Works matching DE "PROKARYOTE genetics"

Results: 81

Segmental Helical Motions and Dynamical Asymmetry Modulate Histidine Kinase Autophosphorylation.

Published in:

PLoS Biology, 2014, v. 12, n. 1, p. 1, doi. 10.1371/journal.pbio.1001776

By:

Mechaly, Ariel E.;
Sassoon, Nathalie;
Betton, Jean-Michel;
Alzari, Pedro M.

Publication type:

Article

Urinary extracellular vesicles for RNA extraction: optimization of a protocol devoid of prokaryote contamination.

Published in:

Journal of Extracellular Vesicles, 2016, v. 5, p. 1, doi. 10.3402/jev.v5.30281

By:

Tataruch-Weinert, Dorota;
Musante, Luca;
Kretz, Oliver;
Holthofer, Harry

Publication type:

Article

Metabolic pathway engineering using the central signal processor P<sub>II</sub>.

Published in:

Microbial Cell Factories, 2015, v. 14, p. 1, doi. 10.1186/s12934-015-0384-4

By:

Watzer, Björn;
Engelbrecht, Alicia;
Hauf, Waldemar;
Stahl, Mark;
Maldener, Iris;
Forchhammer, Karl

Publication type:

Article

Costs and benefits of natural transformation in Acinetobacter baylyi.

Published in:

BMC Microbiology, 2017, v. 17, p. 1, doi. 10.1186/s12866-017-0953-2

By:

Hülter, Nils;
Sørum, Vidar;
Borch-Pedersen, Kristina;
Liljegren, Mikkel M.;
Utnes, Ane L. G.;
Primicerio, Raul;
Harms, Klaus;
Johnsen, Pål J.

Publication type:

Article

Quantitative mapping of DNA phosphorothioatome reveals phosphorothioate heterogeneity of low modification frequency.

Published in:

PLoS Genetics, 2019, v. 15, n. 4, p. 1, doi. 10.1371/journal.pgen.1008026

By:

Li, Jinli;
Chen, Yi;
Zheng, Tao;
Kong, Lingxin;
Zhu, Sucheng;
Sun, Yihua;
Deng, Zixin;
Yang, Litao;
You, Delin

Publication type:

Article

Horizontal Gene Transfer Building Prokaryote Genomes: Genes Related to Exchange Between Cell and Environment are Frequently Transferred.

Published in:

Journal of Molecular Evolution, 2018, v. 86, n. 3/4, p. 190, doi. 10.1007/s00239-018-9836-x

By:

Paquola, Apuã C. M.;
Asif, Huma;
Pereira, Carlos Alberto de Bragança;
Feltes, Bruno César;
Bonatto, Diego;
Lima, Wanessa Cristina;
Menck, Carlos Frederico Martins

Publication type:

Article

Mechanisms of Evolutionary Innovation Point to Genetic Control Logic as the Key Difference Between Prokaryotes and Eukaryotes.

Published in:

Journal of Molecular Evolution, 2015, v. 81, n. 1/2, p. 34, doi. 10.1007/s00239-015-9688-6

By:

Bains, William;
Schulze-Makuch, Dirk

Publication type:

Article

The Non-Biological Meaning of the Term 'Prokaryote' and Its Implications.

Published in:

2015

By:

Di Giulio, Massimo

Publication type:

Letter

Evolution of Prokaryotic Genes by Shift of Stop Codons.

Published in:

Journal of Molecular Evolution, 2011, v. 72, n. 2, p. 138, doi. 10.1007/s00239-010-9408-1

By:

Vakhrusheva, Anna A.;
Kazanov, Marat D.;
Mironov, Andrey A.;
Bazykin, Georgii A.

Publication type:

Article

Role of Everlasting Triplet Expansions in Protein Evolution.

Published in:

Journal of Molecular Evolution, 2011, v. 72, n. 2, p. 232, doi. 10.1007/s00239-010-9425-0

By:

Koren, Zohar;
Trifonov, Edward N.

Publication type:

Article

Packaging of Dinoroseobacter shibae DNA into Gene Transfer Agent Particles Is Not Random.

Published in:

Genome Biology & Evolution, 2018, v. 10, n. 1, p. 359, doi. 10.1093/gbe/evy005

By:

Tomasch, Jürgen;
Hui Wang;
Hall, April T. K.;
Patzelt, Diana;
Preusse, Matthias;
Petersen, Jörn;
Brinkmann, Henner;
Bunk, Boyke;
Bhuju, Sabin;
Jarek, Michael;
Geffers, Robert;
Lang, Andrew S.;
Wagner-Döbler, Irene

Publication type:

Article

Conserved Proteins of the RNA Interference System in the ArbuscularMycorrhizal Fungus Rhizoglomus irregulare Provide New Insight into the Evolutionary History of Glomeromycota.

Published in:

Genome Biology & Evolution, 2018, v. 10, n. 1, p. 328, doi. 10.1093/gbe/evy002

By:

Soon-Jae Lee;
Kong, Mengxuan;
Harrison, Paul;
Hijri, Mohamed

Publication type:

Article

Genetic Competence Drives Genome Diversity in Bacillus subtilis.

Published in:

Genome Biology & Evolution, 2018, v. 10, n. 1, p. 108, doi. 10.1093/gbe/evx270

By:

Brito, Patrícia H.;
Chevreux, Bastien;
Serra, Cláudia R.;
Schyns, Ghislain;
Henriques, Adriano O.;
Pereira-Leal, José B.

Publication type:

Article

The Evolution of COP9 Signalosome in Unicellular and Multicellular Organisms.

Published in:

Genome Biology & Evolution, 2016, v. 8, n. 4, p. 1279, doi. 10.1093/gbe/evw073

By:

Barth, Emanuel;
Hübler, Ron;
Baniahmad, Aria;
Marz, Manja

Publication type:

Article

Evolution and Diversity of the Ras Superfamily of Small GTPases in Prokaryotes.

Published in:

Genome Biology & Evolution, 2014, v. 7, n. 1, p. 57, doi. 10.1093/gbe/evu264

By:

Wuichet, Kristin;
Søgaard-Andersen, Lotte

Publication type:

Article

Gene Frequency Distributions Reject a Neutral Model of Genome Evolution.

Published in:

Genome Biology & Evolution, 2013, v. 5, n. 1, p. 233, doi. 10.1093/gbe/evt002

By:

Lobkovsky, Alexander E.;
Wolf, Yuri I.;
Koonin, Eugene V.

Publication type:

Article

Genomes of Stigonematalean Cyanobacteria (Subsection V) and the Evolution of Oxygenic Photosynthesis from Prokaryotes to Plastids.

Published in:

Genome Biology & Evolution, 2013, v. 5, n. 1, p. 31, doi. 10.1093/gbe/evs117

By:

Dagan, Tal;
Roettger, Mayo;
Stucken, Karina;
Landan, Giddy;
Koch, Robin;
Major, Peter;
Gould, Sven B.;
Goremykin, Vadim V.;
Rippka, Rosmarie;
Tandeau de Marsac, Nicole;
Gugger, Muriel;
Lockhart, Peter J.;
Allen, John F.;
Brune, Iris;
Maus, Irena;
Pühler, Alfred;
Martin, William F.

Publication type:

Article

COBRApy: COnstraints-Based Reconstruction and Analysis for Python.

Published in:

BMC Systems Biology, 2013, v. 7, n. 1, p. 1, doi. 10.1186/1752-0509-7-74

By:

Ebrahim, Ali;
Lerman, Joshua A;
Palsson, Bernhard O;
Hyduke, Daniel R

Publication type:

Article

CpG oligonucleotides bind TLR9 and RRM-Containing proteins in Atlantic Salmon (Salmo salar).

Published in:

BMC Immunology, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2172-14-12

By:

Iliev, Dimitar B.;
Skjæveland, Ingrid;
Jørgensen, Jorunn B.

Publication type:

Article

CRISPRDetect: A flexible algorithm to define CRISPR arrays.

Published in:

BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2627-0

By:

Biswas, Ambarish;
Staals, Raymond H. J.;
Morales, Sergio E.;
Fineran, Peter C.;
Brown, Chris M.

Publication type:

Article

A comparative genomics study on the effect of individual amino acids on ribosome stalling.

Published in:

BMC Genomics, 2015, v. 16, p. 1, doi. 10.1186/1471-2164-16-S10-S5

By:

Sabi, Renana;
Tuller, Tamir

Publication type:

Article

A database for the taxonomic and phylogenetic identification of the genus Bradyrhizobium using multilocus sequence analysis.

Published in:

BMC Genomics, 2015, v. 16, p. 1, doi. 10.1186/1471-2164-16-S5-S10

By:

Azevedo, Helton;
Lopes, Fabricio Martins;
Silla, Paulo Roberto;
Hungria, Mariangela

Publication type:

Article

A natural barrier to lateral gene transfer from prokaryotes to eukaryotes revealed from genomes: the 70 % rule.

Published in:

BMC Biology, 2016, v. 14, p. 1, doi. 10.1186/s12915-016-0315-9

By:

Chuan Ku;
Martin, William F.

Publication type:

Article

First structure of archaeal branched-chain amino acid aminotransferase from Thermoproteus uzoniensis specific for l-amino acids and R-amines.

Published in:

Extremophiles, 2016, v. 20, n. 2, p. 215, doi. 10.1007/s00792-016-0816-z

By:

Boyko, Konstantin;
Nikolaeva, Alena;
Popov, Vladimir;
Stekhanova, Tatiana;
Bezsudnova, Ekaterina;
Mardanov, Andrey;
Rakitin, Andrey;
Ravin, Nikolai

Publication type:

Article

Considerations on bacterial nucleoids.

Published in:

Applied Microbiology & Biotechnology, 2017, v. 101, n. 14, p. 5591, doi. 10.1007/s00253-017-8381-7

By:

Feijoo-Siota, Lucía;
Rama, José;
Sánchez-Pérez, Angeles;
Villa, Tomás

Publication type:

Article

Bacteriophage recombination systems and biotechnical applications.

Published in:

Applied Microbiology & Biotechnology, 2014, v. 98, n. 7, p. 2841, doi. 10.1007/s00253-014-5512-2

By:

Nafissi, Nafiseh;
Slavcev, Roderick

Publication type:

Article

Functional genes ( dsr) approach reveals similar sulphidogenic prokaryotes diversity but different structure in saline waters from corroding high temperature petroleum reservoirs.

Published in:

Applied Microbiology & Biotechnology, 2014, v. 98, n. 4, p. 1871, doi. 10.1007/s00253-013-5152-y

By:

Guan, Jing;
Zhang, Bing-Liang;
Mbadinga, Serge;
Liu, Jin-Feng;
Gu, Ji-Dong;
Mu, Bo-Zhong

Publication type:

Article

Genomic and functional adaptation in surface ocean planktonic prokaryotes.

Published in:

Nature, 2010, v. 468, n. 7320, p. 60, doi. 10.1038/nature09530

By:

Yooseph, Shibu;
Nealson, Kenneth H.;
Rusch, Douglas B.;
McCrow, John P.;
Dupont, Christopher L.;
Kim, Maria;
Johnson, Justin;
Montgomery, Robert;
Ferriera, Steve;
Beeson, Karen;
Williamson, Shannon J.;
Tovchigrechko, Andrey;
Allen, Andrew E.;
Zeigler, Lisa A.;
Sutton, Granger;
Eisenstadt, Eric;
Rogers, Yu-Hui;
Friedman, Robert;
Frazier, Marvin;
Venter, J. Craig

Publication type:

Article

Cytoplasmic sulfur trafficking in sulfur-oxidizing prokaryotes.

Published in:

IUBMB Life, 2015, v. 67, n. 4, p. 268, doi. 10.1002/iub.1371

By:

Dahl, Christiane

Publication type:

Article

Diversity of cyanobacteria in biological crusts on arid soils in the Eastern region of India and their molecular phylogeny.

Published in:

Current Science (00113891), 2016, v. 110, n. 10, p. 1999, doi. 10.18520/cs/v110/i10/1999-2004

By:

Kumar, Dhanesh;
Kaštánek, Petr;
Adhikary, Siba P.

Publication type:

Article

Birth, Death, and Diversification of Mobile Promoters in Prokaryotes.

Published in:

Genetics, 2014, v. 197, n. 1, p. 291, doi. 10.1534/genetics.114.162883

By:

van Passel, Mark W. J.;
Nijveen, Harm;
Wahl, Lindi M.

Publication type:

Article

Actinomycete complexes in soils of industrial and residential zones in the city of Kirov.

Published in:

Eurasian Soil Science, 2014, v. 47, n. 2, p. 89, doi. 10.1134/S1064229313100062

By:

Shirokikh, I.;
Solov'eva, E.;
Ashikhmina, T.

Publication type:

Article

Protein Localization Analysis of Essential Genes in Prokaryotes.

Published in:

Scientific Reports, 2014, p. 1, doi. 10.1038/srep06001

By:

Chong Peng;
Feng Gao

Publication type:

Article

Fungal and Prokaryotic Activities in the Marine Subsurface Biosphere at Peru Margin and Canterbury Basin Inferred from RNA-Based Analyses and Microscopy.

Published in:

Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.00846

By:

Pachiadaki, Maria G.;
Rédou, Vanessa;
Beaudoin, David J.;
Burgaud, Gaëtan;
Edgcomb, Virginia P.;
Sylvan, Jason B.;
Yuriko Nagano

Publication type:

Article

Too Much Eukaryote LGT.

Published in:

BioEssays, 2017, v. 39, n. 12, p. n/a, doi. 10.1002/bies.201700115

By:

Martin, William F.

Publication type:

Article

Evolution of dynamin: Modular design of a membrane remodeling machine.

Published in:

2015

By:

Bramkamp, Marc

Publication type:

Opinion

Nanomechanics of superbugs and superdrugs: new frontiers in nanomedicine.

Published in:

Biochemical Society Transactions, 2012, v. 40, n. 4, p. 603, doi. 10.1042/BST20120082

By:

McKendry, Rachel A.

Publication type:

Article

Prokaryotic expression and mechanism of action of α-helical antimicrobial peptide A20L using fusion tags.

Published in:

BMC Biotechnology, 2015, v. 15, n. 1, p. 1, doi. 10.1186/s12896-015-0189-x

By:

Tonghui Yi;
Shiyu Sun;
Yibing Huang;
Yuxin Chen

Publication type:

Article

CRISPR-Cas immunity in prokaryotes.

Published in:

Nature, 2015, v. 526, n. 7571, p. 55, doi. 10.1038/nature15386

By:

Marraffini, Luciano A.

Publication type:

Article

Pangenomic Definition of Prokaryotic Species and the Phylogenetic Structure of Prochlorococcus spp.

Published in:

Frontiers in Microbiology, 2018, p. 1, doi. 10.3389/fmicb.2018.00428

By:

Moldovan, Mikhail A.;
Gelfand, Mikhail S.

Publication type:

Article

The DNA Methylome of the Hyperthermoacidophilic Crenarchaeon Sulfolobus acidocaldarius.

Published in:

Frontiers in Microbiology, 2018, p. 1, doi. 10.3389/fmicb.2018.00137

By:

Couturier, Mohea;
Lindås, Ann-Christin

Publication type:

Article

Survival and Evolution of CRISPR–Cas System in Prokaryotes and Its Applications.

Published in:

Frontiers in Immunology, 2016, p. 1, doi. 10.3389/fimmu.2016.00375

By:

Bakr Shabbir, Muhammad Abu;
Haihong Hao;
Hussain, Hafiz Iftikhar;
Iqbal, Zahid;
Ahmed, Saeed;
Jun Li;
Zonghui Yuan;
Shabbir, Muhammad Zubair;
Sattar, Adeel;
Iqbal, Mujahid

Publication type:

Article

ToNER: A tool for identifying nucleotide enrichment signals in feature-enriched RNA-seq data.

Published in:

PLoS ONE, 2017, v. 12, n. 5, p. 1, doi. 10.1371/journal.pone.0178483

By:

Promworn, Yuttachon;
Kaewprommal, Pavita;
Shaw, Philip J.;
Intarapanich, Apichart;
Tongsima, Sissades;
Piriyapongsa, Jittima

Publication type:

Article

PanWeb: A web interface for pan-genomic analysis.

Published in:

PLoS ONE, 2017, v. 12, n. 5, p. 1, doi. 10.1371/journal.pone.0178154

By:

Pantoja, Yan;
Pinheiro, Kenny;
Veras, Allan;
Araújo, Fabrício;
Lopes de Sousa, Ailton;
Guimarães, Luis Carlos;
Silva, Artur;
Ramos, Rommel T. J.

Publication type:

Article

Prokaryotic Expression and Anti-IBDV Activity of Chicken Interleukin-18 and Interferon-γ.

Published in:

Cytogenetic & Genome Research, 2018, v. 153, n. 1, p. 36, doi. 10.1159/000481522

By:

Song, Baifen;
Li, Xiaoting;
Ma, Jinzhu;
Yu, Liquan;
Feng, Zhenyue;
Liu, Zhenhua;
Cui, Yudong

Publication type:

Article

Dynamics of Viral Abundance and Diversity in a Sphagnum-Dominated Peatland: Temporal Fluctuations Prevail Over Habitat.

Published in:

Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2015.01494

By:

Ballaud, Flore;
Dufresne, Alexis;
Francez, André-Jean;
Colombet, Jonathan;
Sime-Ngando, Télesphore;
Quaiser, Achim

Publication type:

Article

Rational design of highly active sgRNAs for CRISPR-Cas9-mediated gene inactivation.

Published in:

Nature Biotechnology, 2014, v. 32, n. 12, p. 1262, doi. 10.1038/nbt.3026

By:

Doench, John G;
Hartenian, Ella;
Graham, Daniel B;
Hegde, Mudra;
Smith, Ian;
Sullender, Meagan;
Root, David E;
Tothova, Zuzana;
Ebert, Benjamin L;
Xavier, Ramnik J

Publication type:

Article

Characteristic Variations and Similarities in Biochemical, Molecular, and Functional Properties of Glyoxalases across Prokaryotes and Eukaryotes.

Published in:

International Journal of Molecular Sciences, 2017, v. 18, n. 4, p. 250, doi. 10.3390/ijms18040250

By:

Kaur, Charanpreet;
Sharma, Shweta;
Hasan, Mohammad Rokebul;
Pareek, Ashwani;
Singla-Pareek, Sneh L.;
Sopory, Sudhir K.

Publication type:

Article

DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication.

Published in:

Bioinformatics, 2018, v. 34, n. 6, p. 1037, doi. 10.1093/bioinformatics/btx713

By:

Tanizawa, Yasuhiro;
Fujisawa, Takatomo;
Nakamura, Yasukazu

Publication type:

Article

ISQuest: finding insertion sequences in prokaryotic sequence fragment data.

Published in:

Bioinformatics, 2015, v. 31, n. 21, p. 3406, doi. 10.1093/bioinformatics/btv388

By:

Biswas, Abhishek;
Gauthier, David T.;
Ranjan, Desh;
Zubair, Mohammad

Publication type:

Article