Works matching DE "RNA editing"

Results: 1473

3'UTR RNA editing driven by ADAR1 modulates MDM2 expression in breast cancer cells.

Published in:

Functional & Integrative Genomics, 2025, v. 25, n. 1, p. 1, doi. 10.1007/s10142-025-01611-3

By:

Almeric, Elanur;
Karagozoglu, Deniz;
Cicek, Mustafa;
Dioken, Didem Naz;
Tac, Huseyin Avni;
Cicek, Esra;
Kirim, Busra Aytul;
Gurcuoglu, Irmak;
Sezerman, Osman Ugur;
Ozlu, Nurhan;
Erson-Bensan, Ayse Elif

Publication type:

Article

ADAR2-mediated Q/R editing of GluA2 in homeostatic synaptic plasticity.

Published in:

Science Signaling, 2025, v. 18, n. 886, p. 1, doi. 10.1126/scisignal.adr1442

By:

Peterson, Lucy;
Coca, Richard;
Parikh, Shreya;
McCarthy, Katrina;
Man, Heng-Ye

Publication type:

Article

Phylogenomic Inference Suggests Differential Deep Time Phylogenetic Signals from Nuclear and Organellar Genomes in Gymnosperms.

Published in:

Plants (2223-7747), 2025, v. 14, n. 9, p. 1335, doi. 10.3390/plants14091335

By:

Lin, Yu-En;
Wu, Chung-Shien;
Wu, Yu-Wei;
Chaw, Shu-Miaw

Publication type:

Article

De novo assembly and comparative analysis of cherry (Prunus subgenus Cerasus) mitogenomes.

Published in:

Frontiers in Plant Science, 2025, p. 1, doi. 10.3389/fpls.2025.1568698

By:

Zhai, Tianya;
Zhao, Zhuang;
Fu, Chenlong;
Huang, Lizhen;
Jiang, Changci;
Li, Meng;
Wang, Zefu;
Yang, Xiaoyue

Publication type:

Article

Complete mitochondrial genome of Ficus hirta and its comparative analysis.

Published in:

Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1530105

By:

Deng, Wangdong;
Cai, Xinyi

Publication type:

Article

Constraints on the optimization of gene product diversity.

Published in:

Molecular Systems Biology, 2025, v. 21, n. 5, p. 472, doi. 10.1038/s44320-025-00095-4

By:

Jiang, Daohan;
Kejiou, Nevraj;
Qiu, Yi;
Palazzo, Alexander F;
Pennell, Matt

Publication type:

Article

REDInet: a temporal convolutional network-based classifier for A-to-I RNA editing detection harnessing million known events.

Published in:

Briefings in Bioinformatics, 2025, v. 26, n. 2, p. 1, doi. 10.1093/bib/bbaf107

By:

Fonzino, Adriano;
Mazzacuva, Pietro Luca;
Handen, Adam;
Silvestris, Domenico Alessandro;
Arnold, Annette;
Pecori, Riccardo;
Pesole, Graziano;
Picardi, Ernesto

Publication type:

Article

Regulation of Na<sup>+</sup>/K<sub>+</sub> ATPase Transport Velocity by RNA Editing.

Published in:

PLoS Biology, 2010, v. 8, n. 11, p. 1, doi. 10.1371/journal.pbio.1000540

By:

Colina, Claudia;
Palavicini, Juan Pablo;
Srikumar, Deepa;
Holmgren, Miguel;
Rosenthal, Joshua J. C.

Publication type:

Article

RNA Polymerase Promotes Splicing, Prevents Degradation.

Published in:

PLoS Biology, 2006, v. 4, n. 6, p. e183, doi. 10.1371/journal.pbio.0040183

By:

Robinson, Richard

Publication type:

Article

RNA modification writers influence tumor microenvironment in gastric cancer and prospects of targeted drug therapy.

Published in:

Journal of Bioinformatics & Computational Biology, 2022, v. 20, n. 2, p. 1, doi. 10.1142/S0219720022500044

By:

Song, Peng;
Zhou, Sheng;
Qi, Xiaoyang;
Jiao, Yuwen;
Gong, Yu;
Zhao, Jie;
Yang, Haojun;
Qian, Zhifen;
Qian, Jun;
Tang, Liming

Publication type:

Article

Dysfunctional chloroplasts up-regulate the expression of mitochondrial genes in Arabidopsis seedlings.

Published in:

Photosynthesis Research, 2016, v. 127, n. 2, p. 151, doi. 10.1007/s11120-015-0161-6

By:

Liao, Jo-Chien;
Hsieh, Wei-Yu;
Tseng, Ching-Chih;
Hsieh, Ming-Hsiun

Publication type:

Article

PPR protein PDM1/SEL1 is involved in RNA editing and splicing of plastid genes in Arabidopsis thaliana.

Published in:

Photosynthesis Research, 2015, v. 126, n. 2/3, p. 311, doi. 10.1007/s11120-015-0171-4

By:

Zhang, Hong-Dao;
Cui, Yong-Lan;
Huang, Chao;
Yin, Qian-Qian;
Qin, Xue-Mei;
Xu, Te;
He, Xiao-Fang;
Zhang, Yi;
Li, Zi-Ran;
Yang, Zhong-Nan

Publication type:

Article

Cloning and Transcript Analyses of the Chimeric Gene Associated With Cytoplasmic Male Sterility in Cauliflower ( Brassica oleracea var. botrytis).

Published in:

Euphytica, 2006, v. 151, n. 1, p. 111, doi. 10.1007/s10681-005-9049-4

By:

Wang, Chunguo;
Chen, Xiaoqiang;
Lan, Tianying;
Li, Hui;
Song, Wenqin

Publication type:

Article

Early transcription of Bacillus thuringiensis cry genes in strains active on Lepidopteran species and the role of gene content on their expression.

Published in:

Antonie van Leeuwenhoek, 2014, v. 105, n. 6, p. 1007, doi. 10.1007/s10482-014-0160-1

By:

Porcar, Manuel;
Déleclusse, Armelle;
Ibarra, Jorge;
Juárez-Pérez, Víctor

Publication type:

Article

Regulation of serotonin-2C receptor G-protein coupling by RNA editing.

Published in:

Nature, 1997, v. 387, n. 6630, p. 303, doi. 10.1038/387303a0

By:

Burns, Colleen M.;
Chu, Hsin

Publication type:

Article

Message change for a fat controller.

Published in:

Nature, 1997, v. 387, n. 6630, p. 242, doi. 10.1038/387242a0

By:

Scott, James

Publication type:

Article

RNA editing of hepatitis delta virus antigenome by dsRNA-adenosine deaminase.

Published in:

Nature, 1996, v. 380, n. 6573, p. 454, doi. 10.1038/380454a0

By:

Polson, Andrew G.;
Bass, Brenda L.

Publication type:

Article

The long and the short of it.

Published in:

Nature, 1996, v. 380, n. 6573, p. 391, doi. 10.1038/380391a0

By:

Benne, Rob

Publication type:

Article

Evolution of RNA editing in kinetoplastic protozoa.

Published in:

Nature, 1994, v. 368, n. 6469, p. 345, doi. 10.1038/368345a0

By:

Maslov, Dmitri A.;
Avila, Herbert A.

Publication type:

Article

Pan-editing in the beginning.

Published in:

Nature, 1994, v. 368, n. 6469, p. 288, doi. 10.1038/368288a0

By:

Gray, Michael W.

Publication type:

Article

Prioritization of Trypanosoma brucei editosome protein interactions interfaces at residue resolution through proteome-scale network analysis.

Published in:

BMC Molecular & Cell Biology, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12860-024-00499-4

By:

Poorinmohammad, Naghmeh;
Salavati, Reza

Publication type:

Article

Hippocampal adenosine-to-inosine RNA editing in sepsis: dynamic changes and influencing factors.

Published in:

Brain Communications, 2024, v. 6, n. 4, p. 1, doi. 10.1093/braincomms/fcae260

By:

Jin, Yun-Yun;
Liang, Ya-Ping;
Wei, Zhi-Yuan;
Sui, Wei-Jia;
Chen, Jian-Huan

Publication type:

Article

Differential microRNA editing may drive target pathway switching in human temporal lobe epilepsy.

Published in:

Brain Communications, 2024, v. 6, n. 1, p. 1, doi. 10.1093/braincomms/fcad355

By:

Lau, Kelvin E How;
Nguyen, Ngoc T;
Kesavan, Jaideep C;
Langa, Elena;
Fanning, Kevin;
Brennan, Gary P;
Sanz-Rodriguez, Amaya;
Villegas-Salmerón, Javier;
Yan, Yan;
Venø, Morten T;
Mills, James D;
Rosenow, Felix;
Bauer, Sebastian;
Kjems, Jørgen;
Henshall, David C

Publication type:

Article

Reduced RNA adenosine-to-inosine editing in hippocampus vasculature associated with Alzheimer's disease.

Published in:

Brain Communications, 2022, v. 4, n. 5, p. 1, doi. 10.1093/braincomms/fcac238

By:

Crooke III, Philip S.;
Tossberg, John T.;
Heinrich, Rachel M.;
Porter, Krislyn P.;
Aune, Thomas M.

Publication type:

Article

Functional diversity of voltage‐gated sodium channel in Drosophila suzukii (Matsumura).

Published in:

Pest Management Science, 2024, v. 80, n. 2, p. 592, doi. 10.1002/ps.7786

By:

Yuan, Linlin;
Zhang, Kun;
Wang, Zhenglei;
Xian, Limin;
Liu, Kaiyang;
Wu, Shaoying

Publication type:

Article

Unique post‐translational modifications diversify the sodium channels in peach aphid (Myzus persicae [Sulzer]).

Published in:

Pest Management Science, 2021, v. 77, n. 10, p. 4521, doi. 10.1002/ps.6489

By:

Wang, Hao;
Duan, WenBo;
Gao, Ruibo;
Li, Fen;
Yang, Lei;
Li, WeiZheng;
Yin, XinMing;
Wu, ShaoYing

Publication type:

Article

Molecular characterization and functional expression of voltage‐gated sodium channel variants in Apolygus lucorum (Meyer‐Dür).

Published in:

Pest Management Science, 2020, v. 76, n. 6, p. 2095, doi. 10.1002/ps.5748

By:

Zhang, Kun;
Chen, Mengli;
Wang, Hao;
Duan, Wenbo;
Wang, Qiang;
Li, Fen;
Deng, Denghui;
Bandason, Elizabeth;
Wu, Shaoying

Publication type:

Article

Evaluation of the Interplay between the ADAR Editome and Immunotherapy in Melanoma.

Published in:

Non-Coding RNA, 2021, v. 7, n. 1, p. 1, doi. 10.3390/ncrna7010005

By:

Tusup, Marina;
Cheng, Phil F.;
Picardi, Ernesto;
Raziunaite, Austeja;
Dummer, Reinhard;
Levesque, Mitchell P.;
French, Lars E.;
Guenova, Emmanuella;
Kundig, Thomas M.;
Pascolo, Steve

Publication type:

Article

Human Brain Shows Recurrent Non-Canonical MicroRNA Editing Events Enriched for Seed Sequence with Possible Functional Consequence.

Published in:

Non-Coding RNA, 2020, v. 6, n. 2, p. 1, doi. 10.3390/ncrna6020021

By:

Paul, Deepanjan;
Ansari, Asgar Hussain;
Lal, Megha;
Mukhopadhyay, Arijit

Publication type:

Article

Analysis of the Complete Mitochondrial Genome of the Bitter Gourd (Momordica charantia).

Published in:

Plants (2223-7747), 2023, v. 12, n. 8, p. 1686, doi. 10.3390/plants12081686

By:

Niu, Yu;
Zhang, Ting;
Chen, Muxi;
Chen, Guoju;
Liu, Zhaohua;
Yu, Renbo;
Han, Xu;
Chen, Kunhao;
Huang, Aizheng;
Chen, Changming;
Yang, Yan

Publication type:

Article

Isolation and Characterization of SPOTTED LEAF42 Encoding a Porphobilinogen Deaminase in Rice.

Published in:

Plants (2223-7747), 2023, v. 12, n. 2, p. 403, doi. 10.3390/plants12020403

By:

Liu, Lin;
Wang, Yunpeng;
Tian, Yunlu;
Song, Shuang;
Wu, Zewan;
Ding, Xin;
Zheng, Hai;
Huang, Yunshuai;
Liu, Shijia;
Dong, Xiaoou;
Wan, Jianmin;
Liu, Linglong

Publication type:

Article

Plastid Phylogenomic Analyses Reveal the Taxonomic Position of Peucedanum franchetii.

Published in:

Plants (2223-7747), 2023, v. 12, n. 1, p. 97, doi. 10.3390/plants12010097

By:

Song, Boni;
Liu, Changkun;
Xie, Dengfeng;
Xiao, Yulin;
Tian, Rongming;
Li, Zixuan;
Zhou, Songdong;
He, Xingjin

Publication type:

Article

An Overview of Pentatricopeptide Repeat (PPR) Proteins in the Moss Physcomitrium patens and Their Role in Organellar Gene Expression.

Published in:

Plants (2223-7747), 2022, v. 11, n. 17, p. 2279, doi. 10.3390/plants11172279

By:

Sugita, Mamoru

Publication type:

Article

Management of Post-Harvest Anthracnose: Current Approaches and Future Perspectives.

Published in:

Plants (2223-7747), 2022, v. 11, n. 14, p. N.PAG, doi. 10.3390/plants11141856

By:

Ciofini, Alice;
Negrini, Francesca;
Baroncelli, Riccardo;
Baraldi, Elena

Publication type:

Article

Genome-Wide Analysis of Multiple Organellar RNA Editing Factor (MORF) Family in Kiwifruit (Actinidia chinensis) Reveals Its Roles in Chloroplast RNA Editing and Pathogens Stress.

Published in:

Plants (2223-7747), 2022, v. 11, n. 2, p. 146, doi. 10.3390/plants11020146

By:

Xiong, Yuhong;
Fang, Jing;
Jiang, Xiaohan;
Wang, Tengfei;
Liu, Kangchen;
Peng, Huixiang;
Zhang, Xiujun;
Zhang, Aidi

Publication type:

Article

Plastome Characterization and Phylogenomic Analysis Yield New Insights into the Evolutionary Relationships among the Species of the Subgenus Bryocles (Hosta ; Asparagaceae) in East Asia.

Published in:

Plants (2223-7747), 2021, v. 10, n. 10, p. 1980, doi. 10.3390/plants10101980

By:

Yang, JiYoung;
Choi, Mi-Jung;
Kim, Seon-Hee;
Choi, Hyeok-Jae;
Kim, Seung-Chul

Publication type:

Article

RNA Interference and CRISPR/Cas Gene Editing for Crop Improvement: Paradigm Shift towards Sustainable Agriculture.

Published in:

Plants (2223-7747), 2021, v. 10, n. 9, p. 1914, doi. 10.3390/plants10091914

By:

Rajput, Meenakshi;
Choudhary, Khushboo;
Kumar, Manish;
Vivekanand, V.;
Chawade, Aakash;
Ortiz, Rodomiro;
Pareek, Nidhi

Publication type:

Article

Chloroplast Genome of Rambutan and Comparative Analyses in Sapindaceae.

Published in:

Plants (2223-7747), 2021, v. 10, n. 2, p. 283, doi. 10.3390/plants10020283

By:

Dong, Fei;
Lin, Zhicong;
Lin, Jing;
Ming, Ray;
Zhang, Wenping

Publication type:

Article

Detection and Analysis of C-to-U RNA Editing in Rice Mitochondria-Encoded ORFs.

Published in:

Plants (2223-7747), 2020, v. 9, n. 10, p. 1277, doi. 10.3390/plants9101277

By:

Zheng, Peng;
Wang, Dongxin;
Huang, Yuqing;
Chen, Hao;
Du, Hao;
Tu, Jumin

Publication type:

Article

The Genome and Transcriptome Analysis of the Vigna mungo Chloroplast.

Published in:

Plants (2223-7747), 2020, v. 9, n. 9, p. 1247, doi. 10.3390/plants9091247

By:

Nawae, Wanapinun;
Yundaeng, Chutintorn;
Naktang, Chaiwat;
Kongkachana, Wasitthee;
Yoocha, Thippawan;
Sonthirod, Chutima;
Narong, Nattapol;
Somta, Prakit;
Laosatit, Kularb;
Tangphatsornruang, Sithichoke;
Pootakham, Wirulda

Publication type:

Article

Comparison of Chloroplast Genomes among Species of Unisexual and Bisexual Clades of the Monocot Family Araceae.

Published in:

Plants (2223-7747), 2020, v. 9, n. 6, p. 737, doi. 10.3390/plants9060737

By:

Abdullah;
Henriquez, Claudia L.;
Mehmood, Furrukh;
Shahzadi, Iram;
Ali, Zain;
Waheed, Mohammad Tahir;
Croat, Thomas B.;
Poczai, Peter;
Ahmed, Ibrar

Publication type:

Article

Assembly and Analysis of the Complete Mitochondrial Genome of Capsella bursa-pastoris.

Published in:

Plants (2223-7747), 2020, v. 9, n. 4, p. 469, doi. 10.3390/plants9040469

By:

Omelchenko, Denis O.;
Makarenko, Maxim S.;
Kasianov, Artem S.;
Schelkunov, Mikhail I.;
Logacheva, Maria D.;
Penin, Aleksey A.

Publication type:

Article

Arabidopsis RanBP2-Type Zinc Finger Proteins Related to Chloroplast RNA Editing Factor OZ1.

Published in:

Plants (2223-7747), 2020, v. 9, n. 3, p. 307, doi. 10.3390/plants9030307

By:

Gipson, Andrew B.;
Giloteaux, Ludovic;
Hanson, Maureen R.;
Bentolila, Stephane

Publication type:

Article

The Complete Chloroplast Genomes of Two Lespedeza Species: Insights into Codon Usage Bias, RNA Editing Sites, and Phylogenetic Relationships in Desmodieae (Fabaceae: Papilionoideae).

Published in:

Plants (2223-7747), 2020, v. 9, n. 1, p. 1, doi. 10.3390/plants9010051

By:

Yamuna Somaratne;
De-Long Guan;
Wen-Qiang Wang;
Liang Zhao;
Sheng-Quan Xu

Publication type:

Article

Chloroplast Genome Sequence of Artemisia scoparia: Comparative Analyses and Screening of Mutational Hotspots.

Published in:

Plants (2223-7747), 2019, v. 8, n. 11, p. 476, doi. 10.3390/plants8110476

By:

Iram, Shabina;
Hayat, Muhammad Qasim;
Tahir, Muhammad;
Gul, Alvina;
Abdullah;
Ahmed, Ibrar

Publication type:

Article

Human Genome Editing and Ethical Considerations.

Published in:

2016

By:

Krishan, Kewal;
Kanchan, Tanuj;
Singh, Bahadur

Publication type:

Letter

Enhancing CRISPR prime editing by reducing misfolded pegRNA interactions.

Published in:

eLife, 2024, p. 1

By:

Weiting Zhang;
Petri, Karl;
Junyan Ma;
Hyunho Lee;
Chia-Lun Tsai;
Joung, J. Keith;
Jing-Ruey Joanna Yeh

Publication type:

Article

Complete organelle genomes of Korean fir, Abies koreana and phylogenomics of the gymnosperm genus Abies using nuclear and cytoplasmic DNA sequence data.

Published in:

Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-58253-x

By:

Park, Seongjun;
Kwak, Myounghai;
Park, SeonJoo

Publication type:

Article

The first mitochondrial genome of Calophyllum soulattri Burm.f.

Published in:

Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-55016-6

By:

Cadorna, Charles Anthon E.;
Pahayo, Dexter G.;
Rey, Jessica D.

Publication type:

Article

Comparative analysis of chloroplast and mitochondrial genomes of sweet potato provides evidence of gene transfer.

Published in:

Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-55150-1

By:

Li, GuoLiang;
Zhang, Hong;
Lin, Zhaomiao;
Li, Huawei;
Xu, Guochun;
Xu, Yongqing;
Ji, Rongchang;
Luo, Wenbin;
Qiu, Yongxiang;
Qiu, Sixin;
Tang, Hao

Publication type:

Article