Works matching DE "TRANSCRIPTIONAL repressor CTCF"

Results: 114

Neuronal fate specification by the Dbx1 transcription factor is linked to the evolutionary acquisition of a novel functional domain.

Published in:

EvoDevo, 2016, v. 7, p. 1, doi. 10.1186/s13227-016-0055-5

By:

Karaz, Sonia;
Courgeon, Maximilien;
Lepetit, Hélène;
Bruno, Eugenia;
Pannone, Raimondo;
Tarallo, Andrea;
Thouzé, France;
Kerner, Pierre;
Vervoort, Michel;
Causeret, Frédéric;
Pierani, Alessandra;
D'Onofrio, Giuseppe

Publication type:

Article

The emerging role of noncoding RNA in prostate cancer progression and its implication on diagnosis and treatment.

Published in:

Briefings in Functional Genomics, 2016, v. 15, n. 3, p. 257, doi. 10.1093/bfgp/elv057

By:

Takayama, Ken-ichi;
Inoue, Satoshi

Publication type:

Article

Lentivirus-mediated knockdown of MeCP2 inhibits the growth of colorectal cancer cells in vitro.

Published in:

Molecular Medicine Reports, 2016, v. 13, n. 1, p. 860, doi. 10.3892/mmr.2015.4612

By:

NING SONG;
KEQIANG LI;
YAN WANG;
ZONGYOU CHEN;
LIUBIN SHI

Publication type:

Article

Control of directionality of chromatin folding for the inter- and intra-domain contacts at the Tfap2c–Bmp7 locus.

Published in:

Epigenetics & Chromatin, 2018, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13072-018-0221-1

By:

Tsujimura, Taro;
Takase, Osamu;
Yoshikawa, Masahiro;
Sano, Etsuko;
Hayashi, Matsuhiko;
Takato, Tsuyoshi;
Toyoda, Atsushi;
Okano, Hideyuki;
Hishikawa, Keiichi

Publication type:

Article

Activation of the alpha-globin gene expression correlates with dramatic upregulation of nearby non-globin genes and changes in local and large-scale chromatin spatial structure.

Published in:

Epigenetics & Chromatin, 2017, v. 10, p. 1, doi. 10.1186/s13072-017-0142-4

By:

Ulianov, Sergey V.;
Galitsyna, Aleksandra A.;
Flyamer, Ilya M.;
Golov, Arkadiy K.;
Khrameeva, Ekaterina E.;
Imakaev, Maxim V.;
Abdennur, Nezar A.;
Gelfand, Mikhail S.;
Gavrilov, Alexey A.;
Razin, Sergey V.

Publication type:

Article

Links between DNA methylation and nucleosome occupancy in the human genome.

Published in:

Epigenetics & Chromatin, 2017, v. 10, p. 1, doi. 10.1186/s13072-017-0125-5

By:

Collings, Clayton K.;
Anderson, John N.

Publication type:

Article

Bcl6aa and bcl6ab are ubiquitously expressed and are inducible by lipopolysaccharide and polyI:C in adult tissues of medaka Oryzias latipes.

Published in:

Journal of Experimental Zoology Part B: Molecular & Developmental Evolution, 2019, v. 332, n. 1/2, p. 17, doi. 10.1002/jez.b.22843

By:

Zhang, Runshuai;
Wu, Kongyue;
Ke, Xiaomei;
Zhang, Xueyan;
Xu, Gongyu;
Shen, Hao;
Nibona, Emile;
Al Hafiz, Abdullah;
Liang, Xiaoting;
Wang, Zequn;
Qi, Chao;
Zhou, Qingchun;
Zhong, Xueping;
Zhao, Haobin

Publication type:

Article

CTCF Governs the Identity and Migration of MGE-Derived Cortical Interneurons.

Published in:

Journal of Neuroscience, 2019, v. 39, n. 1, p. 177, doi. 10.1523/JNEUR0SCI.3496-17.2018

By:

Elbert, Adrienne;
Vogt, Daniel;
Watson, Ashley;
Levy, Michael;
Yan Jiang;
Brûlé, Emilie;
Rowland, Megan E.;
Rubenstein, John;
Berube, Nathalie G.

Publication type:

Article

Remote Memory and Cortical Synaptic Plasticity Require Neuronal CCCTC-Binding Factor (CTCF).

Published in:

Journal of Neuroscience, 2018, v. 38, n. 22, p. 5042, doi. 10.1523/JNEUROSCI.2738-17.2018

By:

Somi Kim;
Nam-Kyung Yu;
Kyu-Won Shim;
Ji-il Kim;
Hyopil Kim;
Dae Hee Han;
Ja Eun Choi;
Seung-Woo Lee;
Dong Il Choi;
Myung Won Kim;
Dong-Sung Lee;
Kyungmin Lee;
Niels Galjart;
Yong-Seok Lee;
Jae-Hyung Lee;
Bong-Kiun Kaang

Publication type:

Article

Dopamine Triggers CTCF-Dependent Morphological and Genomic Remodeling of Astrocytes.

Published in:

Journal of Neuroscience, 2018, v. 38, n. 21, p. 4846, doi. 10.1523/JNEUROSCI.3349-17.2018

By:

O'Donovan, Bernadette;
Critchfield, Peyton;
Ortinski, Pavel I.;
Galloway, Ashley;
Adeluyi, Adewale;
Fisher, Miranda L.;
Rao, Chintada Nageswara;
Sajish, Mathew;
Turner, Jill R.

Publication type:

Article

Downregulation of Spermine Augments Dendritic Persistent Sodium Currents and Synaptic Integration after Status Epilepticus.

Published in:

Journal of Neuroscience, 2015, v. 35, n. 46, p. 15240, doi. 10.1523/JNEUROSCI.0493-15.2015

By:

Royeck, Michel;
Kelly, Tony;
Opitz, Thoralf;
Otte, David-Marian;
Rennhack, Andreas;
Woitecki, Anne;
Pitsch, Julika;
Becker, Albert;
Schoch, Susanne;
Kaupp, Ulrich Benjamin;
Yaari, Yoel;
Zimmer, Andreas;
Beck, Heinz

Publication type:

Article

Functional role of dimerization and CP190 interacting domains of CTCF protein in Drosophila melanogaster.

Published in:

BMC Biology, 2015, v. 13, n. 1, p. 1, doi. 10.1186/s12915-015-0168-7

By:

Bonchuk, Artem;
Maksimenko, Oksana;
Kyrchanova, Olga;
Ivlieva, Tatyana;
Mogila, Vladic;
Deshpande, Girish;
Wolle, Daniel;
Schedl, Paul;
Georgiev, Pavel

Publication type:

Article

A chromatin code for alternative splicing involving a putative association between CTCF and HP1α proteins.

Published in:

BMC Biology, 2015, v. 13, n. 1, p. 1, doi. 10.1186/s12915-015-0141-5

By:

Agirre, Eneritz;
Bellora, Nicolás;
Alló, Mariano;
Pagès, Amadís;
Bertucci, Paola;
Kornblihtt, Alberto R.;
Eyras, Eduardo

Publication type:

Article

Correction: The TIE1 transcriptional repressor controls shoot branching by directly repressing BRANCHED1 in Arabidopsis.

Published in:

2018

By:

Yang, Yan;
Nicolas, Michael;
Zhang, Jinzhe;
Yu, Hao;
Guo, Dongshu;
Yuan, Rongrong;
Zhang, Tiantian;
Yang, Jianzhao;
Cubas, Pilar;
Qin, Genji

Publication type:

Correction Notice

The evolution of transcriptional repressors in the Notch signaling pathway: a computational analysis.

Published in:

Hereditas, 2019, v. 156, n. 1, p. N.PAG, doi. 10.1186/s41065-019-0081-0

By:

Maier, Dieter

Publication type:

Article

Expression profile and promoter analysis of HEPIS.

Published in:

Experimental & Therapeutic Medicine, 2018, v. 15, n. 1, p. 569, doi. 10.3892/etm.2017.5374

By:

Hu, Fen;
Zhang, Yunfeng

Publication type:

Article

Metabolic engineering of E. coli for the production of O-succinyl-L-homoserine with high yield.

Published in:

3 Biotech, 2018, v. 8, n. 7, p. 1, doi. 10.1007/s13205-018-1332-x

By:

Huang, Jian-Feng;
Zhang, Bo;
Shen, Zhen-Yang;
Liu, Zhi-Qiang;
Zheng, Yu-Guo

Publication type:

Article

Exploring the changing landscape of cell-to-cell variation after CTCF knockdown via single cell RNA-seq.

Published in:

BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-6379-5

By:

Wang, Wei;
Ren, Gang;
Hong, Ni;
Jin, Wenfei

Publication type:

Article

Androgen receptor functions as transcriptional repressor of cancer-associated fibroblast activation.

Published in:

2018

By:

Clocchiatti, Andrea;
Ghosh, Soumitra;
Procopio, Maria-Giuseppina;
Mazzeo, Luigi;
Bordignon, Pino;
Ostano, Paola;
Goruppi, Sandro;
Bottoni, Giulia;
Katarkar, Atul;
Levesque, Mitchell;
Kölblinger, Peter;
Dummer, Reinhard;
Neel, Victor;
Özdemir, Berna C.;
Dotto, G. Paolo

Publication type:

journal article

Pokemon decreases the transcriptional activity of RARα in the absence of ligand.

Published in:

Biological Chemistry, 2017, v. 398, n. 3, p. 331, doi. 10.1515/hsz-2016-0142

By:

Yutao Yang;
Yueting Li;
Fei Di;
Jiajun Cui;
Yue Wang;
Xu, Zhi-Qing David

Publication type:

Article

A Zinc Finger Transcriptional Repressor Confers Pleiotropic Effects on Rice Growth and Drought Tolerance by Down-Regulating Stress-Responsive Genes.

Published in:

Plant & Cell Physiology, 2018, v. 59, n. 10, p. 2129, doi. 10.1093/pcp/pcy133

By:

Yuan, Xi;
Huang, Peng;
Wang, Ruqin;
Li, Haoyuan;
Lv, Xueqing;
Duan, Min;
Tang, Haijuan;
Zhang, Hongsheng;
Huang, Ji

Publication type:

Article

Assessing the Role of ETHYLENE RESPONSE FACTOR Transcriptional Repressors in Salicylic Acid-Mediated Suppression of Jasmonic Acid-Responsive Genes.

Published in:

Plant & Cell Physiology, 2017, v. 58, n. 2, p. 266, doi. 10.1093/pcp/pcw187

By:

Caarls, Lotte;
Van der Does, Dieuwertje;
Hickman, Richard;
Jansen, Wouter;
Van Verk, Marcel C.;
Proietti, Silvia;
Lorenzo, Oscar;
Solano, Roberto;
Pieterse, Corné M. J.;
Van Wees, Saskia C. M.

Publication type:

Article

Drought-Up-Regulated TaNAC69-1 is a Transcriptional Repressor of TaSHY2 and TaIAA7, and Enhances Root Length and Biomass in Wheat.

Published in:

Plant & Cell Physiology, 2016, v. 57, n. 10, p. 2076, doi. 10.1093/pcp/pcw126

By:

Dandan Chen;
Richardson, Terese;
Shoucheng Chai;
McIntyre, C. Lynne;
Rae, Anne L.;
Gang-Ping Xue

Publication type:

Article

Similarities in the structure of the transcriptional repressor AmtR in two different space groups suggest a model for the interaction with GlnK.

Published in:

Acta Crystallographica: Section F, Structural Biology Communications, 2017, v. 73, n. 3, p. 146, doi. 10.1107/S2053230X17002485

By:

Sevvana, Madhumati;
Hasselt, Kristin;
Grau, Florian C.;
Burkovski, Andreas;
Muller, Yves A.

Publication type:

Article

The Diverging Routes of BORIS and CTCF: An Interactomic and Phylogenomic Analysis.

Published in:

Life (2075-1729), 2018, v. 8, n. 1, p. 4, doi. 10.3390/life8010004

By:

Jabbari, Kamel;
Heger, Peter;
Sharma, Ranu;
Wiehe, Thomas

Publication type:

Article

Ets-2 Acts As a Transcriptional Repressor of the Human Immunodeficiency Virus Type 1 through Binding to a Repressor--Activator Target Sequence of 5'-LTR.

Published in:

Frontiers in Immunology, 2018, p. 1, doi. 10.3389/fimmu.2017.01924

By:

Panagoulias, Ioannis;
Karagiannis, Fotios;
Aggeletopoulou, Ioanna;
Georgakopoulos, Tassos;
Argyropoulos, Christos P.;
Akinosoglou, Karolina;
Gogos, Charalambos;
Skoutelis, Athanasios;
Mouzaki, Athanasia

Publication type:

Article

Disruption of CTCF/cohesin-mediated high-order chromatin structures by DNA methylation downregulates PTGS2 expression.

Published in:

Oncogene, 2015, v. 34, n. 45, p. 5677, doi. 10.1038/onc.2015.17

By:

Kang, J Y;
Song, S H;
Yun, J;
Jeon, M S;
Kim, H P;
Han, S W;
Kim, T Y

Publication type:

Article

OFP1 Interaction with ATH1 Regulates Stem Growth, Flowering Time and Flower Basal Boundary Formation in Arabidopsis.

Published in:

Genes, 2018, v. 9, n. 8, p. 399, doi. 10.3390/genes9080399

By:

Sun, Lili;
Zhang, Shuquan;
Xie, Dongwei;
Liang, Chunbo;
Huang, Wengong;
Fan, Lijuan;
Fang, Yuyan;
Zhang, Liguo;
Chang, Ying;
Zhang, Xiaofei

Publication type:

Article

Making Sense of the Tangle: Insights into Chromatin Folding and Gene Regulation.

Published in:

Genes, 2016, v. 7, n. 10, p. 71, doi. 10.3390/genes7100071

By:

Ill-Min Chung;
Ketharnathan, Sarada;
Seung-Hyun Kim;
Thiruvengadam, Muthu;
Rani, Mari Kavitha;
Rajakumar, Govindasamy

Publication type:

Article

Test Yourself #4, 2017.

Published in:: Journal of the Association of Genetic Technologists, 2017, v. 43, n. 4, p. 218
Publication type:: Article

CTCF-Mediated and Pax6-Associated Gene Expression in Corneal Epithelial Cell-Specific Differentiation.

Published in:

PLoS ONE, 2016, v. 11, n. 9, p. 1, doi. 10.1371/journal.pone.0162071

By:

Tsui, Shanli;
Wang, Jie;
Wang, Ling;
Dai, Wei;
Lu, Luo

Publication type:

Article

CTCF and Cohesin<sup>SA-1</sup> Mark Active Promoters and Boundaries of Repressive Chromatin Domains in Primary Human Erythroid Cells.

Published in:

PLoS ONE, 2016, v. 11, n. 5, p. 1, doi. 10.1371/journal.pone.0155378

By:

Steiner, Laurie A.;
Schulz, Vincent;
Makismova, Yelena;
Lezon-Geyda, Kimberly;
Gallagher, Patrick G.

Publication type:

Article

Tgif1 and Tgif2 Regulate Axial Patterning in Mouse.

Published in:

PLoS ONE, 2016, v. 11, n. 5, p. 1, doi. 10.1371/journal.pone.0155837

By:

Melhuish, Tiffany A.;
Taniguchi, Kenichiro;
Wotton, David

Publication type:

Article

Role of CTCF in Regulating SLC45A3-ELK4 Chimeric RNA.

Published in:

PLoS ONE, 2016, v. 11, n. 3, p. 1, doi. 10.1371/journal.pone.0150382

By:

Qin, Fujun;
Song, Yansu;
Zhang, Yanmei;
Facemire, Loryn;
Frierson, Henry;
Li, Hui

Publication type:

Article

MiR-1303 Regulates Mycobacteria Induced Autophagy by Targeting Atg2B.

Published in:

PLoS ONE, 2016, v. 11, n. 1, p. 1, doi. 10.1371/journal.pone.0146770

By:

Au, Kin Yi;
Pong, John C. H.;
Ling, Wai Lim;
Li, James C. B.

Publication type:

Article

Corrigendum: Transcriptional regulator PRDM12 is essential for human pain perception.

Published in:

Nature Genetics, 2015, v. 47, n. 8, p. 962, doi. 10.1038/ng0815-962b

By:

Chen, Ya-Chun;
Auer-Grumbach, Michaela;
Matsukawa, Shinya;
Zitzelsberger, Manuela;
Themistocleous, Andreas C;
Strom, Tim M;
Samara, Chrysanthi;
Moore, Adrian W;
Cho, Lily Ting-Yin;
Young, Gareth T;
Weiss, Caecilia;
Schabhüttl, Maria;
Stucka, Rolf;
Schmid, Annina B;
Parman, Yesim;
Graul-Neumann, Luitgard;
Heinritz, Wolfram;
Passarge, Eberhard;
Watson, Rosemarie M;
Hertz, Jens Michael

Publication type:

Article

CTCF Expression is Essential for Somatic Cell Viability and Protection Against Cancer.

Published in:

International Journal of Molecular Sciences, 2018, v. 19, n. 12, p. 3832, doi. 10.3390/ijms19123832

By:

Bailey, Charles G;
Metierre, Cynthia;
Feng, Yue;
Baidya, Kinsha;
Filippova, Galina N;
Loukinov, Dmitri I;
Lobanenkov, Victor V;
Semaan, Crystal;
Rasko, John EJ

Publication type:

Article

DNA Supercoiling, Topoisomerases, and Cohesin: Partners in Regulating Chromatin Architecture?

Published in:

International Journal of Molecular Sciences, 2018, v. 19, n. 3, p. 884, doi. 10.3390/ijms19030884

By:

Björkegren, Camilla;
Baranello, Laura

Publication type:

Article

Identification of the Tolfenamic Acid Binding Pocket in PrbP from Liberibacter asiaticus.

Published in:

Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.01591

By:

Lei Pan;
Gardner, Christopher L.;
Pagliai, Fernando A.;
Gonzalez, Claudio F.;
Lorca, Graciela L.

Publication type:

Article

Interferon alpha bioactivity critically depends on Scavenger receptor class B type I function.

Published in:

OncoImmunology, 2016, v. 5, n. 8, p. 1, doi. 10.1080/2162402X.2016.1196309

By:

Vasquez, Marcos;
Fioravanti, Jessica;
Aranda, Fernando;
Paredes, Vladimir;
Gomar, Celia;
Ardaiz, Nuria;
Fernandez-Ruiz, Veronica;
Méndez, Miriam;
Nistal-Villan, Estanislao;
Larrea, Esther;
Gao, Qinshan;
Gonzalez-Aseguinolaza, Gloria;
Prieto, Jesus;
Berraondo, Pedro

Publication type:

Article

Znf76 is associated with development of the eyes, midbrain, MHB, and hindbrain in zebrafish embryos.

Published in:

Animal Cells & Systems, 2019, v. 23, n. 1, p. 26, doi. 10.1080/19768354.2018.1557744

By:

Jung, Jangham;
Udhaya Kumar, S.;
Choi, Issac;
Huh, Tea-Lin;
Rhee, Myungchull

Publication type:

Article

RGG boxes within the TET/FET family of RNA-binding proteins are functionally distinct.

Published in:

Transcription (2154-1264), 2016, v. 7, n. 4, p. 141, doi. 10.1080/21541264.2016.1183071

By:

Chau, Bess Ling;
Ng, King Pan;
Li, Kim K C;
Lee, Kevin A.W.

Publication type:

Article

CTCF regulates NELF, DSIF and P-TEFb recruitment during transcription.

Published in:

Transcription (2154-1264), 2015, v. 6, n. 5, p. 79, doi. 10.1080/21541264.2015.1095269

By:

Laitem, Clélia;
Zaborowska, Justyna;
Tellier, Michael;
Yamaguchi, Yuki;
Cao, Qingfu;
Egloff, Sylvain;
Handa, Hiroshi;
Murphy, Shona

Publication type:

Article

Discovering a binary CTCF code with a little help from BORIS.

Published in:

Nucleus (1949-1034), 2018, v. 9, n. 1, p. 33, doi. 10.1080/19491034.2017.1394536

By:

Lobanenkov, Victor V.;
Zentner, Gabriel E.

Publication type:

Article

Extrusion without a motor: a new take on the loop extrusion model of genome organization.

Published in:

Nucleus (1949-1034), 2018, v. 9, n. 1, p. 95, doi. 10.1080/19491034.2017.1421825

By:

Brackley, C. A.;
Johnson, J.;
Michieletto, D.;
Morozov, A. N.;
Nicodemi, M.;
Cook, P. R.;
Marenduzzo, D.

Publication type:

Article

Recent evidence that TADs and chromatin loops are dynamic structures.

Published in:

Nucleus (1949-1034), 2018, v. 9, n. 1, p. 20, doi. 10.1080/19491034.2017.1389365

By:

Hansen, Anders S.;
Cattoglio, Claudia;
Darzacq, Xavier;
Tjian, Robert

Publication type:

Article

The connection between BRG1, CTCF and topoisomerases at TAD boundaries.

Published in:

Nucleus (1949-1034), 2017, v. 8, n. 2, p. 150, doi. 10.1080/19491034.2016.1276145

By:

Barutcu, A. Rasim;
Lian, Jane B.;
Stein, Janet L.;
Stein, Gary S.;
Imbalzano, Anthony N.

Publication type:

Article

Nucleoplasmic Lamin A/C and Polycomb group of proteins: An evolutionarily conserved interplay.

Published in:

Nucleus (1949-1034), 2016, v. 7, n. 2, p. 103, doi. 10.1080/19491034.2016.1157675

By:

Marullo, F.;
Cesarini, E.;
Antonelli, L.;
Gregoretti, F.;
Oliva, G.;
Lanzuolo, C.

Publication type:

Article

Characterization of redox-active cysteine residues of persulfide-responsive transcriptional repressor SqrR.

Published in:

Communicative & Integrative Biology, 2017, v. 10, n. 4, p. 1, doi. 10.1080/19420889.2017.1329786

By:

Shimizu, Takayuki;
Masuda, Shinji

Publication type:

Article

Tethering of CHROMATOR and dCTCF proteins results in decompaction of condensed bands in the Drosophila melanogaster polytene chromosomes but does not affect their transcription and replication timing.

Published in:

PLoS ONE, 2018, v. 13, n. 4, p. 1, doi. 10.1371/journal.pone.0192634

By:

Pokholkova, Galina V.;
Demakov, Sergei A.;
Andreenkov, Oleg V.;
Andreenkova, Natalia G.;
Volkova, Elena I.;
Belyaeva, Elena S.;
Zhimulev, Igor F.

Publication type:

Article