Works about PROTEIN-drug interactions

Results: 83

The Relationship between Hydrophobicity and Drug-Protein Binding in Human Serum Albumin: A Quartz Crystal Microbalance Study.

Published in:

Biophysica, 2022, v. 2, n. 2, p. 113, doi. 10.3390/biophysica2020012

By:

Alhankawi, Ahmad R.;
Al-Husseini, Jacob K.;
Spindler, Archie;
Baker, Clark;
Shoniwa, Tonderai T.;
Ahmed, Mohammed;
Chiarelli, Peter A.;
Johal, Malkiat S.

Publication type:

Article

Role of FK506 binding protein 5 (FKBP5) in osteoclast differentiation.

Published in:

Modern Rheumatology, 2013, v. 23, n. 6, p. 1133, doi. 10.3109/s10165-012-0809-4

By:

Kimura, Miho;
Nagai, Tatsuo;
Matsushita, Reiko;
Hashimoto, Atsushi;
Miyashita, Toshiyuki;
Hirohata, Shunsei

Publication type:

Article

Quantitative Structure-activity Relationship (QSAR) Models for Docking Score Correction.

Published in:

Molecular Informatics, 2017, v. 36, n. 1/2, p. n/a, doi. 10.1002/minf.201600013

By:

Fukunishi, Yoshifumi;
Yamasaki, Satoshi;
Yasumatsu, Isao;
Takeuchi, Koh;
Kurosawa, Takashi;
Nakamura, Haruki

Publication type:

Article

Leveraging 3D chemical similarity, target and phenotypic data in the identification of drug-protein and drug-adverse effect associations.

Published in:

Journal of Cheminformatics, 2016, v. 8, p. 1, doi. 10.1186/s13321-016-0147-1

By:

Vilar, Santiago;
Hripcsak, George

Publication type:

Article

Drug-protein interactions: Mechanisms of potency.

Published in:

Nature Chemistry, 2013, v. 5, n. 3, p. 152, doi. 10.1038/nchem.1586

By:

Cheatum, Christopher M.

Publication type:

Article

Tanshinone IIA combined with adriamycin inhibited malignant biological behaviors of NSCLC A549 cell line in a synergistic way.

Published in:

BMC Cancer, 2016, v. 16, p. 1, doi. 10.1186/s12885-016-2921-x

By:

Jun Xie;
Jia-Hui Liu;
Heng Liu;
Xiao-Zhong Liao;
Yuling Chen;
Mei-Gui Lin;
Yue-Yu Gu;
Tao-Li Liu;
Dong-Mei Wang;
Hui Ge;
Sui-Lin Mo

Publication type:

Article

Development and Validation of a Free Carbamazepine Assay on an Automated Chemistry Analyzer.

Published in:

Journal of Applied Laboratory Medicine, 2020, v. 5, n. 2, p. 357, doi. 10.1093/jalm/jfz003

By:

Xiaochun Zhang;
Boyert, Nicole;
Mitro, Matthew;
Tang, Xiaoying;
Bowers, Kathleen;
McShane, Adam J.

Publication type:

Article

Function of YY1 in long-distance DNA interactions.

Published in:

Frontiers in Immunology, 2014, v. 5, p. 1, doi. 10.3389/fimmu.2014.00045

By:

Atchison, Michael L.

Publication type:

Article

Rapid Screening of Drug-Protein Binding Using High-Performance Affinity Chromatography with Columns Containing Immobilized Human Serum Albumin.

Published in:

Journal of Analytical Methods in Chemistry, 2013, p. 1, doi. 10.1155/2013/439039

By:

Ying-Fei Li;
Xiao-Qiong Zhang;
Wei-Yu Hu;
Zheng Li;
Ping-Xia Liu;
Zhen-Qing Zhang

Publication type:

Article

The Binding Effect of Proteins on Medications and Its Impact on Electrochemical Sensing: Antipsychotic Clozapine as a Case Study.

Published in:

Pharmaceuticals (14248247), 2017, v. 10, n. 3, p. 69, doi. 10.3390/ph10030069

By:

Banis, George E.;
Winkler, Thomas;
Barton, Patricia;
Chocron, Sheryl E.;
Eunkyoung Kim;
Kelly, Deanna L.;
Payne, Gregory F.;
Ben-Yoav, Hadar;
Ghodssi, Reza

Publication type:

Article

Integration of Ligand-Based Drug Screening with Structure-Based Drug Screening by Combining Maximum Volume Overlapping Score with Ligand Docking.

Published in:

Pharmaceuticals (14248247), 2012, v. 5, n. 12, p. 1332, doi. 10.3390/ph5121332

By:

Fukunishi, Yoshifumi;
Nakamura, Haruki

Publication type:

Article

Molecular dynamics simulation studies of betulinic acid with human serum albumin.

Published in:

Journal of Molecular Modeling, 2012, v. 18, n. 6, p. 2589, doi. 10.1007/s00894-011-1287-x

By:

Malleda, Chandramouli;
Ahalawat, Navjeet;
Gokara, Mahesh;
Subramanyam, Rajagopal

Publication type:

Article

Molecular encapsulation of Valganciclovir by β-cyclodextrin influences its binding to bovine serum albumin: a spectroscopic study.

Published in:

Physics & Chemistry of Liquids, 2019, v. 57, n. 1, p. 43, doi. 10.1080/00319104.2017.1408110

By:

Natesan, Sudha;
Enoch, Israel VMV

Publication type:

Article

Characterizing the binding interactions between P-glycoprotein and eight known cardiovascular transport substrates.

Published in:

Pharmacology Research & Perspectives, 2015, v. 3, n. 2, p. n/a, doi. 10.1002/prp2.114

By:

Jagodinsky, Justin C.;
Akgun, Ugur

Publication type:

Article

Inferring Drug-Protein–Side Effect Relationships from Biomedical Text.

Published in:

Genes, 2019, v. 10, n. 2, p. 159, doi. 10.3390/genes10020159

By:

Song, Min;
Baek, Seung Han;
Heo, Go Eun;
Lee, Jeong-Hoon

Publication type:

Article

Exploration of interaction scoring criteria in the CANDO platform.

Published in:

BMC Research Notes, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s13104-019-4356-3

By:

Falls, Zackary;
Mangione, William;
Schuler, James;
Samudrala, Ram

Publication type:

Article

SELF-BLM: Prediction of drug-target interactions via self-training SVM.

Published in:

PLoS ONE, 2017, v. 12, n. 2, p. 1, doi. 10.1371/journal.pone.0171839

By:

Keum, Jongsoo;
Nam, Hojung

Publication type:

Article

The Interactions of P-Glycoprotein with Antimalarial Drugs, Including Substrate Affinity, Inhibition and Regulation.

Published in:

PLoS ONE, 2016, v. 11, n. 4, p. 1, doi. 10.1371/journal.pone.0152677

By:

Senarathna, S M D K Ganga;
Page-Sharp, Madhu;
Crowe, Andrew

Publication type:

Article

A Modified Amino Acid Network Model Contains Similar and Dissimilar Weight.

Published in:

Computational & Mathematical Methods in Medicine, 2013, p. 1, doi. 10.1155/2013/197892

By:

Xiong Jiao;
Lifeng Yang;
Meiwen An;
Weiyi Chen

Publication type:

Article

Structure/Activity Analysis of TASK-3 Channel Antagonists Based on a 5,6,7,8 tetrahydropyrido[4,3-d]pyrimidine.

Published in:

International Journal of Molecular Sciences, 2019, v. 20, n. 9, p. 2252, doi. 10.3390/ijms20092252

By:

Ramírez, David;
Bedoya, Mauricio;
Kiper, Aytug K.;
Rinné, Susanne;
Morales-Navarro, Samuel;
Hernández-Rodríguez, Erix W.;
Sepúlveda, Francisco V.;
Decher, Niels;
González, Wendy

Publication type:

Article

Effective and Selective Anti‐Cancer Protein Delivery via All‐Functions‐in‐One Nanocarriers Coupled with Visible Light‐Responsive, Reversible Protein Engineering.

Published in:

Advanced Functional Materials, 2018, v. 28, n. 14, p. 1, doi. 10.1002/adfm.201706710

By:

He, Hua;
Chen, Yongbing;
Li, Yongjuan;
Song, Ziyuan;
Zhong, Yinan;
Zhu, Rongying;
Cheng, Jianjun;
Yin, Lichen

Publication type:

Article

Pharmaco-miR: linking microRNAs and drug effects.

Published in:

Briefings in Bioinformatics, 2014, v. 15, n. 4, p. 648, doi. 10.1093/bib/bbs082

By:

Rukov, Jakob Lewin;
Wilentzik, Roni;
Jaffe, Ishai;
Vinther, Jeppe;
Shomron, Noam

Publication type:

Article

Free dug concentrations in pregnancy: Bound to measure unbound?

Published in:

2017

By:

Schalkwijk, Stein;
Greupink, Rick;
Burger, David

Publication type:

Editorial

Effect of CdTe QDs on the protein-drug interactions.

Published in:

Nanotoxicology, 2012, v. 6, n. 3, p. 304, doi. 10.3109/17435390.2011.579359

By:

Xiao, Jianbo;
Kai, Guoyin;
Chen, Xiaoqing

Publication type:

Article

Effects of BCRP and P-gp Modulators on the Penetration of Aflatoxin B<sub>1</sub> into the Mouse Brain.

Published in:

Kafkas Universitesi Veteriner Fakultesi Dergisi, 2017, v. 23, n. 1, p. 95, doi. 10.9775/kvfd.2016.15904

By:

TRAS, Bunyamin;
UNEY, Kamil;
DIK, Burak;
CETIN, Gul;
CORUM, Orhan;
ATALAY, Sema

Publication type:

Article

Exploring the binding sites and binding mechanism for hydrotrope encapsulated griseofulvin drug on γ-tubulin protein.

Published in:

PLoS ONE, 2018, v. 13, n. 1, p. 1, doi. 10.1371/journal.pone.0190209

By:

Das, Shubhadip;
Paul, Sandip

Publication type:

Article

Daunorubicin forms a specific complex with a secreted serine protease of Streptomyces peucetius.

Published in:

World Journal of Microbiology & Biotechnology, 2014, v. 30, n. 1, p. 253, doi. 10.1007/s11274-013-1442-x

By:

Dubey, Rashmi;
Kattusamy, Karuppasamy;
Dharmalingam, Kuppamuthu;
Prasad, Ranjan

Publication type:

Article

How does fatty acid influence anti-thyroid drugs binding and specificity toward protein human serum albumin? A blind docking simulation study.

Published in:

Journal of Chemical Sciences, 2014, v. 126, n. 6, p. 1929, doi. 10.1007/s12039-014-0718-5

By:

PAUL, BIJAN;
GUCHHAIT, NIKHIL

Publication type:

Article

JAMI: a Java library for molecular interactions and data interoperability.

Published in:

BMC Bioinformatics, 2018, v. 19, p. 1, doi. 10.1186/s12859-018-2119-0

By:

Sivade (Dumousseau), M.;
Koch, M.;
Shrivastava, A.;
Alonso-López, D.;
De Las Rivas, J.;
del-Toro, N.;
Combe, C. W.;
Meldal, B. H. M.;
Heimbach, J.;
Rappsilber, J.;
Sullivan, J.;
Yehudi, Y.;
Orchard, S.

Publication type:

Article

Repositioning drugs by targeting network modules: a Parkinson's disease case study.

Published in:

BMC Bioinformatics, 2017, v. 18, p. 17, doi. 10.1186/s12859-017-1889-0

By:

Zongliang Yue;
Arora, Itika;
Zhang, Eric Y.;
Laufer, Vincent;
Bridges, S. Louis;
Chen, Jake Y.

Publication type:

Article

Supporting precision medicine by data mining across multi-disciplines: an integrative approach for generating comprehensive linkages between single nucleotide variants (SNVs) and drug-binding sites.

Published in:

Bioinformatics, 2017, v. 33, n. 11, p. 1621, doi. 10.1093/bioinformatics/btx031

By:

Choudhury, Amrita Roy;
Tiejun Cheng;
Phan, Lon;
Bryant, Stephen H.;
Yanli Wang

Publication type:

Article

SPOT-ligand 2: improving structure-based virtual screening by binding-homology search on an expanded structural template library.

Published in:

Bioinformatics, 2017, v. 33, n. 8, p. 1238, doi. 10.1093/bioinformatics/btw829

By:

Litfin, Thomas;
Yaoqi Zhou;
Yuedong Yang

Publication type:

Article

Identification of drug-target interaction from interactome network with 'guilt-by-association' principle and topology features.

Published in:

Bioinformatics, 2016, v. 32, n. 7, p. 1057, doi. 10.1093/bioinformatics/btv695

By:

Zhan-Chao Li;
Meng-Hua Huang;
Wen-Qian Zhong;
Zhi-Qing Liu;
Yun Xie;
Zong Dai;
Xiao-Yong Zou

Publication type:

Article

Relating drug–protein interaction network with drug side effects.

Published in:

Bioinformatics, 2012, v. 28, n. 18, p. i522, doi. 10.1093/bioinformatics/bts383

By:

Mizutani, Sayaka;
Pauwels, Edouard;
Stoven, Véronique;
Goto, Susumu;
Yamanishi, Yoshihiro

Publication type:

Article

Drug and Protein Interaction Network Construction for Drug Repurposing in Alzheimer's Disease.

Published in:

Future Pharmacology, 2023, v. 3, n. 4, p. 731, doi. 10.3390/futurepharmacol3040045

By:

Dimitrakopoulos, Georgios N.;
Vrahatis, Aristidis G.;
Exarchos, Themis P.;
Krokidis, Marios G.;
Vlamos, Panagiotis

Publication type:

Article

Combining HIC, SEC, and IEX with Fluorescence Polarization for Drug Target Discovery.

Published in:

LC-GC Europe, 2017, v. 30, n. 5, p. 232

By:

Vehus, Tore;
Waaler, Jo;
Krauss, Stefan;
Lundanes, Elsa;
Wilson, Steven Ray

Publication type:

Article

Data-driven prediction of adverse drug reactions induced by drug-drug interactions.

Published in:

BMC Pharmacology & Toxicology, 2017, v. 18, p. 1, doi. 10.1186/s40360-017-0153-6

By:

Ruifeng Liu;
AbdulHameed, Mohamed Diwan M.;
Kumar, Kamal;
Xueping Yû;
Wallqvist, Anders;
Reifman, Jaques

Publication type:

Article

FLEXc: protein flexibility prediction using context-based statistics, predicted structural features, and sequence information.

Published in:

2016

By:

Yaseen, Ashraf;
Nijim, Mais;
Williams, Brandon;
Lei Qian;
Min Li;
Jianxin Wang;
Yaohang Li

Publication type:

Abstract

Modeling the functional state of the reverse transcriptase of hepatitis B virus and its application to probing drug-protein interaction.

Published in:

BMC Bioinformatics, 2016, v. 17, p. 583, doi. 10.1186/s12859-016-1116-4

By:

Xiaojun Xu;
Hong Thai;
Kitrinos, Kathryn M.;
Guoliang Xia;
Gaggar, Anuj;
Paulson, Matthew;
Ganova-Raeva, Lilia;
Khudyakov, Yury;
Lara, James

Publication type:

Article

A Quantitative High-Resolution Genetic Profile Rapidly Identifies Sequence Determinants of Hepatitis C Viral Fitness and Drug Sensitivity.

Published in:

PLoS Pathogens, 2014, v. 10, n. 4, p. 1, doi. 10.1371/journal.ppat.1004064

By:

Qi, Hangfei;
Olson, C. Anders;
Wu, Nicholas C.;
Ke, Ruian;
Loverdo, Claude;
Chu, Virginia;
Truong, Shawna;
Remenyi, Roland;
Chen, Zugen;
Du, Yushen;
Su, Sheng-Yao;
Al-Mawsawi, Laith Q.;
Wu, Ting-Ting;
Chen, Shu-Hua;
Lin, Chung-Yen;
Zhong, Weidong;
Lloyd-Smith, James O.;
Sun, Ren

Publication type:

Article

The Surprising Importance of Peptide Bond Contacts in Drug-Protein Interactions.

Published in:

Chemistry - A European Journal, 2017, v. 23, n. 33, p. 7887, doi. 10.1002/chem.201701031

By:

Parrish, Robert M.;
Sitkoff, Doree F.;
Cheney, Daniel L.;
Sherrill, C. David

Publication type:

Article

Indirect study of non-covalent protein complexes by MALDI mass spectrometry: Origins, advantages, and applications of the 'intensity-fading' approach.

Published in:

Mass Spectrometry Reviews, 2016, v. 35, n. 5, p. 559, doi. 10.1002/mas.21480

By:

Downard, Kevin M.

Publication type:

Article

Current limitations and future opportunities for prediction of DILI from in vitro.

Published in:

Archives of Toxicology, 2017, v. 91, n. 1, p. 131, doi. 10.1007/s00204-016-1874-9

By:

Funk, Christoph;
Roth, Adrian

Publication type:

Article

Molecular docking study of Cytochalasin H and Fascin interactions as prospective targets for gastric cancer.

Published in:

Jorjani Biomedicine Journal, 2023, v. 11, n. 4, p. 8, doi. 10.61186/jorjanibiomedj.11.4.8

By:

Heidarzadeh, Samaneh;
Ashrafmansouri, Seyedeh-Samira

Publication type:

Article

Estimation of Maximum Recommended Therapeutic Dose Using Predicted Promiscuity and Potency.

Published in:

CTS: Clinical & Translational Science, 2016, v. 9, n. 6, p. 311, doi. 10.1111/cts.12422

By:

Liu, T;
Oprea, T;
Ursu, O;
Hasselgren, C;
Altman, RB

Publication type:

Article

Exploiting large-scale drug-protein interaction information for computational drug repurposing.

Published in:

BMC Bioinformatics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2105-15-210

By:

Ruifeng Liu;
Singh, Narender;
Tawa, Gregory J.;
Wallqvist, Anders;
Reifman, Jaques

Publication type:

Article

Exploring Drug Targets in Isoprenoid Biosynthetic Pathway for Plasmodium falciparum.

Published in:

Biochemistry Research International, 2014, p. 1, doi. 10.1155/2014/657189

By:

Qidwai, Tabish;
Jamal, Farrukh;
Khan, Mohd Y.;
Sharma, Bechan

Publication type:

Article

Using the drug-protein interactome to identify anti-ageing compounds for humans.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 01, p. 1, doi. 10.1371/journal.pcbi.1006639

By:

Fuentealba, Matías;
Dönertaş, Handan Melike;
Williams, Rhianna;
Labbadia, Johnathan;
Thornton, Janet M.;
Partridge, Linda

Publication type:

Article

Diverse cutaneous side effects associated with BRAF inhibitor therapy: a clinicopathologic study.

Published in:: Current Medical Literature: Dermatology, 2012, v. 17, n. 3, p. 79
Publication type:: Article

Sulfadiazine binds and unfolds bovine serum albumin: an in vitro study.

Published in:

Molecular Biology Reports, 2013, v. 40, n. 11, p. 6081, doi. 10.1007/s11033-013-2719-8

By:

Ali, Mohd.;
Al-Lohedan, Hamad

Publication type:

Article