Works matching DE "STRUCTURAL genomics"

Results: 109

Identification of the HcgB Enzyme in [Fe]-Hydrogenase-Cofactor Biosynthesis.

Published in:

Angewandte Chemie, 2013, v. 125, n. 48, p. 12787, doi. 10.1002/ange.201306745

By:

Fujishiro, Takashi;
Tamura, Haruka;
Schick, Michael;
Kahnt, Jörg;
Xie, Xiulan;
Ermler, Ulrich;
Shima, Seigo

Publication type:

Article

Tailored Hydrogel Membranes for Efficient Protein Crystallization.

Published in:

Advanced Functional Materials, 2014, v. 24, n. 11, p. 1582, doi. 10.1002/adfm.201302240

By:

Profio, Gianluca Di;
Polino, Mariella;
Nicoletta, Fiore P.;
Belviso, Benny D.;
Caliandro, Rocco;
Fontananova, Enrica;
Filpo, Giovanni De;
Curcio, Efrem;
Drioli, Enrico

Publication type:

Article

ClC Channels and Transporters: Structure, Physiological Functions, and Implications in Human Chloride Channelopathies.

Published in:

Frontiers in Pharmacology, 2017, v. 8, p. 1, doi. 10.3389/fphar.2017.00151

By:

Poroca, Diogo R.;
Pelis, Ryan M.;
Chappe, Valérie M.

Publication type:

Article

Quantification of the impact of PSI:Biology according to the annotations of the determined structures.

Published in:

BMC Structural Biology, 2013, v. 13, p. 1, doi. 10.1186/1472-6807-13-24

By:

DePietro, Paul J.;
Julfayev, Elchin S.;
McLaughlin, William A.

Publication type:

Article

Repeat elements organise 3D genome structure and mediate transcription in the filamentous fungus Epichloë festucae.

Published in:

PLoS Genetics, 2018, v. 14, n. 10, p. 1, doi. 10.1371/journal.pgen.1007467

By:

Winter, David J.;
Ganley, Austen R. D.;
Young, Carolyn A.;
Liachko, Ivan;
Schardl, Christopher L.;
Dupont, Pierre-Yves;
Berry, Daniel;
Ram, Arvina;
Scott, Barry;
Cox, Murray P.

Publication type:

Article

A Consensus Method for Ancestral Recombination Graphs.

Published in:

Journal of Molecular Evolution, 2017, v. 84, n. 2/3, p. 129, doi. 10.1007/s00239-017-9786-8

By:

Kuhner, Mary;
Yamato, Jon

Publication type:

Article

Advances in computational approaches for prioritizing driver mutations and significantly mutated genes in cancer genomes.

Published in:

Briefings in Bioinformatics, 2016, v. 17, n. 4, p. 642, doi. 10.1093/bib/bbv068

By:

Feixiong Cheng;
Junfei Zhao;
Zhongming Zhao

Publication type:

Article

Phylogenomics of the killer whale indicates ecotype divergence in sympatry.

Published in:

Heredity, 2015, v. 114, n. 1, p. 48, doi. 10.1038/hdy.2014.67

By:

Moura, A E;
Kenny, J G;
Chaudhuri, R R;
Hughes, M A;
Reisinger, R R;
de Bruyn, P J N;
Dahlheim, M E;
Hall, N;
Hoelzel, A R

Publication type:

Article

Role of transcription regulatory sequence in regulation of gene expression and replication of porcine reproductive and respiratory syndrome virus.

Published in:

Veterinary Research, 2017, v. 48, p. 1, doi. 10.1186/s13567-017-0445-2

By:

Chengbao Wang;
Han Meng;
Yujin Gao;
Hui Gao;
Kangkang Guo;
Almazan, Fernando;
Sola, Isabel;
Enjuanes, Luis;
Yanming Zhang;
Abrahamyan, Levon

Publication type:

Article

Structural genomic alterations in primary mediastinal large B-cell lymphoma.

Published in:

Leukemia & Lymphoma, 2015, v. 56, n. 8, p. 2239, doi. 10.3109/10428194.2014.985673

By:

Twa, David D. W.;
Steidl, Christian

Publication type:

Article

Rapid Evolutionary Dynamics of Structural Disorder as a Potential Driving Force for Biological Divergence in Flaviviruses.

Published in:

Genome Biology & Evolution, 2013, v. 5, n. 3, p. 504, doi. 10.1093/gbe/evt026

By:

Ortiz, Juan F.;
MacDonald, Madolyn L.;
Masterson, Patrick;
Uversky, Vladimir N.;
Siltberg-Liberles, Jessica

Publication type:

Article

Codons Support the Maintenance of Intrinsic DNA Polymer Flexibility over Evolutionary Timescales.

Published in:

Genome Biology & Evolution, 2012, v. 4, n. 9, p. 954, doi. 10.1093/gbe/evs073

By:

Babbitt, G. A.;
Schulze, K. V.

Publication type:

Article

Diurnal regulation of the floral scent emission by light and circadian rhythm in the Phalaenopsis orchids.

Published in:

Botanical Studies, 2017, v. 58, n. 1, p. 1, doi. 10.1186/s40529-017-0204-8

By:

Chuang, Yu-Chen;
Lee, Ming-Chi;
Chang, Ya-Lan;
Chen, Wen-Huei;
Chen, Hong-Hwa

Publication type:

Article

ProCARs: Progressive Reconstruction of Ancestral Gene Orders.

Published in:

BMC Genomics, 2015, v. 16, p. 1, doi. 10.1186/1471-2164-16-S5-S6

By:

Perrin, Amandine;
Varré, Jean-Stéphane;
Blanquart, Samuel;
Ouangraoua, Aïda

Publication type:

Article

GASS: genome structural annotation for Eukaryotes based on species similarity.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1353-3

By:

Ying Wang;
Lina Chen;
Nianfeng Song;
Xiaoye Lei

Publication type:

Article

Viral Quasispecies Assembly via Maximal Clique Enumeration.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 3, p. 1, doi. 10.1371/journal.pcbi.1003515

By:

Töpfer, Armin;
Marschall, Tobias;
Bull, Rowena A.;
Luciani, Fabio;
Schönhuth, Alexander;
Beerenwinkel, Niko

Publication type:

Article

Consideration of mobile DNA: new forms of artificial genetic regulatory networks.

Published in:

Natural Computing, 2013, v. 12, n. 4, p. 443, doi. 10.1007/s11047-013-9369-6

By:

Bull, Larry

Publication type:

Article

A gene cluster for the biosynthesis of moenomycin family antibiotics in the genome of teicoplanin producer Actinoplanes teichomyceticus.

Published in:

Applied Microbiology & Biotechnology, 2016, v. 100, n. 17, p. 7629, doi. 10.1007/s00253-016-7685-3

By:

Horbal, Liliya;
Ostash, Bohdan;
Luzhetskyy, Andriy;
Walker, Suzanne;
Kalinowski, Jorn;
Fedorenko, Victor

Publication type:

Article

Codon usage of HIV regulatory genes is not determined by nucleotide composition.

Published in:

Archives of Virology, 2018, v. 163, n. 2, p. 337, doi. 10.1007/s00705-017-3597-5

By:

Phakaratsakul, Supinya;
Sirihongthong, Thanyaporn;
Boonarkart, Chompunuch;
Suptawiwat, Ornpreya;
Auewarakul, Prasert

Publication type:

Article

Mating structures for genomic selection breeding programs in aquaculture.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0224-y

By:

Sonesson, Anna K.;
Ødegård, Jørgen

Publication type:

Article

Structure-guided discovery of the metabolite carboxy-SAM that modulates tRNA function.

Published in:

Nature, 2013, v. 498, n. 7452, p. 123, doi. 10.1038/nature12180

By:

Kim, Jungwook;
Xiao, Hui;
Bonanno, Jeffrey B.;
Kalyanaraman, Chakrapani;
Brown, Shoshana;
Tang, Xiangying;
Al-Obaidi, Nawar F.;
Patskovsky, Yury;
Babbitt, Patricia C.;
Jacobson, Matthew P.;
Lee, Young-Sam;
Almo, Steven C.

Publication type:

Article

Structural genomics: Open collaboration is key to new drugs.

Published in:

Nature, 2012, v. 491, n. 7422, p. 40, doi. 10.1038/491040d

By:

Gruetter, Markus

Publication type:

Article

Development & evaluation of biotinylated DNA probe for clinical diagnosis of chikungunya infection in patients' acute phase serum & CSF samples.

Published in:

Indian Journal of Medical Research, 2013, v. 138, n. 1, p. 117

By:

Kumar, Jyoti S.;
Parida, Manmohan;
Lakshmana Rao, P. V.

Publication type:

Article

Common Stress Transcriptome Analysis Reveals Functional and Genomic Architecture Differences Between Early and Delayed Response Genes.

Published in:

Plant & Cell Physiology, 2017, v. 58, n. 3, p. 546, doi. 10.1093/pcp/pcx002

By:

Chung-Wen Lin;
Li-Yao Huang;
Chao-Li Huang;
Yong-Chuan Wang;
Pei-Hsuan Lai;
Hao-Ven Wang;
Wen-Chi Chang;
Tzen-Yuh Chiang;
Hao-Jen Huang

Publication type:

Article

Effects of land use on population presence and genetic structure of an amphibian in an agricultural landscape.

Published in:

Landscape Ecology, 2017, v. 32, n. 1, p. 147, doi. 10.1007/s10980-016-0438-y

By:

Youngquist, Melissa;
Inoue, Kentaro;
Boone, Michelle;
Berg, David

Publication type:

Article

Misspecification in Mixed-Model-Based Association Analysis.

Published in:

Genetics, 2016, v. 202, n. 1, p. 363, doi. 10.1534/genetics.115.177212

By:

Kruijer, Willem

Publication type:

Article

Genome-Wide Structural Variation Detection by Genome Mapping on Nanochannel Arrays.

Published in:

Genetics, 2016, v. 202, n. 1, p. 351, doi. 10.1534/genetics.115.183483

By:

Mak, Angel C. Y.;
Lai, Yvonne Y. Y.;
Lam, Ernest T.;
Tsz-Piu Kwok;
Leung, Alden K. Y.;
Poon, Annie;
Mostovoy, Yulia;
Hastie, Alex R.;
Stedman, William;
Anantharaman, Thomas;
Andrews, Warren;
Xiang Zhou;
Pang, Andy W. C.;
Heng Dai;
Chu, Catherine;
Chin Lin;
Wu, Jacob J. K.;
L. Li, Catherine M.;
Jing-Woei Li;
Yim, Aldrin K. Y.

Publication type:

Article

Adaptive potential of genomic structural variation in human and mammalian evolution.

Published in:

Briefings in Functional Genomics, 2015, v. 14, n. 5, p. 258, doi. 10.1093/bfgp/elv019

By:

Radke, David W.;
Charles Lee

Publication type:

Article

A decade of structural variants: description, history and methods to detect structural variation.

Published in:

Briefings in Functional Genomics, 2015, v. 14, n. 5, p. 305, doi. 10.1093/bfgp/elv014

By:

Escaramís, Geòrgia;
Docampo, Elisa;
Rabionet, Raquel

Publication type:

Article

Epistasis Analysis Goes Genome-Wide.

Published in:

PLoS Genetics, 2017, v. 13, n. 2, p. 1, doi. 10.1371/journal.pgen.1006558

By:

Zhang, Jianzhi

Publication type:

Article

Structural imprints in vivo decode RNA regulatory mechanisms.

Published in:

Nature, 2015, v. 519, n. 7544, p. 486, doi. 10.1038/nature14263

By:

Spitale, Robert C.;
Flynn, Ryan A.;
Zhang, Qiangfeng Cliff;
Crisalli, Pete;
Lee, Byron;
Jung, Jong-Wha;
Kuchelmeister, Hannes Y.;
Batista, Pedro J.;
Torre, Eduardo A.;
Kool, Eric T.;
Chang, Howard Y.

Publication type:

Article

A method ahead of its time: Molecular replacement: Milestone 13.

Published in:

Nature, 2014, v. 511, p. 13, doi. 10.1038/nature13361

By:

Doerr, Allison

Publication type:

Article

Preclinical target validation using patient-derived cells.

Published in:

Nature Reviews Drug Discovery, 2015, v. 14, n. 3, p. 149, doi. 10.1038/nrd4565

By:

Edwards, Aled M.;
Arrowsmith, Cheryl H.;
Bountra, Chas;
Bunnage, Mark E.;
Feldmann, Marc;
Knight, Julian C.;
Patel, Dhavalkumar D.;
Prinos, Panagiotis;
Taylor, Michael D.;
Sundström, Michael;
Barker, Phil;
Barsyte, Dalia;
Bengtson, Mario H.;
Bell, Cindy;
Bowness, Paul;
Boycott, Kym M.;
Buser-Doepner, Carolyn;
Carpenter, Christopher L.;
Carr, Andrew J.;
Clark, Kirk

Publication type:

Article

Evaluation of smeared properties approaches and mechanics of structure genome for analyzing composite beams.

Published in:

Mechanics of Advanced Materials & Structures, 2018, v. 25, n. 14, p. 1171, doi. 10.1080/15376494.2017.1330977

By:

Liu, Ning;
Yu, Wenbin

Publication type:

Article

Basic concepts of medical genetics, formal genetics, Part 1.

Published in:

Egyptian Journal of Medical Human Genetics, 2014, v. 15, n. 1, p. 99, doi. 10.1016/j.ejmhg.2013.10.001

By:

Salem, Mohammad Saad Zaghloul

Publication type:

Article

Educational Corner.

Published in:

Egyptian Journal of Medical Human Genetics, 2012, v. 13, n. 1, p. 119, doi. 10.1016/j.ejmhg.2011.11.002

By:

Zaghloul Salem, Mohammad Saad

Publication type:

Article

Research Ethics 2.0: New Perspectives on Norms, Values, and Integrity in Genomic Research in Times of Even Scarcer Resources.

Published in:

Public Health Genomics, 2017, v. 20, n. 1, p. 27, doi. 10.1159/000462960

By:

Brall, Caroline;
Maeckelberghe, Els;
Porz, Rouven;
Makhoul, Jihad;
Schröder-Bäck, Peter

Publication type:

Article

Structural features and thermal stability of shrimp 14-3-3ε.

Published in:

Songklanakarin Journal of Science & Technology, 2017, v. 39, n. 4, p. 531

By:

Chutintorn Chauywong;
Sasithorn Boonprakong;
Amornrat Phongdara;
Warapond Wanna

Publication type:

Article

Genome-wide marker-trait association analysis in a core set of Dolichos bean germplasm.

Published in:

Plant Genetic Resources: Characterisation & Utilisation, 2019, v. 17, n. 1, p. 1, doi. 10.1017/S1479262118000163

By:

Vaijayanthi, P. V.;
Ramesh, S.;
Gowda, M. B.;
Rao, A. M.;
Keerthi, C. M.

Publication type:

Article

ASSIST: a fast versatile local structural comparison tool.

Published in:

Bioinformatics, 2014, v. 30, n. 7, p. 1022, doi. 10.1093/bioinformatics/btt664

By:

Caprari, Silvia;
Toti, Daniele;
Viet Hung, Le;
Di Stefano, Maurizio;
Polticelli, Fabio

Publication type:

Article

PAVIS: a tool for Peak Annotation and Visualization.

Published in:

Bioinformatics, 2013, v. 29, n. 23, p. 3097, doi. 10.1093/bioinformatics/btt520

By:

Huang, Weichun;
Loganantharaj, Rasiah;
Schroeder, Bryce;
Fargo, David;
Li, Leping

Publication type:

Article

Pipit: visualizing functional impacts of structural variations.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2206, doi. 10.1093/bioinformatics/btt367

By:

Sakai, Ryo;
Moisse, Matthieu;
Reumers, Joke;
Aerts, Jan

Publication type:

Article

Beyond the thale: comparative genomics and genetics of Arabidopsis relatives.

Published in:

Nature Reviews Genetics, 2015, v. 16, n. 5, p. 285, doi. 10.1038/nrg3883

By:

Koenig, Daniel;
Weigel, Detlef

Publication type:

Article

The generality of scientific models: a measure theoretic approach.

Published in:

Synthese, 2015, v. 192, n. 1, p. 269, doi. 10.1007/s11229-014-0567-2

By:

Lewis, Cory;
Belanger, Christopher

Publication type:

Article

A homologous mapping method for three-dimensional reconstruction of protein networks reveals disease-associated mutations.

Published in:

BMC Systems Biology, 2018, v. 12, n. Suppl 2, p. 1, doi. 10.1186/s12918-018-0537-2

By:

Huang, Sing-Han;
Lo, Yu-Shu;
Luo, Yong-Chun;
Tseng, Yu-Yao;
Yang, Jinn-Moon

Publication type:

Article

Protein function annotation with Structurally Aligned Local Sites of Activity (SALSAs).

Published in:

BMC Bioinformatics, 2013, v. 14, n. S3, p. 1, doi. 10.1186/1471-2105-14-S3-S13

By:

Wang, Zhouxi;
Yin, Pengcheng;
Lee, Joslynn S.;
Parasuram, Ramya;
Somarowthu, Srinivas;
Ondrechen, Mary Jo

Publication type:

Article

Function prediction from networks of local evolutionary similarity in protein structure.

Published in:

BMC Bioinformatics, 2013, v. 14, n. S3, p. 1, doi. 10.1186/1471-2105-14-S3-S6

By:

Erdin, Serkan;
Venner, Eric;
Lisewski, Andreas Martin;
Lichtarge, Olivier

Publication type:

Article

Computing the protein binding sites.

Published in:

BMC Bioinformatics, 2012, v. 13, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-13-S10-S2

By:

Fei Guo;
Lusheng Wang

Publication type:

Article

Molecular Characterization of Ethylene-Regulated Anthocyanin Biosynthesis in Plums During Fruit Ripening.

Published in:

Plant Molecular Biology Reporter, 2016, v. 34, n. 4, p. 777, doi. 10.1007/s11105-015-0963-x

By:

Cheng, Yudou;
Liu, Liqin;
Yuan, Can;
Guan, Junfeng

Publication type:

Article

SATurn: a modular bioinformatics framework for the design of robust maintainable web-based and standalone applications.

Published in:

Bioinformatics, 2019, v. 35, n. 2, p. 349, doi. 10.1093/bioinformatics/bty549

By:

Damerell, David R;
Strain-Damerell, Claire;
Garsot, Sefa;
Joyce, Stephen P;
Barrett, Paul;
Marsden, Brian D

Publication type:

Article