forward—a synthesis of rethinking theories, causality, and ignored DNA structures.

Published in:

Frontiers in Immunology, 2024, p. 1, doi. 10.3389/fimmu.2024.1393814

By:

Rekvig, Ole Petter

Publication type:

Article

Fabrication of Troponin I Biosensor Composed of Multi-Functional DNA Structure/Au Nanocrystal Using Electrochemical and Localized Surface Plasmon Resonance Dual-Detection Method.

Published in:

Nanomaterials (2079-4991), 2019, v. 9, n. 7, p. 1000, doi. 10.3390/nano9071000

By:

Lee, Taek;
Kim, Jinmyeong;
Nam, Inho;
Lee, Yeonju;
Kim, Ha Eun;
Sohn, Hiesang;
Kim, Seong-Eun;
Yoon, Jinho;
Seo, Sang Woo;
Lee, Min-Ho;
Park, Chulhwan

Publication type:

Article

In vivo visualization of the i-motif DNA secondary structure in the Bombyx mori testis.

Published in:

Epigenetics & Chromatin, 2020, v. 13, n. 1, p. 1, doi. 10.1186/s13072-020-00334-y

By:

Tang, Wenhuan;
Niu, Kangkang;
Yu, Guoxing;
Jin, Ying;
Zhang, Xian;
Peng, Yuling;
Chen, Shuna;
Deng, Huimin;
Li, Sheng;
Wang, Jian;
Song, Qisheng;
Feng, Qili

Publication type:

Article

Mms1 is an assistant for regulating G-quadruplex DNA structures.

Published in:

Current Genetics, 2018, v. 64, n. 3, p. 535, doi. 10.1007/s00294-017-0773-9

By:

Schwindt, Eike;
Paeschke, Katrin

Publication type:

Article

Evolutionary Invariant of the Structure of DNA Double Helix in RNAP II Core Promoters.

Published in:

International Journal of Molecular Sciences, 2022, v. 23, n. 18, p. N.PAG, doi. 10.3390/ijms231810873

By:

Melikhova, Anastasia V.;
Anashkina, Anastasia A.;
Il'icheva, Irina A.

Publication type:

Article

Effects of Structural Isomers of Spermine on the Higher-Order Structure of DNA and Gene Expression.

Published in:

International Journal of Molecular Sciences, 2021, v. 22, n. 5, p. 2355, doi. 10.3390/ijms22052355

By:

Kitagawa, Tomoki;
Nishio, Takashi;
Yoshikawa, Yuko;
Umezawa, Naoki;
Higuchi, Tsunehiko;
Shew, Chwen-Yang;
Kenmotsu, Takahiro;
Yoshikawa, Kenichi;
Takeyasu, Kunio

Publication type:

Article

Targeting G‐Rich DNA Structures with Photoreactive Bis‐Cyclometallated Iridium(III) Complexes.

Published in:

Chemistry - A European Journal, 2019, v. 25, n. 55, p. 12730, doi. 10.1002/chem.201902183

By:

Weynand, Justin;
Bonnet, Hughes;
Loiseau, Frédérique;
Ravanat, Jean‐Luc;
Dejeu, Jérôme;
Defrancq, Eric;
Elias, Benjamin

Publication type:

Article

Self-Assembly of DNA Origami and Single-Stranded Tile Structures at Room Temperature.

Published in:

Angewandte Chemie International Edition, 2013, v. 52, n. 35, p. 9219, doi. 10.1002/anie.201303611

By:

Zhang, Zhao;
Song, Jie;
Besenbacher, Flemming;
Dong, Mingdong;
Gothelf, Kurt V.

Publication type:

Article

Stabilised DNA secondary structures with increasing transcription localise hypermutable bases for somatic hypermutation in IGHV3-23.

Published in:

Immunogenetics, 2012, v. 64, n. 7, p. 481, doi. 10.1007/s00251-012-0607-3

By:

Duvvuri, Bhargavi;
Duvvuri, Venkata;
Wu, Jianhong;
Wu, Gillian

Publication type:

Article

B‐DNA Structure and Stability: The Role of Nucleotide Composition and Order.

Published in:

ChemistryOpen, 2022, v. 11, n. 2, p. 1, doi. 10.1002/open.202100231

By:

Nieuwland, Celine;
Hamlin, Trevor A.;
Fonseca Guerra, Célia;
Barone, Giampaolo;
Bickelhaupt, F. Matthias

Publication type:

Article

COMPERATIVE STUDY OF PRIMARY AND SECONDARY STRUCTURE OF DNA OF E. COLI OF HEALTHY AND CANCER-SICK PERSONS AND THEIR INFLUENCE ON THE DNA OF TUMOR CELL.

Published in:

Electronic Journal of Natural Sciences, 2012, v. 19, n. 2, p. 14

By:

Shahinyan, A. A.;
Garibyan, G. V.;
Babayan, Yu. S.;
Nersesyan, L. E.;
Karapetyan, O. G.

Publication type:

Article

A Kernelized Classification Approach for Cancer Recognition Using Markovian Analysis of DNA Structure Patterns as Feature Mining.

Published in:

Cell Biochemistry & Biophysics, 2024, v. 82, n. 3, p. 2249, doi. 10.1007/s12013-024-01336-3

By:

Kalal, Vijay;
Jha, Brajesh Kumar

Publication type:

Article

Revealing DNA Structure at Liquid/Solid Interfaces by AFM-Based High-Resolution Imaging and Molecular Spectroscopy.

Published in:

Molecules, 2021, v. 26, n. 21, p. 6476, doi. 10.3390/molecules26216476

By:

Lipiec, Ewelina;
Sofińska, Kamila;
Seweryn, Sara;
Wilkosz, Natalia;
Szymonski, Marek

Publication type:

Article

Structure of a DNA G-Quadruplex Related to Osteoporosis with a G-A Bulge Forming a Pseudo-loop.

Published in:

Molecules, 2020, v. 25, n. 20, p. 4867, doi. 10.3390/molecules25204867

By:

Lenarčič Živković, Martina;
Rozman, Jan;
Plavec, Janez;
Seley-Radtke, Katherine;
McPhee, Derek J.

Publication type:

Article

p53 Binds Preferentially to Non-B DNA Structures Formed by the Pyrimidine-Rich Strands of GAA·TTC Trinucleotide Repeats Associated with Friedreich's Ataxia.

Published in:

Molecules, 2019, v. 24, n. 11, p. 2078, doi. 10.3390/molecules24112078

By:

Helma, Robert;
Bažantová, Pavla;
Petr, Marek;
Adámik, Matej;
Renčiuk, Daniel;
Tichý, Vlastimil;
Pastuchová, Alena;
Soldánová, Zuzana;
Pečinka, Petr;
Bowater, Richard P.;
Fojta, Miroslav;
Brázdová, Marie;
Yatsunyk, Liliya;
Monchaud, David

Publication type:

Article

Multicharged Phthalocyanines as Selective Ligands for G-Quadruplex DNA Structures.

Published in:

Molecules, 2019, v. 24, n. 4, p. 733, doi. 10.3390/molecules24040733

By:

Ramos, Catarina I. V.;
Almeida, Susana P.;
Lourenço, Leandro M. O.;
Pereira, Patrícia M. R.;
Fernandes, Rosa;
Faustino, M. Amparo F.;
Tomé, João P. C.;
Carvalho, Josué;
Cruz, Carla;
Neves, M. Graça P. M. S.

Publication type:

Article

DNA superhelical structures with non-constant helical pitch.

Published in:

Mathematics & Mechanics of Solids, 2013, v. 18, n. 6, p. 649, doi. 10.1177/1081286513485771

By:

Argudo, David;
Purohit, Prashant K

Publication type:

Article

DNA secondary structures: stability and function of G-quadruplex structures.

Published in:

Nature Reviews Genetics, 2012, v. 13, n. 11, p. 770, doi. 10.1038/nrg3296

By:

Bochman, Matthew L.;
Paeschke, Katrin;
Zakian, Virginia A.

Publication type:

Article

Novel Determination of the Influence of Idarubicin upon DNA Chain Structure Using an Electrochemical DNA Biosensor by Voltammetry.

Published in:

Analytical Letters, 2024, v. 57, n. 18, p. 2994, doi. 10.1080/00032719.2024.2308051

By:

Subak, Hasret

Publication type:

Article

Metal Ion-Directed Specific DNA Structures and Their Functions.

Published in:

Life (2075-1729), 2022, v. 12, n. 5, p. 686, doi. 10.3390/life12050686

By:

Ihara, Toshihiro;
Kitamura, Yusuke;
Katsuda, Yousuke

Publication type:

Article

DNA Origami Ring Structures as Construction Element of Self-Thermophoretic Swimmers.

Published in:

Physica Status Solidi. A: Applications & Materials Science, 2019, v. 216, n. 12, p. 1, doi. 10.1002/pssa.201800775

By:

Heerwig, Andreas;
Schubel, Martin;
Schirmer, Christine;
Herms, Alexander;
Cichos, Frank;
Mertig, Michael

Publication type:

Article

Ethidium Bromide Modifies The Agarose Electrophoretic Mobility of CAG·CTG Alternative DNA Structures Generated by PCR.

Published in:

Frontiers in Cellular Neuroscience, 2017, v. 11, p. 1, doi. 10.3389/fncel.2017.00153

By:

Gomes-Pereira, Mário;
Monckton, Darren G.

Publication type:

Article

The hopfion structure in DNA knots.

Published in:

Canadian Journal of Physics, 2025, v. 103, n. 5, p. 480, doi. 10.1139/cjp-2024-0233

By:

Wang, Ying;
Su, Xuchang;
Zhang, Lei;
Shi, Xuguang

Publication type:

Article

Structure and flexibility of the DNA polymerase holoenzyme of vaccinia virus.

Published in:

PLoS Pathogens, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.ppat.1011652

By:

Burmeister, Wim P.;
Boutin, Laetitia;
Balestra, Aurelia C.;
Gröger, Henri;
Ballandras-Colas, Allison;
Hutin, Stephanie;
Kraft, Christian;
Grimm, Clemens;
Böttcher, Bettina;
Fischer, Utz;
Tarbouriech, Nicolas;
Iseni, Frédéric

Publication type:

Article

Knot soliton in DNA and geometric structure of its free-energy density.

Published in:

Journal of Biological Physics, 2018, v. 44, n. 1, p. 81, doi. 10.1007/s10867-017-9476-1

By:

Ying Wang;
Xuguang Shi

Publication type:

Article

NMR study of the effects of some bleomycin C-termini on the structure of a DNA hairpin with the 5′-GC-3′ binding site.

Published in:

Journal of Biological Inorganic Chemistry (JBIC), 2017, v. 22, n. 1, p. 121, doi. 10.1007/s00775-016-1413-4

By:

Lehmann, Teresa;
Murray, Sally;
Ingersoll, Azure;
Reilly, Teresa;
Follett, Shelby;
Macartney, Kevin;
Harpster, Mark

Publication type:

Article

3dDNA: A Computational Method of Building DNA 3D Structures.

Published in:

Molecules, 2022, v. 27, n. 18, p. 5936, doi. 10.3390/molecules27185936

By:

Zhang, Yi;
Xiong, Yiduo;
Xiao, Yi

Publication type:

Article

Structures and stability of simple DNA repeats from bacteria.

Published in:

Biochemical Journal, 2020, v. 477, n. 2, p. 325, doi. 10.1042/BCJ20190703

By:

Brazda, Vaclav;
Fojta, Miroslav;
Bowater, Richard P.

Publication type:

Article