Works matching DE "PSEUDOGENES"

Results: 619

Pseudogene BNIP3P1 Regulates H. pylori–Induced Apoptosis in Gastric Mucosal by Acting on the miR‐411‐5p/BNIP3 Axis.

Published in:

Cellular Microbiology, 2025, v. 2025, p. 1, doi. 10.1155/cmi/6763794

By:

Zhang, Andong;
Yan, Xin;
Li, Ningzhe;
Yan, Shiying;
Li, Shu;
Yang, Hua;
Liu, Yimeng;
Zhang, Jian;
Wang, Jia;
Zhao, Jian;
Cao, Mei;
Chattopadhyay, Anirudha

Publication type:

Article

Genetic diversity and species delimitation of the zeorin-containing red-fruited Cladonia species (lichenized Ascomycota) assessed with ITS rDNA and β-tubulin data.

Published in:

Lichenologist, 2013, v. 45, n. 5, p. 665, doi. 10.1017/S0024282913000297

By:

STEINOVÁ, Jana;
STENROOS, Soili;
GRUBE, Martin;
ŠKALOUD, Pavel

Publication type:

Article

Reply to: Technical specificities of the study of the mitochondrial genome.

Published in:

2023

By:

Martínez-Moro, Álvaro;
Lamas-Toranzo, Ismael;
González-Brusi, Leopoldo;
Pérez-Gómez, Alba;
Padilla-Ruiz, Ester;
García-Blanco, Javier;
Bermejo-Álvarez, Pablo

Publication type:

Letter to the Editor

Tracking the footsteps of Burkholderia mallei: determination of the molecular differences and potential resistance genes.

Published in:

Turkish Journal of Medical Sciences, 2024, v. 54, n. 1, p. 16, doi. 10.55730/1300-0144.5761

By:

DÜLGER, Dilek;
EKİCİ, Seda;
DEMİRCİ, Mehmet;
YİĞİN, Akın;
BABACAN, Orkun

Publication type:

Article

Identification of GA2ox Family Genes and Expression Analysis under Gibberellin Treatment in Pineapple (Ananas comosus (L.) Merr.).

Published in:

Plants (2223-7747), 2023, v. 12, n. 14, p. 2673, doi. 10.3390/plants12142673

By:

Zhu, Wenhui;
Qi, Jingang;
Chen, Jingdong;
Ma, Suzhuo;
Liu, Kaichuang;
Su, Han;
Chai, Mengnan;
Huang, Youmei;
Xi, Xinpeng;
Cao, Zhuangyuan;
Qin, Yuan;
Cai, Hanyang

Publication type:

Article

ZmDREB2.9 Gene in Maize (Zea mays L.): Genome-Wide Identification, Characterization, Expression, and Stress Response.

Published in:

Plants (2223-7747), 2022, v. 11, n. 22, p. 3060, doi. 10.3390/plants11223060

By:

Filyushin, Mikhail A.;
Kochieva, Elena Z.;
Shchennikova, Anna V.

Publication type:

Article

Complete Chloroplast Genome of Rhipsalis baccifera, the only Cactus with Natural Distribution in the Old World: Genome Rearrangement, Intron Gain and Loss, and Implications for Phylogenetic Studies.

Published in:

Plants (2223-7747), 2020, v. 9, n. 8, p. 979, doi. 10.3390/plants9080979

By:

Oulo, Millicent Akinyi;
Yang, Jia-Xin;
Dong, Xiang;
Wanga, Vincent Okelo;
Mkala, Elijah Mbandi;
Munyao, Jacinta Ndunge;
Onjolo, Victor Omondi;
Rono, Peninah Cheptoo;
Hu, Guang-Wan;
Wang, Qing-Feng

Publication type:

Article

Complete Chloroplast Genome of Paphiopedilum delenatii and Phylogenetic Relationships among Orchidaceae.

Published in:

Plants (2223-7747), 2020, v. 9, n. 1, p. 1, doi. 10.3390/plants9010061

By:

Huyen-Trang Vu;
Ngan Tran;
Thanh-Diem Nguyen;
Quoc-Luan Vu;
My-Huyen Bui;
Minh-Tri Le;
Ly Le

Publication type:

Article

Developing Chloroplast Genomic Resources from 25 Avena Species for the Characterization of Oat Wild Relative Germplasm.

Published in:

Plants (2223-7747), 2019, v. 8, n. 11, p. 438, doi. 10.3390/plants8110438

By:

Fu, Yong-Bi;
Li, Pingchuan;
Biligetu, Bill

Publication type:

Article

Inferring pseudogene–MiRNA associations based on an ensemble learning framework with similarity kernel fusion.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-36054-y

By:

Fan, Chunyan;
Ding, Mingchao

Publication type:

Article

The complete genome sequence of the yogurt isolate Streptococcus thermophilus ACA-DC 2.

Published in:

Standards in Genomic Sciences, 2017, v. 12, p. 1, doi. 10.1186/s40793-017-0227-5

By:

Alexandraki, Voula;
Kazou, Maria;
Blom, Jochen;
Pot, Bruno;
Tsakalidou, Effie;
Papadimitriou, Konstantinos

Publication type:

Article

First high quality draft genome sequence of a plant growth promoting and cold active enzyme producing psychrotrophic Arthrobacter agilis strain L77.

Published in:

Standards in Genomic Sciences, 2016, v. 11, p. 1, doi. 10.1186/s40793-016-0176-4

By:

Singh, Ram N.;
Gaba, Sonam;
Yadav, Ajar N.;
Gaur, Prakhar;
Gulati, Sneha;
Kaushik, Rajeev;
Saxena, Anil K.

Publication type:

Article

Characterization of complex structural variation in the CYP2D6-CYP2D7-CYP2D8 gene loci using single-molecule long-read sequencing.

Published in:

Frontiers in Pharmacology, 2023, p. 1, doi. 10.3389/fphar.2023.1195778

By:

Turner, Amy J.;
Derezinski, Ashley D.;
Gaedigk, Andrea;
Berres, Mark E.;
Gregornik, David B.;
Brown, Keith;
Broeckel, Ulrich;
Scharer, Gunter

Publication type:

Article

Properties of Modestobacter deserti sp. nov., a Kind of Novel Phosphate-Solubilizing Actinobacteria Inhabited in the Desert Biological Soil Crusts.

Published in:

Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.742798

By:

Jiang, Zhu-Ming;
Zhang, Bing-Huo;
Sun, Hong-Min;
Zhang, Tao;
Yu, Li-Yan;
Zhang, Yu-Qin

Publication type:

Article

The Marine Mammal Class II Major Histocompatibility Complex Organization.

Published in:

Frontiers in Immunology, 2019, p. N.PAG, doi. 10.3389/fimmu.2019.00696

By:

Sá, André Luiz Alves de;
Breaux, Breanna;
Burlamaqui, Tibério Cesar Tortola;
Deiss, Thaddeus Charles;
Sena, Leonardo;
Criscitiello, Michael Frederick;
Schneider, Maria Paula Cruz

Publication type:

Article

Typhoidal Salmonella: Distinctive virulence factors and pathogenesis.

Published in:

Cellular Microbiology, 2018, v. 20, n. 9, p. 1, doi. 10.1111/cmi.12939

By:

Johnson, Rebecca;
Mylona, Elli;
Frankel, Gad

Publication type:

Article

Loop-mediated isothermal amplification of Neisseria gonorrhoeae porA pseudogene: a rapid and reliable method to detect gonorrhea.

Published in:

AMB Express, 2017, v. 7, n. 1, p. 1, doi. 10.1186/s13568-017-0349-6

By:

Liu, Mei-Ling;
Xia, Yong;
Wu, Xing-Zhong;
Huang, Jian-Qiong;
Guo, Xu-Guang

Publication type:

Article

Pseudogene product YqiG is important for pflB expression and biohydrogen production in Escherichia coli BW25113.

Published in:

3 Biotech, 2018, v. 8, n. 10, p. 1, doi. 10.1007/s13205-018-1461-2

By:

Zakaria, Muhammad Azman;
Mohd Yusoff, Mohd Zulkhairi;
Zakaria, Mohd Rafein;
Hassan, Mohd Ali;
Wood, Thomas K.;
Maeda, Toshinari

Publication type:

Article

The OCT4 pseudogene POU5F1B is amplified and promotes an aggressive phenotype in gastric cancer.

Published in:

Oncogene, 2015, v. 34, n. 2, p. 199, doi. 10.1038/onc.2013.547

By:

Hayashi, H;
Arao, T;
Togashi, Y;
Kato, H;
Fujita, Y;
De Velasco, M A;
Kimura, H;
Matsumoto, K;
Tanaka, K;
Okamoto, I;
Ito, A;
Yamada, Y;
Nakagawa, K;
Nishio, K

Publication type:

Article

Isolation of Candida rugosa lipase isoforms.

Published in:

Chemical Industry / Hemijska Industrija, 2013, v. 67, n. 5, p. 703, doi. 10.2298/HEMIND120828113T

By:

Trbojević, Jovana N.;
Dimitrijević, Aleksandra S.;
Veličković, Dušan V.;
Gavrović-Jankulović, Marija;
Milosavić, Nenad B.

Publication type:

Article

Clinical Manifestations and Gene Expression in Patients with Conventional Papillary Thyroid Carcinoma Carrying the BRAF<sup>V600E</sup> Mutation and BRAF Pseudogene.

Published in:

Thyroid, 2016, v. 26, n. 5, p. 691, doi. 10.1089/thy.2015.0044

By:

Jiunn-Diann Lin;
Shuai-Shuai Fu;
Jui-Yu Chen;
Chen-Hsen Lee;
Wing-Keung Chau;
Chao-Wen Cheng;
Yuan-Hung Wang;
Yuh-Feng Lin;
Wen-Fang Fang;
Kam-Tsun Tang

Publication type:

Article

Dispersal from the Qinghai-Tibet plateau by a high-altitude butterfly is associated with rapid expansion and reorganization of its genome.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-44023-2

By:

Zhao, Youjie;
Su, Chengyong;
He, Bo;
Nie, Ruie;
Wang, Yunliang;
Ma, Junye;
Song, Jingyu;
Yang, Qun;
Hao, Jiasheng

Publication type:

Article

Olfaction and Space in the Theatre.

Published in:

British Journal of Aesthetics, 2018, v. 58, n. 2, p. 131, doi. 10.1093/aesthj/ayy002

By:

Feagin, Susan L.

Publication type:

Article

Right ventricular long noncoding RNA expression in human heart failure.

Published in:

Pulmonary Circulation, 2015, v. 5, n. 1, p. 135, doi. 10.1086/679721

By:

Di Salvo, Thomas G.;
Yan Guo;
Yan Ru Su;
Clark, Travis;
Brittain, Evan;
Absi, Tarek;
Maltais, Simon;
Hemnes, Anna

Publication type:

Article

Thioester-containing proteins: At the crossroads of immune effector mechanisms.

Published in:

Virulence, 2017, v. 8, n. 8, p. 1468, doi. 10.1080/21505594.2017.1355662

By:

Theopold, Ulrich;
Schmid, Martin

Publication type:

Article

Killer Cell Immunoglobulin-Like Receptor Genes Distribution in Southeastern Anatolia Population in Turkey.

Published in:

Biology Bulletin, 2023, v. 50, p. S317, doi. 10.1134/S1062359022602439

By:

Mihcioglu, D.;
Gerceker, F. Ozbas;
Tufioglu, E.;
Yilmaz, T.

Publication type:

Article

Insights into the evolution of the eucalypt CER1 and CER3 genes involved in the synthesis of alkane waxes.

Published in:

Tree Genetics & Genomes, 2024, v. 20, n. 1, p. 1, doi. 10.1007/s11295-023-01637-3

By:

Hernández, Mariano A.;
Vaillancourt, René E.;
Potts, Brad M.;
Butler, Jakob B.

Publication type:

Article

Comparative and phylogenetic analysis based on chloroplast genome of Heteroplexis (Compositae), a protected rare genus.

Published in:

BMC Plant Biology, 2022, v. 22, p. 1, doi. 10.1186/s12870-022-04000-1

By:

Duan, Na;
Deng, Lili;
Zhang, Ying;
Shi, YanCai;
Liu, Bingbing

Publication type:

Article

Nuclear transport genes recurrently duplicate by means of RNA intermediates in Drosophila but not in other insects.

Published in:

BMC Genomics, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s12864-021-08170-4

By:

Mirsalehi, Ayda;
Markova, Dragomira N.;
Eslamieh, Mohammadmehdi;
Betrán, Esther

Publication type:

Article

Nuclear transport genes recurrently duplicate by means of RNA intermediates in Drosophila but not in other insects.

Published in:

BMC Genomics, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s12864-021-08170-4

By:

Mirsalehi, Ayda;
Markova, Dragomira N.;
Eslamieh, Mohammadmehdi;
Betrán, Esther

Publication type:

Article

Machine learning identifies signatures of host adaptation in the bacterial pathogen Salmonella enterica.

Published in:

PLoS Genetics, 2018, v. 14, n. 5, p. 1, doi. 10.1371/journal.pgen.1007333

By:

Wheeler, Nicole E.;
Gardner, Paul P.;
Barquist, Lars

Publication type:

Article

From pseudo-ceRNAs to circ-ceRNAs: a tale of cross-talk and competition.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 5, p. 541, doi. 10.1038/nsmb.2580

By:

Taulli, Riccardo;
Loretelli, Cristian;
Pandolfi, Pier Paolo

Publication type:

Article

Pseudogenes.

Published in:

Comparative & Functional Genomics, 2012, p. 1, doi. 10.1155/2012/424526

By:

Tutar, Yusuf

Publication type:

Article

Exploring Structural Plastome Evolution in Asterales: Insights from Off-Target Hybrid Enrichment Data on the Small Single-Copy Region.

Published in:

Journal of Molecular Evolution, 2025, v. 93, n. 1, p. 111, doi. 10.1007/s00239-024-10224-6

By:

Benítez-Villaseñor, Adriana;
Jost, Matthias;
Granados Mendoza, Carolina;
Wanke, Stefan;
Meza-Lázaro, Rubi N.;
Peñafiel Cevallos, Marcia;
Freire, Efraín;
Magallón, Susana

Publication type:

Article

Tracking the Diversity and Chromosomal Distribution of the Olfactory Receptor Gene Repertoires of Three Anurans Species.

Published in:

Journal of Molecular Evolution, 2023, v. 91, n. 6, p. 793, doi. 10.1007/s00239-023-10135-y

By:

Ferreira, Johnny Sousa;
Bruschi, Daniel Pacheco

Publication type:

Article

The Diabetes Susceptibility Gene SLC30A8 that Encodes the Zinc Transporter ZnT8 is a Pseudogene in Guinea Pigs Potentially Contributing to Low Guinea Pig Islet Zinc Content.

Published in:

Journal of Molecular Evolution, 2018, v. 86, n. 9, p. 613, doi. 10.1007/s00239-018-9873-5

By:

Syring, Kristen E.;
Bosma, Karin J.;
Oeser, James K.;
Shiota, Masakazu;
O'Brien, Richard M.

Publication type:

Article

First Report of a Mitochondrial Pseudogene in Agnathan Vertebrates (Cyclostomata: Petromyzontidae).

Published in:

Journal of Molecular Evolution, 2018, v. 86, n. 3/4, p. 187, doi. 10.1007/s00239-018-9835-y

By:

Strange, Rex Meade;
Delaney, Kimberly J.

Publication type:

Article

Evolution of Eukaryal and Archaeal Pseudouridine Synthase Pus10.

Published in:

Journal of Molecular Evolution, 2018, v. 86, n. 1, p. 77, doi. 10.1007/s00239-018-9827-y

By:

Geisler, Matt;
Fitzek, Elisabeth;
Gupta, Ramesh;
Joardar, Archi

Publication type:

Article

Are Synonymous Sites in Primates and Rodents Functionally Constrained?

Published in:

Journal of Molecular Evolution, 2016, v. 82, n. 1, p. 51, doi. 10.1007/s00239-015-9719-3

By:

Price, Nicholas;
Graur, Dan

Publication type:

Article

Are Synonymous Substitutions in Flowering Plant Mitochondria Neutral?

Published in:

Journal of Molecular Evolution, 2015, v. 81, n. 3/4, p. 131, doi. 10.1007/s00239-015-9704-x

By:

Wynn, Emily;
Christensen, Alan

Publication type:

Article

New Paralogues and Revised Time Line in the Expansion of the Vertebrate GH18 Family.

Published in:

Journal of Molecular Evolution, 2013, v. 76, n. 4, p. 240, doi. 10.1007/s00239-013-9553-4

By:

Hussain, Mushtaq;
Wilson, Joanna

Publication type:

Article

The Motilin Gene Evolved a New Function in Kangaroo Rats and Kangaroo Mice (Dipodomyinae).

Published in:

Journal of Molecular Evolution, 2012, v. 75, n. 3/4, p. 112, doi. 10.1007/s00239-012-9522-3

By:

He, Jing;
Zhou, Taicheng;
Irwin, David;
Shen, Yongyi;
Zhang, Yaping

Publication type:

Article

INSL4 Pseudogenes Help Define the Relaxin Family Repertoire in the Common Ancestor of Placental Mammals.

Published in:

2012

By:

Arroyo, José;
Hoffmann, Federico;
Good, Sara;
Opazo, Juan

Publication type:

Letter

Loss to gain: pseudogenes in microorganisms, focusing on eubacteria, and their biological significance.

Published in:

Applied Microbiology & Biotechnology, 2024, v. 108, n. 1, p. 1, doi. 10.1007/s00253-023-12971-w

By:

Yang, Yi;
Wang, Pengzhi;
Qaidi, Samir El;
Hardwidge, Philip R.;
Huang, Jinlin;
Zhu, Guoqiang

Publication type:

Article

Publisher Correction: HMGA1-pseudogene7 transgenic mice develop B cell lymphomas.

Published in:

2021

By:

De Martino, Marco;
De Biase, Davide;
Forzati, Floriana;
Credendino, Sara Carmela;
Palma, Giuseppe;
Barbieri, Antonio;
Arra, Claudio;
Paciello, Orlando;
Gaudio, Eugenio;
Ponzoni, Maurilio;
De Vita, Gabriella;
Chieffi, Paolo;
Bertoni, Francesco;
Fusco, Alfredo;
Esposito, Francesco

Publication type:

Correction Notice

PTENP1-AS contributes to BRAF inhibitor resistance and is associated with adverse clinical outcome in stage III melanoma.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-89389-9

By:

Vidarsdottir, Linda;
Azimi, Alireza;
Das, Ishani;
Sigvaldadottir, Ingibjorg;
Suryo Rahmanto, Aldwin;
Petri, Andreas;
Kauppinen, Sakari;
Ingvar, Christian;
Jönsson, Göran;
Olsson, Håkan;
Frostvik Stolt, Marianne;
Tuominen, Rainer;
Sangfelt, Olle;
Pokrovskaja Tamm, Katja;
Hansson, Johan;
Grandér, Dan;
Egyházi Brage, Suzanne;
Johnsson, Per

Publication type:

Article

Biallelic variants in the SORD gene are one of the most common causes of hereditary neuropathy among Czech patients.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-86857-0

By:

Laššuthová, P.;
Mazanec, R.;
Staněk, D.;
Sedláčková, L.;
Plevová, B.;
Haberlová, J.;
Seeman, P.

Publication type:

Article

On species delimitation, hybridization and population structure of cassava whitefly in Africa.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-87107-z

By:

Elfekih, S.;
Tay, W. T.;
Polaszek, A.;
Gordon, K. H. J.;
Kunz, D.;
Macfadyen, S.;
Walsh, T. K.;
Vyskočilová, S.;
Colvin, J.;
De Barro, P. J.

Publication type:

Article

Structural characterization and duplication modes of pseudogenes in plants.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-84778-6

By:

Mascagni, Flavia;
Usai, Gabriele;
Cavallini, Andrea;
Porceddu, Andrea

Publication type:

Article

The pseudogene problem and RT-qPCR data normalization; SYMPK: a suitable reference gene for papillary thyroid carcinoma.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41598-020-75495-7

By:

Javadirad, Seyed-Morteza;
Mokhtari, Mohammad;
Esfandiarpour, Ghazal;
Kolahdouzan, Mohsen

Publication type:

Article