Works matching DE "TRANS-regulatory elements (Genetics)"

Results: 56

Receptor Activator of Nuclear Transcription Factor NF-κB (RANK), Its Ligand RANKL, and Natural Inhibitor of RANKL Osteoprotegerin (OPG) in the Blood Serum of Patients with Primary Bone Tumors.

Published in:

Bulletin of Experimental Biology & Medicine, 2017, v. 163, n. 4, p. 478, doi. 10.1007/s10517-017-3832-9

By:

Kushlinskii, N.;
Gershtein, E.;
Solov'ev, Yu.;
Timofeev, Yu.;
Babkina, I.;
Dolinkin, A.;
Zuev, A.;
Kostyleva, O.

Publication type:

Article

Multiple Mobile mRNA Signals Regulate Tuber Development in Potato.

Published in:

Plants (2223-7747), 2017, v. 6, n. 1, p. 8, doi. 10.3390/plants6010008

By:

Hannapel, David J.;
Banerjee, Anjan K.

Publication type:

Article

A novel lncRNA‐mediated trans‐regulatory mechanism in the development of cleft palate in mouse.

Published in:

Molecular Genetics & Genomic Medicine, 2019, v. 7, n. 2, p. N.PAG, doi. 10.1002/mgg3.522

By:

Shu, Xuan;
Shu, Shenyou;
Cheng, Hongqiu

Publication type:

Article

Allele-specific expression elucidates cis-regulatory logic.

Published in:

PLoS Genetics, 2018, v. 14, n. 11, p. 1, doi. 10.1371/journal.pgen.1007690

By:

Delbare, Sofie Y. N.;
Clark, Andrew G.

Publication type:

Article

Expansion of the classification of FTLD-TDP: distinct pathology associated with rapidly progressive frontotemporal degeneration.

Published in:

Acta Neuropathologica, 2017, v. 134, n. 1, p. 65, doi. 10.1007/s00401-017-1679-9

By:

Lee, Edward;
Porta, Sílvia;
Michael Baer, G.;
Xu, Yan;
Suh, EunRan;
Kwong, Linda;
Elman, Lauren;
Grossman, Murray;
Lee, Virginia;
Irwin, David;
Deerlin, Vivianna;
Trojanowski, John

Publication type:

Article

The FOUR LIPS and MYB88 transcription factor genes are widely expressed in Arabidopsis thaliana during development.

Published in:

American Journal of Botany, 2015, v. 102, n. 9, p. 1521, doi. 10.3732/ajb.1500056

By:

Lei, Qin;
Lee, EunKyoung;
Keerthisinghe, Sandra;
Lai, Lien;
Li, Meng;
Lucas, Jessica R.;
Wen, Xiaohong;
Ren, Xiaolin;
Sack, Fred D.

Publication type:

Article

Gains and Losses of Transcription Factor Binding Sites in Saccharomyces cerevisiae and Saccharomyces paradoxus.

Published in:

Genome Biology & Evolution, 2015, v. 7, n. 8, p. 2245, doi. 10.1093/gbe/evv138

By:

Schaefke, Bernhard;
Tzi-Yuan Wang;
Chuen-Yi Wang;
Wen-Hsiung Li

Publication type:

Article

Negative selection maintains transcription factor binding motifs in human cancer.

Published in:

BMC Genomics, 2016, v. 17, p. 263, doi. 10.1186/s12864-016-2728-9

By:

Vorontsov, Ilya E.;
Khimulya, Grigory;
Lukianova, Elena N.;
Nikolaeva, Daria D.;
Eliseeva, Irina A.;
Kulakovskiy, Ivan V.;
Makeev, Vsevolod J.

Publication type:

Article

"Hit-and-Run" transcription: de novo transcription initiated by a transient bZIP1 "hit" persists after the "run".

Published in:

BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2410-2

By:

Doidy, Joan;
Ying Li;
Neymotin, Benjamin;
Edwards, Molly B.;
Varala, Kranthi;
Gresham, David;
Coruzzi, Gloria M.

Publication type:

Article

Structural and functional annotation of the MADS-box transcription factor family in grapevine.

Published in:

BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2398-7

By:

Grimplet, Jérôme;
Martínez-Zapater, José Miguel;
José Carmona, María

Publication type:

Article

The prognostic utility of the transcription factor SRF in docetaxel-resistant prostate cancer: in-vitro discovery and in-vivo validation.

Published in:

2017

By:

Lundon, D.J.;
Boland, A.;
Prencipe, M.;
Hurley, G.;
O'Neill, A.;
Kay, E.;
Aherne, S. T.;
Doolan, P.;
Madden, S. F.;
Clynes, M.;
Morrissey, C.;
Fitzpatrick, J. M.;
Watson, R. W

Publication type:

journal article

Bioinformatic landscapes for plant transcription factor system research.

Published in:

Planta: An International Journal of Plant Biology, 2016, v. 243, n. 2, p. 297, doi. 10.1007/s00425-015-2453-7

By:

Wang, Yijun;
Lu, Wenjie;
Deng, Dexiang

Publication type:

Article

Mechanisms of TFAM-mediated cardiomyocyte protection.

Published in:

Canadian Journal of Physiology & Pharmacology, 2018, v. 96, n. 2, p. 173, doi. 10.1139/cjpp-2016-0718

By:

Kunkel, George H.;
Chaturvedi, Pankaj;
Thelian, Nicholas;
Nair, Rohit;
Tyagi, Suresh C.

Publication type:

Article

May the Fittest Protein Evolve: Favoring the Plant‐Specific Origin and Expansion of NAC Transcription Factors.

Published in:

BioEssays, 2018, v. 40, n. 8, p. 1, doi. 10.1002/bies.201800018

By:

Mathew, Iny Elizebeth;
Agarwal, Pinky

Publication type:

Article

Infiltration-RNAseq: transcriptome profiling of Agrobacterium-mediated infiltration of transcription factors to discover gene function and expression networks in plants.

Published in:

Plant Methods, 2016, v. 12, p. 1, doi. 10.1186/s13007-016-0141-7

By:

Bond, Donna M.;
Albert, Nick W.;
Lee, Robyn H.;
Gillard, Gareth B.;
Brown, Chris M.;
Hellens, Roger P.;
Macknight, Richard C.

Publication type:

Article

Specificity versus redundancy in the RAP2.4 transcription factor family of Arabidopsis thaliana: transcriptional regulation of genes for chloroplast peroxidases.

Published in:

BMC Plant Biology, 2017, v. 17, p. 1, doi. 10.1186/s12870-017-1092-5

By:

Rudnik, Radoslaw;
Bulcha, Jote Tafese;
Reifschneider, Elena;
Ellersiek, Ulrike;
Baier, Margarete

Publication type:

Article

Expression analysis of MusaNAC68 transcription factor and its functional analysis by overexpression in transgenic banana plants.

Published in:

Plant Cell, Tissue & Organ Culture, 2016, v. 125, n. 1, p. 59, doi. 10.1007/s11240-015-0929-6

By:

Negi, Sanjana;
Tak, Himanshu;
Ganapathi, T.

Publication type:

Article

MpMYBS3 as a crucial transcription factor of cold signaling confers the cold tolerance of banana.

Published in:

Plant Cell, Tissue & Organ Culture, 2016, v. 125, n. 1, p. 93, doi. 10.1007/s11240-015-0932-y

By:

Dou, Tong-xin;
Hu, Chun-hua;
Sun, Xiao-xuan;
Shao, Xiu-hong;
Wu, Jun-hua;
Ding, Li-jie;
Gao, Jie;
He, Wei-di;
Biswas, Manosh-Kumar;
Yang, Qiao-song;
Yi, Gan-jun

Publication type:

Article

Transregional Europe.

Published in:

Journal of Contemporary European Research, 2021, v. 17, n. 2, p. 326, doi. 10.30950/jcer.v17i2.1217

By:

Gänzle, Stefan

Publication type:

Article

The ability of transcription factors to differentially regulate gene expression is a crucial component of the mechanism underlying inversion, a frequently observed genetic interaction pattern.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 5, p. 1, doi. 10.1371/journal.pcbi.1007061

By:

Amini, Saman;
Jacobsen, Annika;
Ivanova, Olga;
Lijnzaad, Philip;
Heringa, Jaap;
Holstege, Frank C. P.;
Feenstra, K. Anton;
Kemmeren, Patrick

Publication type:

Article

The mammalian decidual cell evolved from a cellular stress response.

Published in:

PLoS Biology, 2018, v. 16, n. 8, p. 1, doi. 10.1371/journal.pbio.2005594

By:

Erkenbrack, Eric M.;
Maziarz, Jamie D.;
Griffith, Oliver W.;
Liang, Cong;
Chavan, Arun R.;
Nnamani, Mauris C.;
Wagner, Günter P.

Publication type:

Article

Comprehensive Behavioral Analysis of Activating Transcription Factor 5-Deficient Mice.

Published in:

Frontiers in Behavioral Neuroscience, 2017, p. 1, doi. 10.3389/fnbeh.2017.00125

By:

Mariko Umemura;
Tae Ogura;
Ayako Matsuzaki;
Haruo Nakano;
Keizo Takao;
Tsuyoshi Miyakawa;
Yuji Takahashi

Publication type:

Article

CCAAT enhancer-binding protein α suppresses proliferation, metastasis, and epithelial-mesenchymal transition of ovarian cancer cells via suppressing the Wnt/β-catenin signaling.

Published in:

Neoplasma, 2021, v. 68, n. 3, p. 602, doi. 10.4149/neo_2021_210103N2

By:

Li-Mei ZHANG;
Mo LI;
Chen-Chen TIAN;
Tong-Tong WANG;
Shu-Fang MI

Publication type:

Article

Mitochondrial Transcription Factor A and Mitochondrial Genome as Molecular Targets for Cisplatin-Based Cancer Chemotherapy.

Published in:

International Journal of Molecular Sciences, 2015, v. 16, n. 8, p. 19836, doi. 10.3390/ijms160819836

By:

Kimitoshi Kohno;
Ke-Yong Wang;
Mayu Takahashi;
Tomoko Kurita;
Yoichiro Yoshida;
Masakazu Hirakawa;
Yoshikazu Harada;
Akihiro Kuma;
Hiroto Izumi;
Shinji Matsumoto

Publication type:

Article

Pituitary Adenylate Cyclase Activating Polypeptide (PACAP) Pathway Is Induced by Mechanical Load and Reduces the Activity of Hedgehog Signaling in Chondrogenic Micromass Cell Cultures.

Published in:

International Journal of Molecular Sciences, 2015, v. 16, n. 8, p. 17344, doi. 10.3390/ijms160817344

By:

Juhász, Tamás;
Szentléleky, Eszter;
Somogyi, Csilla Szűcs;
Takács, Roland;
Dobrosi, Nóra;
Engler, Máté;
Tamás, Andrea;
Reglődi, Dóra;
Zákány, Róza

Publication type:

Article

Reconstruction of novel transcription factor regulons through inference of their binding sites.

Published in:

BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0685-y

By:

Elmas, Abdulkadir;
Xiaodong Wang;
Samoilov, Michael S.

Publication type:

Article

Ectopic expression of a hot pepper bZIP-like transcription factor in potato enhances drought tolerance without decreasing tuber yield.

Published in:

Plant Molecular Biology, 2015, v. 89, n. 4-5, p. 421, doi. 10.1007/s11103-015-0378-y

By:

Moon, Seok-Jun;
Han, Se-Youn;
Kim, Dool-Yi;
Yoon, In;
Shin, Dongjin;
Byun, Myung-Ok;
Kwon, Hawk-Bin;
Kim, Beom-Gi

Publication type:

Article

Deciphering the molecular events during arsenic induced transcription signal cascade activation in cellular milieu.

Published in:

BioMetals, 2018, v. 31, n. 1, p. 7, doi. 10.1007/s10534-017-0065-3

By:

Madhyastha, Harishkumar;
Madhyastha, Radha;
Nakajima, Yuichi;
Maruyama, Masugi

Publication type:

Article

Dynamic transcriptome analysis reveals AP2/ERF transcription factors responsible for cold stress in rapeseed ( Brassica napus L.).

Published in:

Molecular Genetics & Genomics, 2016, v. 291, n. 3, p. 1053, doi. 10.1007/s00438-015-1161-0

By:

Du, Chunfang;
Hu, Kaining;
Xian, Shuanshi;
Liu, Chunqing;
Fan, Jianchun;
Tu, Jinxing;
Fu, Tingdong

Publication type:

Article

Construction and analysis of dynamic transcription factor regulatory networks in the progression of glioma.

Published in:

Scientific Reports, 2015, p. 15953, doi. 10.1038/srep15953

By:

Li, Yongsheng;
Shao, Tingting;
Jiang, Chunjie;
Bai, Jing;
Wang, Zishan;
Zhang, Jinwen;
Zhang, Lili;
Zhao, Zheng;
Xu, Juan;
Li, Xia

Publication type:

Article

Transcription factor-associated combinatorial epigenetic pattern reveals higher transcriptional activity of TCF7L2-regulated intragenic enhancers.

Published in:

BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-3764-9

By:

Qi Liu;
Bonneville, Russell;
Tianbao Li;
Jin, Victor X.

Publication type:

Article

The Inflammatory Transcription Factors NFκB, STAT1 and STAT3 Drive Age-Associated Transcriptional Changes in the Human Kidney.

Published in:

PLoS Genetics, 2015, v. 11, n. 12, p. 1, doi. 10.1371/journal.pgen.1005734

By:

O’Brown, Zach K.;
Van Nostrand, Eric L.;
Higgins, John P.;
Kim, Stuart K.

Publication type:

Article

Sexually dimorphic gene expression patterns during gonadal differentiation in olive flounder, Paralichthys olivaceus.

Published in:

Animal Biology, 2015, v. 65, n. 3/4, p. 193, doi. 10.1163/15707563-00002470

By:

Aiyun Wen;
Feng You;
Peng Sun;
Jun Li;
Dongdong Xu;
Zhihao Wu;
Deyou Ma;
Yuxia Zou;
Xungang Tan;
Zhaofei Fan;
Peijun Zhang

Publication type:

Article

Generation and characterization of expressed sequence tags in young roots of tea ( Camellia assamica).

Published in:

Biologia Plantarum, 2016, v. 60, n. 1, p. 48, doi. 10.1007/s10535-015-0565-3

By:

Das, A.;
Mukhopadhyay, M.;
Mondal, T.

Publication type:

Article

Rhodopsin targeted transcriptional silencing by DNA-binding.

Published in:

eLife, 2016, p. 1, doi. 10.7554/eLife.12242

By:

Botta, Salvatore;
Marrocco, Elena;
de Prisco, Nicola;
Curion, Fabiola;
Renda, Mario;
Sofia, Martina;
Lupo, Mariangela;
Carissimo, Annamaria;
Bacci, Maria Laura;
Gesualdo, Carlo;
Rossi, Settimio;
Simonelli, Francesca;
Surace, Enrico Maria

Publication type:

Article

Signal transducer and activator of transcription 5 (STAT5) paralog dose governs T cell effector and regulatory functions.

Published in:

eLife, 2016, p. 1, doi. 10.7554/eLife.08384

By:

Villarino, Alejandro;
Laurence, Arian;
Robinson, Gertraud W.;
Bonelli, Michael;
Dema, Barbara;
Afzali, Behdad;
Han-Yu Shih;
Hong-Wei Sun;
Brooks, Stephen R.;
Hennighausen, Lothar;
Yuka Kanno;
O'Shea, John J.

Publication type:

Article

One for all.

Published in:

eLife, 2016, p. 1, doi. 10.7554/eLife.14150

By:

ODOM, DUNCAN T.

Publication type:

Article

A continuum model of transcriptional bursting.

Published in:

eLife, 2016, p. 1, doi. 10.7554/eLife.13051

By:

Corrigan, Adam M.;
Tunnacliffe, Edward;
Cannon, Danielle;
Chubb, Jonathan R.

Publication type:

Article

An experimentally validated network of nine haematopoietic transcription factors reveals mechanisms of cell state stability.

Published in:

eLife, 2016, p. 1, doi. 10.7554/eLife.11469

By:

Schütte, Judith;
Huange Wang;
Antoniou, Stella;
Jarratt, Andrew;
Wilson, Nicola K.;
Riepsaame, Joey;
Calero-Nieto, Fernando J.;
Moignard, Victoria;
Basilico, Silvia;
Kinston, Sarah J.;
Hannah, Rebecca L.;
Mun Chiang Chan;
Nürnberg, Sylvia T.;
Ouwehand, Willem H.;
Bonzanni, Nicola;
de Bruijn, Marella F. T. R.;
Göttgens, Berthold

Publication type:

Article

Fast turnover of genome transcription across evolutionary time exposes entire non-coding DNA to de novo gene emergence.

Published in:

eLife, 2016, p. 1, doi. 10.7554/eLife.09977

By:

Neme, Rafik;
Tautz, Diethard

Publication type:

Article

Spatially coordinated dynamic gene transcription in living pituitary tissue.

Published in:

eLife, 2016, p. 1, doi. 10.7554/eLife.08494

By:

Featherstone, Karen;
Hey, Kirsty;
Momiji, Hiroshi;
McNamara, Anne V.;
Patist, Amanda L.;
Woodburn, Joanna;
Spiller, David G.;
Christian, Helen C.;
McNeilly, Alan S.;
Mullins, John J.;
Finkenstädt, Bärbel F.;
Rand, David A.;
White, Michael R. H.;
Davis, Julian R. E.

Publication type:

Article

A new view of transcriptome complexity and regulation through the lens of local splicing variations.

Published in:

eLife, 2016, p. 1, doi. 10.7554/eLife.11752

By:

Vaquero-Garcia, Jorge;
Barrera, Alejandro;
Gazzara, Matthew R.;
González-Vallinas, Juan;
Lahens, Nicholas F.;
Hogenesch, John B.;
Lynch, Kristen W.;
Barash, Yoseph

Publication type:

Article

Position-dependent plasticity of distinct progenitor types in the primitive streak.

Published in:

eLife, 2016, p. 1, doi. 10.7554/eLife.10042

By:

Wymeersch, Filip J.;
Yali Huang;
Blin, Guillaume;
Cambray, Noemí;
Wilkie, Ron;
Wong, Frederick C. K.;
Wilson, Valerie

Publication type:

Article

Small interfering RNAs from bidirectional transcripts of Gh MML3_A12 regulate cotton fiber development.

Published in:

New Phytologist, 2016, v. 210, n. 4, p. 1298, doi. 10.1111/nph.13860

By:

Wan, Qun;
Guan, Xueying;
Yang, Nannan;
Wu, Huaitong;
Pan, Mengqiao;
Liu, Bingliang;
Fang, Lei;
Yang, Shouping;
Hu, Yan;
Ye, Wenxue;
Zhang, Hua;
Ma, Peiyong;
Chen, Jiedan;
Wang, Qiong;
Mei, Gaofu;
Cai, Caiping;
Yang, Donglei;
Wang, Jiawei;
Guo, Wangzhen;
Zhang, Wenhua

Publication type:

Article

Expression of GATA and POU transcription factors during the development of the planktotrophic trochophore of the polychaete serpulid Hydroides elegans.

Published in:

Evolution & Development, 2016, v. 18, n. 4, p. 254, doi. 10.1111/ede.12196

By:

Wong, Kimberly Suk‐Ying;
Arenas‐Mena, Cesar

Publication type:

Article

Combining manipulation of transcription factors and overexpression of the target genes to enhance lignocellulolytic enzyme production in Penicillium oxalicum.

Published in:

Biotechnology for Biofuels, 2017, v. 10, p. 1, doi. 10.1186/s13068-017-0783-3

By:

Liwei Gao;
Zhonghai Li;
Chengqiang Xia;
Yinbo Qu;
Meng Liu;
Piao Yang;
Lele Yu;
Xin Song

Publication type:

Article

Transcription of the mating-type-regulated lncRNA IRT1 is governed by TORC1 and PKA.

Published in:

Current Genetics, 2017, v. 63, n. 2, p. 325, doi. 10.1007/s00294-016-0639-6

By:

Moretto, Fabien;
Werven, Folkert

Publication type:

Article

Hopx and the Cardiomyocyte Parentage.

Published in:

Molecular Therapy, 2015, v. 23, n. 9, p. 1420, doi. 10.1038/mt.2015.140

By:

Schneider, Michael D;
Baker, Andrew H;
Riley, Paul

Publication type:

Article

Regulation of transcription factors by sumoylation.

Published in:

Transcription (2154-1264), 2017, v. 8, n. 4, p. 220, doi. 10.1080/21541264.2017.1311829

By:

Rosonina, Emanuel;
Akhter, Akhi;
Dou, Yimo;
Babu, John;
Sri Theivakadadcham, Veroni S.

Publication type:

Article

Super elongation complex promotes early HIV transcription and its function is modulated by P-TEFb.

Published in:

Transcription (2154-1264), 2017, v. 8, n. 3, p. 133, doi. 10.1080/21541264.2017.1295831

By:

Kuzmina, Alona;
Krasnopolsky, Simona;
Taube, Ran

Publication type:

Article