Works matching DE "VIRAL ecology"

Results: 317

To be or not to be a virus: A novel chimeric circular Rep-encoding single stranded DNA virus with interfamilial gene exchange illustrates the considerable evolutionary capacity of ssDNA viruses.

Published in:

PLoS ONE, 2025, v. 20, n. 8, p. 1, doi. 10.1371/journal.pone.0309278

By:

Ben Chéhida, Sélim;
Lacroix, Sylvain;
Hoareau, Murielle;
Fenelon, Babbitha;
Varsani, Arvind;
Martin, Darren P.;
Teycheney, Pierre-Yves;
Lefeuvre, Pierre;
Lett, Jean-Michel

Publication type:

Article

An Italian Single-Center Genomic Surveillance Study: Two-Year Analysis of SARS-CoV-2 Spike Protein Mutations.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 15, p. 7558, doi. 10.3390/ijms26157558

By:

Cecchetto, Riccardo;
Tonon, Emil;
Palmisano, Asia;
Lagni, Anna;
Diani, Erica;
Lotti, Virginia;
Mantoan, Marco;
Montesarchio, Livio;
Palladini, Francesca;
Turri, Giona;
Gibellini, Davide

Publication type:

Article

Unravelling the Viral Hypothesis of Schizophrenia: A Comprehensive Review of Mechanisms and Evidence.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 15, p. 7429, doi. 10.3390/ijms26157429

By:

Sighencea, Mădălina Georgeta;
Trifu, Simona Corina

Publication type:

Article

The biology of the avian influenza virus: A comprehensive review with insights into novel therapeutic strategies.

Published in:

Open Veterinary Journal, 2025, v. 15, n. 7, p. 2925, doi. 10.5455/OVJ.2025.v15.i7.4

By:

Mekkawy, Khaled M.;
Abdalla, Fatma;
Ali, Ahmed A. H.

Publication type:

Article

Passage of human-origin influenza A virus in swine tracheal epithelial cells selects for adaptive mutations in the hemagglutinin gene.

Published in:

PLoS ONE, 2025, v. 20, n. 8, p. 1, doi. 10.1371/journal.pone.0327096

By:

Mo, Jongsuk;
Ferreri, Lucas M.;
Geiger, Ginger;
Perez, Daniel R.;
Rajao, Daniela S.

Publication type:

Article

Metagenomic next-generation sequencing-based characterization of the viral spectrum in clinical pulmonary and peripheral blood samples of patients.

Published in:

Frontiers in Cellular & Infection Microbiology, 2025, p. 1, doi. 10.3389/fcimb.2025.1562965

By:

Zheng, Ning;
Yu, Hai-Long;
Zhang, Bing-Jie;
Wang, Dan;
Ji, Ya-Liang;
Dai, Lu-Lu;
Li, Wen;
Li, Sheng-Hui;
Hu, Zhi-Liang;
Zheng, Yi-Shan

Publication type:

Article

Spike substitutions E484D, P812R and Q954H mediate ACE2-independent entry of SARS-CoV-2 across different cell lines.

Published in:

PLoS ONE, 2025, v. 20, n. 8, p. 1, doi. 10.1371/journal.pone.0326419

By:

Vizgirda, Greta;
Underwood, Alexander P.;
Fahnøe, Ulrik;
Weis, Nina;
Ramirez, Santseharay;
Bukh, Jens

Publication type:

Article

The contribution of integrated and non-integrated pig farms to epidemiological dynamics of porcine reproductive and respiratory syndrome virus in Italy.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-13388-3

By:

Ustulin, M.;
Vio, D.;
Targhetta, C.;
Zanon, C.;
Ferino, L.;
Faustini, G.;
Franzo, G.

Publication type:

Article

The interplay of nitrogen sources and viral communities in the biodegradation of atrazine in agricultural soils.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1645559

By:

Wang, Yongfeng;
Radosevich, Mark;
Yang, Lu;
Zhang, Ying;
Xie, Ninghui;
Liang, Xiaolong

Publication type:

Article

Improved Bacteriophage Genome Data is Necessary for Integrating Viral and Bacterial Ecology.

Published in:

Microbial Ecology, 2014, v. 67, n. 2, p. 242, doi. 10.1007/s00248-013-0325-x

By:

Bibby, Kyle

Publication type:

Article

Growth Response of Soda Lake Bacterial Communities to Simulated Rainfall.

Published in:

Microbial Ecology, 2008, v. 55, n. 2, p. 194, doi. 10.1007/s00248-007-9267-5

By:

Krammer, M.;
Velimirov, B.;
Fischer, U.;
Farnleitner, A. H.;
Herzig, A.;
Kirschner, A. K. T.

Publication type:

Article

Viral ecologies: Resurgent nature, COVID-19 and the discourse of transgender contagion.

Published in:

Environment & Planning E: Nature & Space, 2024, v. 7, n. 6, p. 2343, doi. 10.1177/25148486241284176

By:

Brice, Sage;
McNulty, Felix

Publication type:

Article

Virus infection and grazing exert counteracting influences on survivorship of native bunchgrass seedlings competing with invasive exotics.

Published in:

Journal of Ecology, 2006, v. 94, n. 2, p. 264, doi. 10.1111/j.1365-2745.2006.01101.x

By:

Malmstrom, C. M.;
Stoner, C. J.;
Brandenburg, S.;
Newton, L. A.

Publication type:

Article

Spectral aesthetics: cultivating a viral ecology.

Published in:

Culture, Theory & Critique, 2021, v. 62, n. 4, p. 390, doi. 10.1080/14735784.2022.2084129

By:

Yang, Xiaoli

Publication type:

Article

Replication of Rift Valley Fever Virus in Amphibian and Reptile-Derived Cell Lines.

Published in:

Pathogens, 2021, v. 10, n. 6, p. 681, doi. 10.3390/pathogens10060681

By:

Rissmann, Melanie;
Lenk, Matthias;
Stoek, Franziska;
Szentiks, Claudia A.;
Eiden, Martin;
Groschup, Martin H.

Publication type:

Article

Avian Influenza in Wild Birds and Poultry: Dissemination Pathways, Monitoring Methods, and Virus Ecology.

Published in:

Pathogens, 2021, v. 10, n. 5, p. 630, doi. 10.3390/pathogens10050630

By:

Blagodatski, Artem;
Trutneva, Kseniya;
Glazova, Olga;
Mityaeva, Olga;
Shevkova, Liudmila;
Kegeles, Evgenii;
Onyanov, Nikita;
Fede, Kseniia;
Maznina, Anna;
Khavina, Elena;
Yeo, Seon-Ju;
Park, Hyun;
Volchkov, Pavel;
Ogawa, Haruko;
Takeda, Yohei

Publication type:

Article

Animal Virus Ecology and Evolution Are Shaped by the Virus Host-Body Infiltration and Colonization Pattern.

Published in:

Pathogens, 2019, v. 8, n. 2, p. 72, doi. 10.3390/pathogens8020072

By:

Slingenbergh, Jan

Publication type:

Article

Viruses of Plankton: On the Edge of the Viral Frontier.

Published in:

Microorganisms, 2024, v. 12, n. 1, p. 31, doi. 10.3390/microorganisms12010031

By:

Mojica, Kristina D. A.;
Brussaard, Corina P. D.

Publication type:

Article

Special Issue "Ecology of Influenza A Viruses": Editorial.

Published in:

2023

By:

De Marco, Maria Alessandra;
Delogu, Mauro;
Cotti, Claudia

Publication type:

Editorial

Record-Breaking Rain Event Altered Estuarine Viral Assemblages.

Published in:

Microorganisms, 2022, v. 10, n. 4, p. N.PAG, doi. 10.3390/microorganisms10040729

By:

Woods, Alaina C.;
Walker, Jordan R.;
Jackson, Cameron D.;
Labonté, Jessica M.

Publication type:

Article

Ecology of Powassan Virus in the United States.

Published in:

Microorganisms, 2021, v. 9, n. 11, p. 2317, doi. 10.3390/microorganisms9112317

By:

Hassett, Erin M.;
Thangamani, Saravanan

Publication type:

Article

Special Issue "Plant Viruses: From Ecology to Control".

Published in:

2021

By:

Navas-Castillo, Jesús;
Fiallo-Olivé, Elvira

Publication type:

Editorial

Ecology, physiology and genetics of a phycodnavirus infecting the noxious bloom-forming raphidophyte Heterosigma akashiwo.

Published in:

Fisheries Science, 2008, v. 74, n. 4, p. 701, doi. 10.1111/j.1444-2906.2008.01580.x

By:

Tomaru, Yuji;
Shirai, Yoko;
Nagasaki, Keizo

Publication type:

Article

Molecular characterization of human respiratory syncytial virus in Mexico (season 2023–2024) through whole-genome sequencing.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-13061-9

By:

Rivera-Toledo, Evelyn;
Mejıa-Nepomuceno, Fidencio;
Mendoza-Ramırez, Enrique;
Vera-Jimenez, America;
Becerril-Vargas, Eduardo;
Ahumada-Topete, Victor Hugo;
Castillejos-Lopez, Manuel;
Perez-Orozco, Francisco Bernardo;
Benitez, Geovanni;
Salazar-Lezama, Miguel Ángel;
Cadeza-Aguilar, Josue Daniel;
Garcia-Colin, Emma;
Garrido-Galindo, Claudia;
Regalado-Pineda, Justino;
Collins, John P.;
Lu, Xiang-Jun;
Wickiser, J. Kenneth;
Vazquez-Perez, Joel Armando

Publication type:

Article

Genus Culex Linnaeus, 1758 (Diptera: Culicidae) as an Important Potential Arbovirus Vector in Brazil: An Integrative Review.

Published in:

Life (2075-1729), 2023, v. 13, n. 11, p. 2179, doi. 10.3390/life13112179

By:

Reis, Lúcia Aline Moura;
Pampolha, Ana Beatriz Oliveira;
Nascimento, Bruna Lais Sena do;
Dias, Daniel Damous;
Araújo, Pedro Arthur da Silva;
Silva, Fábio Silva da;
Silva, Lucas Henrique da Silva e;
Reis, Hanna Carolina Farias;
Silva, Eliana Vieira Pinto da;
Nunes Neto, Joaquim Pinto

Publication type:

Article

Host–virus shift of the sphingolipid pathway along an Emiliania huxleyi bloom: survival of the fattest.

Published in:

Environmental Microbiology, 2009, v. 11, n. 11, p. 2840, doi. 10.1111/j.1462-2920.2009.02006.x

By:

Pagarete, António;
Allen, Michael J.;
Wilson, William H.;
Kimmance, Susan A.;
de Vargas, Colomban

Publication type:

Article

Comparative analysis of the widespread and conserved PB1-like viruses infecting Pseudomonas aeruginosa.

Published in:

Environmental Microbiology, 2009, v. 11, n. 11, p. 2874, doi. 10.1111/j.1462-2920.2009.02030.x

By:

Ceyssens, Pieter-Jan;
Miroshnikov, Konstantin;
Mattheus, Wesley;
Krylov, Victor;
Robben, Johan;
Noben, Jean-Paul;
Vanderschraeghe, Simon;
Sykilinda, Nina;
Kropinski, Andrew M.;
Volckaert, Guido;
Mesyanzhinov, Vadim;
Lavigne, Rob

Publication type:

Article

Viral biogeography revealed by signatures in Sulfolobus islandicus genomes.

Published in:

Environmental Microbiology, 2009, v. 11, n. 2, p. 457, doi. 10.1111/j.1462-2920.2008.01784.x

By:

Held, Nicole L.;
Whitaker, Rachel J.

Publication type:

Article

Unveiling the unknown viral world in groundwater.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-51230-y

By:

Wu, Zongzhi;
Liu, Tang;
Chen, Qian;
Chen, Tianyi;
Hu, Jinyun;
Sun, Liyu;
Wang, Bingxue;
Li, Wenpeng;
Ni, Jinren

Publication type:

Article

SpatMCDA: An R package for assessing areas at risk of infectious diseases based on spatial multi‐criteria decision analysis.

Published in:

Methods in Ecology & Evolution, 2024, v. 15, n. 8, p. 1302, doi. 10.1111/2041-210X.14364

By:

Wang, Haoran;
Zeng, Jiankai;
Gao, Xiang;
Wang, Hongbin;
Xiao, Jianhua

Publication type:

Article

The dynamics of a two host-two virus system in a chemostat environment.

Published in:

Discrete & Continuous Dynamical Systems - Series B, 2021, v. 26, n. 1, p. 415, doi. 10.3934/dcdsb.2020298

By:

Hsu, Sze-Bi;
Jin, Yu

Publication type:

Article

On Rooting and Dating Viral Trees With a Changing Evolutionary Rate Following Host-Switching Open Access.

Published in:

Genome Biology & Evolution, 2025, v. 17, n. 7, p. 1, doi. 10.1093/gbe/evaf134

By:

Xia, Xuhua

Publication type:

Article

Review of Climate, Landscape, and Viral Genetics as Drivers of the Japanese Encephalitis Virus Ecology.

Published in:

PLoS Neglected Tropical Diseases, 2013, v. 7, n. 9, p. 1, doi. 10.1371/journal.pntd.0002208

By:

Le Flohic, Guillaume;
Porphyre, Vincent;
Barbazan, Philippe;
Gonzalez, Jean-Paul

Publication type:

Article

Review of Climate, Landscape, and Viral Genetics as Drivers of the Japanese Encephalitis Virus Ecology.

Published in:

PLoS Neglected Tropical Diseases, 2013, v. 7, n. 9, p. 1, doi. 10.1371/journal.pntd.0002208

By:

Le Flohic, Guillaume;
Porphyre, Vincent;
Barbazan, Philippe;
Gonzalez, Jean-Paul

Publication type:

Article

Isolation of Irkut Virus from a Murina leucogaster Bat in China.

Published in:

PLoS Neglected Tropical Diseases, 2013, v. 7, n. 3, p. 1, doi. 10.1371/journal.pntd.0002097

By:

Liu, Ye;
Zhang, Shoufeng;
Zhao, Jinghui;
Zhang, Fei;
Hu, Rongliang

Publication type:

Article

Discovery of Jogalong virus, a novel hepacivirus identified in a Culex annulirostris (Skuse) mosquito from the Kimberley region of Western Australia.

Published in:

PLoS ONE, 2020, v. 15, n. 1, p. N.PAG, doi. 10.1371/journal.pone.0227114

By:

Williams, Simon H.;
Levy, Avram;
Yates, Rachel A.;
Somaweera, Nilusha;
Neville, Peter J.;
Nicholson, Jay;
Lindsay, Michael D. A.;
Mackenzie, John S.;
Jain, Komal;
Imrie, Allison;
Smith, David W.;
Lipkin, W. Ian

Publication type:

Article

Flowers as viral hot spots: Honey bees (Apis mellifera) unevenly deposit viruses across plant species.

Published in:

PLoS ONE, 2019, v. 14, n. 9, p. 1, doi. 10.1371/journal.pone.0221800

By:

Alger, Samantha A.;
Burnham, P. Alexander;
Brody, Alison K.

Publication type:

Article

Mapping Multiple Wild Pig Species' Population Dynamics in Southeast Asia During the African Swine Fever Outbreak (2018–2024).

Published in:

Conservation Letters, 2025, v. 18, n. 3, p. 1, doi. 10.1111/conl.13105

By:

Lieb, Zoë E.;
Meijaard, Erik;
Brodie, Jedediah F.;
Shabrani, Adi;
Mohd‐Azlan, Jayasilan;
Supriatna, Jatna;
Struebig, Matthew John;
Deere, Nicolas J.;
Spencer, Katie L.;
Heon, Suipeng;
Wong, Lok‐Jinn;
Juiling, Suzika;
Hearn, Andrew;
Coudrat, Camille N. Z.;
Jati, Agus Sudibyo;
Linkie, Matthew;
Ngoprasert, Dusit;
Das, Dhritiman;
Wearn, Oliver R.;
Gray, Russell J.

Publication type:

Article

Living in a Material (Covid-19) World: Covid-19, Materialities, and Quotidian Geographies in the Philippines.

Published in:

Material Culture, 2022, v. 54, n. 1, p. 23

By:

De Guzman, Mylene T.;
Palis, Joseph;
Garcia, Emmanuel B.

Publication type:

Article

The challenge of using experimental infectivity data in risk assessment for Ebola virus: why ecology may be important.

Published in:

Journal of Applied Microbiology, 2016, v. 120, n. 1, p. 17, doi. 10.1111/jam.12973

By:

Gale, P.;
Simons, R.R.L.;
Horigan, V.;
Snary, E.L.;
Fooks, A.R.;
Drew, T.W.

Publication type:

Article

Leveraging insect-specific viruses to elucidate mosquito population structure and dynamics.

Published in:

PLoS Pathogens, 2023, v. 19, n. 8, p. 1, doi. 10.1371/journal.ppat.1011588

By:

Hollingsworth, Brandon D.;
Grubaugh, Nathan D.;
Lazzaro, Brian P.;
Murdock, Courtney C.

Publication type:

Article

Ancient Host-Virus Gene Transfer Hints at a Diverse Pre-LECA Virosphere.

Published in:

Journal of Molecular Evolution, 2025, v. 93, n. 3, p. 295, doi. 10.1007/s00239-025-10246-8

By:

Karki, Sangita;
Barth, Zachary K.;
Aylward, Frank O.

Publication type:

Article

A novel deep-sea bacteriophage possesses features of Wbeta-like viruses and prophages.

Published in:

Archives of Virology, 2020, v. 165, n. 5, p. 1219, doi. 10.1007/s00705-020-04579-6

By:

Chen, Yulei;
Guo, Xun;
Wu, Jie;
Jin, Min;
Zeng, Runying

Publication type:

Article

Middle East respiratory syndrome coronavirus (MERS-CoV): evidence and speculations.

Published in:

Archives of Virology, 2014, v. 159, n. 7, p. 1575, doi. 10.1007/s00705-014-1995-5

By:

Abdel-Moneim, Ahmed

Publication type:

Article

Genomic characterization of Ambrosia asymptomatic virus 1 and evidence of other Tymovirales members in the Oklahoma tallgrass prairie revealed by sequence analysis.

Published in:

Archives of Virology, 2014, v. 159, n. 7, p. 1755, doi. 10.1007/s00705-014-1985-7

By:

Dutta, Mukta;
Sokhandan Bashir, Nemat;
Palmer, Michael;
Melcher, Ulrich

Publication type:

Article

Characterization of a natural Plum pox virus isolate bearing a truncated coat protein.

Published in:

Archives of Virology, 2009, v. 154, n. 1, p. 141, doi. 10.1007/s00705-008-0281-9

By:

Szathmáry, Erzsébet;
Nádudvari, Júlia;
Szabó, László;
Tóbiás, István;
Balázs, Ervin;
Palkovics, László

Publication type:

Article

Cross‐protection against pepino mosaic virus, more than a decade of efficient disease control.

Published in:

Annals of Applied Biology, 2024, v. 184, n. 2, p. 174, doi. 10.1111/aab.12884

By:

Hernando, Yolanda;
Aranda, Miguel A.

Publication type:

Article

The smallest in the deepest: the enigmatic role of viruses in the deep biosphere.

Published in:

National Science Review, 2023, v. 10, n. 4, p. 1, doi. 10.1093/nsr/nwad009

By:

Cai, Lanlan;
Weinbauer, Markus G;
Xie, Le;
Zhang, Rui

Publication type:

Article

Increased public health threat of avian-origin H3N2 influenza virus caused by its evolution in dogs.

Published in:

eLife, 2023, p. 1, doi. 10.7554/eLife.83470

By:

Mingyue Chen;
Yanli Lyu;
Fan Wu;
Ying Zhang;
Hongkui Li;
Rui Wang;
Yang Liu;
Xinyu Yang;
Liwei Zhou;
Ming Zhang;
Qi Tong;
Honglei Sun;
Juan Pu;
Jinhua Liu;
Yipeng Sun

Publication type:

Article

Previously unknown ssDNA molecules co‐occurring with CdebDNAV infecting the marine planktonic diatom Chaetoceros debilis.

Published in:

Phycological Research, 2020, v. 68, n. 4, p. 269, doi. 10.1111/pre.12435

By:

Tomaru, Yuji;
Toyoda, Kensuke;
Kimura, Kei

Publication type:

Article