Works about PROTEIN-drug interactions

Results: 83

Exploration of interaction scoring criteria in the CANDO platform.

Published in:

BMC Research Notes, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s13104-019-4356-3

By:

Falls, Zackary;
Mangione, William;
Schuler, James;
Samudrala, Ram

Publication type:

Article

Diverse cutaneous side effects associated with BRAF inhibitor therapy: a clinicopathologic study.

Published in:: Current Medical Literature: Dermatology, 2012, v. 17, n. 3, p. 79
Publication type:: Article

Computational Prediction and Analysis of Associations between Small Molecules and Binding-Associated S-Nitrosylation Sites.

Published in:

Molecules, 2018, v. 23, n. 4, p. 954, doi. 10.3390/molecules23040954

By:

Huang, Guohua;
Li, Jincheng;
Zhao, Chenglin

Publication type:

Article

A Combined Molecular Docking/Dynamics Approach to Probe the Binding Mode of Cancer Drugs with Cytochrome P450 3A4.

Published in:

Molecules, 2015, v. 20, n. 8, p. 14915, doi. 10.3390/molecules200814915

By:

Panneerselvam, Suresh;
Yesudhas, Dhanusha;
Durai, Prasannavenkatesh;
Anwar, Muhammad Ayaz;
Gosu, Vijayakumar;
Choi, Sangdun

Publication type:

Article

Current limitations and future opportunities for prediction of DILI from in vitro.

Published in:

Archives of Toxicology, 2017, v. 91, n. 1, p. 131, doi. 10.1007/s00204-016-1874-9

By:

Funk, Christoph;
Roth, Adrian

Publication type:

Article

Pharmaco-miR: linking microRNAs and drug effects.

Published in:

Briefings in Bioinformatics, 2014, v. 15, n. 4, p. 648, doi. 10.1093/bib/bbs082

By:

Rukov, Jakob Lewin;
Wilentzik, Roni;
Jaffe, Ishai;
Vinther, Jeppe;
Shomron, Noam

Publication type:

Article

An in silico approach to analyze HCV genotype-specific binding-site variation and its effect on drug–protein interaction.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41598-020-77720-9

By:

Khalid, Ramsha;
Anwar, Muhammad Faraz;
Raees, Muhammad Aanish;
Naeem, Sadaf;
Abidi, Syed Hani;
Ali, Syed

Publication type:

Article

A model-based analysis of phenytoin and carbamazepine toxicity treatment using binding-competition during hemodialysis.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-68333-3

By:

Maheshwari, Vaibhav;
Hoffman, Robert S.;
Thijssen, Stephan;
Tao, Xia;
Fuertinger, Doris H.;
Kotanko, Peter

Publication type:

Article

Quantitative Structure-activity Relationship (QSAR) Models for Docking Score Correction.

Published in:

Molecular Informatics, 2017, v. 36, n. 1/2, p. n/a, doi. 10.1002/minf.201600013

By:

Fukunishi, Yoshifumi;
Yamasaki, Satoshi;
Yasumatsu, Isao;
Takeuchi, Koh;
Kurosawa, Takashi;
Nakamura, Haruki

Publication type:

Article

Effect of CdTe QDs on the protein-drug interactions.

Published in:

Nanotoxicology, 2012, v. 6, n. 3, p. 304, doi. 10.3109/17435390.2011.579359

By:

Xiao, Jianbo;
Kai, Guoyin;
Chen, Xiaoqing

Publication type:

Article

Tanshinone IIA combined with adriamycin inhibited malignant biological behaviors of NSCLC A549 cell line in a synergistic way.

Published in:

BMC Cancer, 2016, v. 16, p. 1, doi. 10.1186/s12885-016-2921-x

By:

Jun Xie;
Jia-Hui Liu;
Heng Liu;
Xiao-Zhong Liao;
Yuling Chen;
Mei-Gui Lin;
Yue-Yu Gu;
Tao-Li Liu;
Dong-Mei Wang;
Hui Ge;
Sui-Lin Mo

Publication type:

Article

Project ranks billions of drug interactions.

Published in:

Nature, 2013, v. 503, n. 7477, p. 449, doi. 10.1038/503449a

By:

Reardon, Sara

Publication type:

Article

SELF-BLM: Prediction of drug-target interactions via self-training SVM.

Published in:

PLoS ONE, 2017, v. 12, n. 2, p. 1, doi. 10.1371/journal.pone.0171839

By:

Keum, Jongsoo;
Nam, Hojung

Publication type:

Article

The Interactions of P-Glycoprotein with Antimalarial Drugs, Including Substrate Affinity, Inhibition and Regulation.

Published in:

PLoS ONE, 2016, v. 11, n. 4, p. 1, doi. 10.1371/journal.pone.0152677

By:

Senarathna, S M D K Ganga;
Page-Sharp, Madhu;
Crowe, Andrew

Publication type:

Article

Structural Basis of Non-Steroidal Anti-Inflammatory Drug Diclofenac Binding to Human Serum Albumin.

Published in:

Chemical Biology & Drug Design, 2015, v. 86, n. 5, p. 1178, doi. 10.1111/cbdd.12583

By:

Zhang, Yao;
Lee, Philbert;
Liang, Shichu;
Zhou, Zuping;
Wu, Xiaoyang;
Yang, Feng;
Liang, Hong

Publication type:

Article

Some Anti-Inflammatory Agents Inhibit Esterase Activities of Human Carbonic Anhydrase Isoforms I and II: An In Vitro Study.

Published in:

Chemical Biology & Drug Design, 2015, v. 86, n. 4, p. 857, doi. 10.1111/cbdd.12561

By:

Alım, Zuhal;
Kılınç, Namık;
İşgör, Mehmet M.;
Şengül, Bülent;
Beydemir, Şükrü

Publication type:

Article

X-ray Crystallographic and Fluorometric Analysis of the Interactions of Rhein to Human Serum Albumin.

Published in:

Chemical Biology & Drug Design, 2014, v. 83, n. 2, p. 167, doi. 10.1111/cbdd.12208

By:

Li, Mei;
Lee, Philbert;
Zhang, Yao;
Ma, ZhiYuan;
Yang, Feng;
Zhou, ZuPing;
Wu, XiaoYang;
Liang, Hong

Publication type:

Article

JAMI: a Java library for molecular interactions and data interoperability.

Published in:

BMC Bioinformatics, 2018, v. 19, p. 1, doi. 10.1186/s12859-018-2119-0

By:

Sivade (Dumousseau), M.;
Koch, M.;
Shrivastava, A.;
Alonso-López, D.;
De Las Rivas, J.;
del-Toro, N.;
Combe, C. W.;
Meldal, B. H. M.;
Heimbach, J.;
Rappsilber, J.;
Sullivan, J.;
Yehudi, Y.;
Orchard, S.

Publication type:

Article

Repositioning drugs by targeting network modules: a Parkinson's disease case study.

Published in:

BMC Bioinformatics, 2017, v. 18, p. 17, doi. 10.1186/s12859-017-1889-0

By:

Zongliang Yue;
Arora, Itika;
Zhang, Eric Y.;
Laufer, Vincent;
Bridges, S. Louis;
Chen, Jake Y.

Publication type:

Article

Stepwise frontal affinity chromatography model for drug and protein interaction.

Published in:

Analytical & Bioanalytical Chemistry, 2018, v. 410, n. 23, p. 5807, doi. 10.1007/s00216-018-1194-4

By:

He, Xiaoshuang;
Sui, Yue;
Wang, Sicen

Publication type:

Article

On-column entrapment of alpha-acid glycoprotein for studies of drug-protein binding by high-performance affinity chromatography.

Published in:

Analytical & Bioanalytical Chemistry, 2016, v. 408, n. 21, p. 5745, doi. 10.1007/s00216-016-9677-7

By:

Anguizola, Jeanethe;
Bi, Cong;
Koke, Michelle;
Jackson, Abby;
Hage, David

Publication type:

Article

Analysis of free drug fractions in human serum by ultrafast affinity extraction and two-dimensional affinity chromatography.

Published in:

Analytical & Bioanalytical Chemistry, 2016, v. 408, n. 1, p. 131, doi. 10.1007/s00216-015-9082-7

By:

Zheng, Xiwei;
Podariu, Maria;
Matsuda, Ryan;
Hage, David

Publication type:

Article

Analysis of glipizide binding to normal and glycated human serum albumin by high-performance affinity chromatography.

Published in:

Analytical & Bioanalytical Chemistry, 2015, v. 407, n. 18, p. 5309, doi. 10.1007/s00216-015-8688-0

By:

Matsuda, Ryan;
Li, Zhao;
Zheng, Xiwei;
Hage, David

Publication type:

Article

Analysis of drug interactions with very low density lipoprotein by high-performance affinity chromatography.

Published in:

Analytical & Bioanalytical Chemistry, 2014, v. 406, n. 25, p. 6203, doi. 10.1007/s00216-014-8081-4

By:

Sobansky, Matthew;
Hage, David

Publication type:

Article

A multiplexed screening method for agonists and antagonists of the estrogen receptor protein.

Published in:

Analytical & Bioanalytical Chemistry, 2012, v. 403, n. 5, p. 1373, doi. 10.1007/s00216-012-5933-7

By:

Li, Zhonghui;
Yan, Ming;
Li, Zhoumin;
Vuki, Maika;
Wu, Dan;
Liu, Fei;
Zhong, Wenying;
Zhang, Luyong;
Xu, Danke

Publication type:

Article

Fragmentation methods on the balance: unambiguous top-down mass spectrometric characterization of oxaliplatin-ubiquitin binding sites.

Published in:

Analytical & Bioanalytical Chemistry, 2012, v. 402, n. 8, p. 2655, doi. 10.1007/s00216-011-5523-0

By:

Meier, Samuel;
Tsybin, Yury;
Dyson, Paul;
Keppler, Bernhard;
Hartinger, Christian

Publication type:

Article

Sulfadiazine binds and unfolds bovine serum albumin: an in vitro study.

Published in:

Molecular Biology Reports, 2013, v. 40, n. 11, p. 6081, doi. 10.1007/s11033-013-2719-8

By:

Ali, Mohd.;
Al-Lohedan, Hamad

Publication type:

Article

Drug-protein interactions: Mechanisms of potency.

Published in:

Nature Chemistry, 2013, v. 5, n. 3, p. 152, doi. 10.1038/nchem.1586

By:

Cheatum, Christopher M.

Publication type:

Article

Estimation of Maximum Recommended Therapeutic Dose Using Predicted Promiscuity and Potency.

Published in:

CTS: Clinical & Translational Science, 2016, v. 9, n. 6, p. 311, doi. 10.1111/cts.12422

By:

Liu, T;
Oprea, T;
Ursu, O;
Hasselgren, C;
Altman, RB

Publication type:

Article

Daunorubicin forms a specific complex with a secreted serine protease of Streptomyces peucetius.

Published in:

World Journal of Microbiology & Biotechnology, 2014, v. 30, n. 1, p. 253, doi. 10.1007/s11274-013-1442-x

By:

Dubey, Rashmi;
Kattusamy, Karuppasamy;
Dharmalingam, Kuppamuthu;
Prasad, Ranjan

Publication type:

Article

How does fatty acid influence anti-thyroid drugs binding and specificity toward protein human serum albumin? A blind docking simulation study.

Published in:

Journal of Chemical Sciences, 2014, v. 126, n. 6, p. 1929, doi. 10.1007/s12039-014-0718-5

By:

PAUL, BIJAN;
GUCHHAIT, NIKHIL

Publication type:

Article

Drug and Protein Interaction Network Construction for Drug Repurposing in Alzheimer's Disease.

Published in:

Future Pharmacology, 2023, v. 3, n. 4, p. 731, doi. 10.3390/futurepharmacol3040045

By:

Dimitrakopoulos, Georgios N.;
Vrahatis, Aristidis G.;
Exarchos, Themis P.;
Krokidis, Marios G.;
Vlamos, Panagiotis

Publication type:

Article

A multitechnique approach to probe the interaction of a therapeutic tyrosine kinase inhibitor nintedanib and bovine serum albumin.

Published in:

Preparative Biochemistry & Biotechnology, 2017, v. 47, n. 7, p. 655, doi. 10.1080/10826068.2016.1275014

By:

Abdelhameed, Ali Saber;
Nusrat, Saima;
Paliwal, Sanjhi;
Zaman, Masihuz;
Zaidi, Nida;
Khan, Rizwan Hasan

Publication type:

Article

Incorporating chemical sub-structures and protein evolutionary information for inferring drug-target interactions.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-62891-2

By:

Wang, Lei;
You, Zhu-Hong;
Li, Li-Ping;
Yan, Xin;
Zhang, Wei

Publication type:

Article

Function of YY1 in long-distance DNA interactions.

Published in:

Frontiers in Immunology, 2014, v. 5, p. 1, doi. 10.3389/fimmu.2014.00045

By:

Atchison, Michael L.

Publication type:

Article

Leveraging 3D chemical similarity, target and phenotypic data in the identification of drug-protein and drug-adverse effect associations.

Published in:

Journal of Cheminformatics, 2016, v. 8, p. 1, doi. 10.1186/s13321-016-0147-1

By:

Vilar, Santiago;
Hripcsak, George

Publication type:

Article

Exploring the binding sites and binding mechanism for hydrotrope encapsulated griseofulvin drug on γ-tubulin protein.

Published in:

PLoS ONE, 2018, v. 13, n. 1, p. 1, doi. 10.1371/journal.pone.0190209

By:

Das, Shubhadip;
Paul, Sandip

Publication type:

Article

Using the drug-protein interactome to identify anti-ageing compounds for humans.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 01, p. 1, doi. 10.1371/journal.pcbi.1006639

By:

Fuentealba, Matías;
Dönertaş, Handan Melike;
Williams, Rhianna;
Labbadia, Johnathan;
Thornton, Janet M.;
Partridge, Linda

Publication type:

Article

Effective and Selective Anti‐Cancer Protein Delivery via All‐Functions‐in‐One Nanocarriers Coupled with Visible Light‐Responsive, Reversible Protein Engineering.

Published in:

Advanced Functional Materials, 2018, v. 28, n. 14, p. 1, doi. 10.1002/adfm.201706710

By:

He, Hua;
Chen, Yongbing;
Li, Yongjuan;
Song, Ziyuan;
Zhong, Yinan;
Zhu, Rongying;
Cheng, Jianjun;
Yin, Lichen

Publication type:

Article

Antiretroviral unbound concentration during pregnancy: piece of interest in the puzzle?

Published in:

2017

By:

Metsu, D.;
Toutain, P. L.;
Chatelut, E.;
Delobel, P.;
Gandia, P.

Publication type:

journal article

Relating drug–protein interaction network with drug side effects.

Published in:

Bioinformatics, 2012, v. 28, n. 18, p. i522, doi. 10.1093/bioinformatics/bts383

By:

Mizutani, Sayaka;
Pauwels, Edouard;
Stoven, Véronique;
Goto, Susumu;
Yamanishi, Yoshihiro

Publication type:

Article

Molecular docking study of Cytochalasin H and Fascin interactions as prospective targets for gastric cancer.

Published in:

Jorjani Biomedicine Journal, 2023, v. 11, n. 4, p. 8, doi. 10.61186/jorjanibiomedj.11.4.8

By:

Heidarzadeh, Samaneh;
Ashrafmansouri, Seyedeh-Samira

Publication type:

Article

Development and Validation of a Free Carbamazepine Assay on an Automated Chemistry Analyzer.

Published in:

Journal of Applied Laboratory Medicine, 2020, v. 5, n. 2, p. 357, doi. 10.1093/jalm/jfz003

By:

Xiaochun Zhang;
Boyert, Nicole;
Mitro, Matthew;
Tang, Xiaoying;
Bowers, Kathleen;
McShane, Adam J.

Publication type:

Article

Molecular encapsulation of Valganciclovir by β-cyclodextrin influences its binding to bovine serum albumin: a spectroscopic study.

Published in:

Physics & Chemistry of Liquids, 2019, v. 57, n. 1, p. 43, doi. 10.1080/00319104.2017.1408110

By:

Natesan, Sudha;
Enoch, Israel VMV

Publication type:

Article

Free dug concentrations in pregnancy: Bound to measure unbound?

Published in:

2017

By:

Schalkwijk, Stein;
Greupink, Rick;
Burger, David

Publication type:

Editorial

Effects of BCRP and P-gp Modulators on the Penetration of Aflatoxin B<sub>1</sub> into the Mouse Brain.

Published in:

Kafkas Universitesi Veteriner Fakultesi Dergisi, 2017, v. 23, n. 1, p. 95, doi. 10.9775/kvfd.2016.15904

By:

TRAS, Bunyamin;
UNEY, Kamil;
DIK, Burak;
CETIN, Gul;
CORUM, Orhan;
ATALAY, Sema

Publication type:

Article

Structure/Activity Analysis of TASK-3 Channel Antagonists Based on a 5,6,7,8 tetrahydropyrido[4,3-d]pyrimidine.

Published in:

International Journal of Molecular Sciences, 2019, v. 20, n. 9, p. 2252, doi. 10.3390/ijms20092252

By:

Ramírez, David;
Bedoya, Mauricio;
Kiper, Aytug K.;
Rinné, Susanne;
Morales-Navarro, Samuel;
Hernández-Rodríguez, Erix W.;
Sepúlveda, Francisco V.;
Decher, Niels;
González, Wendy

Publication type:

Article

Exploiting large-scale drug-protein interaction information for computational drug repurposing.

Published in:

BMC Bioinformatics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2105-15-210

By:

Ruifeng Liu;
Singh, Narender;
Tawa, Gregory J.;
Wallqvist, Anders;
Reifman, Jaques

Publication type:

Article

Supporting precision medicine by data mining across multi-disciplines: an integrative approach for generating comprehensive linkages between single nucleotide variants (SNVs) and drug-binding sites.

Published in:

Bioinformatics, 2017, v. 33, n. 11, p. 1621, doi. 10.1093/bioinformatics/btx031

By:

Choudhury, Amrita Roy;
Tiejun Cheng;
Phan, Lon;
Bryant, Stephen H.;
Yanli Wang

Publication type:

Article

SPOT-ligand 2: improving structure-based virtual screening by binding-homology search on an expanded structural template library.

Published in:

Bioinformatics, 2017, v. 33, n. 8, p. 1238, doi. 10.1093/bioinformatics/btw829

By:

Litfin, Thomas;
Yaoqi Zhou;
Yuedong Yang

Publication type:

Article