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RNA aptamers: promising tools in synthetic biology.
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- Automatisierungstechnik, 2024, v. 72, n. 7, p. 666, doi. 10.1515/auto-2024-0002
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- Article
Fluorescent riboswitch-controlled biosensors for the genome scale analysis of metabolic pathways.
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- Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-61980-w
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- Article
A nascent riboswitch helix orchestrates robust transcriptional regulation through signal integration.
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- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-48409-8
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- Article
Guanidine production by plant homoarginine-6-hydroxylases.
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- eLife, 2024, p. 1, doi. 10.7554/eLife.91458
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- Article
Compatibility of termination mechanisms in bacterial transcription with inference on eukaryotic models.
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- Biochemical Society Transactions, 2024, v. 52, n. 2, p. 887, doi. 10.1042/BST20231229
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- Article
RNA cis-regulators are important for Streptococcus pneumoniae in vivo success.
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- PLoS Genetics, 2024, v. 20, n. 3, p. 1, doi. 10.1371/journal.pgen.1011188
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- Article
Construction of Riboswitches for Screening Antibacterial Agents from Forest Plants.
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- Forests (19994907), 2024, v. 15, n. 2, p. 367, doi. 10.3390/f15020367
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- Article
AliNA – a deep learning program for RNA secondary structure prediction.
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- Molecular Informatics, 2023, v. 42, n. 12, p. 1, doi. 10.1002/minf.202300113
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- Article
Structural and dynamic mechanisms for coupled folding and tRNA recognition of a translational T-box riboswitch.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-43232-z
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- Article
Targeting FMN, TPP, SAM-I, and glmS Riboswitches with Chimeric Antisense Oligonucleotides for Completely Rational Antibacterial Drug Development.
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- Antibiotics (2079-6382), 2023, v. 12, n. 11, p. 1607, doi. 10.3390/antibiotics12111607
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- Article
Switchable Fluorescent Light‐Up Aptamers Based on Riboswitch Architectures.
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- Angewandte Chemie, 2023, v. 135, n. 41, p. 1, doi. 10.1002/ange.202302858
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- Article
Functional diversity of c-di-GMP receptors in prokaryotic and eukaryotic systems.
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- Cell Communication & Signaling, 2023, v. 21, n. 1, p. 1, doi. 10.1186/s12964-023-01263-5
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- Article
Direct observation of tRNA-chaperoned folding of a dynamic mRNA ensemble.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-41155-3
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- Article
Exploring l-isoleucine riboswitches for enhancing 4-hydroxyisoleucine production in Corynebacterium glutamicum.
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- Biotechnology Letters, 2023, v. 45, n. 9, p. 1169, doi. 10.1007/s10529-023-03407-6
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- Article
Riboswitches, from cognition to transformation.
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- Synthetic & Systems Biotechnology, 2023, v. 8, n. 3, p. 357, doi. 10.1016/j.synbio.2023.05.008
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- Article
Real-Time Assessment of Intracellular Metabolites in Single Cells through RNA-Based Sensors.
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- Biomolecules (2218-273X), 2023, v. 13, n. 5, p. 765, doi. 10.3390/biom13050765
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- Article
A computational approach for the identification of distant homologs of bacterial riboswitches based on inverse RNA folding.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad110
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- Article
Automated design of protein-binding riboswitches for sensing human biomarkers in a cell-free expression system.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-38098-0
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- Article
Observation of structural switch in nascent SAM-VI riboswitch during transcription at single-nucleotide and single-molecule resolution.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-38042-2
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- Article
Antisense-acting riboswitches: A poorly characterized yet important model of transcriptional regulation in prokaryotic organisms.
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- PLoS ONE, 2023, v. 17, n. 2, p. 1, doi. 10.1371/journal.pone.0281744
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- Article
C-di-AMP Is a Second Messenger in Corynebacterium glutamicum That Regulates Expression of a Cell Wall-Related Peptidase via a Riboswitch.
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- Microorganisms, 2023, v. 11, n. 2, p. 296, doi. 10.3390/microorganisms11020296
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- Article
versatile strategy for convenient circular bivalent functional nucleic acids construction.
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- National Science Review, 2023, v. 10, n. 2, p. 1, doi. 10.1093/nsr/nwac107
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- Article
Carba‐Sugar Analogs of Glucosamine‐6‐Phosphate: New Activators for the glmS Riboswitch.
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- Chemistry - A European Journal, 2023, v. 29, n. 3, p. 1, doi. 10.1002/chem.202202378
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- Article
Lithium-sensing riboswitch classes regulate expression of bacterial cation transporter genes.
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- Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-20695-6
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- Article
Bioinformatics and Genomic Analyses of the Suitability of Eight Riboswitches for Antibacterial Drug Targets.
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- Antibiotics (2079-6382), 2022, v. 11, n. 9, p. 1177, doi. 10.3390/antibiotics11091177
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- Article
A Riboswitch-Driven Era of New Antibacterials.
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- Antibiotics (2079-6382), 2022, v. 11, n. 9, p. 1243, doi. 10.3390/antibiotics11091243
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- Article
Gene rppA co-regulated by LRR, SigA, and CcpA mediates antibiotic resistance in Bacillus thuringiensis.
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- Applied Microbiology & Biotechnology, 2022, v. 106, n. 17, p. 5687, doi. 10.1007/s00253-022-12090-y
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- Article
Thiamine metabolism genes in diatoms are not regulated by thiamine despite the presence of predicted riboswitches.
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- New Phytologist, 2022, v. 235, n. 5, p. 1853, doi. 10.1111/nph.18296
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- Article
Evolution of transcriptional regulation of histidine metabolism in Gram-positive bacteria.
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- BMC Genomics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12864-022-08796-y
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- Article
Pseudomonas aeruginosa post‐translational responses to elevated c‐di‐GMP levels.
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- Molecular Microbiology, 2022, v. 117, n. 5, p. 1213, doi. 10.1111/mmi.14902
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- Article
PTT-quant: a new method for direct identification and absolute quantification of premature transcription termination events, following the example of bacterial riboswitches.
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- Applied Microbiology & Biotechnology, 2022, v. 106, n. 4, p. 1557, doi. 10.1007/s00253-022-11809-1
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- Article
Bacterial 2′-Deoxyguanosine Riboswitch Classes as Potential Targets for Antibiotics: A Structure and Dynamics Study.
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- International Journal of Molecular Sciences, 2022, v. 23, n. 4, p. 1925, doi. 10.3390/ijms23041925
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- Article
The Signaling Pathway That cGAMP Riboswitches Found: Analysis and Application of Riboswitches to Study cGAMP Signaling in Geobacter sulfurreducens.
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- International Journal of Molecular Sciences, 2022, v. 23, n. 3, p. 1183, doi. 10.3390/ijms23031183
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- Article
Incorporation of a FRET Pair into a Riboswitch RNA to Measure Mg 2+ Concentration and RNA Conformational Change in Cell.
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- International Journal of Molecular Sciences, 2022, v. 23, n. 3, p. 1493, doi. 10.3390/ijms23031493
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- Article
A small RNA that cooperatively senses two stacked metabolites in one pocket for gene control.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-021-27790-8
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- Article
Prediction of the RNA Tertiary Structure Based on a Random Sampling Strategy and Parallel Mechanism.
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- Frontiers in Genetics, 2022, v. 12, p. 1, doi. 10.3389/fgene.2021.813604
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- Article
Correction: Tickner, Z.J.; Farzan, M. Riboswitches for Controlled Expression of Therapeutic Transgenes Delivered by Adeno-Associated Viral Vectors. Pharmaceuticals 2021, 14 , 554.
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- 2021
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- Correction Notice
Attenuator LRR – a regulatory tool for modulating gene expression in Gram‐positive bacteria.
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- Microbial Biotechnology, 2021, v. 14, n. 6, p. 2538, doi. 10.1111/1751-7915.13797
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- Article
Regulation of polyphosphate glucokinase gene expression through cotranscriptional processing in Mycobacterium tuberculosis H37Rv.
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- Journal of Biochemistry, 2021, v. 170, n. 5, p. 593, doi. 10.1093/jb/mvab080
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- Article
Switching at the ribosome: riboswitches need rProteins as modulators to regulate translation.
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- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-25024-5
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- Article
Riboswitch Mechanisms: New Tricks for an Old Dog.
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- Biochemistry (00062979), 2021, v. 86, n. 8, p. 962, doi. 10.1134/S0006297921080071
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- Article
Riboswitch control of bacterial RNA stability.
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- Molecular Microbiology, 2021, v. 116, n. 2, p. 361, doi. 10.1111/mmi.14723
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- Article
Widespread bacterial utilization of guanidine as nitrogen source.
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- Molecular Microbiology, 2021, v. 116, n. 1, p. 200, doi. 10.1111/mmi.14702
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- Article
A Synthetic Riboswitch to Regulate Haloarchaeal Gene Expression.
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- Frontiers in Microbiology, 2021, v. 2021, p. 1, doi. 10.3389/fmicb.2021.696181
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- Article
The energy-spectrum of bicompatible sequences.
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- Algorithms for Molecular Biology, 2021, v. 16, n. 1, p. 1, doi. 10.1186/s13015-021-00187-4
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- Article
Riboswitches for Controlled Expression of Therapeutic Transgenes Delivered by Adeno-Associated Viral Vectors.
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- Pharmaceuticals (14248247), 2021, v. 14, n. 6, p. 554, doi. 10.3390/ph14060554
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- Publication type:
- Article
Genome analysis of Streptococcus salivarius subsp. thermophilus type strain ATCC 19258 and its comparison to equivalent strain NCTC 12958.
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- Archives of Microbiology, 2021, v. 203, n. 4, p. 1843, doi. 10.1007/s00203-020-02156-8
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- Article
Signal amplification and optimization of riboswitch-based hybrid inputs by modular and titratable toehold switches.
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- Journal of Biological Engineering, 2021, v. 15, n. 1, p. 1, doi. 10.1186/s13036-021-00261-w
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- Article
Classification of seed members of five riboswitch families as short sequences based on the features extracted by Block Location-Based Feature Extraction (BLBFE) method.
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- BioImpacts, 2021, v. 11, n. 2, p. 101, doi. 10.34172/bi.2021.17
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- Article
Aptamers, Riboswitches, and Ribozymes in S. cerevisiae Synthetic Biology.
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- Life (2075-1729), 2021, v. 11, n. 3, p. 248, doi. 10.3390/life11030248
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- Article