Works matching DE "PROTEIN-protein interactions"

Results: 5000

Role of the "inflammation-immunity-metabolism" network in non-small cell lung cancer: a multi-omics analysis.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02692-z

By:

Zhang, Jingqi;
Lin, Liping;
Li, Wenyuan;
Guo, Jing

Publication type:

Article

Computational analysis of DEHP's oncogenic role in colorectal cancer.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02616-x

By:

Zhu, Zhou;
Qin, Jian;
He, Chungang;
Wang, Shuangyou;
Lu, Yaolin;
Wang, Shuai;
Zhong, Xiaogang

Publication type:

Article

Investigation ethanol extract of Piper crocatum leaves as condyloma acuminata inhibitor using protein interaction and molecular simulation.

Published in:

Journal of Applied Pharmaceutical Science, 2025, v. 15, n. 5, p. 176, doi. 10.7324/JAPS.2025.203484

By:

Idrus, Idrianti;
Indriatmi, Wresti;
Rasiha, Rasiha;
Fadilah, Fadilah

Publication type:

Article

Correlation of heat shock protein 1 expression with progression and prognosis of non-small cell lung cancer.

Published in:

Frontiers in Oncology, 2025, p. 1, doi. 10.3389/fonc.2025.1553248

By:

Wang, Rui;
Guo, Rongqi;
Huang, Tianyi;
Lu, Yu;
Zhang, Weisong;
Wang, Yihao;
Ni, Qinggan;
Song, Jianxiang;
Li, Xia

Publication type:

Article

Assessing interaction recovery of predicted protein-ligand poses.

Published in:

Journal of Cheminformatics, 2025, v. 17, n. 1, p. 1, doi. 10.1186/s13321-025-01011-6

By:

Errington, David;
Schneider, Constantin;
Bouysset, Cédric;
Dreyer, Frédéric A.

Publication type:

Article

Novel Interacting Partners of MGP-40, a Chitinase-Like Protein in Buffalo Mammary Epithelial Cells.

Published in:

Cell Biochemistry & Biophysics, 2025, v. 83, n. 2, p. 2127, doi. 10.1007/s12013-024-01623-z

By:

Vijay Anand, J.;
Jaswal, Shalini;
Jena, Manoj Kumar;
Kumar, Sudarshan;
Kaushik, Jai Kumar;
Mohanty, Ashok Kumar

Publication type:

Article

Understanding the Molecular Landscape of Endometriosis: A Bioinformatics Approach to Uncover Signaling Pathways and Hub Genes.

Published in:

IJ Pharmaceutical Research (IJPR), 2024, v. 23, n. 1, p. 1, doi. 10.5812/ijpr-144266

By:

Tian, Junhua;
Liu, Xiaochun

Publication type:

Article

Biaryl Phosphates and Phosphonates as Selective Inhibitors of the Transcription Factor STAT4.

Published in:

Angewandte Chemie, 2025, v. 137, n. 21, p. 1, doi. 10.1002/ange.202504420

By:

Brovchenko, Nadiya;
Berg, Angela;
Schubert, Sabine;
Gräb, Julian;
Münzel, Theresa;
Protzel, Christoph;
Natarajan, Kalaiselvi;
Berg, Thorsten

Publication type:

Article

Pericytes: The forgotten controllers of a functional blood–brain barrier.

Published in:

PLoS Pathogens, 2025, v. 21, n. 5, p. 1, doi. 10.1371/journal.ppat.1013145

By:

Roedel, Marshall;
Brooks, Nia;
Lamb, Tracey J.

Publication type:

Article

Screening and identification of protein 29 of Echinococcus granulosus interacting molecules.

Published in:

Frontiers in Cellular & Infection Microbiology, 2025, p. 1, doi. 10.3389/fcimb.2025.1560436

By:

Shang, Zailing;
Qiao, Fei;
Li, Yaning;
Ma, Xuelin;
Wang, Mingxia;
Yang, Wenji;
He, Tianyu;
Ma, Haixia;
Wang, Yana

Publication type:

Article

Fast and flu-rious: How to prevent and treat emerging influenza A viruses.

Published in:

PLoS Pathogens, 2025, v. 21, n. 5, p. 1, doi. 10.1371/journal.ppat.1013135

By:

Sesifredo, Isabel;
Batalha, Íris Luz;
Amorim, Maria João

Publication type:

Article

LncRNA NEAT1 participates in diminished ovarian reserve by affecting granulosa cell apoptosis and estradiol synthesis via the miR-204-5p/ESR1 axis.

Published in:

Journal of Ovarian Research, 2025, v. 18, n. 1, p. 1, doi. 10.1186/s13048-025-01683-6

By:

Dong, Li;
Wu, Haicui;
Qi, Fanghua;
Chen, Wen;
Xu, Yuan;
Li, Min;
Wang, Yuqi;
Yan, Rugen;
Cai, Pingping

Publication type:

Article

An in-depth exploration of the association between olanzapine, quetiapine and acute pancreatitis based on real-world datasets and network toxicology analysis.

Published in:

Frontiers in Pharmacology, 2025, p. 1, doi. 10.3389/fphar.2025.1529416

By:

Wang, Shuang;
Song, Liying;
Sun, Yuanjie;
Zhou, Haonan;
Yao, Jia

Publication type:

Article

A bacterial RING ubiquitin ligase triggering stepwise degradation of BRISC via TOLLIP-mediated selective autophagy manipulates host inflammatory response.

Published in:

Autophagy, 2025, v. 21, n. 6, p. 1353, doi. 10.1080/15548627.2025.2468140

By:

Pan, Xinming;
Sun, Yangyang;
Liu, Jianan;
Chen, Rong;
Zhang, Zhen;
Li, Caiying;
Yao, Huochun;
Ma, Jiale

Publication type:

Article

Buddleoside alleviates nonalcoholic steatohepatitis by targeting the AMPK-TFEB signaling pathway.

Published in:

Autophagy, 2025, v. 21, n. 6, p. 1316, doi. 10.1080/15548627.2025.2466145

By:

Chen, Meng;
Liu, Guowen;
Fang, Zhiyuan;
Gao, Wenwen;
Song, Yuxiang;
Lei, Lin;
Du, Xiliang;
Li, Xinwei

Publication type:

Article

Stress granules as transient reservoirs for autophagy proteins: a key mechanism for plant recovery from heat stress.

Published in:

Autophagy, 2025, v. 21, n. 6, p. 1373, doi. 10.1080/15548627.2025.2465395

By:

Feng, Lei;
Li, Xibao;
Shen, Wenjin;
Gao, Caiji

Publication type:

Article

ESRRA (estrogen related receptor, alpha) induces ribosomal protein RPLP1-mediated adaptive hepatic translation during prolonged starvation.

Published in:

Autophagy, 2025, v. 21, n. 6, p. 1283, doi. 10.1080/15548627.2025.2465183

By:

Tripathi, Madhulika;
Gauthier, Karine;
Sandireddy, Reddemma;
Zhou, Jin;
Gupta, Priyanka;
Sakthivel, Suganya;
Jiemin, Nah;
Arul, Kabilesh;
Tikno, Keziah;
Park, Sung-Hee;
Wu, Yajun;
Wang, Lijin;
Bay, Boon-Huat;
Ho, Lena;
Giguere, Vincent;
Ghosh, Sujoy;
McDonnell, Donald P.;
Yen, Paul M.;
Singh, Brijesh K.

Publication type:

Article

Limiting cap-dependent translation increases 20S proteasomal degradation and protects the proteomic integrity in autophagy-deficient skeletal muscle.

Published in:

Autophagy, 2025, v. 21, n. 6, p. 1212, doi. 10.1080/15548627.2025.2457925

By:

Dong, Han;
Lyu, Yifan;
Huang, Chien-Yung;
Tsai, Shih-Yin

Publication type:

Article

Structure of the human autophagy factor EPG5 and the molecular basis of its conserved mode of interaction with Atg8-family proteins.

Published in:

Autophagy, 2025, v. 21, n. 6, p. 1173, doi. 10.1080/15548627.2024.2447213

By:

Cheung, Yiu Wing Sunny;
Nam, Sung-Eun;
Fairlie, Gage M. J.;
Scheu, Karlton;
Bui, Jennifer M.;
Shariati, Hannah R.;
Gsponer, Jörg;
Yip, Calvin K.

Publication type:

Article

TCoCPIn reveals topological characteristics of chemical protein interaction networks for novel feature discovery.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-01410-7

By:

Wang, Jianshi;
Ohsawa, Yukio

Publication type:

Article

基于生物信息学探究 ESCRT 相关基因对骨肉瘤预后的评估价值.

Published in:

Journal of Kunming Medical University / Kunming Yike Daxue Xuebao, 2025, v. 46, n. 4, p. 36, doi. 10.12259/j.issn.2095-610X.S20250406

By:

马彬斌;
张少雄;
高永丽

Publication type:

Article

Artificial Biology – Assemble, Imitate, Adapt.

Published in:

Advanced Biology, 2025, v. 9, n. 5, p. 1, doi. 10.1002/adbi.202500236

By:

Städler, Brigitte;
Zelikin, Alexander N.;
Valero, Julián;
Andersen, Ebbe Sloth;
Sánchez, Samuel

Publication type:

Article

HOXA1 Expression in preeclampsia: immunohistochemical and bioinformatic analyses.

Published in:

Perinatal Journal, 2025, v. 33, n. 1, p. 11, doi. 10.59215/prn.25.0331003

By:

Türe, Zeynep;
Akdeniz, Ayşenur Sevinç;
Aydeniz Acar, Gül Ebru;
Aşır, Fırat;
Korak, Tuğcan;
Ege, Serhat

Publication type:

Article

Network Pharmacology and Molecular Docking to Identify the Molecular Targets of Novel Indole-quinoline Derivative in Cancer.

Published in:

Oriental Journal of Chemistry, 2025, v. 41, n. 1, p. 44, doi. 10.13005/ojc/410105

By:

MISHRA, SHOBHIT;
SACHDEVA, MONIKA;
NIMESH, HEMLATA

Publication type:

Article

Engineering of long-acting human growth hormone-Fc fusion proteins: Effects of valency, fusion position, and linker design on pharmacokinetics and efficacy.

Published in:

PLoS ONE, 2025, v. 20, n. 5, p. 1, doi. 10.1371/journal.pone.0323791

By:

Lee, Taekyeol;
Lee, Dongsop;
Jung, Eunee;
Son, Mikyung;
Koo, Kyohwan;
Choi, Jaehoon

Publication type:

Article

Assessing the impact of sampling bias on node centralities in synthetic and biological networks.

Published in:

NPJ Systems Biology & Applications, 2025, v. 11, n. 1, p. 1, doi. 10.1038/s41540-025-00526-w

By:

Salehzadeh-Yazdi, Ali;
Hütt, Marc-Thorsten

Publication type:

Article

Identification of a Highly Conserved Region Critical for the Functionality of the Cp190 Protein in Drosophila melanogaster.

Published in:

Doklady Biochemistry & Biophysics, 2025, v. 521, n. 1, p. 178, doi. 10.1134/S1607672924601434

By:

Melnikova, L. S.;
Balagurov, K. I.;
Georgiev, P. G.;
Golovnin, A. K.

Publication type:

Article

基于网络药理学和分子对接探讨麻黄鱼腥散治疗牛支原体肺炎的作用机制.

Published in:

Southwest China Journal of Agricultural Sciences, 2025, v. 38, n. 2, p. 411, doi. 10.16213/j.cnki.scjas.2025.2.021

By:

郭亚男;
祁燕蓉;
杨萌萌;
李珂;
邵喜成;
梁小军

Publication type:

Article

Editorial: Advanced therapeutic strategies and safety profiles in heart failure with reduced ejection fraction: contextualizing recent findings.

Published in:

Frontiers in Pharmacology, 2025, p. 1, doi. 10.3389/fphar.2025.1607362

By:

Asensio-Lopez, Maria del Carmen;
Severino, Paolo;
Lax, Antonio

Publication type:

Article

Structural insights into ligand recognition and activation of human purinergic receptor P2Y14.

Published in:

Cell Discovery, 2025, v. 11, n. 1, p. 1, doi. 10.1038/s41421-025-00799-9

By:

Gu, Quanchang;
Lv, Zhenyu;
Wang, Tianxin;
Tang, Wenqin;
Guo, Xuzhen;
Huang, Xiangling;
Li, Fahui;
Wang, Jiangyun

Publication type:

Article

The Regulatory Roles of RNA-Binding Proteins in Plant Salt Stress Response.

Published in:

Plants (2223-7747), 2025, v. 14, n. 9, p. 1402, doi. 10.3390/plants14091402

By:

Wang, Tangying;
Meng, Kaiyuan;
Zhu, Zilin;
Pan, Linxuan;
Okita, Thomas W.;
Zhang, Laining;
Tian, Li

Publication type:

Article

Evaluating the Mechanism Underlying Multi-Compound Synergy of Banxia Decoction in the Treatment of Hashimoto's Thyroiditis Based on Network Pharmacology and Molecular Docking.

Published in:

International Journal of General Medicine, 2025, v. 18, p. 1887, doi. 10.2147/IJGM.S502321

By:

Chen, Jian;
Wen, Fang;
Zhou, Juan;
Tan, Miduo

Publication type:

Article

TRIB3 Is a Hub Gene in Steatohepatitis and Aggravates Lipid Deposition and Inflammation in Hepatocytes.

Published in:

Diabetes, Metabolic Syndrome & Obesity: Targets & Therapy, 2025, v. 18, p. 1111, doi. 10.2147/DMSO.S486377

By:

Xia, Wen;
Xiao, Li;
Cheng, Huan;
Feng, Yuwei

Publication type:

Article

Network Pharmacology and Experimental Validation of the Effects of Shenling Baizhu San, Quzhi Ruangan Fang and Gexia Zhuyu Tang on the Intestinal Flora of Rats with NAFLD.

Published in:

Diabetes, Metabolic Syndrome & Obesity: Targets & Therapy, 2025, v. 18, p. 1165, doi. 10.2147/DMSO.S507039

By:

Guo, Jia;
Shi, Anhua;
Sun, Yanhong;
Zhang, Shunzhen;
Feng, Xiaoyi;
Chen, Yifan;
Yao, Zheng

Publication type:

Article

S-acylation in apoptotic and non-apoptotic cell death: a central regulator of membrane dynamics and protein function.

Published in:

Biochemical Society Transactions, 2025, v. 53, n. 2, p. 487, doi. 10.1042/BST20253012

By:

Manhertz-Patterson, Rojae;
Atilla-Gokcumen, G. Ekin

Publication type:

Article

In silico Analysis of a Nonsense Mutation Linked to Autosomal Recessive Hypercholesterolemia Type 4.

Published in:

American Journal of Undergraduate Research, 2025, v. 22, n. 1, p. 37, doi. 10.33697/ajur.2025.132

By:

Gardner, Caroline;
Good, Deborah J.

Publication type:

Article

Network Pharmacology and Experimental Validationbased Investigation of the Underlying Mechanism of Yi-Yi-Fu-Zi-Bai-Jiang-San of Nasopharyngeal Carcinoma.

Published in:

Journal of Cancer, 2025, v. 16, n. 7, p. 2212, doi. 10.7150/jca.109758

By:

Zehua Lin;
Ting Huang;
Baoai Han;
Zezhang Tao;
Xiong Chen

Publication type:

Article

Structural proteomics defines a sequential priming mechanism for the progesterone receptor.

Published in:

Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-59458-y

By:

Mann, Matthew D.;
Wang, Min;
Ferreon, Josephine C.;
Tsoi, Phoebe S.;
Suess, Michael P.;
Jain, Antrix;
Malovannaya, Anna;
Alvarez, Roberto Vera;
Pascal, Bruce D.;
Kumar, Raj;
Edwards, Dean P.;
Griffin, Patrick R.

Publication type:

Article

Proteomic characterization and bioinformatic insights into MUC18 function in gastric cancer.

Published in:

Journal of Analytical Science & Technology, 2025, v. 16, n. 1, p. 1, doi. 10.1186/s40543-025-00489-x

By:

Kim, Sung-Jin;
Lee, Su-Min;
Seo, Yun-Jeong;
Kim, Jae-Young

Publication type:

Article

Exploring the therapeutic potential and in vitro validation of baicalin for the treatment of triple-negative breast cancer.

Published in:

Frontiers in Pharmacology, 2025, p. 1, doi. 10.3389/fphar.2025.1530056

By:

Ma, Yuan;
Pan, Ying;
Zhao, Qiancheng;
Zhang, Chongheng;
He, Haitao;
Pan, Lihua;
Jia, Jianling;
Shi, Aiping;
Yang, Yiming;
Zhang, Wenfeng

Publication type:

Article

Negative sampling strategies impact the prediction of scale-free biomolecular network interactions with machine learning.

Published in:

BMC Biology, 2025, v. 23, n. 1, p. 1, doi. 10.1186/s12915-025-02231-w

By:

Li, Pengpai;
Shao, Bowen;
Zhao, Guoqing;
Liu, Zhi-Ping

Publication type:

Article

In-Silico and Computational Active Site-Driven Design and Characterization of Beta-NGF-Aβ Fusion Protein as a Novel and Targeted Alzheimer's Disease Therapy.

Published in:

Journal of Computational Biophysics & Chemistry, 2025, v. 24, n. 8, p. 1023, doi. 10.1142/S2737416525500085

By:

Naveed, Muhammad;
Ibrahim, Shumaila;
Aziz, Tariq;
Khatoon, Khadija;
Asim, Muhammad;
Majeed, Muhammad Nouman;
Hussain, Nageen;
Alhomrani, Majid;
Alsanie, Walaa F.;
Alamri, Abdulhakeem S.

Publication type:

Article

Editorial: Diabetic kidney disease: routes to drug development, pharmacology and underlying molecular mechanisms, volume II.

Published in:

Frontiers in Pharmacology, 2025, p. 1, doi. 10.3389/fphar.2025.1609100

By:

Bhatia, Divya;
Srivastava, Swayam Prakash

Publication type:

Article

Editorial: Targeting neuroinflammation for novel therapeutics in neurodegenerative diseases.

Published in:

Frontiers in Pharmacology, 2025, p. 1, doi. 10.3389/fphar.2025.1602495

By:

Khanal, Pukar;
Chikhale, Rupesh;
Machhi, Jatin

Publication type:

Article

Mechanism of total saponins of Ranunculus ternatus Thunb. in treatment of breast cancer based on liquid chromatography–mass spectrometry and network analysis.

Published in:

Frontiers in Pharmacology, 2025, p. 1, doi. 10.3389/fphar.2025.1506885

By:

Zhang, Yuanxin;
Nan, Shuo;
Zhao, Wei;
Xie, Haisheng;
Miao, Jinxin;
Miao, Mingsan

Publication type:

Article

Prmt1-mediated methylation regulates Ncoa4 stability to transactivate Adamts genes and promote bone extracellular matrix degradation in chronic hematogenous osteomyelitis.

Published in:

Biology Direct, 2025, v. 20, n. 1, p. 1, doi. 10.1186/s13062-025-00652-9

By:

Chen, Xun;
Duan, Ning;
Zhang, Wentao;
Song, Tao;
Cong, Fei

Publication type:

Article

Mapping the interaction surface between Ca<sub>V</sub>β and actin and its role in calcium channel clearance.

Published in:

Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-59548-x

By:

Castilla, Francisco;
Lugo, Victor;
Miranda-Laferte, Erick;
Jordan, Nadine;
Huesgen, Pitter F.;
Santiago-Schübel, Beatrix;
Alfonso-Prieto, Mercedes;
Hidalgo, Patricia

Publication type:

Article

Designer artificial environments for membrane protein synthesis.

Published in:

Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-59471-1

By:

Meyer, Conary;
Arizzi, Alessandra;
Henson, Tanner;
Aviran, Sharon;
Longo, Marjorie L.;
Wang, Aijun;
Tan, Cheemeng

Publication type:

Article

From function to structure: how myofibrillogenesis influences the transverse–axial tubular system development and its peculiarities.

Published in:

Frontiers in Physiology, 2025, p. 1, doi. 10.3389/fphys.2025.1576133

By:

Sevcikova Tomaskova, Zuzana;
Mackova, Katarina

Publication type:

Article

CDK members and ribosomal proteins, a crucial role players in serous capillary ovarian cancer: Insights from gene expression and protein interaction networks.

Published in:

Indian Journal of Biochemistry & Biophysics, 2025, v. 62, n. 5, p. 490, doi. 10.56042/ijbb.v62i5.12347

By:

Kannan, Kavitha;
Arumugam, Mohanapriya;
Shukla, Deepanshu;
Swaminathan, Venkataramanan

Publication type:

Article