Works matching DE "POSITION effect (Genetics)"

Results: 78

Detect differentially methylated regions using non-homogeneous hidden Markov model for methylation array data.

Published in:

Bioinformatics, 2017, v. 33, n. 23, p. 3701, doi. 10.1093/bioinformatics/btx467

By:

Linghao Shen;
Jun Zhu;
Shuo-Yen Robert Li;
Xiaodan Fan

Publication type:

Article

Differential regulation enrichment analysis via the integration of transcriptional regulatory network and gene expression data.

Published in:

Bioinformatics, 2015, v. 31, n. 4, p. 563, doi. 10.1093/bioinformatics/btu672

By:

Ma, Shining;
Jiang, Tao;
Jiang, Rui

Publication type:

Article

Predicting protein phosphorylation from gene expression: top methods from the IMPROVER Species Translation Challenge.

Published in:

Bioinformatics, 2015, v. 31, n. 4, p. 462, doi. 10.1093/bioinformatics/btu490

By:

Dayarian, Adel;
Romero, Roberto;
Wang, Zhiming;
Biehl, Michael;
Bilal, Erhan;
Hormoz, Sahand;
Meyer, Pablo;
Norel, Raquel;
Rhrissorrakrai, Kahn;
Bhanot, Gyan;
Luo, Feng;
Tarca, Adi L.

Publication type:

Article

A Proposed Paper on Gene Expression with PSO and k-mean.

Published in:

International Journal of System & Software Engineering, 2016, v. 4, n. 2, p. 15

By:

Shakya, Somesh;
Atre, Anshul

Publication type:

Article

Relapsed anaplastic lymphoma kinase-positive large B-cell lymphoma expressed cluster of differentiation 4 and cytokeratin: An initially misdiagnosed case corrected by immunoglobulin κ locus gene rearrangement detection.

Published in:

Oncology Letters, 2017, v. 14, n. 1, p. 787, doi. 10.3892/ol.2017.6180

By:

YUNFEI SHI;
XIANGHONG LI;
LIXIN ZHOU;
QIN FENG;
PING WANG;
YANHUA BAI;
YUMEI LAI;
YUQIN SONG;
CHEN ZHANG;
WEIPING LIU

Publication type:

Article

Virulence factors, antimicrobial resistance patterns, and genetic characteristics of hydrogen sulfide-producing Escherichia coli isolated from swine.

Published in:

Korean Journal of Veterinary Research, 2015, v. 55, n. 3, p. 191, doi. 10.14405/kjvr.2015.55.3.191

By:

Hyun-Eui Park;
Min-Kyoung Shin;
Hong-Tae Park;
Seung Won Shin;
Myunghwan Jung;
Young Bin Im;
Han Sang Yoo

Publication type:

Article

Expected influence of linkage disequilibrium on genetic variance caused by dominance and epistasis on quantitative traits.

Published in:

Journal of Animal Breeding & Genetics, 2015, v. 132, n. 2, p. 176, doi. 10.1111/jbg.12140

By:

Hill, W.G.;
Mäki ‐ Tanila, A.

Publication type:

Article

Transcriptomics and physiological analyses reveal co-ordinated alteration of metabolic pathways in Jatropha curcas drought tolerance.

Published in:

Journal of Experimental Botany, 2016, v. 67, n. 3, p. 845, doi. 10.1093/jxb/erv499

By:

Sapeta, Helena;
Lourenço, Tiago;
Lorenz, Stefan;
Grumaz, Christian;
Kirstahler, Philipp;
Barros, Pedro M.;
Costa, Joaquim Miguel;
Sohn, Kai;
Oliveira, M. Margarida

Publication type:

Article

Alternative Splicing Profile and Sex-Preferential Gene Expression in the Female and Male Pacific Abalone Haliotis discus hannai.

Published in:

Genes, 2017, v. 8, n. 3, p. 99, doi. 10.3390/genes8030099

By:

Mi Ae Kim;
Jae-Sung Rhee;
Tae Ha Kim;
Jung Sick Lee;
Ah-Young Choi;
Beom-Soon Choi;
Ik-Young Choi;
Young Chang Sohn

Publication type:

Article

Adopting gene expression programming to generate extension strategies for incompatible problem.

Published in:

Neural Computing & Applications, 2017, v. 28, n. 9, p. 2649, doi. 10.1007/s00521-016-2211-1

By:

Tang, Long;
Yang, Chunyan;
Li, Weihua

Publication type:

Article

Investigating the expression of F10 and G11 xylanases in Aspergillus niger A09 with qPCR.

Published in:

Canadian Journal of Microbiology, 2016, v. 62, n. 9, p. 744, doi. 10.1139/cjm-2015-0394

By:

Cui, Shixiu;
Wang, Tianwen;
Hu, Hong;
Liu, Liangwei;
Song, Andong;
Chen, Hongge

Publication type:

Article

Global gene expression in granulosa cells of growing, plateau and atretic dominant follicles in cattle.

Published in:

Reproductive Biology & Endocrinology, 2015, v. 13, n. 1, p. 1, doi. 10.1186/s12958-015-0010-7

By:

Girard, Annie;
Dufort, Isabelle;
Douville, Gabriel;
Sirard, Marc-André

Publication type:

Article

IL7R gene expression network associates with human healthy ageing.

Published in:

Immunity & Ageing, 2015, p. 1, doi. 10.1186/s12979-015-0048-6

By:

Passtoors, Willemijn M.;
van den Akker, Erik B.;
Deelen, Joris;
Maier, Andrea B.;
van der Breggen, Ruud;
Jansen, Rick;
Trompet, Stella;
van Heemst, Diana;
Derhovanessian, Evelyna;
Pawelec, Graham;
van Ommen, Gert-Jan B.;
Slagboom, P. Eline;
Beekman, Marian

Publication type:

Article

Time-plans of the organisms: Jakob von Uexküll's explorations into the temporal constitution of living beings.

Published in:

Sign Systems Studies, 2011, v. 39, n. 2-4, p. 37, doi. 10.12697/SSS.2011.2-4.03

By:

Magnus, Riin

Publication type:

Article

Mutations in CG8878, a Novel Putative Protein Kinase, Enhance P Element Dependent Silencing (PDS) and Position Effect Variegation (PEV) in Drosophila melanogaster.

Published in:

PLoS ONE, 2014, v. 9, n. 3, p. 1, doi. 10.1371/journal.pone.0071695

By:

McCracken, Allen;
Locke, John

Publication type:

Article

Optimisation of RNA interference-mediated gene silencing in Helicoverpa armigera.

Published in:

Austral Entomology, 2014, v. 53, n. 1, p. 83, doi. 10.1111/aen.12052

By:

Jing Yang;
Zhao-jun Han

Publication type:

Article

A structural equation modeling approach for examining position effects in large-scale assessments.

Published in:

Large-scale Assessments in Education, 2017, v. 5, n. 1, p. 1, doi. 10.1186/s40536-017-0042-x

By:

Bulut, Okan;
Quo, Qi;
Gierl, Mark

Publication type:

Article

Epigenetic modulation during hippocampal development.

Published in:

Biomedical Reports, 2018, v. 9, n. 6, p. 463, doi. 10.3892/br.2018.1160

By:

Fan, Si-Jing;
Sun, An-Bang;
Liu, Lian

Publication type:

Article

Epigenetics of oral and oropharyngeal cancers.

Published in:

Biomedical Reports, 2018, v. 9, n. 4, p. 275, doi. 10.3892/br.2018.1136

By:

Russo, Daniela;
Merolla, Francesco;
Varricchio, Silvia;
Salzano, Giovanni;
Zarrilli, Giovanni;
Mascolo, Massimo;
Strazzullo, Viviana;
Di Crescenzo, Rosa Maria;
Celetti, Angela;
Ilardi, Gennaro

Publication type:

Article

Effect of light on global gene expression in the neuroglobin-deficient mouse retina.

Published in:

Biomedical Reports, 2014, v. 2, n. 6, p. 780, doi. 10.3892/br.2014.364

By:

ILMJÄRV, STEN;
REIMETS, RIIN;
ANSGAR=HUNDAHL, CHRISTIAN;
LUUK, HENDRIK

Publication type:

Article

Cold Hardiness in Trees: A Mini-Review.

Published in:

Frontiers in Plant Science, 2018, p. N.PAG, doi. 10.3389/fpls.2018.01394

By:

Wisniewski, Michael;
Nassuth, Annette;
Arora, Rajeev

Publication type:

Article

OmpR, a response regulator of the two-component signal transduction pathway, influences inv gene expression in Yersinia enterocolitica O9.

Published in:

Frontiers in Cellular & Infection Microbiology, 2012, v. 2, n. 12, p. 1, doi. 10.3389/fcimb.2012.00153

By:

Brzóstkowska, Marta;
Raczkowska, Adrianna;
Brzostek, Katarzyna

Publication type:

Article

The transcriptional landscape of seasonal coat colour moult in the snowshoe hare.

Published in:

Molecular Ecology, 2017, v. 26, n. 16, p. 4173, doi. 10.1111/mec.14177

By:

Ferreira, Mafalda S.;
Alves, Paulo C.;
Callahan, Colin M.;
Marques, João P.;
Mills, L. Scott;
Good, Jeffrey M.;
Melo‐Ferreira, José

Publication type:

Article

Ambient temperature-mediated changes in hepatic gene expression of a mammalian herbivore ( Neotoma lepida).

Published in:

Molecular Ecology, 2017, v. 26, n. 16, p. 4322, doi. 10.1111/mec.14192

By:

Connors, Patrice Kurnath;
Malenke, Jael R.;
Dearing, M. Denise

Publication type:

Article

Inferring regulatory change from gene expression: the confounding effects of tissue scaling.

Published in:

Molecular Ecology, 2016, v. 25, n. 20, p. 5114, doi. 10.1111/mec.13824

By:

Montgomery, Stephen H.;
Mank, Judith E.

Publication type:

Article

Correlation of Adrenomedullin gene expression in peripheral blood leukocytes with severity of ischemic stroke.

Published in:

International Journal of Neuroscience, 2014, v. 124, n. 4, p. 271, doi. 10.3109/00207454.2013.837462

By:

Liu, Jia;
Yan, Jun;
Greer, Judith M;
Read, Stephen J;
Henderson, Robert D;
Rose, Stephen E;
Coulthard, Alan;
McCombe, Pamela A

Publication type:

Article

A Study of Interleukin-2 Production and Nck Adaptor Molecule Gene Expression in Systemic Lupus Erythematosus Patients.

Published in:

Journal of the Medical Association of Thailand, 2017, v. 100, n. 4, p. 396

By:

Patapong Towiwat;
Bodin Buttham

Publication type:

Article

Dynamics and stability: epigenetic conversions in position effect variegation1.

Published in:

Biochemistry & Cell Biology, 2013, v. 91, n. 1, p. 6, doi. 10.1139/bcb-2012-0048

By:

Yankulov, Krassimir

Publication type:

Article

Grammar-based compression approach to extraction of common rules among multiple trees of glycans and RNAs.

Published in:

BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0558-4

By:

Yang Zhao;
Morihiro Hayashida;
Yue Cao;
Jaewook Hwang;
Tatsuya Akutsu

Publication type:

Article

Deep convolutional neural networks for annotating gene expression patterns in the mouse brain.

Published in:

BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0553-9

By:

Tao Zeng;
Rongjian Li;
Ravi Mukkamala;
Jieping Ye;
Shuiwang Ji

Publication type:

Article

Application of the fractional-stable distributions for approximation of the gene expression profiles.

Published in:

Statistical Applications in Genetics & Molecular Biology, 2015, v. 14, n. 3, p. 295, doi. 10.1515/sagmb-2014-0094

By:

Saenko, Viacheslav;
Saenko, Yury

Publication type:

Article

Characterization and constitutive expression of a novel endo-1,4-β- d-xylanohydrolase from Aspergillus niger in Pichia pastoris.

Published in:

Biotechnology Letters, 2013, v. 35, n. 9, p. 1433, doi. 10.1007/s10529-013-1220-8

By:

Zheng, Jia;
Guo, Ning;
Wu, Lishuang;
Tian, Jian;
Zhou, Hongbo

Publication type:

Article

Variation in Position Effect Variegation Within a Natural Population.

Published in:

Genetics, 2017, v. 207, n. 3, p. 1157, doi. 10.1534/genetics.117.300306

By:

Kelsey, Keegan J. P.;
Clark, Andrew G.

Publication type:

Article

An Efficient FLP-Based Toolkit for Spatiotemporal Control of Gene Expression in Caenorhabditis elegans.

Published in:

Genetics, 2017, v. 206, n. 4, p. 1763, doi. 10.1534/genetics.117.201012

By:

Muñoz-Jiménez, Celia;
Ayuso, Cristina;
Dobrzynska, Agnieszka;
Torres-Mendéz, Antonio;
de la Cruz Ruiz, Patricia;
Askjaer, Peter

Publication type:

Article

The Differences Between Cis- and Trans-Gene Inactivation Caused by Heterochromatin in Drosophila.

Published in:

Genetics, 2016, v. 202, n. 1, p. 93, doi. 10.1534/genetics.115.181693

By:

Abramov, Yuriy A.;
Shatskikh, Aleksei S.;
Maksimenko, Oksana G.;
Bonaccorsi, Silvia;
Gvozdev, Vladimir A.;
Lavrov, Sergey A.

Publication type:

Article

JIL-1 and Su(var)3-7 Interact Genetically and Counteract Each Other's Effect on Position-Effect Variegation in Drosophila.

Published in:

Genetics, 2010, v. 185, n. 4, p. 1183, doi. 10.1534/genetics.110.117150

By:

Huai Deng;
Weili Cai;
Chao Wang;
Lerach, Stephanie;
Delattre, Marion;
Girton, Jack;
Johansen, Jørgen;
Johansen, Kristen M.

Publication type:

Article

The gypsy Insulator of Drosophila melanogaster, Together With Its Binding Protein Suppressor of Hairy-Wing, Facilitate High and Precise Expression of Transgenes in Arabidopsis thaliana.

Published in:

Genetics, 2010, v. 185, n. 4, p. 1141, doi. 10.1534/genetics.110.117960

By:

Wenjing She;
Weiqiang Lin;
Yubin Zhu;
Yong Chen;
Weiyuan Jin;
Yanjun Yang;
Ning Han;
Hongwu Bian;
Muyuan Zhu;
Junhui Wang

Publication type:

Article

Gene Expression Mapping of Histone Deacetylases and Co-factors, and Correlation with Survival Time and 1H-HRMAS Metabolomic Profile in Human Gliomas.

Published in:

Scientific Reports, 2015, p. 9087, doi. 10.1038/srep09087

By:

Dali-Youcef, Nassim;
Froelich, Sébastien;
Moussallieh, François-Marie;
Chibbaro, Salvatore;
Noël, Georges;
Namer, Izzie J.;
Heikkinen, Sami;
Auwerx, Johan

Publication type:

Article

Comparative Transcriptome Analyses of Gene Expression Changes Triggered by Rhizoctonia solani AG1 IA Infection in Resistant and Susceptible Rice Varieties.

Published in:

Frontiers in Plant Science, 2017, p. 1, doi. 10.3389/fpls.2017.01422

By:

Jinfeng Zhang;
Lei Chen;
Chenglin Fu;
Lingxia Wang;
Huainian Liu;
Yuanzhi Cheng;
Shuangcheng Li;
Qiming Deng;
Shiquan Wang;
Jun Zhu;
Yueyang Liang;
Ping Li;
Aiping Zheng

Publication type:

Article

Genome-wide landscape of position effects on heterogeneous gene expression in Saccharomyces cerevisiae.

Published in:

Biotechnology for Biofuels, 2017, v. 10, p. 1, doi. 10.1186/s13068-017-0872-3

By:

Xiao-Le Wu;
Bing-Zhi Li;
Wen-Zheng Zhang;
Kai Song;
Hao Qi;
Jun-biao Dai;
Ying-Jin Yuan

Publication type:

Article

Further characterisation of differences between TL and AB zebrafish (Danio rerio): Gene expression, physiology and behaviour at day 5 of the larval stage.

Published in:

PLoS ONE, 2017, v. 12, n. 4, p. 1, doi. 10.1371/journal.pone.0175420

By:

van den Bos, Ruud;
Mes, Wouter;
Galligani, Pietro;
Heil, Anthony;
Zethof, Jan;
Flik, Gert;
Gorissen, Marnix

Publication type:

Article

Insulator Protein Helps Organize the Gaps in the Axon's Insulation.

Published in:

PLoS Biology, 2015, v. 13, n. 9, p. 1, doi. 10.1371/journal.pbio.1002259

By:

Robinson, Richard

Publication type:

Article

HDAC1/2-Dependent P0 Expression Maintains Paranodal and Nodal Integrity Independently of Myelin Stability through Interactions with Neurofascins.

Published in:

PLoS Biology, 2015, v. 13, n. 9, p. 1, doi. 10.1371/journal.pbio.1002258

By:

Brügger, Valérie;
Engler, Stefanie;
Pereira, Jorge A.;
Ruff, Sophie;
Horn, Michael;
Welzl, Hans;
Münger, Emmanuelle;
Vaquié, Adrien;
Sidiropoulos, Páris N. M.;
Egger, Boris;
Yotovski, Peter;
Filgueira, Luis;
Somandin, Christian;
Lühmann, Tessa C.;
D’Antonio, Maurizio;
Yamaguchi, Teppei;
Matthias, Patrick;
Suter, Ueli;
Jacob, Claire

Publication type:

Article

A benchmark of gene expression tissue-specificity metrics.

Published in:

Briefings in Bioinformatics, 2017, v. 18, n. 2, p. 205, doi. 10.1093/bib/bbw008

By:

Kryuchkova-Mostacci, Nadezda;
Robinson-Rechavi, Marc

Publication type:

Article

Coils spring into action: Cajal bodies and the genomic organization of transcription (comment DOI 10.1002/bies.201600144).

Published in:

BioEssays, 2016, v. 38, n. 12, p. 1190, doi. 10.1002/bies.201600232

By:

Fanslow, Danielle;
Kosak, Steven T.

Publication type:

Article

Reprogramming the genetic code: The emerging role of ribosomal frameshifting in regulating cellular gene expression.

Published in:

BioEssays, 2016, v. 38, n. 1, p. 21, doi. 10.1002/bies.201500131

By:

Advani, Vivek M.;
Dinman, Jonathan D.

Publication type:

Article

A new model based on gene expression programming to estimate air flow in a single rock joint.

Published in:

Environmental Earth Sciences, 2016, v. 75, n. 9, p. 1, doi. 10.1007/s12665-016-5524-6

By:

Khandelwal, Manoj;
Armaghani, Danial;
Faradonbeh, Roohollah;
Ranjith, P.;
Ghoraba, Saber

Publication type:

Article

The Effects of Low Level Laser Therapy on the Expression of Collagen Type I Gene and Proliferation of Human Gingival Fibroblasts (Hgf3-Pi 53): in vitro Study.

Published in:

Iranian Journal of Basic Medical Sciences, 2013, v. 16, n. 10, p. 1071

By:

Frozanfar, Ali;
Ramezani, Mohammad;
Rahpeyma, Amin;
Khajehahmadi, Saeedeh;
Arbab, Hamid Reza

Publication type:

Article

Juxtaposition of heterochromatic and euchromatic regions by chromosomal translocation mediates a heterochromatic long-range position effect associated with a severe neurological phenotype.

Published in:: Molecular Cytogenetics (17558166), 2012, v. 5, n. 1, p. 16, doi. 10.1186/1755-8166-5-16
Publication type:: Article

The Regulation of Uterine Proinflammatory Gene Expression during Pregnancy in the Live-Bearing Lizard, Pseudemoia entrecasteauxii.

Published in:

Journal of Experimental Zoology Part B: Molecular & Developmental Evolution, 2017, v. 328, n. 4, p. 334, doi. 10.1002/jez.b.22733

By:

Hendrawan, Kevin;
Whittington, Camilla M;
Brandley, Matthew C;
Belov, Katherine;
Thompson, Michael B

Publication type:

Article