Works about REGULATOR genes

Results: 4791

Molecular Mimicry of Transposable Elements in Plants Open Access.

Published in:

Plant & Cell Physiology, 2025, v. 66, n. 4, p. 490, doi. 10.1093/pcp/pcae058

By:

Chu, Jie;
Newman, Josephine;
Cho, Jungnam

Publication type:

Article

Chromatin accessibility and transcriptomic profiles of sheep pituitary function associated with fecundity.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11621-x

By:

Li, Shanglai;
Zhao, Bingru;
Chen, Peiyong;
Cai, Yu;
Xu, Hui;
Yan, Chenbo;
Wang, Feng;
Zhang, Yanli

Publication type:

Article

ProTaxoVis—protein taxonomic visualisation of presence.

Published in:

BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06146-9

By:

Hsieh, Yin-Chen;
Bockwoldt, Mathias;
Heiland, Ines

Publication type:

Article

Value of Fatty Acid Metabolism-Related Genes as Individual Risk Prediction Model for Clear Cell Renal Cell Carcinoma.

Published in:

Biology Bulletin, 2025, v. 52, n. 2, p. 1, doi. 10.1134/S106235902461053X

By:

Tingting Gan;
Liu, Xing;
Wang, Haomin;
Wang, Wenbin

Publication type:

Article

Potential of rutin from Rhizophora mucronata leaves as a Inhibitor of Kelch-like ECH-associated protein 1/Nuclear factor erythroid 2 related factor 2 Keap1/Nrf2): An in silico study for Alzheimer's therapy.

Published in:

Journal of Advanced Pharmaceutical Technology & Research, 2025, v. 16, n. 2, p. 73, doi. 10.4103/JAPTR.JAPTR_313_24

By:

Saputri, Legis Ocktaviana;
Permatasari, Lina;
Harahap, Herpan Syafii;
Rosyidi, Rohadi Muhammad;
Rivarti, Arina Windri;
Prihatina, Lale Maulin;
Rahayu, Zilfia;
Azariani, Wiwin

Publication type:

Article

CLONAL SPREAD OF CARBAPENEM-RESISTANT KLEBSIELLA PNEUMONIAE.

Published in:

Romanian Archives of Microbiology & Immunology, 2024, v. 83, n. 2, p. 128

By:

SISU, Valentina-Daniela

Publication type:

Article

Pernicious Anemia in a Pediatric Patient With Autoimmune Polyendocrinopathy-Candidiasis-Ectodermal Dystrophy Open Access.

Published in:

2025

By:

Kokinakos, Konstandina;
Botwinick, Marissa;
Weidner, Melissa;
Drachtman, Richard

Publication type:

Case Study

Integrative genome-wide aberrant DNA methylation and transcriptome analysis identifies diagnostic markers for colorectal cancer.

Published in:

Archives of Toxicology, 2025, v. 99, n. 5, p. 2179, doi. 10.1007/s00204-025-03990-9

By:

Shen, Hengyang;
Wang, Zhenling;
Chen, Yang;
Huang, Changzhi;
Xu, Lei;
Tong, Ying;
Zhang, Hongqiang;
Lu, Yunfei;
Li, Shuwei;
Fu, Zan

Publication type:

Article

Generation and validation of a versatile inducible multiplex CRISPRi system to examine bacterial regulation in the Euprymna-Vibrio fischeri symbiosis.

Published in:

Archives of Microbiology, 2025, v. 207, n. 7, p. 1, doi. 10.1007/s00203-025-04354-8

By:

Pipes, Brian Lynn;
Nishiguchi, Michele Kiyoko

Publication type:

Article

Analysis of gene expression within individual cells reveals spatiotemporal patterns underlying Vibrio cholerae biofilm development.

Published in:

PLoS Biology, 2025, v. 23, n. 5, p. 1, doi. 10.1371/journal.pbio.3003187

By:

Johnson, Grace E.;
Fei, Chenyi;
Wingreen, Ned S.;
Bassler, Bonnie L.

Publication type:

Article

Effects of ER-phagy regulatory genes on the microenvironment of hepatocellular carcinoma: a comprehensive analysis.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02649-2

By:

Zhao, Rongchang;
Ding, Dan;
Bao, Minhui;
Ding, Yan;
Ding, Rongjie;
Liu, Jun;
Li, Yu;
Zhu, Chunrong

Publication type:

Article

Assessing the impact of sampling bias on node centralities in synthetic and biological networks.

Published in:

NPJ Systems Biology & Applications, 2025, v. 11, n. 1, p. 1, doi. 10.1038/s41540-025-00526-w

By:

Salehzadeh-Yazdi, Ali;
Hütt, Marc-Thorsten

Publication type:

Article

Mechanisms of Antitumor Activity of Low Doses of Radiation Associated with Activation of Cells' Defense System.

Published in:

Doklady Biochemistry & Biophysics, 2025, v. 520, n. 1, p. 96, doi. 10.1134/S160767292470128X

By:

Fomina, D. V.;
Rozhdestvensky, L. M.;
Raeva, N. F.;
Vorobeva, E. S.;
Zasukhina, G. D.

Publication type:

Article

MeRIP-Seq initially revealed the role of m6A modification in Chinese sacbrood virus-infected Apis cerana larvae.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1563240

By:

Liu, Yuming;
Bai, Hua;
Qiu, Huitong;
Fei, Dongliang;
Ma, Mingxiao

Publication type:

Article

Photoperiod and ambient temperature control flowering time of cultivated oat genotypes.

Published in:

Crop Breeding & Applied Biotechnology, 2025, v. 25, n. 1, p. 1, doi. 10.1590/1984-70332025v25n1a03

By:

Cristiano Nava, Itamar;
de Pierri Ubert, Itacir

Publication type:

Article

Potential mechanisms of epigenetic regulation in diabetic retinopathy from the perspectives of multi-omics.

Published in:

Diabetology & Metabolic Syndrome, 2025, v. 17, n. 1, p. 1, doi. 10.1186/s13098-025-01723-7

By:

Luo, Xin;
Xue, Daxi

Publication type:

Article

Integrated Transcriptomic Analysis of Liver and Muscle Tissues Reveals Candidate Genes and Pathways Regulating Intramuscular Fat Deposition in Beef Cattle.

Published in:

Animals (2076-2615), 2025, v. 15, n. 9, p. 1306, doi. 10.3390/ani15091306

By:

Wang, Siwei;
Liu, Tingting;
Peng, Peng;
Fu, Yurong;
Shi, Shaoqing;
Liang, Shuang;
Chen, Xi;
Wang, Kun;
Zhou, Rongyan

Publication type:

Article

High temporal-resolution transcriptome landscape reveals the biological process and regulatory genes of melanin deposition in breast muscle of Silkie chickens during embryonic development.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11654-2

By:

Yang, Xinting;
Ma, Bowen;
Zhao, Qingyu;
Jia, Yaxiong;
Meng, Qingshi;
Qin, Yuchang;
Tang, Chaohua;
Zhang, Junmin

Publication type:

Article

Mitigating PM<sub>2.5</sub> Induced Myocardial Metal Deposition Through Sodium Thiosulfate Resulted in Reduction of Cardiotoxicity and Physiological Recovery From Ischemia–Reperfusion via Mitochondrial Preservation.

Published in:

Environmental Toxicology, 2025, v. 40, n. 6, p. 912, doi. 10.1002/tox.24473

By:

Sivakumar, Bhavana;
Kurian, Gino A.

Publication type:

Article

Synergistic Antibacterial Mechanism of Benzyl Isothiocyanate and Resveratrol Against Staphylococcus aureus Revealed by Transcriptomic Analysis and Their Application in Beef.

Published in:

Foods, 2025, v. 14, n. 9, p. 1610, doi. 10.3390/foods14091610

By:

Liu, Jianan;
Ma, Jinle;
Wang, Yingrui;
Hao, Hongshun;
Bi, Jingran;
Hou, Hongman;
Zhang, Gongliang

Publication type:

Article

Transcriptomic Identification of Core Regulatory Genes for Higher Alcohol Production in Saccharomyces cerevisiae at Different Sugar Concentrations in Wine Fermentation.

Published in:

Foods, 2025, v. 14, n. 9, p. 1476, doi. 10.3390/foods14091476

By:

Chen, Lu;
Ren, Xiaona;
Wang, Yanan;
Hao, Dongshu;
Liang, Yanying;
Qin, Yi

Publication type:

Article

Combining Network Pharmacological Analysis and Animal Experiments to Explore the Pharmacological Mechanism of Zhangyanming Tablets in Diabetic Retinopathy.

Published in:

Diabetes, Metabolic Syndrome & Obesity: Targets & Therapy, 2025, v. 18, p. 1323, doi. 10.2147/DMSO.S495286

By:

Yang, Mengmeng;
Liu, Hualin;
Zhou, Jiewen;
Wang, Kewei;
Sun, Yujing;
Ning, Na;
Huang, Qiuling;
Hu, Jiajia;
Liu, Jidong;
Yan, Fei;
Hou, Xinguo;
Chen, Li;
Wang, Lingshu;
Liu, Fuqiang

Publication type:

Article

The final proteolytic step in transmembrane signaling of multiple RsgI anti-s factors in Clostridium thermocellum.

Published in:

Bioscience Reports, 2025, v. 45, n. 4, p. 233, doi. 10.1042/BSR20253055

By:

Wen Wen;
Chao Chen;
Qiu Cui;
Jinsong Xuan;
Yingang Feng

Publication type:

Article

Omics Study of Ovarian Malignancies: From Urine Metabolomic Profile to Minimally Invasive MicroRNA Markers.

Published in:

Molecular Biology, 2025, v. 59, n. 1, p. 69, doi. 10.1134/S0026893324700729

By:

Kutilin, D. S.;
Guskova, O. N.;
Filippov, F. E.;
Maksimov, A. Yu.

Publication type:

Article

The emerging roles and mechanisms of FAM83H‑AS1 in cancer: Pathophysiology and therapeutic implications (Review).

Published in:

Oncology Letters, 2025, v. 29, n. 6, p. N.PAG, doi. 10.3892/ol.2025.15016

By:

Shi, Jin-Long;
Lin, Chen-Shi;
Gong, Ming-Hui;
Cai, Zhi-Qiang

Publication type:

Article

Computational modeling of cancer cell metabolism along the catabolic-anabolic axes.

Published in:

NPJ Systems Biology & Applications, 2025, v. 11, n. 1, p. 1, doi. 10.1038/s41540-025-00525-x

By:

Villela-Castrejon, Javier;
Levine, Herbert;
Kaipparettu, Benny A.;
Onuchic, José N.;
George, Jason T.;
Jia, Dongya

Publication type:

Article

MYB47 delays leaf senescence by modulating jasmonate pathway via direct regulation of CYP94B3/CYP94C1 expression in Arabidopsis.

Published in:

New Phytologist, 2025, v. 246, n. 5, p. 2192, doi. 10.1111/nph.70133

By:

Cao, Jie;
Yang, Qi;
Zhao, Yaning;
Tan, Shuya;
Li, Shichun;
Cheng, Dawei;
Zhang, Ruxue;
Zhang, Murao;
Li, Zhonghai

Publication type:

Article

Gene regulatory network analysis of silver birch reveals the ancestral state of secondary cell wall biosynthesis in core eudicots.

Published in:

New Phytologist, 2025, v. 246, n. 5, p. 2059, doi. 10.1111/nph.70126

By:

Ilievska, Maja;
Chong, Sun‐Li;
Lim, Kean‐Jin;
Immanen, Juha;
Nieminen, Kaisa;
Maaheimo, Hannu;
Helariutta, Yrjö;
Wurman‐Rodrich, Joel;
Dupree, Paul;
Ord, James;
Tenkanen, Maija;
Salojärvi, Jarkko

Publication type:

Article

Regulation of chlorophyll and carotenoid metabolism in citrus fruit.

Published in:

Horticulture Plant Journal, 2025, v. 11, n. 3, p. 951, doi. 10.1016/j.hpj.2024.02.004

By:

Yingxiao Lu;
Xinchen Shen;
Yuche Li;
Yanna Xu;
Yuhan Chen;
Yishan Chen;
Xiaoli Hu;
Xiaolong Li;
Xuepeng Sun;
Jinli Gong

Publication type:

Article

BMAL1 is a Critical Regulator of Sex-Specific Gene Expression in the Heart.

Published in:

Function, 2025, v. 6, n. 1, p. 1, doi. 10.1093/function/zqaf004

By:

Dierickx, Pieterjan

Publication type:

Article

棉花野生种质资源的育种应用研究与前景.

Published in:

Biotechnology Bulletin, 2025, v. 41, n. 4, p. 21, doi. 10.13560/j.cnki.biotech.bull.1985.2024-0890

By:

牛若宇;
高瞻;
熊显鹏;
祝德;
罗皓天;
马学远;
胡冠菁

Publication type:

Article

Differentially Expressed Genes (DEGs) in Umbelliferone (UMB) Producing Endophytic Fusarium oxysporum (ZzEF8) Following Epigenetic Modification.

Published in:

Journal of Basic Microbiology, 2025, v. 65, n. 5, p. 1, doi. 10.1002/jobm.202400582

By:

Nair, Aswati Ravindrananthan;
Kaniyala, Harshitha;
Vardhan, Mudumbi Harsha;
Pillai, Padmesh

Publication type:

Article

Pilot study using a discrete mathematical approach for topological analysis and ssGSEA of gene expression in autosomal recessive polycystic kidney disease.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-99048-y

By:

Okui, Nobuo;
Hachiya, Tsuyoshi;
Horie, Shigeo

Publication type:

Article

Identification of potential anti aging drugs and targets in chronic kidney disease.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-96985-6

By:

Zhang, Qian;
Bai, Bing;
Ran, Lidan;
Zhang, Wei

Publication type:

Article

Whole-genome sequencing and key Cr(VI) reduction genes analysis of Klebsiella spp. Shm-1.

Published in:

Journal of Biotech Research, 2024, v. 19, p. 114

By:

Hongmei Sun;
Guangchuan Shi;
Ye Tao;
Zhaoyang Wei;
Yihan Wang;
Changli Liang;
Shilin Tian;
Enzhong Li;
Junhe Liu;
Chaoying Liu;
Lianbin Cao

Publication type:

Article

Multifaceted Evolution of the PhoPQ Two‐Component System in Salmonella enterica Enhanced the Expression of Horizontally Acquired Virulence Genes.

Published in:

Molecular Microbiology, 2025, v. 123, n. 5, p. 464, doi. 10.1111/mmi.15355

By:

Barretto, Luke A. F.;
Fowler, Casey C.

Publication type:

Article

Recent advances on gene-related DNA methylation in cancer diagnosis, prognosis, and treatment: a clinical perspective.

Published in:

Clinical Epigenetics, 2025, v. 17, n. 1, p. 1, doi. 10.1186/s13148-025-01884-2

By:

Lavoro, Alessandro;
Ricci, Daria;
Gattuso, Giuseppe;
Longo, Federica;
Spoto, Graziana;
Vitale, Anastasia Cristina Venera;
Giuliana, Maria Chiara;
Falzone, Luca;
Libra, Massimo;
Candido, Saverio

Publication type:

Article

Understanding the Molecular Mechanisms of Nitrogen Assimilation in C<sub>3</sub> Plants under Abiotic Stress: A Mini Review.

Published in:

Phyton (0031-9457), 2025, v. 94, n. 4, p. 1029, doi. 10.32604/phyton.2025.064608

By:

Ullah, Saif;
Ali, Izhar

Publication type:

Article

FactVAE: a factorized variational autoencoder for single-cell multi-omics data integration analysis.

Published in:

Briefings in Bioinformatics, 2025, v. 26, n. 2, p. 1, doi. 10.1093/bib/bbaf157

By:

Wang, Linjie;
Zhang, Huixia;
Yi, Bo;
Xie, Weidong;
Yu, Kun;
Li, Wei;
Li, Keqin;
Zhao, Dazhe

Publication type:

Article

AttentionGRN: a functional and directed graph transformer for gene regulatory network reconstruction from scRNA-seq data.

Published in:

Briefings in Bioinformatics, 2025, v. 26, n. 2, p. 1, doi. 10.1093/bib/bbaf118

By:

Gao, Zhen;
Su, Yansen;
Tang, Jin;
Jin, Huaiwan;
Ding, Yun;
Cao, Rui-Fen;
Wei, Pi-Jing;
Zheng, Chun-Hou

Publication type:

Article

MOSim: bulk and single-cell multilayer regulatory network simulator.

Published in:

Briefings in Bioinformatics, 2025, v. 26, n. 2, p. 1, doi. 10.1093/bib/bbaf110

By:

Monzó, Carolina;
Aguerralde-Martin, Maider;
Martínez-Mira, Carlos;
Arzalluz-Luque, Ángeles;
Conesa, Ana;
Tarazona, Sonia

Publication type:

Article

Inferring gene regulatory networks from time-series scRNA-seq data via GRANGER causal recurrent autoencoders.

Published in:

Briefings in Bioinformatics, 2025, v. 26, n. 2, p. 1, doi. 10.1093/bib/bbaf089

By:

Chen, Liang;
Dautle, Madison;
Gao, Ruoying;
Zhang, Shaoqiang;
Chen, Yong

Publication type:

Article

Identification and validation of susceptibility modules and hub genes of adrenocortical carcinoma through WGCNA and machine learning.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02396-4

By:

Yang, Yaoming;
Wang, Xinbao;
Wu, Liuqing;
Zhao, Shihua;
Chen, Ran;
Yu, Guoyong

Publication type:

Article

Evolutionary Process Underlying Receptor Gene Expansion and Cellular Divergence of Olfactory Sensory Neurons in Honeybees.

Published in:

Molecular Biology & Evolution, 2025, v. 42, n. 4, p. 1, doi. 10.1093/molbev/msaf080

By:

Zhang, Weixing;
Nie, Yage;
Xu, Tao;
Li, Yiheng;
Xu, Yicong;
Chen, Xiaoyong;
Shi, Peiyu;
Liu, Fang;
Zhao, Hongxia;
Ma, Qing;
Xu, Jin

Publication type:

Article

Gene-by-environment Interactions and Adaptive Body Size Variation in Mice From the Americas.

Published in:

Molecular Biology & Evolution, 2025, v. 42, n. 4, p. 1, doi. 10.1093/molbev/msaf078

By:

Mack, Katya L;
Landino, Nico P;
Tertyshnaia, Mariia;
Longo, Tiffany C;
Vera, Sebastian A;
Crew, Lilia A;
McDonald, Kristi;
Phifer-Rixey, Megan

Publication type:

Article

Longing for Longifolias.

Published in:

African Violet Magazine, 2015, v. 68, n. 4, p. 54

By:

Beheshti, Sayeh D.

Publication type:

Article

Body plan evolvability: The role of variability in gene regulatory networks.

Published in:

Journal of Bioinformatics & Computational Biology, 2024, v. 22, n. 3, p. 1, doi. 10.1142/S0219720024500112

By:

Spirov, Alexander V.;
Myasnikova, Ekaterina M.;
Holloway, David M.

Publication type:

Article

Network motif-based analysis of regulatory patterns in paralogous gene pairs.

Published in:

Journal of Bioinformatics & Computational Biology, 2020, v. 18, n. 3, p. N.PAG, doi. 10.1142/S0219720020400089

By:

Melkus, Gatis;
Rucevskis, Peteris;
Celms, Edgars;
Čerāns, Kārlis;
Freivalds, Karlis;
Kikusts, Paulis;
Lace, Lelde;
Opmanis, Mārtiņš;
Rituma, Darta;
Viksna, Juris

Publication type:

Article

Integration of multi-omics data to mine cancer-related gene modules.

Published in:

Journal of Bioinformatics & Computational Biology, 2019, v. 17, n. 6, p. N.PAG, doi. 10.1142/S0219720019500380

By:

Li, Peng;
Guo, Maozu;
Sun, Bo

Publication type:

Article

Recent Advances in DNA‐Based Nanoprobes for In vivo MiRNA Imaging.

Published in:

Chemistry - A European Journal, 2024, v. 30, n. 66, p. 1, doi. 10.1002/chem.202402566

By:

Wang, Caixia;
Song, Xuefang;
Shen, Jieyu;
Xie, Yuxin;
Ju, Huangxian;
Liu, Ying

Publication type:

Article