Works matching DE "VIRAL proteins"

Results: 5000

Structural and functional roles of conserved residues of human papillomavirus (HPV) E2 protein and biological consequences.

Published in:

Virology Journal, 2025, v. 22, n. 1, p. 1, doi. 10.1186/s12985-025-02903-7

By:

Fletcher, Sean;
Biswas-Fiss, Esther E.;
Biswas, Subhasis B.

Publication type:

Article

Catch me if you can: viral nucleic acids to host sensors.

Published in:

Frontiers in Immunology, 2025, p. 1, doi. 10.3389/fimmu.2025.1632283

By:

Jung, Yohan;
Grainger, Harmony;
Yang, Shizhuo;
Mondal, Sohaumn;
Lukong, Kiven Erique;
Conn, Kristen;
Wu, Yuliang

Publication type:

Article

Viral proteins suppress rice defenses by boosting OsTSN1 RNA decay via phase separation and multimerization.

Published in:

Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-62395-5

By:

Zeng, Ming;
Fu, Shuai;
Xu, Youping;
Li, Liyan;
Wang, Dan;
Gao, Shi-bo;
Zheng, Lianshun;
Zhang, Yunge;
Zhang, Cui;
Fei, Shifang;
Ye, Xuan;
Chen, Lele;
Wang, Yaqin;
Zhang, Tong;
Zhou, Xueping;
Wu, Jianxiang

Publication type:

Article

Catch me if you can: viral nucleic acids to host sensors.

Published in:

Frontiers in Immunology, 2025, p. 1, doi. 10.3389/fimmu.2025.1632283

By:

Jung, Yohan;
Grainger, Harmony;
Yang, Shizhuo;
Mondal, Sohaumn;
Lukong, Kiven Erique;
Conn, Kristen;
Wu, Yuliang

Publication type:

Article

Integrating bioinformatics to explore HPV-31 and HPV-52 E6/E7 proteins: from structural analysis to antigenic epitope prediction.

Published in:

Frontiers in Immunology, 2025, p. 1, doi. 10.3389/fimmu.2025.1561572

By:

Cai, Qixue;
Feng, Yifan;
Dong, Wenbo;
Meng, Yanling

Publication type:

Article

Integrating bioinformatics to explore HPV-31 and HPV-52 E6/E7 proteins: from structural analysis to antigenic epitope prediction.

Published in:

Frontiers in Immunology, 2025, p. 1, doi. 10.3389/fimmu.2025.1561572

By:

Cai, Qixue;
Feng, Yifan;
Dong, Wenbo;
Meng, Yanling

Publication type:

Article

Human cytomegalovirus induces neuronal gene expression through IE1 for viral maturation.

Published in:

Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-61915-7

By:

Kelnhofer-Millevolte, Laurel E.;
Smith, Julian R.;
Nguyen, Daniel H.;
Wilson, Lea S.;
Lewis, Hannah C.;
Arnold, Edward A.;
Brinkley, Mia R.;
Shin, Kihye;
Ahn, Jin-Hyun;
Kim, Eui Tae;
Kulej, Katarzyna;
Geballe, Adam P.;
Ramachandran, Srinivas;
Avgousti, Daphne C.

Publication type:

Article

Variation in HIV-1 Tat and Vpr protein amino acid sequences and its association with vascular health measures in a South African cohort: an exploratory study.

Published in:

Virology Journal, 2025, v. 22, n. 1, p. 1, doi. 10.1186/s12985-025-02891-8

By:

Jansen van Vuren, Esmé;
Breet, Yolandi;
Jacobs, Adriaan;
Kruger, Iolanthé M.;
Williams, Monray Edward

Publication type:

Article

Real-time Investigation of SV40 Large T-antigen Helicase Activity Using Surface Plasmon Resonance.

Published in:

Cell Biochemistry & Biophysics, 2009, v. 53, n. 1, p. 43, doi. 10.1007/s12013-008-9038-z

By:

Jason Plyler;
Karl Jasheway;
Jessica Karr;
Jarryd Brennan;
Sean Kerwin;
Wendi David

Publication type:

Article

A plasmid DNA-launched SARS-CoV-2 reverse genetics system and coronavirus toolkit for COVID-19 research.

Published in:

PLoS Biology, 2021, v. 19, n. 2, p. 1, doi. 10.1371/journal.pbio.3001091

By:

Rihn, Suzannah J.;
Merits, Andres;
Bakshi, Siddharth;
Turnbull, Matthew L.;
Wickenhagen, Arthur;
Alexander, Akira J. T.;
Baillie, Carla;
Brennan, Benjamin;
Brown, Fiona;
Brunker, Kirstyn;
Bryden, Steven R.;
Burness, Kerry A.;
Carmichael, Stephen;
Cole, Sarah J.;
Cowton, Vanessa M.;
Davies, Paul;
Davis, Chris;
De Lorenzo, Giuditta;
Donald, Claire L.;
Dorward, Mark

Publication type:

Article

Full-length three-dimensional structure of the influenza A virus M1 protein and its organization into a matrix layer.

Published in:

PLoS Biology, 2020, v. 18, n. 9, p. 1, doi. 10.1371/journal.pbio.3000827

By:

Selzer, Lisa;
Su, Zhaoming;
Pintilie, Grigore D.;
Chiu, Wah;
Kirkegaard, Karla

Publication type:

Article

Development of a fluorescent microplate assay for determining cyanovirin-N levels in plasma.

Published in:

Analytical & Bioanalytical Chemistry, 2004, v. 380, n. 2, p. 269, doi. 10.1007/s00216-004-2786-8

By:

Bringans, Scott D.;
O'Keefe, Barry R.;
Bray, Michael;
Whitehouse, Chris A.;
Boyd, Michael R.

Publication type:

Article

Nucleotide and codon usage biases involved in the evolution of African swine fever virus: A comparative genomics analysis.

Published in:

Journal of Basic Microbiology, 2023, v. 63, n. 5, p. 499, doi. 10.1002/jobm.202200624

By:

Pu, Feiyang;
Wang, Rui;
Yang, Xuanye;
Hu, Xinyan;
Wang, Jinqian;
Zhang, Lijuan;
Zhao, Yongqing;
Zhang, Derong;
Liu, Zewen;
Liu, Junlin

Publication type:

Article

Molecular characterization of recombinant premembrane protein of dengue virus serotype‐2 for development of diagnostic assay.

Published in:

Journal of Basic Microbiology, 2023, v. 63, n. 5, p. 489, doi. 10.1002/jobm.202200469

By:

Munir, Rakhtasha;
Rafique, Shazia;
Ali, Amjad;
Amin, Iram;
Ahmed, Sameen;
Vajeeha, Ayesha;
Shahid, Muhammad;
Samiullah, Tahir R.;
Idrees, Muhammad;
Tao, Yizhi J.;
Khan, Muhammad U.

Publication type:

Article

SARS‐CoV‐2, the pandemic coronavirus: Molecular and structural insights.

Published in:

Journal of Basic Microbiology, 2021, v. 61, n. 3, p. 180, doi. 10.1002/jobm.202000537

By:

Kadam, Swapnil B.;
Sukhramani, Geetika S.;
Bishnoi, Pratibha;
Pable, Anupama A.;
Barvkar, Vitthal T.

Publication type:

Article

Oral delivery of maize-produced porcine epidemic diarrhea virus spike protein elicits neutralizing antibodies in pigs.

Published in:

Plant Cell, Tissue & Organ Culture, 2020, v. 142, n. 1, p. 79, doi. 10.1007/s11240-020-01835-0

By:

Egelkrout, Erin;
Hayden, Celine;
Fake, Gina;
Keener, Todd;
Arruda, Paulo;
Saltzman, Ryan;
Walker, John;
Howard, John

Publication type:

Article

Immunogenicity of a lettuce-derived vaccine candidate expressing the E2 protein against classical swine fever virus.

Published in:

Plant Cell, Tissue & Organ Culture, 2013, v. 113, n. 3, p. 483, doi. 10.1007/s11240-013-0290-6

By:

Yiu, Jinn-Chin;
Liu, Cheng-Wei;
Su, Ruei-Yuan;
Lai, Wan-Jun;
Tseng, Menq-Jiau;
Ou, Sheng-Jung

Publication type:

Article

NMR assignment of the vaccinia virus envelope protein A27L.

Published in:

Journal of Biomolecular NMR, 2005, v. 32, n. 2, p. 178, doi. 10.1007/s10858-005-7061-6

By:

Feng-I Chu;
Yu Ho;
Tzou, Der-Lii M.

Publication type:

Article

Letter to the Editor: Assignments of 1H, 15N and 13C resonances of the proline-rich matrix protein of Moloney Murine Leukemia Virus (MA MoMuLV).

Published in:

Journal of Biomolecular NMR, 2003, v. 25, n. 3, p. 261, doi. 10.1023/A:1022844300474

By:

Noskova, Veronika N.;
Rogov, Vladimir V.;
Löhr, Frank;
Rozenberg, Yanina;
Anderson, W. French;
Potekhin, Sergey A.;
Rüterjans, Heinz

Publication type:

Article

Antibody development for preventing the human respiratory syncytial virus pathology.

Published in:

Molecular Medicine, 2020, v. 26, n. 1, p. 1, doi. 10.1186/s10020-020-00162-6

By:

Soto, Jorge A.;
Gálvez, Nicolás M. S.;
Pacheco, Gaspar A.;
Bueno, Susan M.;
Kalergis, Alexis M.

Publication type:

Article

HTLV-I env protein acts as a major antigen in patients with HTLV-I-associated arthropathy.

Published in:

Clinical Rheumatology, 2004, v. 23, n. 5, p. 400, doi. 10.1007/s10067-004-0901-z

By:

Kato, Tomohiro;
Asahara, Hiroshi;
Kurokawa, Manae Suzuki;
Fujisawa, Koushi;
Hasunuma, Tomoko;
Inoue, Hajime;
Tsuda, Masanao;
Takahashi, Shigeru;
Motokawa, Satoru;
Sumida, Takayuki;
Nishioka, Kusuki

Publication type:

Article

Chemokine Expression Profiles of Human Hepatoma Cell Lines Mediated by Hepatitis B Virus X Protein.

Published in:

Pathology & Oncology Research, 2016, v. 22, n. 2, p. 393, doi. 10.1007/s12253-015-0014-9

By:

Wang, Di-Yi;
Zou, Li-Ping;
Liu, Xiao-Jia;
Zhu, Hong-Guang;
Zhu, Rong

Publication type:

Article

Site Density Functional Theory and Structural Bioinformatics Analysis of the SARS-CoV Spike Protein and hACE2 Complex.

Published in:

Molecules, 2022, v. 27, n. 3, p. 799, doi. 10.3390/molecules27030799

By:

Kumawat, Nitesh;
Tucs, Andrejs;
Bera, Soumen;
Chuev, Gennady N.;
Valiev, Marat;
Fedotova, Marina V.;
Kruchinin, Sergey E.;
Tsuda, Koji;
Sljoka, Adnan;
Chakraborty, Amit

Publication type:

Article

Approaches to the Potential Therapy of COVID-19: A General Overview from the Medicinal Chemistry Perspective.

Published in:

Molecules, 2022, v. 27, n. 3, p. 658, doi. 10.3390/molecules27030658

By:

Menéndez, J. Carlos

Publication type:

Article

Alkyne-Tagged Apigenin, a Chemical Tool to Navigate Potential Targets of Flavonoid Anti-Dengue Leads.

Published in:

Molecules, 2021, v. 26, n. 22, p. 6967, doi. 10.3390/molecules26226967

By:

Hengphasatporn, Kowit;
Kaewmalai, Benyapa;
Jansongsaeng, Somruedee;
Badavath, Vishnu Nayak;
Saelee, Thanaphon;
Chokmahasarn, Thamonwan;
Khotavivattana, Tanatorn;
Shigeta, Yasuteru;
Rungrotmongkol, Thanyada;
Boonyasuppayakorn, Siwaporn

Publication type:

Article

Ultrasensitive Detection of COVID-19 Causative Virus (SARS-CoV-2) Spike Protein Using Laser Induced Graphene Field-Effect Transistor.

Published in:

Molecules, 2021, v. 26, n. 22, p. 6947, doi. 10.3390/molecules26226947

By:

Cui, Tian-Rui;
Qiao, Yan-Cong;
Gao, Jian-Wei;
Wang, Chun-Hua;
Zhang, Yu;
Han, Lin;
Yang, Yi;
Ren, Tian-Ling

Publication type:

Article

Diterpenes/Diterpenoids and Their Derivatives as Potential Bioactive Leads against Dengue Virus: A Computational and Network Pharmacology Study.

Published in:

Molecules, 2021, v. 26, n. 22, p. 6821, doi. 10.3390/molecules26226821

By:

Khan, Rasel Ahmed;
Hossain, Rajib;
Siyadatpanah, Abolghasem;
Al-Khafaji, Khattab;
Khalipha, Abul Bashar Ripon;
Dey, Dipta;
Asha, Umma Hafsa;
Biswas, Partha;
Saikat, Abu Saim Mohammad;
Chenari, Hadi Ahmadi;
Wilairatana, Polrat;
Islam, Muhammad Torequl

Publication type:

Article

Anti-Herpes Simplex 1 Activity of Simmondsia chinensis (Jojoba) Wax.

Published in:

Molecules, 2021, v. 26, n. 19, p. 6059, doi. 10.3390/molecules26196059

By:

Tietel, Zipora;
Melamed, Sarit;
Eretz-Kdosha, Noy;
Guetta, Ami;
Gvirtz, Raanan;
Ogen-Shtern, Navit;
Dag, Arnon;
Cohen, Guy

Publication type:

Article

Structural Insight into the Binding of Cyanovirin-N with the Spike Glycoprotein, M pro and PL pro of SARS-CoV-2: Protein–Protein Interactions, Dynamics Simulations and Free Energy Calculations.

Published in:

Molecules, 2021, v. 26, n. 17, p. 5114, doi. 10.3390/molecules26175114

By:

Naidoo, Devashan;
Kar, Pallab;
Roy, Ayan;
Mutanda, Taurai;
Bwapwa, Joseph;
Sen, Arnab;
Anandraj, Akash

Publication type:

Article

Severe Acute Respiratory Syndrome Coronavirus-2 Inactivation Activity of the Polyphenol-Rich Tea Leaf Extract with Concentrated Theaflavins and Other Virucidal Catechins.

Published in:

Molecules, 2021, v. 26, n. 16, p. 4803, doi. 10.3390/molecules26164803

By:

Takeda, Yohei;
Tamura, Kyohei;
Jamsransuren, Dulamjav;
Matsuda, Sachiko;
Ogawa, Haruko

Publication type:

Article

The Need for Community Standards to Enable Accurate Comparison of Glycoproteomics Algorithm Performance.

Published in:

Molecules, 2021, v. 26, n. 16, p. 4757, doi. 10.3390/molecules26164757

By:

Hackett, William E.;
Zaia, Joseph

Publication type:

Article

Doxycycline Interferes with Zika Virus Serine Protease and Inhibits Virus Replication in Human Skin Fibroblasts.

Published in:

Molecules, 2021, v. 26, n. 14, p. 4321, doi. 10.3390/molecules26144321

By:

Chong Teoh, Teow;
J. Al-Harbi, Sawsam;
Abdulrahman, Ammar Yasir;
Rothan, Hussin A.

Publication type:

Article

In Vitro and In Silico Anti-Arboviral Activities of Dihalogenated Phenolic Derivates of L-Tyrosine.

Published in:

Molecules, 2021, v. 26, n. 11, p. 3430, doi. 10.3390/molecules26113430

By:

Loaiza-Cano, Vanessa;
Monsalve-Escudero, Laura Milena;
Restrepo, Manuel Pastrana;
Quintero-Gil, Diana Carolina;
Pulido Muñoz, Sergio Andres;
Galeano, Elkin;
Zapata, Wildeman;
Martinez-Gutierrez, Marlen

Publication type:

Article

Aptamer Laden Liquid Crystals Biosensing Platform for the Detection of HIV-1 Glycoprotein-120.

Published in:

Molecules, 2021, v. 26, n. 10, p. 2893, doi. 10.3390/molecules26102893

By:

Abbasi, Amna Didar;
Hussain, Zakir;
Yang, Kun-Lin;
Circu, Viorel;
Manaila-Maximean, Doina;
Loiko, Valery A.

Publication type:

Article

Molecular Dynamic Simulation Search for Possible Amphiphilic Drug Discovery for Covid-19.

Published in:

Molecules, 2021, v. 26, n. 8, p. 2214, doi. 10.3390/molecules26082214

By:

Daood, Umer;
Gopinath, Divya;
Pichika, Malikarjuna Rao;
Mak, Kit-Kay;
Seow, Liang Lin

Publication type:

Article

Native Structure-Based Peptides as Potential Protein–Protein Interaction Inhibitors of SARS-CoV-2 Spike Protein and Human ACE2 Receptor.

Published in:

Molecules, 2021, v. 26, n. 8, p. 2157, doi. 10.3390/molecules26082157

By:

Odolczyk, Norbert;
Marzec, Ewa;
Winiewska-Szajewska, Maria;
Poznański, Jarosław;
Zielenkiewicz, Piotr

Publication type:

Article

8- O -(E - p -methoxycinnamoyl)harpagide Inhibits Influenza A Virus Infection by Suppressing Intracellular Calcium.

Published in:

Molecules, 2021, v. 26, n. 4, p. 1029, doi. 10.3390/molecules26041029

By:

Kwon, Eun-Bin;
Yang, Hye-Jin;
Kim, Young-Soo;
Li, Wei;
Choi, Jang-Gi;
Yang, Deok-Chun

Publication type:

Article

Carnosine to Combat Novel Coronavirus (nCoV): Molecular Docking and Modeling to Cocrystallized Host Angiotensin-Converting Enzyme 2 (ACE2) and Viral Spike Protein.

Published in:

Molecules, 2020, v. 25, n. 23, p. 5605, doi. 10.3390/molecules25235605

By:

Saadah, Loai M.;
Deiab, Ghina'a I. Abu;
Al-Balas, Qosay;
Basheti, Iman A.;
McPhee, Derek J.

Publication type:

Article

In Silico Discovery of Antimicrobial Peptides as an Alternative to Control SARS-CoV-2.

Published in:

Molecules, 2020, v. 25, n. 23, p. 5535, doi. 10.3390/molecules25235535

By:

Liscano, Yamil;
Oñate-Garzón, Jose;
Ocampo-Ibáñez, Iván Darío;
Bojarska, Joanna;
Wolf, Wojciech M.;
Remko, Milan;
Zielenkiewicz, Piotr;
Saviano, Michele;
Zabrocki, Janusz;
Kaczmarek, Krzysztof;
Sabatier, Jean-Marc

Publication type:

Article

Protease Inhibitory Effect of Natural Polyphenolic Compounds on SARS-CoV-2: An In Silico Study.

Published in:

Molecules, 2020, v. 25, n. 20, p. 4604, doi. 10.3390/molecules25204604

By:

Singh, Rajveer;
Gautam, Anupam;
Chandel, Shivani;
Ghosh, Arijit;
Dey, Dhritiman;
Roy, Syamal;
Ravichandiran, Velayutham;
Ghosh, Dipanjan;
Duval, Raphaël E.;
Richardson, Rudy J.

Publication type:

Article

Potential Therapeutic Targeting of Coronavirus Spike Glycoprotein Priming.

Published in:

Molecules, 2020, v. 25, n. 10, p. 2424, doi. 10.3390/molecules25102424

By:

Barile, Elisa;
Baggio, Carlo;
Gambini, Luca;
Shiryaev, Sergey A.;
Strongin, Alex Y.;
Pellecchia, Maurizio

Publication type:

Article

Target Identification Using Homopharma and Network-Based Methods for Predicting Compounds Against Dengue Virus-Infected Cells.

Published in:

Molecules, 2020, v. 25, n. 8, p. 1883, doi. 10.3390/molecules25081883

By:

Hengphasatporn, Kowit;
Plaimas, Kitiporn;
Suratanee, Apichat;
Wongsriphisant, Peemapat;
Yang, Jinn-Moon;
Shigeta, Yasuteru;
Chavasiri, Warinthorn;
Boonyasuppayakorn, Siwaporn;
Rungrotmongkol, Thanyada

Publication type:

Article

Biophysical Screens Identify Fragments That Bind to the Viral DNA-Binding Proteins EBNA1 and LANA.

Published in:

Molecules, 2020, v. 25, n. 7, p. 1760, doi. 10.3390/molecules25071760

By:

Messick, Troy E.;
Tolvinski, Lois;
Zartler, Edward R.;
Moberg, Anna;
Frostell, Åsa;
Smith, Garry R.;
Reitz, Allen B.;
Lieberman, Paul M.;
Stockman, Brian J.

Publication type:

Article

P-TEFb as A Promising Therapeutic Target.

Published in:

Molecules, 2020, v. 25, n. 4, p. 838, doi. 10.3390/molecules25040838

By:

Fujinaga, Koh;
Sanda, Takaomi

Publication type:

Article

(F)uridylylated Peptides Linked to VPg1 of Foot-and- Mouth Disease Virus (FMDV): Design, Synthesis and X-Ray Crystallography of the Complexes with FMDV RNA-Dependent RNA Polymerase.

Published in:

Molecules, 2019, v. 24, n. 13, p. 2360, doi. 10.3390/molecules24132360

By:

de Castro, Sonia;
Ferrer-Orta, Cristina;
Mills, Alberto;
Fernández-Cureses, Gloria;
Gago, Federico;
Verdaguer, Nuria;
Camarasa, María-José;
Seley-Radtke, Katherine L.;
Dayie, Theodore K.

Publication type:

Article

Antiviral Activity of Uridine Derivatives of 2-Deoxy Sugars against Tick-Borne Encephalitis Virus.

Published in:

Molecules, 2019, v. 24, n. 6, p. 1129, doi. 10.3390/molecules24061129

By:

Krol, Ewelina;
Wandzik, Ilona;
Brzuska, Gabriela;
Eyer, Luděk;
Růžek, Daniel;
Szewczyk, Boguslaw;
Tanaka, Hidenori

Publication type:

Article

HIV-1 Integrase-Targeted Short Peptides Derived from a Viral Protein R Sequence.

Published in:

Molecules, 2018, v. 23, n. 8, p. 1858, doi. 10.3390/molecules23081858

By:

Aquaro, Stefano;
Zhao, Xue Zhi;
Burke, Terrence R.;
Métifiot, Mathieu;
Kiselev, Evgeny;
Maddali, Kasthuraiah;
Marchand, Christophe;
Pommier, Yves;
Kessl, Jacques J.;
Kvaratskhelia, Mamuka

Publication type:

Article

HIV Tat/P-TEFb Interaction: A Potential Target for Novel Anti-HIV Therapies.

Published in:

Molecules, 2018, v. 23, n. 4, p. 933, doi. 10.3390/molecules23040933

By:

Asamitsu, Kaori;
Fujinaga, Koh;
Okamoto, Takashi;
Sanda, Takaomi

Publication type:

Article

Design, Synthesis, and Use of Peptides Derived from Human Papillomavirus L1 Protein for the Modification of Gold Electrode Surfaces by Self-Assembled Monolayers.

Published in:

Molecules, 2017, v. 22, n. 11, p. 1970, doi. 10.3390/molecules22111970

By:

Carrillo, John Alejandro Lara;
Medina, Ricardo Fierro;
Rocha, Juan Manríquez;
Bustos, Erika Bustos;
Cepeda, Diego Sebastián Insuasty;
Castañeda, Javier Eduardo García;
Monroy, Zuly Jenny Rivera

Publication type:

Article

MicroRNAs in Cervical Cancer: Evidences for a miRNA Profile Deregulated by HPV and Its Impact on Radio-Resistance.

Published in:

Molecules, 2014, v. 19, n. 5, p. 6263, doi. 10.3390/molecules19056263

By:

Pedroza-Torres, Abraham;
López-Urrutia, Eduardo;
García-Castillo, Verónica;
Jacobo-Herrera, Nadia;
Herrera, Luis A.;
Peralta-Zaragoza, Oscar;
López-Camarillo, César;
De Leon, David Cantú;
Fernández-Retana, Jorge;
Cerna-Cortés, Jorge F.;
Pérez-Plasencia, Carlos

Publication type:

Article