Works matching DE "RIBONUCLEASE H"

Results: 165

The bacterial transcription terminator, Rho, functions as an RNA:DNA hybrid (RDH) helicase in vivo.

Published in:

Biochemical Journal, 2025, v. 482, n. 11, p. 655, doi. 10.1042/BCJ20253089

By:

Bhosale, Ankita;
Sen, Ranjan

Publication type:

Article

The relevance of RNA–DNA interactions as regulators of physiological functions.

Published in:

Pflügers Archiv: European Journal of Physiology, 2025, v. 477, n. 7, p. 889, doi. 10.1007/s00424-025-03091-7

By:

Stötzel, Julia;
Warwick, Timothy;
Tirunagari, Praveenya;
Brandes, Ralf P.;
Leisegang, Matthias S.

Publication type:

Article

Evidence that processing of ribonucleotides in DNA by topoisomerase 1 is leading-strand specific.

Published in:

Nature Structural & Molecular Biology, 2015, v. 22, n. 4, p. 291, doi. 10.1038/nsmb.2989

By:

Williams, Jessica S;
Clausen, Anders R;
Lujan, Scott A;
Marjavaara, Lisette;
Clark, Alan B;
Burgers, Peter M;
Chabes, Andrei;
Kunkel, Thomas A

Publication type:

Article

Gapmer Antisense Oligonucleotides Containing 2′,3′‐Dideoxy‐2′‐fluoro‐3′‐C‐hydroxymethyl‐β‐d‐lyxofuranosyl Nucleotides Display Site‐Specific RNase H Cleavage and Induce Gene Silencing

Published in:

Chemistry - A European Journal, 2020, v. 26, n. 6, p. 1368, doi. 10.1002/chem.201904540

By:

Danielsen, Mathias B.;
Lou, Chenguang;
Lisowiec‐Wachnicka, Jolanta;
Pasternak, Anna;
Jørgensen, Per T.;
Wengel, Jesper

Publication type:

Article

Complete genome sequences of newly discovered Dioscorea bacilliform AL virus and Dioscorea bacilliform SN virus isolates from Dioscorea bulbifera L. in northeastern Brazil.

Published in:

European Journal of Plant Pathology, 2023, v. 166, n. 3, p. 353, doi. 10.1007/s10658-023-02667-2

By:

Santos, Giancarlo B. L.;
Ferro, Mayra M. M.;
Assunção, Iraildes P.;
Ramos-Sobrinho, Roberto;
Lima, Gaus S. A.

Publication type:

Article

Identification of 'Ca. Phytoplasma asteris', banana bunchy top virus and banana streak MY virus associated with Champa and Sabri banana cultivars in Tripura, a North Eastern state of India.

Published in:

European Journal of Plant Pathology, 2022, v. 163, n. 4, p. 907, doi. 10.1007/s10658-022-02528-4

By:

Mitra, Surabhi;
Debnath, Prasenjit;
Rai, Richa;
Srivastava, Nishant;
Rao, Govind Pratap;
Baranwal, Virendra Kumar

Publication type:

Article

Identification of new banana endogenous virus sequences highlights the hallmark gene encoded by retroviruses integrated in banana genomes.

Published in:

Phytopathology Research, 2024, v. 6, n. 1, p. 1, doi. 10.1186/s42483-024-00256-7

By:

Chen, Huazhou;
Li, Huaping;
Rao, Xueqin

Publication type:

Article

Ribonucleotide and R-Loop Damage in Plastid DNA and Mitochondrial DNA during Maize Development.

Published in:

Plants (2223-7747), 2023, v. 12, n. 17, p. 3161, doi. 10.3390/plants12173161

By:

Tripathi, Diwaker;
Oldenburg, Delene J.;
Bendich, Arnold J.

Publication type:

Article

Characterization of Divergent Grapevine Badnavirus 1 Isolates Found on Different Fig Species (Ficus spp.).

Published in:

Plants (2223-7747), 2022, v. 11, n. 19, p. 2532, doi. 10.3390/plants11192532

By:

Chirkov, Sergei;
Sheveleva, Anna;
Tsygankova, Svetlana;
Sharko, Fedor;
Mitrofanova, Irina

Publication type:

Article

In Vitro Anti-HIV-1 Reverse Transcriptase and Integrase Properties of Punica granatum L. Leaves, Bark, and Peel Extracts and Their Main Compounds.

Published in:

Plants (2223-7747), 2021, v. 10, n. 10, p. 2124, doi. 10.3390/plants10102124

By:

Sanna, Cinzia;
Marengo, Arianna;
Acquadro, Stefano;
Caredda, Alessia;
Lai, Roberta;
Corona, Angela;
Tramontano, Enzo;
Rubiolo, Patrizia;
Esposito, Francesca

Publication type:

Article

The catalytic mechanism, metal dependence, substrate specificity, and biodiversity of ribonuclease H.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.1034811

By:

Jing Pang;
Qinyu Guo;
Zheng Lu

Publication type:

Article

Efficient and specific DNA oligonucleotide rRNA probe-based rRNA removal in Talaromyces marneffei.

Published in:

Mycology: An International Journal on Fungal Biology, 2022, v. 13, n. 2, p. 106, doi. 10.1080/21501203.2021.2017045

By:

Hu, Xueyan;
Zhang, Yun;
Du, Minghao;
Yang, Ence

Publication type:

Article

The Potential Impact of Edible Fruit Extracts on Bacterial Nucleases in Preliminary Research—In Silico and In Vitro Insight.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 4, p. 1757, doi. 10.3390/ijms26041757

By:

Szeleszczuk, Łukasz;
Brożyna, Malwina;
Dudek, Bartłomiej;
Czarnecki, Marcin;
Junka, Adam;
Czerwińska, Monika E.

Publication type:

Article

An optimized protocol for microarray validation by quantitative PCR using amplified amino allyl labeled RNA.

Published in:

BMC Genomics, 2010, v. 11, n. 1, p. 1, doi. 10.1186/1471-2164-11-542

By:

Jeanty, Céline;
Longrois, Dan;
Mertes, Paul-Michel;
Wagner, Daniel R;
Devaux, Yvan

Publication type:

Article

2′β-Fluoro-Tricyclo Nucleic Acids (2′F-tc-ANA): Thermal Duplex Stability, Structural Studies, and RNase H Activation.

Published in:

Chemistry - A European Journal, 2017, v. 23, n. 43, p. 10310, doi. 10.1002/chem.201701476

By:

Istrate, Alena;
Katolik, Adam;
Istrate, Andrei;
Leumann, Christian J.

Publication type:

Article

Inside Back Cover: 2′β-Fluoro-Tricyclo Nucleic Acids (2′F-tc-ANA): Thermal Duplex Stability, Structural Studies, and RNase H Activation (Chem. Eur. J. 43/2017).

Published in:

Chemistry - A European Journal, 2017, v. 23, n. 43, p. 10480, doi. 10.1002/chem.201702636

By:

Istrate, Alena;
Katolik, Adam;
Istrate, Andrei;
Leumann, Christian J.

Publication type:

Article

The human TRAM1 locus expresses circular RNAs.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-01548-0

By:

Dubois, Josephine;
Sczakiel, Georg

Publication type:

Article

Genome-Wide Distribution of Nascent Transcripts in Sperm DNA, Products of a Late Wave of General Transcription.

Published in:

Cells (2073-4409), 2019, v. 8, n. 10, p. 1196, doi. 10.3390/cells8101196

By:

Kianmehr, Leila;
Khazali, Homayoun;
Rajabi-Maham, Hassan;
Sharifi-Zarchi, Ali;
Cuzin, François;
Rassoulzadegan, Minoo

Publication type:

Article

Gapmer Oligonucleotides: Sugar-Modified Wings to Antisense Therapeutics.

Published in:

Trends in Carbohydrate Research, 2015, v. 7, n. 3, p. 28

By:

Rungta, Pallavi;
Mangla, Priyanka;
Sharma, Vivek K.;
Singh, Sunil K.;
Chauhan, Aman;
Masram, Dhanraj T.;
Senapati, Nihar Nalini;
Prasad, Ashok K.

Publication type:

Article

Identification, characterization, and validation of NBS-encoding genes in grass pea.

Published in:

Frontiers in Genetics, 2023, p. 1, doi. 10.3389/fgene.2023.1187597

By:

Alsamman, Alsamman M.;
Mousa, Khaled H.;
Nassar, Ahmed E.;
Faheem, Mostafa M.;
Radwan, Khaled H.;
Adly, Monica H.;
Hussein, Ahmed;
Istanbuli, Tawffiq;
Mokhtar, Morad M.;
Elakkad, Tamer Ahmed;
Kehel, Zakaria;
Hamwieh, Aladdin;
Abdelsattar, Mohamed;
El Allali, Achraf

Publication type:

Article

Novel genetic variants of banana streak MY virus and banana streak IM virus naturally infecting banana in Northeast India.

Published in:

3 Biotech, 2024, v. 14, n. 11, p. 1, doi. 10.1007/s13205-024-04113-4

By:

Rai, Richa;
Anand, Yumlembam Rupert;
Monteshori, Sapam;
Diksha, Damini;
Dubey, Saurabh Kumar;
Baranwal, Virendra Kumar;
Sharma, Susheel Kumar

Publication type:

Article

RNase HI Is Essential for Survival of Mycobacterium smegmatis.

Published in:

PLoS ONE, 2015, v. 10, n. 5, p. 1, doi. 10.1371/journal.pone.0126260

By:

Minias, Alina E.;
Brzostek, Anna M.;
Korycka- Machala, Malgorzata;
Dziadek, Bozena;
Minias, Piotr;
Rajagopalan, Malini;
Madiraju, Murty;
Dziadek, Jaroslaw

Publication type:

Article

SiRNA-Induced Mutation in HIV-1 Polypurine Tract Region and Its Influence on Viral Fitness.

Published in:

PLoS ONE, 2015, v. 10, n. 4, p. 1, doi. 10.1371/journal.pone.0122953

By:

Rausch, Jason W.;
Tian, Meijuan;
Li, Yuejin;
Angelova, Lora;
Bagaya, Bernard S.;
Krebs, Kendall C.;
Qian, Feng;
Zhu, Chuanwu;
Arts, Eric J.;
Le Grice, Stuart F. J.;
Gao, Yong

Publication type:

Article

Autonomously Folding Protein Fragments Reveal Differences in the Energy Landscapes of Homologous RNases H.

Published in:

PLoS ONE, 2015, v. 10, n. 3, p. 1, doi. 10.1371/journal.pone.0119640

By:

Rosen, Laura E.;
Marqusee, Susan

Publication type:

Article

Antisense Oligonucleotides Capable of Promoting Specific Target mRNA Reduction via Competing RNase H1-Dependent and Independent Mechanisms.

Published in:

PLoS ONE, 2014, v. 9, n. 10, p. 1, doi. 10.1371/journal.pone.0108625

By:

Vickers, Timothy A.;
Crooke, Stanley T.

Publication type:

Article

Divalent Metal Ion-Induced Folding Mechanism of RNase H1 from Extreme Halophilic Archaeon Halobacterium sp. NRC-1.

Published in:

PLoS ONE, 2014, v. 9, n. 9, p. 1, doi. 10.1371/journal.pone.0109016

By:

Tannous, Elias;
Kanaya, Shigenori

Publication type:

Article

Inhibitor Ranking through QM Based Chelation Calculations for Virtual Screening of HIV-1 RNase H Inhibition.

Published in:

PLoS ONE, 2014, v. 9, n. 6, p. 1, doi. 10.1371/journal.pone.0098659

By:

Poongavanam, Vasanthanathan;
Steinmann, Casper;
Kongsted, Jacob

Publication type:

Article

Genetic diversity analysis reveals new badnaviruses infecting banana in South China.

Published in:

Journal of Plant Pathology, 2020, v. 102, n. 4, p. 1065, doi. 10.1007/s42161-020-00646-8

By:

Rao, Xue-Qin;
Wu, Zi-Lin;
Wang, Wan;
Zhou, Lin;
Sun, Jie;
Li, Hua-Ping

Publication type:

Article

Full sequencing of 100mer sgRNA via tandem mass spectrometry by targeted RNase H digestion with customized probes.

Published in:

Analytical & Bioanalytical Chemistry, 2025, v. 417, n. 8, p. 1497, doi. 10.1007/s00216-025-05737-y

By:

Gawlig, Christopher;
Hirschberger, Rebecca;
Hanci, Güngör;
Schott, Saskia;
Marandi, Shima;
Hesse, Ida Ronja;
Rühl, Michael

Publication type:

Article

Are there better assays to evaluate the risk of transmission of porcine endogenous retroviruses (PERVs) to human cells?

Published in:

Xenotransplantation, 2019, v. 26, n. 4, p. N.PAG, doi. 10.1111/xen.12510

By:

Denner, Joachim;
Scobie, Linda

Publication type:

Article

Polyadenylation ligation‐mediated sequencing (PALM‐Seq) characterizes cell‐free coding and non‐coding RNAs in human biofluids.

Published in:

Clinical & Translational Medicine, 2022, v. 12, n. 7, p. 1, doi. 10.1002/ctm2.987

By:

Liu, Zhongzhen;
Wang, Taifu;
Yang, Xi;
Zhou, Qing;
Zhu, Sujun;
Zeng, Juan;
Chen, Haixiao;
Sun, Jinghua;
Li, Liqiang;
Xu, Jinjin;
Geng, Chunyu;
Xu, Xun;
Wang, Jian;
Yang, Huanming;
Zhu, Shida;
Chen, Fang;
Wang, Wen‐Jing

Publication type:

Article

Functional Disassociation Between the Protein Domains of MSMEG_4305 of Mycolicibacterium smegmatis (Mycobacterium smegmatis) in vivo.

Published in:

Frontiers in Microbiology, 2020, v. 11, p. N.PAG, doi. 10.3389/fmicb.2020.02008

By:

Czubat, Bożena;
Minias, Alina;
Brzostek, Anna;
Żaczek, Anna;
Struś, Katarzyna;
Zakrzewska-Czerwińska, Jolanta;
Dziadek, Jarosław

Publication type:

Article

RNase H2 Loss in Murine Astrocytes Results in Cellular Defects Reminiscent of Nucleic Acid- Mediated Autoinflammation.

Published in:

Frontiers in Immunology, 2018, p. 1, doi. 10.3389/fimmu.2018.00587

By:

Bartsch, Kareen;
Damme, Markus;
Regen, Tommy;
Becker, Lore;
Garrett, Lillian;
Hölter, Sabine M;
Knittler, Katharina;
Borowski, Christopher;
Waisman, Ari;
Glatzel, Markus;
Fuchs, Helmut;
Gailus-Durner, Valerie;
Hrabe de Angelis, Martin;
Rabe, Björn

Publication type:

Article

Nukleozydo boranofosfoniany jako potencjalne środki terapeutyczne.

Published in:

Advances in Biochemistry / Postepy Biochemii, 2022, v. 68, n. 2, p. 142, doi. 10.18388/pb.2021_425

By:

Filipiak, Eliza;
Gołębiewska, Justyna

Publication type:

Article

Atomistic details of the molecular recognition of DNA-RNA hybrid duplex by ribonuclease H enzyme.

Published in:

Journal of Chemical Sciences, 2015, v. 127, n. 10, p. 1701, doi. 10.1007/s12039-015-0942-7

By:

SURESH, GORLE;
PRIYAKUMAR, U

Publication type:

Article

Stabilization of Moloney murine leukemia virus reverse transcriptase by site-directed mutagenesis of surface residue Val433.

Published in:

Bioscience, Biotechnology & Biochemistry, 2014, v. 78, n. 1, p. 75, doi. 10.1080/09168451.2014.877186

By:

Atsushi Konishi;
Xiaochen Ma;
Kiyoshi Yasukawa

Publication type:

Article

Flavonoids and Acid-Hydrolysis derivatives of Neo-Clerodane diterpenes from Teucrium flavum subsp. glaucum as inhibitors of the HIV-1 reverse transcriptase–associated RNase H function.

Published in:

Journal of Enzyme Inhibition & Medicinal Chemistry, 2021, v. 36, n. 1, p. 749, doi. 10.1080/14756366.2021.1887170

By:

Fois, Benedetta;
Corona, Angela;
Tramontano, Enzo;
Distinto, Simona;
Maccioni, Elias;
Meleddu, Rita;
Caboni, Pierluigi;
Floris, Costantino;
Cottiglia, Filippo

Publication type:

Article

Scaffold hopping and optimisation of 3',4'-dihydroxyphenyl- containing thienopyrimidinones: synthesis of quinazolinone derivatives as novel allosteric inhibitors of HIV-1 reverse transcriptase-associated ribonuclease H.

Published in:

Journal of Enzyme Inhibition & Medicinal Chemistry, 2020, v. 35, n. 1, p. 1953, doi. 10.1080/14756366.2020.1835884

By:

Tocco, Graziella;
Esposito, Francesca;
Caboni, Pierluigi;
Laus, Antonio;
Beutler, John A.;
Wilson, Jennifer A.;
Corona, Angela;
Le Grice, Stuart F. J.;
Tramontano, Enzo

Publication type:

Article

From cycloheptathiophene-3-carboxamide to oxazinone-based derivatives as allosteric HIV-1 ribonuclease H inhibitors.

Published in:

Journal of Enzyme Inhibition & Medicinal Chemistry, 2019, v. 34, n. 1, p. 55, doi. 10.1080/14756366.2018.1523901

By:

Massari, Serena;
Corona, Angela;
Distinto, Simona;
Desantis, Jenny;
Caredda, Alessia;
Sabatini, Stefano;
Manfroni, Giuseppe;
Felicetti, Tommaso;
Cecchetti, Violetta;
Pannecouque, Christophe;
Maccioni, Elias;
Tramontano, Enzo;
Tabarrini, Oriana

Publication type:

Article

Isatin thiazoline hybrids as dual inhibitors of HIV-1 reverse transcriptase.

Published in:

Journal of Enzyme Inhibition & Medicinal Chemistry, 2017, v. 32, n. 1, p. 130, doi. 10.1080/14756366.2016.1238366

By:

Meleddu, Rita;
Distinto, Simona;
Corona, Angela;
Tramontano, Enzo;
Bianco, Giulia;
Melis, Claudia;
Cottiglia, Filippo;
Maccioni, Elias

Publication type:

Article

Antiribonuclease H2 antibodies are an immune biomarker for systemic lupus erythematosus.

Published in:

Autoimmunity, 2017, v. 50, n. 4, p. 241, doi. 10.1080/08916934.2017.1329422

By:

Nozawa, Kazuhisa;
Doe, Kentaro;
Uomori, Kaori;
Sekigawa, Iwao;
Takasaki, Yoshinari;
Yamaji, Ken;
Tamura, Naoto

Publication type:

Article

Role of RNase H1 in DNA repair: removal of single ribonucleotide misincorporated into DNA in collaboration with RNase H2.

Published in:

Scientific Reports, 2015, p. 9969, doi. 10.1038/srep09969

By:

Tannous, Elias;
Kanaya, Eiko;
Kanaya, Shigenori

Publication type:

Article

Fluorescent Tricyclic Cytidine Analogues as Substrates for Retroviral Reverse Transcriptases.

Published in:

ChemPlusChem, 2020, v. 85, n. 5, p. 855, doi. 10.1002/cplu.202000140

By:

Turner, M. Benjamin;
Purse, Byron W.

Publication type:

Article

Isolation and characterisation of Ty1-copia retrotransposons from Pongamia pinnata.

Published in:

Trees: Structure & Function, 2019, v. 33, n. 6, p. 1559, doi. 10.1007/s00468-019-01878-7

By:

Shelke, Rahul G.;
Rangan, Latha

Publication type:

Article

First report of a putative new badnavirus in association with wisteria mosaic disease in Italy.

Published in:

New Disease Reports, 2025, v. 51, n. 1, p. 1, doi. 10.1002/ndr2.70023

By:

Morelli, M.;
D'Attoma, G.;
Saldarelli, P.;
Minafra, A.

Publication type:

Article

A Saccharomyces cerevisiae RNase H2 Interaction Network Functions To Suppress Genome Instability.

Published in:

Molecular & Cellular Biology, 2014, v. 34, n. 8, p. 1521, doi. 10.1128/MCB.00960-13

By:

Allen-Soltero, Stephanie;
Martinez, Sandra L.;
Putnam, Christopher D.;
Kolodner, Richard D.

Publication type:

Article

A DNA Origami‐Based Gene Editing System for Efficient Gene Therapy in Vivo.

Published in:

Angewandte Chemie, 2023, v. 135, n. 51, p. 1, doi. 10.1002/ange.202315093

By:

Tang, Wantao;
Tong, Ting;
Wang, Hong;
Lu, Xuehe;
Yang, Changping;
Wu, Yushuai;
Wang, Yuang;
Liu, Jianbing;
Ding, Baoquan

Publication type:

Article

Minimalist Design of Wireframe DNA Nanotubes: Tunable Geometry, Size, Chirality, and Dynamics.

Published in:

Angewandte Chemie, 2023, v. 135, n. 44, p. 1, doi. 10.1002/ange.202309869

By:

Luo, Xin;
Saliba, Daniel;
Yang, Tianxiao;
Gentile, Serena;
Mori, Keita;
Islas, Patricia;
Das, Trishalina;
Bagheri, Neda;
Porchetta, Alessandro;
Guarne, Alba;
Cosa, Gonzalo;
Sleiman, Hanadi F.

Publication type:

Article

Communication and Cross‐Regulation between Chemically Fueled Sender and Receiver Reaction Networks.

Published in:

Angewandte Chemie, 2023, v. 135, n. 2, p. 1, doi. 10.1002/ange.202214499

By:

Sun, Mo;
Deng, Jie;
Walther, Andreas

Publication type:

Article

Antisense Oligonucleotide (AS‐ODN) Technology: Principle, Mechanism and Challenges.

Published in:

Biotechnology & Applied Biochemistry, 2021, v. 68, n. 5, p. 1086, doi. 10.1002/bab.2028

By:

Gheibi‐Hayat, Seyed Mohammad;
Jamialahmadi, Khadijeh

Publication type:

Article