Works matching DE "RIBOSOMAL RNA genetics"

Results: 388

MLST revisited: the gene-by-gene approach to bacterial genomics.

Published in:

Nature Reviews Microbiology, 2013, v. 11, n. 10, p. 728, doi. 10.1038/nrmicro3093

By:

Maiden, Martin C. J.;
van Rensburg, Melissa J. Jansen;
Bray, James E.;
Earle, Sarah G.;
Ford, Suzanne A.;
Jolley, Keith A.;
McCarthy, Noel D.

Publication type:

Article

Bacterial community structure in High-Arctic snow and freshwater as revealed by pyrosequencing of 16S rRNA genes and cultivation.

Published in:

Polar Research, 2013, v. 32, n. 1, p. 1, doi. 10.3402/polar.v32i0.17390

By:

Møller, Annette K.;
Søborg, Ditte A.;
Abu Al-Soud, Waleed;
Sørensen, Søren J.;
Kroer, Niels

Publication type:

Article

Incidence and distribution of botryosphaeriaceous species in New Zealand vineyards.

Published in:

European Journal of Plant Pathology, 2012, v. 132, n. 4, p. 549, doi. 10.1007/s10658-011-9900-5

By:

Baskarathevan, Jeyaseelan;
Jaspers, Marlene;
Jones, E.;
Ridgway, Hayley

Publication type:

Article

Co-occurrence Networks Among Bacteria and Microbial Eukaryotes of Lake Baikal During a Spring Phytoplankton Bloom.

Published in:

Microbial Ecology, 2019, v. 77, n. 1, p. 96, doi. 10.1007/s00248-018-1212-2

By:

Mikhailov, Ivan S.;
Zakharova, Yulia R.;
Bukin, Yuri S.;
Galachyants, Yuri P.;
Petrova, Darya P.;
Sakirko, Maria V.;
Likhoshway, Yelena V.

Publication type:

Article

Diversity and Dynamics of "Candidatus Endobugula" and Other Symbiotic Bacteria in Chinese Populations of the Bryozoan, Bugula neritina.

Published in:

Microbial Ecology, 2019, v. 77, n. 1, p. 243, doi. 10.1007/s00248-018-1233-x

By:

Li, Hai;
Mishra, Mrinal;
Ding, Shaoxiong;
Miyamoto, Michael M.

Publication type:

Article

Diversity of Total Bacterial Communities and Chemoautotrophic Populations in Sulfur-Rich Sediments of Shallow-Water Hydrothermal Vents off Kueishan Island, Taiwan.

Published in:

Microbial Ecology, 2017, v. 73, n. 3, p. 571, doi. 10.1007/s00248-016-0898-2

By:

Wang, Li;
Cheung, Man;
Liu, Rulong;
Wong, Chong;
Kwan, Hoi;
Hwang, Jiang-Shiou

Publication type:

Article

Microbial Signatures of Cadaver Gravesoil During Decomposition.

Published in:

Microbial Ecology, 2016, v. 71, n. 3, p. 524, doi. 10.1007/s00248-015-0725-1

By:

Finley, Sheree;
Pechal, Jennifer;
Benbow, M.;
Robertson, B.;
Javan, Gulnaz

Publication type:

Article

Bacterial Community Structure of Autotrophic Denitrification Biocathode by 454 Pyrosequencing of the 16S rRNA Gene.

Published in:

Microbial Ecology, 2015, v. 69, n. 3, p. 492, doi. 10.1007/s00248-014-0492-4

By:

Xiao, Yong;
Zheng, Yue;
Wu, Song;
Yang, Zhao-Hui;
Zhao, Feng

Publication type:

Article

Spatiotemporal Analysis of Bacterial Diversity in Sediments of Sundarbans Using Parallel 16S rRNA Gene Tag Sequencing.

Published in:

Microbial Ecology, 2015, v. 69, n. 3, p. 500, doi. 10.1007/s00248-014-0498-y

By:

Basak, Pijush;
Majumder, Niladri;
Nag, Sudip;
Bhattacharyya, Anish;
Roy, Debojyoti;
Chakraborty, Arpita;
SenGupta, Sohan;
Roy, Arunava;
Mukherjee, Arghya;
Pattanayak, Rudradip;
Ghosh, Abhrajyoti;
Chattopadhyay, Dhrubajyoti;
Bhattacharyya, Maitree

Publication type:

Article

Profiling Bacterial Diversity and Taxonomic Composition on Speleothem Surfaces in Kartchner Caverns, AZ.

Published in:

Microbial Ecology, 2013, v. 65, n. 2, p. 371, doi. 10.1007/s00248-012-0143-6

By:

Ortiz, Marianyoly;
Neilson, Julia;
Nelson, William;
Legatzki, Antje;
Byrne, Andrea;
Yu, Yeisoo;
Wing, Rod;
Soderlund, Carol;
Pryor, Barry;
Pierson, Leland;
Maier, Raina

Publication type:

Article

Ectyoplasia ferox, an Experimentally Tractable Model for Vertical Microbial Transmission in Marine Sponges.

Published in:

Microbial Ecology, 2013, v. 65, n. 2, p. 462, doi. 10.1007/s00248-012-0142-7

By:

Gloeckner, Volker;
Lindquist, Niels;
Schmitt, Susanne;
Hentschel, Ute

Publication type:

Article

23S rRNA Gene-Based Enterococci Community Signatures in Lake Pontchartrain, Louisiana, USA, Following Urban Runoff Inputs After Hurricane Katrina.

Published in:

Microbial Ecology, 2013, v. 65, n. 2, p. 289, doi. 10.1007/s00248-012-0166-z

By:

Bae, Hee-Sung;
Hou, Aixin

Publication type:

Article

The distribution of phytoplankton in the Baltic Sea assessed by a prokaryotic 16S rRNA gene primer system.

Published in:

Journal of Plankton Research, 2018, v. 40, n. 3, p. 244, doi. 10.1093/plankt/fby008

By:

BENNKE, C. M.;
POLLEHNE, F.;
MÜLLER, A.;
HANSEN, R.;
KREIKEMEYER, B.;
LABRENZ, M.

Publication type:

Article

Phylogenetic diversity of eukaryotic marine microbial plankton on the Scotian Shelf Northwestern Atlantic Ocean.

Published in:

Journal of Plankton Research, 2014, v. 36, n. 2, p. 344, doi. 10.1093/plankt/fbt123

By:

Dasilva, Cindy R.;
Lovejoy, Connie;
Li, William K.W.

Publication type:

Article

Reconstructing 16S rRNA genes in metagenomic data.

Published in:

Bioinformatics, 2015, v. 31, n. 12, p. i35, doi. 10.1093/bioinformatics/btv231

By:

Cheng Yuan;
Jikai Lei;
Cole, James;
Yanni Sun

Publication type:

Article

Phylogeny-based classification of microbial communities.

Published in:

Bioinformatics, 2014, v. 30, n. 4, p. 449, doi. 10.1093/bioinformatics/btt700

By:

Tanaseichuk, Olga;
Borneman, James;
Jiang, Tao

Publication type:

Article

SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes.

Published in:

Bioinformatics, 2012, v. 28, n. 14, p. 1823, doi. 10.1093/bioinformatics/bts252

By:

Pruesse, Elmar;
Peplies, Jörg;
Glöckner, Frank Oliver

Publication type:

Article

Recent advances in genomic DNA sequencing of microbial species from single cells.

Published in:

Nature Reviews Genetics, 2014, v. 15, n. 9, p. 577, doi. 10.1038/nrg3785

By:

Lasken, Roger S.;
McLean, Jeffrey S.

Publication type:

Article

Detección Molecular de Fitoplasmas en Nopal Tunero (Opuntia ficus-indica) con Síntomas de Engrosamiento del Cladodio.

Published in:

Revista Mexicana de Fitopatología, 2012, v. 30, n. 1, p. 72

By:

Suaste Dzul, Alba;
Rojas Martínez, Reyna Isabel;
Zavaleta Mejía, Emma;
Pérez Brito, Daisy

Publication type:

Article

Bryozoans are returning home: recolonization of freshwater ecosystems inferred from phylogenetic relationships.

Published in:

Ecology & Evolution (20457758), 2015, v. 5, n. 2, p. 255, doi. 10.1002/ece3.1352

By:

Koletić, Nikola;
Novosel, Maja;
Rajević, Nives;
Franjević, Damjan

Publication type:

Article

Helicobacter Species Identified in Captive Sooty Mangabeys ( Cercocebus atys) with Metastatic Gastric Adenocarcinoma.

Published in:

Helicobacter, 2016, v. 21, n. 3, p. 175, doi. 10.1111/hel.12269

By:

Esmail, Michael Y.;
Bacon, Rebecca;
Swennes, Alton G.;
Feng, Yan;
Shen, Zeli;
Garcia, AnaPatricia;
Sharma, Prachi;
Cohen, Joyce;
Fox, James G.

Publication type:

Article

Statistical Optimization of Polyhydroxybutyrate Production by Bacillus Pumilus H9 Using Cow Dung as a Cheap Carbon Source by Response Surface Methodology.

Published in:

Journal of Polymers & the Environment, 2018, v. 26, n. 8, p. 3159, doi. 10.1007/s10924-018-1194-7

By:

Chandani Devi, Ningthoujam;
Mazumder, Pranab Behari;
Bhattacharjee, Amitabha

Publication type:

Article

Assessment of Bifidobacterium Species Using groEL Gene on the Basis of Illumina MiSeq High-Throughput Sequencing.

Published in:

Genes, 2017, v. 8, n. 11, p. 336, doi. 10.3390/genes8110336

By:

Lujun Hu;
Wenwei Lu;
Linlin Wang;
Mingluo Pan;
Hao Zhang;
Jianxin Zhao;
Wei Chen

Publication type:

Article

Isolation and identification of Paracoccus sp. FD3 and evaluation of its formaldehyde degradation kinetics.

Published in:

Biotechnology & Bioprocess Engineering, 2013, v. 18, n. 2, p. 300, doi. 10.1007/s12257-012-0449-8

By:

Zhao, Haoyu;
Geng, Yucong;
Fan, Jieyu;
Tao, Ke;
Hou, Taiping

Publication type:

Article

The conservation landscape of the human ribosomal RNA gene repeats.

Published in:

PLoS ONE, 2018, v. 13, n. 12, p. 1, doi. 10.1371/journal.pone.0207531

By:

Agrawal, Saumya;
Ganley, Austen R. D.

Publication type:

Article

Complete mitochondrial genome of Benthodytes marianensis (Holothuroidea: Elasipodida: Psychropotidae): Insight into deep sea adaptation in the sea cucumber.

Published in:

PLoS ONE, 2018, v. 13, n. 11, p. 1, doi. 10.1371/journal.pone.0208051

By:

Mu, Wendan;
Liu, Jun;
Zhang, Haibin

Publication type:

Article

Periodic change in coastal microbial community structure associated with submarine groundwater discharge and tidal fluctuation.

Published in:

Limnology & Oceanography, 2017, v. 62, n. 2, p. 437, doi. 10.1002/lno.10433

By:

Lee, Eunhee;
Shin, Doyun;
Hyun, Sung Pil;
Ko, Kyung ‐ Seok;
Moon, Hee Sun;
Koh, Dong ‐ Chan;
Ha, Kyoochul;
Kim, Byung ‐ Yong

Publication type:

Article

A new species of shrimp of the genus Urocaridella Borradaile, 1915 (Decapoda: Caridea: Palaemonidae) from Papua New Guinea.

Published in:

Journal of Crustacean Biology, 2018, v. 38, n. 2, p. 206, doi. 10.1093/jcbiol/rux113

By:

Prakash, Sanjeevi;
Baeza, J Antonio

Publication type:

Article

Seasonal dynamics of the bacterioplankton community in a large, shallow, highly dynamic freshwater lake.

Published in:

Canadian Journal of Microbiology, 2018, v. 64, n. 11, p. 786, doi. 10.1139/cjm-2018-0126

By:

Kong, Zhaoyu;
Kou, Wenbo;
Ma, Yantian;
Yu, Haotian;
Ge, Gang;
Wu, Lan

Publication type:

Article

Microbial diversity and community structure in agricultural soils suffering from 4 years of Pb contamination.

Published in:

Canadian Journal of Microbiology, 2018, v. 64, n. 5, p. 305, doi. 10.1139/cjm-2017-0278

By:

An, Fengqiu;
Diao, Zhan;
Lv, Jialong

Publication type:

Article

Microbial diversity, tolerance, and biodegradation potential of urban wetlands with different input regimes.

Published in:

Canadian Journal of Microbiology, 2012, v. 58, n. 7, p. 887, doi. 10.1139/w2012-066

By:

Gilbert, Nicolas;
Fulthorpe, Roberta;
Kirkwood, Andrea E.

Publication type:

Article

Porcine intestinal microbiota is shaped by diet composition based on rye or triticale.

Published in:

Journal of Applied Microbiology, 2017, v. 123, n. 6, p. 1571, doi. 10.1111/jam.13595

By:

Burbach, K.;
Strang, E.J.P.;
Mosenthin, R.;
Camarinha‐Silva, A.;
Seifert, J.

Publication type:

Article

In vitro assessment of the gastrointestinal tolerance and immunomodulatory function of Bacillus methylotrophicus isolated from a traditional Korean fermented soybean food.

Published in:

Journal of Applied Microbiology, 2015, v. 118, n. 3, p. 718, doi. 10.1111/jam.12719

By:

Sim, I.;
Koh, J.‐H.;
Kim, D.‐J.;
Gu, S.‐H.;
Park, A.;
Lim, Y.‐H.

Publication type:

Article

Comparative study on gastrointestinal microbiota of eight fish species with different feeding habits.

Published in:

Journal of Applied Microbiology, 2014, v. 117, n. 6, p. 1750, doi. 10.1111/jam.12663

By:

Li, J.;
Ni, J.;
Wang, C.;
Li, X.;
Wu, S.;
Zhang, T.;
Yu, Y.;
Yan, Q.

Publication type:

Article

Bacterial community dynamics during the early stages of biofilm formation in a chlorinated experimental drinking water distribution system: implications for drinking water discolouration.

Published in:

Journal of Applied Microbiology, 2014, v. 117, n. 1, p. 286, doi. 10.1111/jam.12516

By:

Douterelo, I.;
Sharpe, R.;
Boxall, J.

Publication type:

Article

Comparative analysis of Sanger and next generation sequencing methods for 16S rDNA analysis of post-mortem specimens.

Published in:

Australian Journal of Forensic Sciences, 2019, v. 51, n. 4, p. 426, doi. 10.1080/00450618.2017.1402957

By:

Cho, Yoonjung;
Lee, Min Ho;
Kim, Hyo Sook;
Park, Moonhee;
Kim, Min-Hee;
Kwon, Hansol;
Kim, Jong-Bae;
Lee, Yang Han;
Lee, Dong Sub

Publication type:

Article

Polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) for rapid diagnosis of neonatal sepsis.

Published in:

Indian Journal of Medical Research, 2016, v. 143, n. 1, p. 72, doi. 10.4103/0971-5916.178613

By:

Rohit, Anusha;
Maiti, Biswajit;
Shenoy, Shalini;
Karunasagar, Indrani

Publication type:

Article

Baicalein suppresses the viability of MG-63 osteosarcoma cells through inhibiting c-MYC expression via Wnt signaling pathway.

Published in:

Molecular & Cellular Biochemistry, 2015, v. 405, n. 1/2, p. 187, doi. 10.1007/s11010-015-2410-6

By:

He, Nengbin;
Zhang, Zhichang

Publication type:

Article

Family heritage.

Published in:

Nature Immunology, 2012, v. 13, n. 9, p. 816, doi. 10.1038/ni.2413

By:

Visan, Ioana

Publication type:

Article

Abrupt burial imparts persistent changes to the bacterial diversity of turbidite‐associated sediment profiles.

Published in:

Geobiology, 2018, v. 16, n. 2, p. 190, doi. 10.1111/gbi.12271

By:

Harrison, B. K.;
Myrbo, A.;
Flood, B. E.;
Bailey, J. V.

Publication type:

Article

Molecular species delimitation methods provide new insight into taxonomy of the endemic gammarid species flock from the ancient Lake Ohrid.

Published in:

Zoological Journal of the Linnean Society, 2017, v. 181, n. 2, p. 272

By:

GRABOWSKI, MICHAŁ;
WYSOCKA, ANNA;
MAMOS, TOMASZ

Publication type:

Article

Core members and differential abundance of chrysomelid microbiota in the life stages of Podontia affinis (Galerucinae) and adult Silana farinosa (Cassidinae, Coleoptera).

Published in:

Biodiversity Data Journal, 2022, p. 1, doi. 10.3897/BDJ.10.e87459

By:

Sze-Looi Song;
Hoi-Sen Yong;
Kah-Ooi Chua;
Eamsobhana, Praphathip;
Phaik-Eem Lim;
Kok-Gan Chan

Publication type:

Article

Anguilla huangi Teng, Lin, and Tzeng, 2009, is a junior synonym of Anguilla luzonensis Watanabe, Aoyama, and Tsukamoto, 2009.

Published in:

Fisheries Science, 2013, v. 79, n. 3, p. 375, doi. 10.1007/s12562-013-0620-y

By:

Watanabe, Shun;
Aoyama, Jun;
Hagihara, Seishi;
Ai, Bunpei;
Azanza, Rhodora;
Tsukamoto, Katsumi

Publication type:

Article

PHF6 regulates cell cycle progression by suppressing ribosomal RNA synthesis.

Published in:

Epigenetics & Chromatin, 2013, v. 6, n. Suppl 1, p. 1, doi. 10.1186/1756-8935-6-S1-P134

By:

Jiadong Wang;
Chung Leung, Justin Wai;
Zihua Gong;
Lin Feng;
Xiaobing Shi;
Junjie Chen

Publication type:

Article

Comparative analysis of gut microbiota of mosquito communities in central Illinois.

Published in:

PLoS Neglected Tropical Diseases, 2017, v. 11, n. 2, p. 1, doi. 10.1371/journal.pntd.0005377

By:

Muturi, Ephantus J.;
Ramirez, Jose L.;
Rooney, Alejandro P.;
Kim, Chang-Hyun

Publication type:

Article

16S Ribosomal Ribonucleic Acid Gene Polymerase Chain Reaction in the Diagnosis of Bloodstream Infections: A Systematic Review and Meta-Analysis.

Published in:

PLoS ONE, 2015, v. 10, n. 5, p. 1, doi. 10.1371/journal.pone.0127195

By:

Su, Guoming;
Fu, Zhuqing;
Hu, Liren;
Wang, Yueying;
Zhao, Zuguo;
Yang, Weiqing

Publication type:

Article

The Complete Mitochondrial Genome of the Geophilomorph Centipede Strigamia maritima.

Published in:

PLoS ONE, 2015, v. 10, n. 3, p. 1, doi. 10.1371/journal.pone.0121369

By:

Robertson, Helen E.;
Lapraz, François;
Rhodes, Adelaide C.;
Telford, Maximilian J.

Publication type:

Article

Recombination Drives Evolution of the Clostridium difficile 16S-23S rRNA Intergenic Spacer Region.

Published in:

PLoS ONE, 2014, v. 9, n. 9, p. 1, doi. 10.1371/journal.pone.0106545

By:

Janezic, Sandra;
Indra, Alexander;
Rattei, Thomas;
Weinmaier, Thomas;
Rupnik, Maja

Publication type:

Article

Changes in the Lung Microbiome following Lung Transplantation Include the Emergence of Two Distinct Pseudomonas Species with Distinct Clinical Associations.

Published in:

PLoS ONE, 2014, v. 9, n. 5, p. 1, doi. 10.1371/journal.pone.0097214

By:

Dickson, Robert P.;
Erb-Downward, John R.;
Freeman, Christine M.;
Walker, Natalie;
Scales, Brittan S.;
Beck, James M.;
Martinez, Fernando J.;
Curtis, Jeffrey L.;
Lama, Vibha N.;
Huffnagle, Gary B.

Publication type:

Article

SIMSISH Technique Does Not Alter the Apparent Isotopic Composition of Bacterial Cells.

Published in:

PLoS ONE, 2013, v. 8, n. 10, p. 1, doi. 10.1371/journal.pone.0077522

By:

Chapleur, Olivier;
Wu, Ting-Di;
Guerquin-Kern, Jean-Luc;
Mazéas, Laurent;
Bouchez, Théodore

Publication type:

Article