Works matching DE "STRUCTURAL bioinformatics"
Results: 431
PyPropel: a Python-based tool for efficiently processing and characterising protein data.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06079-3
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- Article
Crystal Structure Of [Au(Dien)Cl][ReTe(Cn)]Sd5HO.
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- Journal of Structural Chemistry, 2010, v. 51, n. 4, p. 714, doi. 10.1007/s10947-010-0105-0
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- Article
Crystal structure of pyrimidinophane containing two uracil moieties with a cis-orientation of the carbonyl groups.
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- Journal of Structural Chemistry, 2008, v. 49, n. 1, p. 185, doi. 10.1007/s10947-008-0027-2
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- Article
GISA: using Gauss Integrals to identify rare conformations in protein structures.
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- PeerJ, 2020, p. 1, doi. 10.7717/peerj.9159
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- Article
Novel druggable space in human KRAS G13D discovered using structural bioinformatics and a P-loop targeting monoclonal antibody.
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- Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-70217-9
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- Article
Bioinformatics approach for structure modeling, vaccine design, and molecular docking of Brucella candidate proteins BvrR, OMP25, and OMP31.
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- Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-61991-7
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- Article
deepBBQ: A Deep Learning Approach to the Protein Backbone Reconstruction.
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- Biomolecules (2218-273X), 2024, v. 14, n. 11, p. 1448, doi. 10.3390/biom14111448
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- Article
Editorial: Special Issue "Protein Modeling and Simulation: Selected Articles from the Computational Structural Bioinformatics Workshop 2021".
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- Biomolecules (2218-273X), 2023, v. 13, n. 3, p. 408, doi. 10.3390/biom13030408
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- Article
Boosting the Full Potential of PyMOL with Structural Biology Plugins.
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- Biomolecules (2218-273X), 2022, v. 12, n. 12, p. 1764, doi. 10.3390/biom12121764
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- Article
The Difference in Structural States between Canonical Proteins and Their Isoforms Established by Proteome-Wide Bioinformatics Analysis.
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- Biomolecules (2218-273X), 2022, v. 12, n. 11, p. 1610, doi. 10.3390/biom12111610
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- Article
Structural Achievability of an NH–π Interaction between Gln and Phe in a Crystal Structure of a Collagen-like Peptide.
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- Biomolecules (2218-273X), 2022, v. 12, n. 10, p. N.PAG, doi. 10.3390/biom12101433
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- Article
Protein Data Bank: A Comprehensive Review of 3D Structure Holdings and Worldwide Utilization by Researchers, Educators, and Students.
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- Biomolecules (2218-273X), 2022, v. 12, n. 10, p. N.PAG, doi. 10.3390/biom12101425
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- Publication type:
- Article
Zinc Modulation of Neuronal Calcium Sensor Proteins: Three Modes of Interaction with Different Structural Outcomes.
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- Biomolecules (2218-273X), 2022, v. 12, n. 7, p. N.PAG, doi. 10.3390/biom12070956
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- Article
Machine Learning Approaches for Quality Assessment of Protein Structures.
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- Biomolecules (2218-273X), 2020, v. 10, n. 4, p. 626, doi. 10.3390/biom10040626
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- Article
Antifragility and Tinkering in Biology (and in Business) Flexibility Provides an Efficient Epigenetic Way to Manage Risk.
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- Genes, 2011, v. 2, n. 4, p. 998, doi. 10.3390/genes2040998
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- Article
Annotation of Protein Domains Reveals Remarkable Conservation in the Functional Make up of Proteomes Across Superkingdoms.
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- Genes, 2011, v. 2, n. 4, p. 869, doi. 10.3390/genes2040869
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- Article
The Evolution of Protein Structures and Structural Ensembles Under Functional Constraint.
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- Genes, 2011, v. 2, n. 4, p. 748, doi. 10.3390/genes2040748
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- Article
Fen Bilgisi Öğretmen ve Öğretmen Adaylarının Biyoinformatik Farkındalıkları.
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- Journal of Kirsehir Education Faculty, 2020, v. 21, n. 1, p. 595, doi. 10.29299/kefad.2020.21.01.016
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- Article
Influenza B virus has global ordered RNA structure in (+) and (-) strands but relatively less stable predicted RNA folding free energy than allowed by the encoded protein sequence.
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- BMC Research Notes, 2013, v. 6, n. 1, p. 1, doi. 10.1186/1756-0500-6-330
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- Article
Two novel mutations in MSX1 causing oligodontia.
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- PLoS ONE, 2020, v. 15, n. 1, p. 1, doi. 10.1371/journal.pone.0227287
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- Article
Structure-based maximal affinity model predicts small-molecule druggability.
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- Nature Biotechnology, 2007, v. 25, n. 1, p. 71, doi. 10.1038/nbt1273
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- Article
Origin of structural difference in metabolic networks with respect to temperature.
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- BMC Systems Biology, 2008, v. 2, p. 1, doi. 10.1186/1752-0509-2-82
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- Article
THE PROTEIN DATA BANK IN THE CLASSROOM AND BEYOND (998.1-998.5).
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- 2005
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- Abstract
Bioinformatics: Predicting PPIs.
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- Nature Methods, 2012, v. 9, n. 12, p. 1139, doi. 10.1038/nmeth.2272
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- Article
The author file: Gustavo Stolovitzky.
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- Nature Methods, 2012, v. 9, n. 8, p. 767, doi. 10.1038/nmeth.2113
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- Article
Revealing the hidden structure of our genome.
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- Nature Methods, 2006, v. 3, n. 6, p. 427, doi. 10.1038/nmeth0606-427
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- Article
Problem solved?
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- Nature Methods, 2005, v. 2, n. 3, p. 162, doi. 10.1038/nmeth0305-162b
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- Article
Quantifying conformational changes in GPCRs: glimpse of a common functional mechanism.
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- BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0567-3
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- Article
A method of searching for related literature on protein structure analysis by considering a user's intention.
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- BMC Bioinformatics, 2015, p. 1, doi. 10.1186/1471-2105-16-S7-S4
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- Article
PCalign: a method to quantify physicochemical similarity of protein-protein interfaces.
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- BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0471-x
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- Article
Interfacing medicinal chemistry with structural bioinformatics: implications for T box riboswitch RNA drug discovery.
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- BMC Bioinformatics, 2012, v. 13, n. Suppl 2, p. 1, doi. 10.1186/1471-2105-13-S2-S5
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- Publication type:
- Article
Fast and accurate protein substructure searchingwith simulated annealing and GPUs.
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- BMC Bioinformatics, 2010, v. 11, p. 446, doi. 10.1186/1471-2105-11-446
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- Article
CMASA: an accurate algorithm for detecting localprotein structural similarity and its application toenzyme catalytic site annotation.
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- BMC Bioinformatics, 2010, v. 11, p. 439, doi. 10.1186/1471-2105-11-439
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- Article
TOPSAN: a collaborative annotation environment for structural genomics.
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- BMC Bioinformatics, 2010, v. 11, p. 426, doi. 10.1186/1471-2105-11-426
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- Article
Predicting β-turns and their types usingpredicted backbone dihedral angles andsecondary structures.
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- BMC Bioinformatics, 2010, v. 11, p. 407, doi. 10.1186/1471-2105-11-407
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- Article
Automatic structure classification of smallproteins using random forest.
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- BMC Bioinformatics, 2010, v. 11, p. 364, doi. 10.1186/1471-2105-11-364
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- Article
A structural approach for finding functional modules from large biological networks.
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- BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-S9-S19
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- Article
Modularization of biochemical networks based on classification of Petri net t-invariants.
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- BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-90
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- Article
TOPS++FATCAT: Fast flexible structural alignment using constraints derived from TOPS+ Strings Model.
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- BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-358
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- Article
Tools for integrated sequence-structure analysis with UCSF Chimera.
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- BMC Bioinformatics, 2006, v. 7, p. 339, doi. 10.1186/1471-2105-7-339
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- Article
Implications for domain fusion protein-protein interactions based on structural information.
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- BMC Bioinformatics, 2004, v. 5, p. 161, doi. 10.1186/1471-2105-5-161
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- Publication type:
- Article
STING Millennium Suite: integrated software for extensive analyses of 3d structures of proteins and their complexes.
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- BMC Bioinformatics, 2004, v. 5, p. 107, doi. 10.1186/1471-2105-5-107
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- Publication type:
- Article
Structural characterization of genomes by large scale sequence-structure threading: application of reliability analysis in structural genomics.
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- BMC Bioinformatics, 2004, v. 5, p. 101, doi. 10.1186/1471-2105-5-101
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- Article
Integrated web service for improving alignment quality based on segments comparison.
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- BMC Bioinformatics, 2004, v. 5, p. 98, doi. 10.1186/1471-2105-5-98
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- Publication type:
- Article
On the Regularities of the Polar Profiles of Proteins Related to Ebola Virus Infection and their Functional Domains.
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- Cell Biochemistry & Biophysics, 2018, v. 76, n. 3, p. 411, doi. 10.1007/s12013-018-0839-4
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- Article
News Blast.
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- Bio-IT World, 2005, v. 4, n. 3, p. 40
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- Article
Molecular characterization, expression and in-silico analysis of fibrinogen-related protein 1 (frep1) in malaria vector Anopheles stephensi.
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- Molecular Biology Reports, 2024, v. 51, n. 1, p. 1, doi. 10.1007/s11033-024-09891-x
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- Article
Definition of a New Information-Based Per-Residue Quality Parameter.
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- Journal of Biomolecular NMR, 2005, v. 33, n. 2, p. 123, doi. 10.1007/s10858-005-2826-5
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- Article
Reweighted atomic densities to represent ensembles of NMR structures<sup>*</sup>.
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- Journal of Biomolecular NMR, 2002, v. 23, n. 3, p. 221, doi. 10.1023/A:1019875223132
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- Publication type:
- Article
Advantages of polymer-supported multivalent organocatalysts for the Baylis-Hillman reaction over their soluble analogues.
- Published in:
- Pure & Applied Chemistry, 2014, v. 86, n. 11, p. 1805, doi. 10.1515/pac-2014-0721
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- Article