Works matching DNA structure

Results: 5000

Front Cover: B‐DNA Structure and Stability: The Role of Nucleotide Composition and Order (ChemistryOpen 2/2022).

Published in:

ChemistryOpen, 2022, v. 11, n. 2, p. 1, doi. 10.1002/open.202200014

By:

Nieuwland, Celine;
Hamlin, Trevor A.;
Fonseca Guerra, Célia;
Barone, Giampaolo;
Bickelhaupt, F. Matthias

Publication type:

Article

Effects of alternating electric field on the imaging of DNA double-helix structure by atomic force microscope.

Published in:

Applied Nanoscience, 2020, v. 10, n. 9, p. 3517, doi. 10.1007/s13204-020-01509-5

By:

Wang, Ying;
Ma, Ke;
Wang, Jiajia;
Wang, Yihui;
Li, Li;
Liu, Ziyu;
Hu, Jing;
Gao, Mingyan;
Wang, Zuobin

Publication type:

Article

Strength in Numbers: Development of a Fluorescence Sensor Array for Secondary Structures of DNA.

Published in:

Chemistry - A European Journal, 2019, v. 25, n. 7, p. 1812, doi. 10.1002/chem.201805422

By:

Zuffo, Michela;
Xie, Xiao;
Granzhan, Anton

Publication type:

Article

Molecular topography of the MED12-deleted region in smooth muscle tumors: a possible link between non-B DNA structures and hypermutability.

Published in:

Molecular Cytogenetics (17558166), 2013, v. 6, n. 1, p. 1, doi. 10.1186/1755-8166-6-23

By:

Markowski, Dominique Nadine;
Nimzyk, Rolf;
Belge, Gazanfer;
Löning, Thomas;
Helmke, Burkhard Maria;
Bullerdiek, Jörn

Publication type:

Article

Computational Modeling of DNA 3D Structures: From Dynamics and Mechanics to Folding.

Published in:

Molecules, 2023, v. 28, n. 12, p. 4833, doi. 10.3390/molecules28124833

By:

Mu, Zi-Chun;
Tan, Ya-Lan;
Liu, Jie;
Zhang, Ben-Gong;
Shi, Ya-Zhou

Publication type:

Article

A DNA Structure Containing Ag<sup>I</sup>-Mediated G:G and C:C Base Pairs.

Published in:

Angewandte Chemie, 2017, v. 129, n. 32, p. 9558, doi. 10.1002/ange.201704891

By:

Liu, Hehua;
Shen, Fusheng;
Haruehanroengra, Phensinee;
Yao, Qingqing;
Cheng, Yunshan;
Chen, Yiqing;
Yang, Chun;
Zhang, Jing;
Wu, Baixing;
Luo, Qiang;
Cui, Ruixue;
Li, Jixi;
Ma, Jinbiao;
Sheng, Jia;
Gan, Jianhua

Publication type:

Article

Density and structure of DNA immobilised on gold nanoparticles affect sensitivity in nucleic acid detection.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-92474-y

By:

Fukuzumi, Nanami;
Hirao, Gen;
Ogawa, Atsushi;
Asahi, Tsuyoshi;
Maeda, Mizuo;
Zako, Tamotsu

Publication type:

Article

The Anticancer Drug Daunomycin Directly Affects Gene Expression and DNA Structure.

Published in:

International Journal of Molecular Sciences, 2023, v. 24, n. 7, p. 6631, doi. 10.3390/ijms24076631

By:

Nishio, Takashi;
Shimada, Yohji;
Yoshikawa, Yuko;
Kenmotsu, Takahiro;
Schiessel, Helmut;
Yoshikawa, Kenichi

Publication type:

Article

Different Effects of Cisplatin and Transplatin on the Higher-Order Structure of DNA and Gene Expression.

Published in:

International Journal of Molecular Sciences, 2020, v. 21, n. 1, p. 34, doi. 10.3390/ijms21010034

By:

Kishimoto, Toshifumi;
Yoshikawa, Yuko;
Yoshikawa, Kenichi;
Komeda, Seiji

Publication type:

Article

The Rich World of p53 DNA Binding Targets: The Role of DNA Structure.

Published in:

International Journal of Molecular Sciences, 2019, v. 20, n. 22, p. 5605, doi. 10.3390/ijms20225605

By:

Brázda, Václav;
Fojta, Miroslav

Publication type:

Article

Making the Bend: DNA Tertiary Structure and Protein-DNA Interactions.

Published in:

International Journal of Molecular Sciences, 2014, v. 15, n. 7, p. 12335, doi. 10.3390/ijms150712335

By:

Harteis, Sabrina;
Schneider, Sabine

Publication type:

Article

DNA secondary structure formation by DNA shuffling of the conserved domains of the Cry protein of Bacillus thuringiensis.

Published in:

BMC Biophysics, 2017, v. 10, p. 1, doi. 10.1186/s13628-017-0036-7

By:

Pinzon, Efrain H.;
Sierra, Daniel A.;
Suarez, Miguel O.;
Orduz, Sergio;
Florez, Alvaro M.

Publication type:

Article

Multi-Faceted Roles of ERCC1-XPF Nuclease in Processing Non-B DNA Structures.

Published in:

DNA (2673-8856), 2022, v. 2, n. 4, p. 231, doi. 10.3390/dna2040017

By:

Li, Tonia T.;
Vasquez, Karen M.

Publication type:

Article

The Anti-DNA Antibodies: Their Specificities for Unique DNA Structures and Their Unresolved Clinical Impact—A System Criticism and a Hypothesis.

Published in:

Frontiers in Immunology, 2022, v. 12, p. 1, doi. 10.3389/fimmu.2021.808008

By:

Rekvig, Ole Petter

Publication type:

Article

Observations of three "re-entrant" twisted structures in double-stranded DNA dispersion particles.

Published in:

European Biophysics Journal, 2022, v. 51, n. 1, p. 85, doi. 10.1007/s00249-021-01578-6

By:

Yevdokimov, Yuri M.;
Skuridin, Sergey G.;
Salyanov, Viktor I.;
Kats, Efim I.

Publication type:

Article

Young retrotransposons and non‐B DNA structures promote the establishment of dominant rye centromere in the 1RS.1BL fused centromere.

Published in:

New Phytologist, 2024, v. 241, n. 2, p. 607, doi. 10.1111/nph.19359

By:

Liu, Chang;
Huang, Yuhong;
Guo, Xianrui;
Yi, Congyang;
Liu, Qian;
Zhang, Kaibiao;
Zhu, Congle;
Liu, Yang;
Han, Fangpu

Publication type:

Article

Sequence motifs capable of forming DNA stem-loop structures act as a replication diode.

Published in:

FEBS Open Bio, 2017, v. 7, n. 7, p. 944, doi. 10.1002/2211-5463.12233

By:

Shirak, Andrey;
Seroussi, Uri;
Gootwine, Elisha;
Seroussi, Eyal

Publication type:

Article

Analysis of DNA structure and sequence requirements for Pseudomonas aeruginosa MutL endonuclease activity.

Published in:

Journal of Biochemistry, 2013, v. 154, n. 6, p. 505, doi. 10.1093/jb/mvt080

By:

Correa, Elisa M.E.;
De Tullio, Luisina;
Vélez, Pablo S.;
Martina, Mariana A.;
Argaraña, Carlos E.;
Barra, José L.

Publication type:

Article

Dynamics of physiologically relevant noncanonical DNA structures: an overview from experimental and theoretical studies.

Published in:

Briefings in Functional Genomics, 2019, v. 18, n. 3, p. 192, doi. 10.1093/bfgp/ely026

By:

Ghoshdastidar, Debostuti;
Bansal, Manju

Publication type:

Article

The i-Motif as a Molecular Target: More Than a Complementary DNA Secondary Structure.

Published in:

Pharmaceuticals (14248247), 2021, v. 14, n. 2, p. 96, doi. 10.3390/ph14020096

By:

Brown, Susie L.;
Kendrick, Samantha;
Meegan, Mary

Publication type:

Article

B‐DNA Structure and Stability: The Role of Nucleotide Composition and Order.

Published in:

ChemistryOpen, 2022, v. 11, n. 2, p. 1, doi. 10.1002/open.202100231

By:

Nieuwland, Celine;
Hamlin, Trevor A.;
Fonseca Guerra, Célia;
Barone, Giampaolo;
Bickelhaupt, F. Matthias

Publication type:

Article

Targeting G‐Rich DNA Structures with Photoreactive Bis‐Cyclometallated Iridium(III) Complexes.

Published in:

Chemistry - A European Journal, 2019, v. 25, n. 55, p. 12730, doi. 10.1002/chem.201902183

By:

Weynand, Justin;
Bonnet, Hughes;
Loiseau, Frédérique;
Ravanat, Jean‐Luc;
Dejeu, Jérôme;
Defrancq, Eric;
Elias, Benjamin

Publication type:

Article

SLE: a cognitive step forward—a synthesis of rethinking theories, causality, and ignored DNA structures.

Published in:

Frontiers in Immunology, 2024, p. 1, doi. 10.3389/fimmu.2024.1393814

By:

Rekvig, Ole Petter

Publication type:

Article

In vivo visualization of the i-motif DNA secondary structure in the Bombyx mori testis.

Published in:

Epigenetics & Chromatin, 2020, v. 13, n. 1, p. 1, doi. 10.1186/s13072-020-00334-y

By:

Tang, Wenhuan;
Niu, Kangkang;
Yu, Guoxing;
Jin, Ying;
Zhang, Xian;
Peng, Yuling;
Chen, Shuna;
Deng, Huimin;
Li, Sheng;
Wang, Jian;
Song, Qisheng;
Feng, Qili

Publication type:

Article

Fabrication of Troponin I Biosensor Composed of Multi-Functional DNA Structure/Au Nanocrystal Using Electrochemical and Localized Surface Plasmon Resonance Dual-Detection Method.

Published in:

Nanomaterials (2079-4991), 2019, v. 9, n. 7, p. 1000, doi. 10.3390/nano9071000

By:

Lee, Taek;
Kim, Jinmyeong;
Nam, Inho;
Lee, Yeonju;
Kim, Ha Eun;
Sohn, Hiesang;
Kim, Seong-Eun;
Yoon, Jinho;
Seo, Sang Woo;
Lee, Min-Ho;
Park, Chulhwan

Publication type:

Article

Stabilised DNA secondary structures with increasing transcription localise hypermutable bases for somatic hypermutation in IGHV3-23.

Published in:

Immunogenetics, 2012, v. 64, n. 7, p. 481, doi. 10.1007/s00251-012-0607-3

By:

Duvvuri, Bhargavi;
Duvvuri, Venkata;
Wu, Jianhong;
Wu, Gillian

Publication type:

Article

Dynamic Structure and Stability of DNA Duplexes Bearing a Dinuclear Hg(II)-Mediated Base Pair.

Published in:

Molecules, 2020, v. 25, n. 21, p. 4942, doi. 10.3390/molecules25214942

By:

Bachmann, Jim;
Schönrath, Isabell;
Müller, Jens;
Doltsinis, Nikos L.;
Brehm, Martin

Publication type:

Article

Evolutionary Invariant of the Structure of DNA Double Helix in RNAP II Core Promoters.

Published in:

International Journal of Molecular Sciences, 2022, v. 23, n. 18, p. N.PAG, doi. 10.3390/ijms231810873

By:

Melikhova, Anastasia V.;
Anashkina, Anastasia A.;
Il'icheva, Irina A.

Publication type:

Article

Effects of Structural Isomers of Spermine on the Higher-Order Structure of DNA and Gene Expression.

Published in:

International Journal of Molecular Sciences, 2021, v. 22, n. 5, p. 2355, doi. 10.3390/ijms22052355

By:

Kitagawa, Tomoki;
Nishio, Takashi;
Yoshikawa, Yuko;
Umezawa, Naoki;
Higuchi, Tsunehiko;
Shew, Chwen-Yang;
Kenmotsu, Takahiro;
Yoshikawa, Kenichi;
Takeyasu, Kunio

Publication type:

Article

Mms1 is an assistant for regulating G-quadruplex DNA structures.

Published in:

Current Genetics, 2018, v. 64, n. 3, p. 535, doi. 10.1007/s00294-017-0773-9

By:

Schwindt, Eike;
Paeschke, Katrin

Publication type:

Article

Photo‐Cross‐linked DNA Structures Greatly Improves Their Serum Nuclease Resistances and Gene Knock‐In Efficiencies.

Published in:

Small Methods, 2025, v. 9, n. 5, p. 1, doi. 10.1002/smtd.202401346

By:

Li, Zhigang;
Ma, Youwei;
Li, Chengxu;
Xiao, Shiyan;
Liang, Haojun

Publication type:

Article

Self-Assembly of DNA Origami and Single-Stranded Tile Structures at Room Temperature.

Published in:

Angewandte Chemie International Edition, 2013, v. 52, n. 35, p. 9219, doi. 10.1002/anie.201303611

By:

Zhang, Zhao;
Song, Jie;
Besenbacher, Flemming;
Dong, Mingdong;
Gothelf, Kurt V.

Publication type:

Article

Crystal structure of ATP‐dependent DNA ligase from Rhizobium phage vB_RleM_P10VF.

Published in:

Acta Crystallographica: Section F, Structural Biology Communications, 2025, v. 81, n. 6, p. 249, doi. 10.1107/S2053230X2500411X

By:

Rothweiler, Ulli;
Leiros, Hanna-Kirsti S.;
Williamson, Adele

Publication type:

Article

Structures of human DNA polymerases ν and θ expose their end game.

Published in:

Nature Structural & Molecular Biology, 2015, v. 22, n. 4, p. 273, doi. 10.1038/nsmb.3006

By:

Beard, William A;
Wilson, Samuel H

Publication type:

Article

Complexes of HIV-1 RT, NNRTI and RNA/DNA hybrid reveal a structure compatible with RNA degradation.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 2, p. 230, doi. 10.1038/nsmb.2485

By:

Lapkouski, Mikalai;
Tian, Lan;
Miller, Jennifer T;
Le Grice, Stuart F J;
Yang, Wei

Publication type:

Article

Association between the MTHFR-C677T isoform and structure of sperm DNA.

Published in:

Journal of Assisted Reproduction & Genetics, 2017, v. 34, n. 10, p. 1283, doi. 10.1007/s10815-017-1015-2

By:

Cornet, Dominique;
Cohen, Marc;
Clement, Arthur;
Amar, Edouard;
Fournols, Laetitia;
Clement, Patrice;
Neveux, Paul;
Ménézo, Yves

Publication type:

Article

DNA origami words, graphical structures and their rewriting systems.

Published in:

Natural Computing, 2021, v. 20, n. 2, p. 217, doi. 10.1007/s11047-020-09825-z

By:

Garrett, James;
Jonoska, Nataša;
Kim, Hwee;
Saito, Masahico

Publication type:

Article

Knot soliton in DNA and geometric structure of its free-energy density.

Published in:

Journal of Biological Physics, 2018, v. 44, n. 1, p. 81, doi. 10.1007/s10867-017-9476-1

By:

Ying Wang;
Xuguang Shi

Publication type:

Article

The Effect of Neonicotinoid Insecticide Thiacloprid on the Structure and Stability of DNA.

Published in:

Physiological Research, 2019, v. 68, p. 459, doi. 10.33549/physiolres.934385

By:

VEREBOVÁ, V.;
ŽELONKOVÁ, K.;
HOLEČKOVÁ, B.;
STANIČOVÁ, J.

Publication type:

Article

The Effect of Neonicotinoid Insecticide Thiacloprid on the Structure and Stability of DNA.

Published in:

Physiological Research, 2019, v. 68, p. S459, doi. 10.33549/physiolres.934385

By:

VEREBOVÁ, V.;
ŽELONKOVÁ, K.;
HOLEČKOVÁ, B.;
STANIČOVÁ, J.

Publication type:

Article

Indirect DNA Readout by an H-NS Related Protein: Structure of the DNA Complex of the C-Terminal Domain of Ler.

Published in:

PLoS Pathogens, 2011, v. 7, n. 11, p. 1, doi. 10.1371/journal.ppat.1002380

By:

Cordeiro, Tiago N.;
Schmidt, Holger;
Madrid, Cristina;
Juárez, Antonio;
Bernadó, Pau;
Griesinger, Christian;
Garciá, Jesús;
Pons, Miquel

Publication type:

Article

DNA superhelical structures with non-constant helical pitch.

Published in:

Mathematics & Mechanics of Solids, 2013, v. 18, n. 6, p. 649, doi. 10.1177/1081286513485771

By:

Argudo, David;
Purohit, Prashant K

Publication type:

Article

Single-cell mapping of DNA G-quadruplex structures in human cancer cells.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-02943-3

By:

Hui, Winnie W. I.;
Simeone, Angela;
Zyner, Katherine G.;
Tannahill, David;
Balasubramanian, Shankar

Publication type:

Article

Cryo-EM structure of translesion DNA synthesis polymerase ζ with a base pair mismatch.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-28644-7

By:

Malik, Radhika;
Johnson, Robert E.;
Prakash, Louise;
Prakash, Satya;
Ubarretxena-Belandia, Iban;
Aggarwal, Aneel K.

Publication type:

Article

The structure of the bacterial DNA segregation ATPase filament reveals the conformational plasticity of ParA upon DNA binding.

Published in:

Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-25429-2

By:

Parker, Alexandra V.;
Mann, Daniel;
Tzokov, Svetomir B.;
Hwang, Ling C.;
Bergeron, Julien R. C.

Publication type:

Article

A last-in first-out stack data structure implemented in DNA.

Published in:

Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-25023-6

By:

Lopiccolo, Annunziata;
Shirt-Ediss, Ben;
Torelli, Emanuela;
Olulana, Abimbola Feyisara Adedeji;
Castronovo, Matteo;
Fellermann, Harold;
Krasnogor, Natalio

Publication type:

Article

The Werner Syndrome Protein Is Distinguished from the Bloom Syndrome Protein by Its Capacity to Tightly Bind Diverse DNA Structures.

Published in:

PLoS ONE, 2012, v. 7, n. 1, p. 1, doi. 10.1371/journal.pone.0030189

By:

Kamath-Loeb, Ashwini;
Loeb, Lawrence A.;
Fry, Michael

Publication type:

Article

NMR study of the effects of some bleomycin C-termini on the structure of a DNA hairpin with the 5′-GC-3′ binding site.

Published in:

Journal of Biological Inorganic Chemistry (JBIC), 2017, v. 22, n. 1, p. 121, doi. 10.1007/s00775-016-1413-4

By:

Lehmann, Teresa;
Murray, Sally;
Ingersoll, Azure;
Reilly, Teresa;
Follett, Shelby;
Macartney, Kevin;
Harpster, Mark

Publication type:

Article

Non-canonical DNA structures in the human ribosomal DNA.

Published in:

Histochemistry & Cell Biology, 2023, v. 160, n. 6, p. 499, doi. 10.1007/s00418-023-02233-1

By:

Smirnov, Evgeny;
Molínová, Pavla;
Chmúrčiaková, Nikola;
Vacík, Tomáš;
Cmarko, Dušan

Publication type:

Article

Novel Determination of the Influence of Idarubicin upon DNA Chain Structure Using an Electrochemical DNA Biosensor by Voltammetry.

Published in:

Analytical Letters, 2024, v. 57, n. 18, p. 2994, doi. 10.1080/00032719.2024.2308051

By:

Subak, Hasret

Publication type:

Article