Works about RNA-protein interactions

Results: 929

Structural Basis for the GGGGCC Repeat RNA Binding to SRSF2 Protein<sup>†</sup>.

Published in:

Chinese Journal of Chemistry, 2025, v. 43, n. 12, p. 1348, doi. 10.1002/cjoc.70004

By:

Liu, Yu;
Yang, Yingquan;
Zhang, Yuchao;
Yi, Jie;
Wan, Liqi;
Wang, Yang;
Gao, Qian;
Xu, Dong;
Guo, Pei;
Han, Da

Publication type:

Article

Far from Membranes, BEACH Domains Regulate Stress-Related mRNAs.

Published in:

PLoS Biology, 2015, v. 13, n. 7, p. 1, doi. 10.1371/journal.pbio.1002189

By:

Robinson, Richard

Publication type:

Article

Reciprocal Regulation of Protein Synthesis and Carbon Metabolism for Thylakoid Membrane Biogenesis.

Published in:

PLoS Biology, 2013, v. 11, n. 2, p. 1, doi. 10.1371/journal.pbio.1001482

By:

Bohne, Alexandra-Viola;
Schwarz, Christian;
Schottkowsk, Marco;
Lidschreiber, Michael;
Piotrowski, Markus;
Zerges, William;
Nickelsen, Jö rg

Publication type:

Article

A Novel Function for Fragile X Mental Retardation Protein in Translational Activation.

Published in:

PLoS Biology, 2009, v. 7, n. 1, p. e1000016, doi. 10.1371/journal.pbio.1000016

By:

Bechara, Elias G.;
Didiot, Marie Cecile;
Melko, Mireille;
Davidovic, Laetitia;
Bensaid, Mounia;
Martin, Patrick;
Castets, Marie;
Pognonec, Philippe;
Khandjian, Edouard W.;
Moine, Hervé;
Bardoni, Barbara

Publication type:

Article

Differential Recruitment of Pre-mRNA Splicing Factors to Alternatively Spliced Transcripts In Vivo.

Published in:

PLoS Biology, 2005, v. 3, n. 10, p. 1, doi. 10.1371/journal.pbio.0030374

By:

Mabon, Stephen A;
Misteli, Tom

Publication type:

Article

Computationally predicting protein-RNA interactions using only positive and unlabeled examples.

Published in:

Journal of Bioinformatics & Computational Biology, 2015, v. 13, n. 3, p. -1, doi. 10.1142/S021972001541005X

By:

Cheng, Zhanzhan;
Zhou, Shuigeng;
Guan, Jihong

Publication type:

Article

USING BINDING PROFILES TO PREDICT BINDING SITES OF TARGET RNAs.

Published in:

Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 6, p. 697, doi. 10.1142/S0219720011005628

By:

POOLSAP, UNYANEE;
KATO, YUKI;
SATO, KENGO;
AKUTSU, TATSUYA

Publication type:

Article

Chemically Modified Poly(A) Analogs Targeting PABP: Structure Activity Relationship and Translation Inhibitory Properties.

Published in:

Chemistry - A European Journal, 2022, v. 28, n. 42, p. 1, doi. 10.1002/chem.202201115

By:

Perzanowska, Olga;
Smietanski, Miroslaw;
Jemielity, Jacek;
Kowalska, Joanna

Publication type:

Article

RNA-binding proteins associated with desiccation during seed development in rice.

Published in:

Biotechnology Letters, 2013, v. 35, n. 11, p. 1945, doi. 10.1007/s10529-013-1283-6

By:

Sano, Naoto;
Masaki, Shunpei;
Tanabata, Takanari;
Yamada, Tetsuya;
Hirasawa, Tadashi;
Kashiwagi, Megumi;
Kanekatsu, Motoki

Publication type:

Article

Synthesis and aggregation properties of a novel enzymatically resistant nucleoamino acid.

Published in:

Amino Acids, 2012, v. 43, n. 4, p. 1465, doi. 10.1007/s00726-012-1219-9

By:

Roviello, Giovanni;
Mottola, Anna;
Musumeci, Domenica;
Bucci, Enrico;
Pedone, Carlo

Publication type:

Article

PRINTR: Prediction of RNA binding sites in proteins using SVM and profiles.

Published in:

Amino Acids, 2008, v. 35, n. 2, p. 295, doi. 10.1007/s00726-007-0634-9

By:

Y. Wang;
Z. Xue;
G. Shen;
J. Xu

Publication type:

Article

Sex lethal controls dosage compensation in Drosophila by a non-splicing mechanism.

Published in:

Nature, 1997, v. 387, n. 6629, p. 195, doi. 10.1038/387195a0

By:

Kelley, Richard L.;
Wang, Jiwu

Publication type:

Article

Phosphorylation of RNA-binding protein controls cell cycle switch from mitotic to meiotic in fission

Published in:

Nature, 1997, v. 386, n. 6621, p. 187, doi. 10.1038/386187a0

By:

Watanabe, Yoshinori;
Shinozaki-Yabana, Satoko

Publication type:

Article

Selection of RNA-binding peptides in vivo.

Published in:

Nature, 1996, v. 380, n. 6570, p. 175, doi. 10.1038/380175a0

By:

Harada, Kazuo;
Martin, Shelley S.

Publication type:

Article

A TBP-TAF complex required for transcription of human snRNA genes by RNA polymerases II and III.

Published in:

Nature, 1995, v. 374, n. 6523, p. 653, doi. 10.1038/374653a0

By:

Henry, R. William;
Sadowski, Cynthia L.

Publication type:

Article

Crystal structure of an RNA bacteriophage coat protein-operator complex.

Published in:

Nature, 1994, v. 371, n. 6498, p. 623, doi. 10.1038/371623a0

By:

Valegard, Karin;
Murray, James B.

Publication type:

Article

Dissecting RNA function.

Published in:

Nature, 1994, v. 370, n. 6491, p. 597, doi. 10.1038/370597a0

By:

Schroeder, Renee

Publication type:

Article

A tyrosyl-tRNA synthetase can function similarly to an RNA structure in the Tetrahymena ribozyme.

Published in:

Nature, 1994, v. 370, n. 6485, p. 147, doi. 10.1038/370147a0

By:

Mohr, Georg;
Caprara, Mark G.

Publication type:

Article

Time to change partners.

Published in:

Nature, 1994, v. 370, n. 6485, p. 99, doi. 10.1038/370099a0

By:

Inoue, Tan

Publication type:

Article

Protein-protein interactions and 5'-splice-site recognition in mammalian mRNA precursors.

Published in:

Nature, 1994, v. 368, n. 6467, p. 119, doi. 10.1038/368119a0

By:

Kohtz, Jhumku D.;
Jamison, Sharon F.

Publication type:

Article

An RNA motif that binds ATP.

Published in:

Nature, 1993, v. 364, n. 6437, p. 550, doi. 10.1038/364550a0

By:

Sassanfar, Mandana;
Szostak, Jack W.

Publication type:

Article

Transcriptional antitermination.

Published in:

Nature, 1993, v. 364, n. 6436, p. 401, doi. 10.1038/364401a0

By:

Greenblatt, Jack;
Nodwell, Justin R.

Publication type:

Article

Neurodegenerative disease: a target map for TDP43.

Published in:

2011

By:

Whalley, Katherine

Publication type:

journal article

Molecular and Evolutionary Analysis of RNA–Protein Interactions in Telomerase Regulation.

Published in:

Non-Coding RNA, 2024, v. 10, n. 3, p. 36, doi. 10.3390/ncrna10030036

By:

Davis, Justin A.;
Chakrabarti, Kausik

Publication type:

Article

Emerging Role of Circular RNA-Protein Interactions.

Published in:

Non-Coding RNA, 2021, v. 7, n. 3, p. 1, doi. 10.3390/ncrna7030048

By:

Das, Arundhati;
Sinha, Tanvi;
Shyamal, Sharmishtha;
Panda, Amaresh Chandra

Publication type:

Article

RNA-Centric Approaches to Profile the RNA-Protein Interaction Landscape on Selected RNAs.

Published in:

Non-Coding RNA, 2021, v. 7, n. 1, p. 1, doi. 10.3390/ncrna7010011

By:

Gerber, André P.

Publication type:

Article

Functional Interplay between RNA Viruses and Non-Coding RNA in Mammals.

Published in:

Non-Coding RNA, 2019, v. 5, n. 1, p. 1, doi. 10.3390/ncrna5010007

By:

Damas, Nkerorema Djodji;
Fossat, Nicolas;
Scheel, Troels K. H.

Publication type:

Article

OLIGONUCLEOTIDE ANALOGUE INTERFERENCE WITH THE HIV-1 TAT PROTEIN-TAR RNA INTERACTION.

Published in:

Nucleosides, Nucleotides & Nucleic Acids, 2001, v. 20, n. 4-7, p. 471, doi. 10.1081/NCN-100002321

By:

Arzumanov, Andrey;
Walsh, AndrewP.;
Liu, Xiaohai;
Rajwanshi, VivekK.;
Wengel, Jesper;
Gait, MichaelJ.

Publication type:

Article

Effects of feeding diets naturally contaminated with Fusarium mycotoxins on protein metabolism in late gestation and lactation of first-parity sows.

Published in:

Journal of Animal Science, 2010, v. 88, n. 3, p. 998, doi. 10.2527/jas.2008-1633

By:

Díaz-Llano, G.;
Smith, T. K.;
Boermans, H. J.;
Caballero-Cortes, C.;
Friendship, R.

Publication type:

Article

Cucumber mosaic virus Is Unable to Self-Assemble in Tobacco Plants When Transmitted by Seed.

Published in:

Plants (2223-7747), 2022, v. 11, n. 23, p. 3217, doi. 10.3390/plants11233217

By:

Vitti, Antonella;
Pagán, Israel;
Bochicchio, Brigida;
De Stradis, Angelo;
Piazzolla, Pasquale;
Scopa, Antonio;
Nuzzaci, Maria

Publication type:

Article

An anciently diverged family of RNA binding proteins maintain correct splicing of a class of ultra-long exons through cryptic splice site repression.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.89705

By:

Siachisumo, Chileleko;
Luzzi, Sara;
Aldalaqan, Saad;
Hysenaj, Gerald;
Dalgliesh, Caroline;
Cheung, Kathleen;
Gazzara, Matthew R.;
Yonchev, Ivaylo D.;
James, Katherine;
Chadegani, Mahsa Kheirollahi;
Ehrmann, Ingrid E.;
Smith, Graham R.;
Cockell, Simon J.;
Munkley, Jennifer;
Wilson, Stuart A.;
Barash, Yoseph;
Elliott, David J.

Publication type:

Article

ASAR lncRNAs control DNA replication timing through interactions with multiple hnRNP/RNA binding proteins.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.95898

By:

Thayer, Mathew;
Heskett, Michael B.;
Smith, Leslie G.;
Spellman, Paul T.;
Yates, Phillip A.

Publication type:

Article

The role of RNA in the maintenance of chromatin domains as revealed by antibody-mediated proximity labelling coupled to mass spectrometry.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.95718

By:

Choudhury, Rupam;
Venkatasubramani, Anuroop Venkateswaran;
Jie Hua;
Borsò, Marco;
Franconi, Celeste;
Kinkley, Sarah;
Forné, Ignasi;
Imhof, Axel

Publication type:

Article

Nitrogen/phosphorus leaf stoichiometry and the scaling of plant growth.

Published in:

Ecology Letters, 2005, v. 8, n. 6, p. 636, doi. 10.1111/j.1461-0248.2005.00759.x

By:

Niklas, Karl J.;
Owens, Thomas;
Reich, Peter B.;
Cobb, Edward D.;
Chave, Jerome

Publication type:

Article

The research teams of Prof. Liqin Zhang, Prof. Zhenjun Yang, Prof. Zhiqi Zhang, and Prof. Ying Guo developed functional aptamers screening of nucleic acid and drug development platform.

Published in:: Journal of Chinese Pharmaceutical Sciences, 2024, v. 33, n. 9, p. 860, doi. 10.1021/jacs.4c08824
Publication type:: Article

Localization of the rat genes encoding the RNA binding protein TIAR (Tial1) and the integrin β1 subunit (Itgb1): evidence for multiple homology relationships between the rat chromosome 19q12 region and the human genome.

Published in:

Cytogenetics & Cell Genetics, 1999, v. 87, n. 1/2, p. 106, doi. 10.1159/000015406

By:

Szpirer, C.;
Szpirer, J.;
Rivière, M.;
Van Vooren, P.;
Huez, G.;
Kruys, V.;
Gueydan, C.

Publication type:

Article

Loss-of-function mutation in PRMT9 causes abnormal synapse development by dysregulation of RNA alternative splicing.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-47107-9

By:

Shen, Lei;
Ma, Xiaokuang;
Wang, Yuanyuan;
Wang, Zhihao;
Zhang, Yi;
Pham, Hoang Quoc Hai;
Tao, Xiaoqun;
Cui, Yuehua;
Wei, Jing;
Lin, Dimitri;
Abeywanada, Tharindumala;
Hardikar, Swanand;
Halabelian, Levon;
Smith, Noah;
Chen, Taiping;
Barsyte-Lovejoy, Dalia;
Qiu, Shenfeng;
Xing, Yi;
Yang, Yanzhong

Publication type:

Article

Systematic analysis of RNA-binding proteins identifies targetable therapeutic vulnerabilities in osteosarcoma.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-47031-y

By:

Zhou, Yang;
Ray, Partho Sarothi;
Zhu, Jianguo;
Stein, Frank;
Rettel, Mandy;
Sekaran, Thileepan;
Sahadevan, Sudeep;
Perez-Perri, Joel I.;
Roth, Eva K.;
Myklebost, Ola;
Meza-Zepeda, Leonardo A.;
von Deimling, Andreas;
Fu, Chuli;
Brosig, Annika N.;
Boye, Kjetil;
Nathrath, Michaela;
Blattmann, Claudia;
Lehner, Burkhard;
Hentze, Matthias W.;
Kulozik, Andreas E.

Publication type:

Article

Structure-based prediction and characterization of photo-crosslinking in native protein–RNA complexes.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-46429-y

By:

Feng, Huijuan;
Lu, Xiang-Jun;
Maji, Suvrajit;
Liu, Linxi;
Ustianenko, Dmytro;
Rudnick, Noam D.;
Zhang, Chaolin

Publication type:

Article

Dynamic characterization and interpretation for protein-RNA interactions across diverse cellular conditions using HDRNet.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-42547-1

By:

Zhu, Haoran;
Yang, Yuning;
Wang, Yunhe;
Wang, Fuzhou;
Huang, Yujian;
Chang, Yi;
Wong, Ka-chun;
Li, Xiangtao

Publication type:

Article

Chemoproteomic capture of RNA binding activity in living cells.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-41844-z

By:

Heindel, Andrew J.;
Brulet, Jeffrey W.;
Wang, Xiantao;
Founds, Michael W.;
Libby, Adam H.;
Bai, Dina L.;
Lemke, Michael C.;
Leace, David M.;
Harris, Thurl E.;
Hafner, Markus;
Hsu, Ku-Lung

Publication type:

Article

Signal-noise metrics for RNA binding protein identification reveal broad spectrum protein-RNA interaction frequencies and dynamics.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-41284-9

By:

Kristofich, JohnCarlo;
Nicchitta, Christopher V.

Publication type:

Article

Mutagenesis and structural studies reveal the basis for the specific binding of SARS-CoV-2 SL3 RNA element with human TIA1 protein.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-39410-8

By:

Zhang, Dong;
Qiao, Lulu;
Lei, Xiaobo;
Dong, Xiaojing;
Tong, Yunguang;
Wang, Jianwei;
Wang, Zhiye;
Zhou, Ruhong

Publication type:

Article

PIE-seq: identifying RNA-binding protein targets by dual RNA-deaminase editing and sequencing.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-39054-8

By:

Ruan, Xiangbin;
Hu, Kaining;
Zhang, Xiaochang

Publication type:

Article

Connecting the speckles: Splicing kinases and their role in tumorigenesis and treatment response.

Published in:

Nucleus (1949-1034), 2015, v. 6, n. 4, p. 279, doi. 10.1080/19491034.2015.1062194

By:

Corkery, Dale P;
Holly, Alice C;
Lahsaee, Sara;
Dellaire, Graham

Publication type:

Article

Nucleolus-tethering system (NoTS).

Published in:

Nucleus (1949-1034), 2014, v. 5, n. 4, p. 1, doi. 10.4161/nucl.29837

By:

Liu, Yin;
Fang, Yuda

Publication type:

Article

RNA regulons and the RNA-protein interaction network.

Published in:

Biomolecular Concepts, 2012, v. 3, n. 5, p. 403, doi. 10.1515/bmc-2012-0016

By:

Imig, Jochen;
Kanitz, Alexander;
Gerber, AndréP.

Publication type:

Article

Paraspeckles: possible nuclear hubs by the RNA for the RNA.

Published in:

Biomolecular Concepts, 2012, v. 3, n. 5, p. 415, doi. 10.1515/bmc-2012-0017

By:

Hirose, Tetsuro;
Nakagawa, Shinichi

Publication type:

Article

Dissection and prediction of RNA-binding sites on proteins.

Published in:

Biomolecular Concepts, 2010, v. 1, n. 5/6, p. 345, doi. 10.1515/BMC.2010.037

By:

Pérez-Cano, Laura;
Fernández-Recio, Juan

Publication type:

Article

hnRNP A1 interacts with the genomic and subgenomic RNA promoters of Sindbis virus and is required for the synthesis of G and SG RNA.

Published in:

Journal of Biomedical Science, 2010, v. 17, p. 59, doi. 10.1186/1423-0127-17-59

By:

Hongxing Gui;
Chi-Wei Lu;
Adams, Sandra;
Stollar, Victor;
Mei-Ling Li

Publication type:

Article