Works matching DE "SIGNAL recognition particle receptor"

Results: 378

Evidence from a Comprehensive Bioinformatics Analysis Point to Possible Therapeutic Targets for Vitiligo.

Published in:

Clinical, Cosmetic & Investigational Dermatology, 2025, v. 18, p. 1281, doi. 10.2147/CCID.S523231

By:

Wang, Yingwei;
Yao, Tao;
Lin, Yunlu;
Wu, Jianming

Publication type:

Article

Elucidating the wedelolactone biosynthesis pathway from Eclipta prostrata (L.) L.: a comprehensive analysis integrating de novo comparative transcriptomics, metabolomics, and molecular docking of targeted proteins.

Published in:

Protoplasma, 2025, v. 262, n. 4, p. 815, doi. 10.1007/s00709-025-02030-8

By:

Bano, Anjum;
Kumari, Archana;
Pandey, Akansha;
Kumar, Akhilesh;
Madan, Mallika;
Mohanta, Anshu;
Minj, Emma Anjali;
Pandey, Tushar;
Kanojiya, Sanjeev;
Pandey, Richa;
Shukla, Rakesh Kumar;
Tripathi, Vineeta

Publication type:

Article

COMPUTATIONAL VALIDATION OF BIO-ACTIVE COMPOUNDS FROM EMBLICA OFFICINALIS GAERTN. AGAINST THE NUCLEAR FACTOR ERYTHROID 2-RELATED FACTOR 2 (NFE2L2) IN TYPE 2 DIABETES MELLITUS.

Published in:

Indian Drugs, 2025, v. 62, n. 3, p. 38, doi. 10.53879/id.62.03.14906

By:

Tripathy, Chandra S.;
Behera, Santosh K.;
Parida, Sagarika

Publication type:

Article

A Comprehensive Study of the Synthesis, Spectral Characteristics, Quantum–Chemical Molecular Electron Density Theory, and In Silico Future Perspective of Novel CBr 3 -Functionalyzed Nitro-2-Isoxazolines Obtained via (3 + 2) Cycloaddition of (E)-3,3,3-Tribromo-1-Nitroprop-1-ene

Published in:

Molecules, 2025, v. 30, n. 10, p. 2149, doi. 10.3390/molecules30102149

By:

Zawadzińska-Wrochniak, Karolina;
Kula, Karolina;
Ríos-Gutiérrez, Mar;
Gostyński, Bartłomiej;
Krawczyk, Tomasz;
Jasiński, Radomir

Publication type:

Article

Allosteric enhancement of MAP kinase p38α's activity and substrate selectivity by docking interactions.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 8, p. 704, doi. 10.1038/nsmb.2861

By:

Tokunaga, Yuji;
Takeuchi, Koh;
Takahashi, Hideo;
Shimada, Ichio

Publication type:

Article

Structure‐ and Interaction‐Based Design of Anti‐SARS‐CoV‐2 Aptamers.

Published in:

Chemistry - A European Journal, 2022, v. 28, n. 12, p. 1, doi. 10.1002/chem.202104481

By:

Mironov, Vladimir;
Shchugoreva, Irina A.;
Artyushenko, Polina V.;
Morozov, Dmitry;
Borbone, Nicola;
Oliviero, Giorgia;
Zamay, Tatiana N.;
Moryachkov, Roman V.;
Kolovskaya, Olga S.;
Lukyanenko, Kirill A.;
Song, Yanling;
Merkuleva, Iuliia A.;
Zabluda, Vladimir N.;
Peters, Georgy;
Koroleva, Lyudmila S.;
Veprintsev, Dmitry V.;
Glazyrin, Yury E.;
Volosnikova, Ekaterina A.;
Belenkaya, Svetlana V.;
Esina, Tatiana I.

Publication type:

Article

Through the Looking Glass: Chiral Recognition of Substrates and Products at the Active Sites of Racemases and Epimerases.

Published in:

Chemistry - A European Journal, 2020, v. 26, n. 46, p. 10367, doi. 10.1002/chem.201905826

By:

Bearne, Stephen L.

Publication type:

Article

Electrostatics and Intrinsic Disorder Drive Translocon Binding of the SRP Receptor FtsY.

Published in:

Angewandte Chemie, 2016, v. 128, n. 33, p. 9696, doi. 10.1002/ange.201602905

By:

Lakomek, Nils ‐ Alexander;
Draycheva, Albena;
Bornemann, Thomas;
Wintermeyer, Wolfgang

Publication type:

Article

Design of BRC analogous peptides based on the complex BRC8–RAD51 and the preliminary study on the peptide structures.

Published in:

Amino Acids, 2020, v. 52, n. 5, p. 831, doi. 10.1007/s00726-020-02856-x

By:

Zhao, Dongxin;
Lu, Kui;
Liu, Guangbin;
Zhu, Hanjing;
Ma, Li;
Qi, Jianzhao;
Yuan, Libo

Publication type:

Article

ClusPro PeptiDock: efficient global docking of peptide recognition motifs using FFT.

Published in:

Bioinformatics, 2017, v. 33, n. 20, p. 3299, doi. 10.1093/bioinformatics/btx216

By:

Porter, Kathryn A.;
Bing Xia;
Beglov, Dmitri;
Bohnuud, Tanggis;
Alam, Nawsad;
Schueler-Furman, Ora;
Kozakov, Dima

Publication type:

Article

JADOPPT: java based AutoDock preparing and processing tool.

Published in:

Bioinformatics, 2017, v. 33, n. 4, p. 583, doi. 10.1093/bioinformatics/btw677

By:

García-Pérez, Carlos;
Peláez, Rafael;
Therón, Roberto;
López-Pérez, José Luis

Publication type:

Article

Accounting for pairwise distance restraints in FFT-based protein--protein docking.

Published in:

Bioinformatics, 2016, v. 32, n. 21, p. 3342, doi. 10.1093/bioinformatics/btw306

By:

Bing Xia;
Vajda, Sandor;
Kozakov, Dima

Publication type:

Article

PEPSI-Dock: a detailed data-driven protein-protein interaction potential accelerated by polar Fourier correlation.

Published in:

Bioinformatics, 2016, v. 32, n. 17, p. i693, doi. 10.1093/bioinformatics/btw443

By:

Neveu, Emilie;
Ritchie, David W.;
Popov, Petr;
Grudinin, Sergei

Publication type:

Article

NRGsuite: a PyMOL plugin to perform docking simulations in real time using FlexAID.

Published in:

Bioinformatics, 2015, v. 31, n. 23, p. 3856, doi. 10.1093/bioinformatics/btv458

By:

Gaudreault, Francis;
Morency, Louis-Philippe;
Najmanovich, Rafael J.

Publication type:

Article

MEGADOCK 4.0: an ultra–high-performance protein–protein docking software for heterogeneous supercomputers.

Published in:

Bioinformatics, 2014, v. 30, n. 22, p. 3281

By:

Matsuzaki, Yuri;
Ishida, Takashi;
Ohue, Masahito;
Shimoda, Takehiro;
Akiyama, Yutaka;
Suzuki, Shuji

Publication type:

Article

Specificity and affinity quantification of protein–protein interactions.

Published in:

Bioinformatics, 2013, v. 29, n. 9, p. 1127, doi. 10.1093/bioinformatics/btt121

By:

Yan, Zhiqiang;
Guo, Liyong;
Hu, Liang;
Wang, Jin

Publication type:

Article

Estimation of Hydrazone Derivative Compounds as Anti-Bacterial Agents Against Staphylococcus aureous Through Molecular Docking and Self Consisted Field.

Published in:

Trends in Sciences, 2023, v. 20, n. 8, p. 1, doi. 10.48048/tis.2023.5593

By:

Frimayanti, Neni;
Octaviani, Melzi;
Wulandari, Gety;
Zamri, Adel

Publication type:

Article

Preparation and Antioxidant Activities of Phenylethanoids from Dracocephalum heterophyllum.

Published in:

Separations (2297-8739), 2022, v. 9, n. 5, p. 111, doi. 10.3390/separations9050111

By:

Lv, Yue;
Wang, Ze;
Wu, Qian;
Fang, Yan;
Wang, Qilan;
Li, Gang;
Dang, Jun

Publication type:

Article

An alternative pathway for membrane protein biogenesis at the endoplasmic reticulum.

Published in:

Communications Biology, 2021, v. 4, n. 1, p. 1, doi. 10.1038/s42003-021-02363-z

By:

O'Keefe, Sarah;
Zong, Guanghui;
Duah, Kwabena B.;
Andrews, Lauren E.;
Shi, Wei Q.;
High, Stephen

Publication type:

Article

Phylogenetic Analysis and Protein Modelling of Isoflavonoid Synthase Highlights Key Catalytic Sites towards Realising New Bioengineering Endeavours.

Published in:

Bioengineering (Basel), 2022, v. 9, n. 11, p. 609, doi. 10.3390/bioengineering9110609

By:

Sajid, Moon;
Stone, Shane R.;
Kaur, Parwinder

Publication type:

Article

Chemical and Biological Properties of Different Romanian Populations of Hyssopus officinalis Correlated via Molecular Docking.

Published in:

Plants (2223-7747), 2024, v. 13, n. 22, p. 3259, doi. 10.3390/plants13223259

By:

Imbrea, Ilinca Merima;
Osiceanu, Magdalena;
Hulea, Anca;
Suleiman, Mukhtar Adeiza;
Popescu, Iuliana;
Floares, Doris;
Onisan, Emilian;
Neacșu, Alina-Georgeta;
Popescu, Cosmin Alin;
Hulea, Calin;
Pop, Georgeta;
Niță, Simona;
Imbrea, Florin;
Obistioiu, Diana

Publication type:

Article

Structure-Based Design, Virtual Screening, and Discovery of Novel Patulin Derivatives as Biogenic Photosystem II Inhibiting Herbicides.

Published in:

Plants (2223-7747), 2024, v. 13, n. 12, p. 1710, doi. 10.3390/plants13121710

By:

Wang, He;
Zhang, Jing;
Ji, Yu;
Guo, Yanjing;
Liu, Qing;
Chang, Yuan;
Qiang, Sheng;
Chen, Shiguo

Publication type:

Article

In Silico Analysis of Glutamate Receptors in Capsicum chinense : Structure, Evolution, and Molecular Interactions.

Published in:

Plants (2223-7747), 2024, v. 13, n. 6, p. 812, doi. 10.3390/plants13060812

By:

León-García, Fabiola;
García-Laynes, Federico;
Estrada-Tapia, Georgina;
Monforte-González, Miriam;
Martínez-Estevez, Manuel;
Echevarría-Machado, Ileana

Publication type:

Article

Computational Repurposing of Certain Monoclonal Antibodies for the Treatment of Systemic Lupus Erythematosus.

Published in:

Turkish Journal of Immunology, 2023, v. 11, n. 2, p. 51, doi. 10.4274/tji.galenos.2023.88700

By:

Al-Madhagi, Haitham Ahmed

Publication type:

Article

Evolution from the Prokaryotic to the Higher Plant Chloroplast Signal Recognition Particle: The Signal Recognition Particle RNA Is Conserved in Plastids of a Wide Range of Photosynthetic Organisms.

Published in:

Plant Cell, 2012, v. 24, n. 12, p. 4819, doi. 10.1105/tpc.112.102996

By:

Träger, Chantal;
Rosenblad, Magnus Alm;
Ziehe, Dominik;
Garcia-Petit, Christel;
Schrader, Lukas;
Kock, Klaus;
Richter, Christine Vera;
Klinkert, Birgit;
Narberhaus, Franz;
Herrmann, Christian;
Hofmann, Eckhard;
Aronsson, Henrik;
Schünemann, Danja

Publication type:

Article

Co-expression and significance of Dok2 and Ras p21 protein activator 1 in breast cancer.

Published in:

Oncology Letters, 2017, v. 14, n. 5, p. 5386, doi. 10.3892/ol.2017.6844

By:

JIANGRONG HUANG;
XIAOCHUN PENG;
KUN ZHANG;
CHUNYAN LI;
BO SU;
YANXIANG ZHANG;
WANGUI YU

Publication type:

Article

In-Vitro, In-Vivo, Molecular Docking and ADMET Studies of 2-Substituted 3,7-Dihydroxy-4H-chromen-4-one for Oxidative Stress, Inflammation and Alzheimer's Disease.

Published in:

Metabolites (2218-1989), 2022, v. 12, n. 11, p. 1055, doi. 10.3390/metabo12111055

By:

Mahnashi, Mater H.;
Alshahrani, Mohammed Abdulrahman;
Nahari, Mohammed H.;
Hassan, Syed Shams ul;
Jan, Muhammad Saeed;
Ayaz, Muhammad;
Ullah, Farhat;
Alshehri, Osama M.;
Alshehri, Mohammad Ali;
Rashid, Umer;
Sadiq, Abdul

Publication type:

Article

PA1 cells containing a truncated DNA polymerase β protein are more sensitive to gamma radiation.

Published in:

Radiation Oncology Journal, 2022, v. 40, n. 1, p. 66, doi. 10.3857/roj.2021.00689

By:

Patra, Anutosh;
Nag, Anish;
Chakraborty, Anindita;
Bhattacharyya, Nandan

Publication type:

Article

Antinociceptive Activity of Chemical Components of Essential Oils That Involves Docking Studies: A Review.

Published in:

Frontiers in Pharmacology, 2020, v. 11, p. 1, doi. 10.3389/fphar.2020.00777

By:

Assis, Davidson Barbosa;
Aragão Neto, Humberto de Carvalho;
da Fonsêca, Diogo Vilar;
de Andrade, Humberto Hugo Nunes;
Braga, Renan Marinho;
Badr, Nader;
Maia, Mayara dos Santos;
Castro, Ricardo Dias;
Scotti, Luciana;
Scotti, Marcus Tullius;
de Almeida, Reinaldo Nóbrega

Publication type:

Article

Molecular characterization of a Minus-C odorant-binding protein from Cyrtotrachelus buqueti (Coleoptera: Curculionidae).

Published in:

Frontiers in Physiology, 2025, p. 1, doi. 10.3389/fphys.2025.1586738

By:

Liu, Long;
Li, Yangdi;
Yang, Hua;
Wang, Fan;
Huang, Qiong

Publication type:

Article

In silico Drug Repurposing for COVID‐19: Targeting SARS‐CoV‐2 Proteins through Docking and Consensus Ranking.

Published in:

Molecular Informatics, 2021, v. 40, n. 1, p. 1, doi. 10.1002/minf.202000115

By:

Cavasotto, Claudio N.;
Di Filippo, Juan I.

Publication type:

Article

ALADDIN: Docking Approach Augmented by Machine Learning for Protein Structure Selection Yields Superior Virtual Screening Performance.

Published in:

Molecular Informatics, 2020, v. 39, n. 4, p. 1, doi. 10.1002/minf.201900103

By:

Fan, Ningning;
Bauer, Christoph A.;
Stork, Conrad;
Bruyn Kops, Christina;
Kirchmair, Johannes

Publication type:

Article

Molecular Characterization, Purification, and Mode of Action of Enterocin KAE01 from Lactic Acid Bacteria and Its In Silico Analysis against MDR/ESBL Pseudomonas aeruginosa.

Published in:

Genes, 2022, v. 13, n. 12, p. 2333, doi. 10.3390/genes13122333

By:

Bashir, Asma;
Ali, Kashif;
Bux, Khair;
Farid, Neha;
Khaireabadi, Mitra;
Hassan, Khwaja Ali;
Hussain, Abrar;
Fatima, Kiran;
Mehmood, Shahab;
Haider, Syed Ali;
Herwig, Ralf

Publication type:

Article

Docking Study on Anti-HIV-1 Activity of Secondary Metabolites from Zingiberaceae Plants.

Published in:

Journal of Pharmacy & Bioallied Sciences, 2020, v. 12, p. S763, doi. 10.4103/jpbs.JPBS_261_19

By:

Zubair, Muhammad Sulaiman;
Maulana, Saipul;
Widodo, Agustinus;
Mukaddas, Alwiyah;
Pitopang, Ramadanil

Publication type:

Article

COMPUTATIONAL INVESTIGATION OF IMPORTANT PHYTOCOMPOUNDS AND IN SILICO ANTIDIABETIC ACTIVITY IDENTIFIED FROM PENTATROPIS MICROPHYLLA.

Published in:

Obstetrics & Gynaecology Forum, 2024, v. 34, n. 2, p. 643

By:

Lokeshwar, T.;
Arthanari, Abirami

Publication type:

Article

GNINA 1.0: molecular docking with deep learning.

Published in:

Journal of Cheminformatics, 2021, v. 13, n. 1, p. 1, doi. 10.1186/s13321-021-00522-2

By:

McNutt, Andrew T.;
Francoeur, Paul;
Aggarwal, Rishal;
Masuda, Tomohide;
Meli, Rocco;
Ragoza, Matthew;
Sunseri, Jocelyn;
Koes, David Ryan

Publication type:

Article

EDock: blind protein–ligand docking by replica-exchange monte carlo simulation.

Published in:

Journal of Cheminformatics, 2020, v. 12, n. 1, p. 1, doi. 10.1186/s13321-020-00440-9

By:

Zhang, Wenyi;
Bell, Eric W.;
Yin, Minghao;
Zhang, Yang

Publication type:

Article

Chaos-embedded particle swarm optimization approach for protein-ligand docking and virtual screening.

Published in:

Journal of Cheminformatics, 2018, v. 10, n. 1, p. 1, doi. 10.1186/s13321-018-0320-9

By:

Tai, Hio Kuan;
Jusoh, Siti Azma;
Siu, Shirley W. I.

Publication type:

Article

Efficient iterative virtual screening with Apache Spark and conformal prediction.

Published in:

Journal of Cheminformatics, 2018, v. 10, n. 1, p. 1, doi. 10.1186/s13321-018-0265-z

By:

Ahmed, Laeeq;
Georgiev, Valentin;
Capuccini, Marco;
Toor, Salman;
Schaal, Wesley;
Laure, Erwin;
Spjuth, Ola

Publication type:

Article

How to Solve the Problems of Docking into a Symmetric Binding Site: The Example of the hERG Channel.

Published in:

Scientia Pharmaceutica, 2013, v. 81, n. 3, p. 677, doi. 10.3797/scipharm.1307-01

By:

SCHIESARO, Andrea;
RICHTER, Lars;
ECKER, Gerhard F.

Publication type:

Article

Expression and Mutation of SLC45A2 Affects Iris Color in Quail.

Published in:

Journal of Poultry Science, 2024, v. 61, p. 1, doi. 10.2141/jpsa.2024015

By:

Linke Huo;
Xiaohui Zhang;
Youzhi Pang;
Yanxia Qi;
Shiwei Ren;
Fanghu Wu;
Yuanyuan Shang;
Jinquan Xi

Publication type:

Article

Computational profiling of antidepressants-induced molecular docking with placental proteins (IGFBP-1, PlGF-1 and GATA3).

Published in:

Romanian Journal of Medical Practice, 2024, v. 19, n. 4, p. 370, doi. 10.37897/RJMP.2024.4.12

By:

AL-SARAY, Sarah T.;
HUSSEIN, Baydaa A.;
DHABIAN, Saja Z.;
AL-ALI, Ali A.;
HASHIM, Hayder O.;
MOHAMMED, Mudher K.

Publication type:

Article

Synthesis, Spectral Analysis, Molecular Docking and Biological Evaluation of Cyclohepta[b]indole Derivatives.

Published in:

Croatica Chemica Acta, 2019, v. 92, n. 3, p. 347, doi. 10.5562/cca3375

By:

Amuthavalli, Ayyachamy Pandian;
Prakash, Babu;
Edison, David;
Velmurugan, Rajendran

Publication type:

Article

QSAR Study on Caffeine Derivatives Docked on Poly(A)RNA Polymerase Protein Cid1.

Published in:

Croatica Chemica Acta, 2016, v. 89, n. 1, p. 17, doi. 10.5562/cca2733

By:

Harsa, Teodora E.;
Harsa, Alexandra M.;
Szefler, Beata;
Diudea, Mircea V.

Publication type:

Article

Dysregulated Gab1 signalling in triple negative breast cancer.

Published in:

Cell Communication & Signaling, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12964-024-01542-9

By:

Bongartz, Hannes;
Mehwald, Nora;
Seiß, Elena A.;
Schumertl, Tim;
Naß, Norbert;
Dittrich, Anna

Publication type:

Article

ELF5 and DOK7 regulation in anti-estrogen treated cells and tumors.

Published in:

Cancer Cell International, 2016, v. 16, p. 1, doi. 10.1186/s12935-016-0282-9

By:

Fitzgerald, Lily M.;
Browne, Eva P.;
Christie, Kevin D.;
Punska, Elizabeth C.;
Simmons, Leo O.;
Williams, Kristin E.;
Pentecost, Brian T.;
Jawale, Rahul M.;
Otis, Christopher N.;
Arcaro, Kathleen F.

Publication type:

Article

DOK7 congenital myasthenic syndrome: case series and review of literature.

Published in:

BMC Neurology, 2024, v. 24, n. 1, p. 1, doi. 10.1186/s12883-024-03713-0

By:

Ziaadini, Bentolhoda;
Ghaderi Yazdi, Bardyia;
Dirandeh, Elham;
Boostani, Reza;
Karimi, Narges;
Panahi, Akram;
Kariminejad, Ariana;
Fadaee, Mahsa;
Ahangari, Fatemeh;
Nafissi, Shahriar

Publication type:

Article

Computational redesign of a fluorogen activating protein with Rosetta.

Published in:

PLoS Computational Biology, 2021, v. 17, n. 11, p. 1, doi. 10.1371/journal.pcbi.1009555

By:

Bozhanova, Nina G.;
Harp, Joel M.;
Bender, Brian J.;
Gavrikov, Alexey S.;
Gorbachev, Dmitry A.;
Baranov, Mikhail S.;
Mercado, Christina B.;
Zhang, Xuan;
Lukyanov, Konstantin A.;
Mishin, Alexander S.;
Meiler, Jens

Publication type:

Article

Posttranslational insertion of small membrane proteins by the bacterial signal recognition particle.

Published in:

PLoS Biology, 2020, v. 18, n. 9, p. 1, doi. 10.1371/journal.pbio.3000874

By:

Steinberg, Ruth;
Origi, Andrea;
Natriashvili, Ana;
Sarmah, Pinku;
Licheva, Mariya;
Walker, Princess M.;
Kraft, Claudine;
High, Stephen;
Luirink, Joen;
Shi, Wei. Q.;
Helmstädter, Martin;
Ulbrich, Maximilian H.;
Koch, Hans-Georg

Publication type:

Article

Synthesis and Characterization of Some Novel N-Phenylpyrazole Analogues for the Evaluation of their Potentials as Anticancer, Antimicrobial and Antioxidant Agents.

Published in:

Indian Journal of Pharmaceutical Education & Research, 2020, v. 54, p. 633, doi. 10.5530/ijper.54.3s.163

By:

Pothuri, Vijai Varma;
Machiraju Palagummi, Venkata Satya;
Rao Vasa, Samba Siva

Publication type:

Article