Works matching DE "PLANT haplotypes"

Results: 140

Extensive spread of farmed seaweeds causes a shift from native to non-native haplotypes in natural seaweed beds.

Published in:

Marine Biology, 2015, v. 162, n. 10, p. 1983, doi. 10.1007/s00227-015-2724-7

By:

Tano, S.;
Halling, C.;
Lind, E.;
Buriyo, A.;
Wikström, S.

Publication type:

Article

Combining the least cost path method with population genetic data and species distribution models to identify landscape connectivity during the late Quaternary in Himalayan hemlock.

Published in:

Ecology & Evolution (20457758), 2015, v. 5, n. 24, p. 5781, doi. 10.1002/ece3.1840

By:

Haibin Yu;
Yili Zhang;
Linshan Liu;
Wei Qi;
Shicheng Li;
Zhongjun Hu

Publication type:

Article

Association between the MLX Interacting Protein-Like, BUD13 Homolog and Zinc Finger Protein 259 Gene Polymorphisms and Serum Lipid Levels.

Published in:

Scientific Reports, 2014, p. 1, doi. 10.1038/srep05565

By:

Lynn-Htet-Htet Aung;
Rui-Xing Yin;
Jin-Zhen Wu;
Dong-Feng Wu;
Wei Wang;
Hui Li

Publication type:

Article

Cd and Ni transport and accumulation in the halophyte Sesuvium portulacastrum: implication of organic acids in these processes.

Published in:

Frontiers in Plant Science, 2015, v. 6, p. 1, doi. 10.3389/fpls.2015.00156

By:

Mnasri, Mejda;
Ghabriche, Rim;
Fourati, Emna;
Zaier, Hanen;
Sabally, Kebba;
Barrington, Suzelle;
Lutts, Stanley;
Abdelly, Chedly;
Ghnaya, Tahar

Publication type:

Article

Introgression of a rare haplotype from Southeastern Africa to breed California blackeyes with larger seeds.

Published in:

Frontiers in Plant Science, 2015, v. 6, p. 1, doi. 10.3389/fpls.2015.00126

By:

Lucas, Mitchell R.;
Huynh, Bao-Lam;
Roberts, Philip A.;
Close, Timothy J.

Publication type:

Article

Genomic heterogeneity and structural variation in soybean near isogenic lines.

Published in:

Frontiers in Plant Science, 2013, v. 4, p. 1, doi. 10.3389/fpls.2013.00104

By:

Stec, Adrian O.;
Bhaskar, Pudota B.;
Bolon, Yung-Tsi;
Nolan, Rebecca;
Shoemaker, Randy C.;
Vance, Carroll P.;
Stupar, Robert M.

Publication type:

Article

Association studies and legume synteny reveal haplotypes determining seed size in Vigna unguiculata.

Published in:

Frontiers in Plant Science, 2013, v. 4, p. 1, doi. 10.3389/fpls.2013.00095

By:

Lucas, Mitchell R.;
Huynh, Bao-Lam;
Silva Vinholes, Patricia da;
Cisse, Ndiaga;
Drabo, Issa;
Ehlers, Jeffrey D.;
Roberts, Philip A.;
Close, Timothy J.

Publication type:

Article

Validation of rice blast resistance genes in barley using a QTL mapping population and near-isolines.

Published in:

Breeding Science, 2009, v. 59, n. 4, p. 341, doi. 10.1270/jsbbs.59.341

By:

Kongprakhon, Phinyarat;
Cuesta-Marcos, Alfonso;
Hayes, Patrick M.;
Richardson, Kelley L.;
Sirithunya, Pattama;
Sato, Kazuhiro;
Steffenson, Brian;
Toojinda, Theerayuth

Publication type:

Article

Genetic origin and composition of a natural hybrid poplar Populus × jrtyschensis from two distantly related species.

Published in:

BMC Plant Biology, 2016, v. 16, p. 1, doi. 10.1186/s12870-016-0776-6

By:

Dechun Jiang;
Jianju Feng;
Miao Dong;
Guili Wu;
Kangshan Mao;
Jianquan Liu

Publication type:

Article

Nitrogen-metabolism related genes in barley - haplotype diversity, linkage mapping and associations with malting and kernel quality parameters.

Published in:

BMC Genetics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2156-14-77

By:

Matthies, Inge E.;
Weise, Stephan;
Förster, Jutta;
Korzun, Viktor;
Stein, Nils;
Röder, Marion S.

Publication type:

Article

DIVERSIDAD GENÉTICA DE LA REGIÓN INTERGÉNICA (TrnL-F) DE CLOROPLASTO EN POBLACIONES DE Pholisma culiacanum Y.

Published in:

Agrociencia, 2016, v. 50, n. 7, p. 799

By:

Linares-Holguín, O. Omer;
Sánchez-Peña, Pedro;
Molina-Freaner, Francisco

Publication type:

Article

In-Silico Identification of EST Based Microsatellite Markers and SNPs, and Comparative Genomic Analysis of ESTs in Barnyard Millet for Their Omics Applications.

Published in:

Current Agriculture Research Journal, 2017, v. 5, n. 3, p. 279, doi. 10.12944/CARJ.5.3.03

By:

KALYANA BABU, B.;
CHAUHAN, RASHMI

Publication type:

Article

Genetic diversity of wild and cultivated grapevine accessions from southeast Turkey.

Published in:

Hereditas, 2014, v. 151, n. 4/5, p. 73, doi. 10.1111/hrd2.00039

By:

Karataş, Dilek Deǧirmenci;
Karataş, Hüseyin;
Laucou, Valérie;
Sarikamiş, Gölge;
Riahi, Leila;
Bacilieri, Roberto;
This, Patrice

Publication type:

Article

The unusual S locus of Leavenworthia is composed of two sets of paralogous loci.

Published in:

New Phytologist, 2017, v. 216, n. 4, p. 1247, doi. 10.1111/nph.14764

By:

Chantha, Sier‐Ching;
Herman, Adam C.;
Castric, Vincent;
Vekemans, Xavier;
Marande, William;
Schoen, Daniel J.

Publication type:

Article

Progress on deciphering the molecular aspects of cell-to-cell communication in Brassica self-incompatibility response.

Published in:

3 Biotech, 2018, v. 8, n. 8, p. 1, doi. 10.1007/s13205-018-1372-2

By:

Sehgal, Nidhi;
Singh, Saurabh

Publication type:

Article

Carrier screening of RTEL1 mutations in the Ashkenazi Jewish population.

Published in:

Clinical Genetics, 2015, v. 88, n. 2, p. 177, doi. 10.1111/cge.12459

By:

Fedick, A.M.;
Shi, L.;
Jalas, C.;
Treff, N.R.;
Ekstein, J.;
Kornreich, R.;
Edelmann, L.;
Mehta, L.;
Savage, S.A.

Publication type:

Article

Diversity of a cytokinin dehydrogenase gene in wild and cultivated barley.

Published in:

PLoS ONE, 2019, v. 14, n. 12, p. 1, doi. 10.1371/journal.pone.0225899

By:

Czajkowska, Beata I.;
Finlay, Conor M.;
Jones, Glynis;
Brown, Terence A.

Publication type:

Article

Variations in DENSE AND ERECT PANICLE 1 (DEP1) contribute to the diversity of the panicle trait in high-yielding japonica rice varieties in northern China.

Published in:

Breeding Science, 2016, v. 66, n. 4, p. 599, doi. 10.1270/jsbbs.16058

By:

Mingzhu Zhao;
Jian Sun;
Zhiqiu Xiao;
Fei Cheng;
Hai Xu;
Liang Tang;
Wenfu Chen;
Zhengjin Xu;
Quan Xu

Publication type:

Article

Development and molecular characterization of a doubled haploid population derived from a hybrid between japonica rice and wide compatible indica rice.

Published in:

Breeding Science, 2016, v. 66, n. 4, p. 552, doi. 10.1270/jsbbs.15141

By:

Hung Nguyen;
Xiao-Yang Chen;
Meng Jiang;
Qing Wang;
Li Deng;
Wei-Zhang Zhang;
Qing-Yao Shu

Publication type:

Article

Re-evaluation of the role of Indian germplasm as center of melon diversification based on genotyping-by-sequencing analysis.

Published in:

BMC Genomics, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12864-019-5784-0

By:

Gonzalo, Maria José;
Díaz, Aurora;
Dhillon, Narinder P. S.;
Reddy, Umesh K.;
Picó, Belén;
Monforte, Antonio J.

Publication type:

Article

A General Approach for Haplotype Phasing across the Full Spectrum of Relatedness.

Published in:

PLoS Genetics, 2014, v. 10, n. 4, p. 1, doi. 10.1371/journal.pgen.1004234

By:

O'Connell, Jared;
Gurdasani, Deepti;
Delaneau, Olivier;
Pirastu, Nicola;
Ulivi, Sheila;
Cocca, Massimiliano;
Traglia, Michela;
Huang, Jie;
Huffman, Jennifer E.;
Rudan, Igor;
McQuillan, Ruth;
Fraser, Ross M.;
Campbell, Harry;
Polasek, Ozren;
Asiki, Gershim;
Ekoru, Kenneth;
Hayward, Caroline;
Wright, Alan F.;
Vitart, Veronique;
Navarro, Pau

Publication type:

Article

The origin of wild populations of <italic>Toxicodendron succedaneum</italic> on mainland Japan revealed by genetic variation in chloroplast and nuclear DNA.

Published in:

Journal of Plant Research, 2018, v. 131, n. 2, p. 225, doi. 10.1007/s10265-017-0992-7

By:

Hiraoka, Yuichiro;
Tamaki, Ichiro;
Watanabe, Atsushi

Publication type:

Article

Maternal inheritance of chloroplast DNA in Pinus mugo Turra: a case study of Pinus mugo × Pinus sylvestris crossing.

Published in:

Plant Systematics & Evolution, 2018, v. 304, n. 1, p. 71, doi. 10.1007/s00606-017-1449-0

By:

Kormutak, Andrej;
Galgoci, Martin;
Sukenikova, Denisa;
Bolecek, Peter;
Libantova, Jana;
Gőmőry, Dusan

Publication type:

Article

Phylogeography of the European rock rose Helianthemum nummularium s.l. (Cistaceae): western richness and eastern poverty.

Published in:

Plant Systematics & Evolution, 2016, v. 302, n. 7, p. 781, doi. 10.1007/s00606-016-1299-1

By:

Volkova, Polina;
Schanzer, Ivan;
Soubani, Eman;
Meschersky, Ilya;
Widén, Björn

Publication type:

Article

Association analysis, genetic diversity and haplotyping of rice plants under salt stress using SSR markers linked to SalTol and morpho-physiological characteristics.

Published in:

Plant Systematics & Evolution, 2016, v. 302, n. 7, p. 871, doi. 10.1007/s00606-016-1304-8

By:

Kordrostami, Mojtaba;
Rabiei, Babak;
Hassani Kumleh, Hassan

Publication type:

Article

Coconut diversity based on chloroplast Single Nucleotide Amplified Polymorphism (SNAP) and Insertion-Deletion (InDel) markers.

Published in:

Biodiversitas: Journal of Biological Diversity, 2022, v. 23, n. 8, p. 4073, doi. 10.13057/biodiv/d230827

By:

RAHMAWATI, ANNISAA;
DINARTI, DINY;
MASKROMO, ISMAIL;
VOLKAERT, HUGO ALFRIED;
SUDARSONO

Publication type:

Article

The Rpv3-3 Haplotype and Stilbenoid Induction Mediate Downy Mildew Resistance in a Grapevine Interspecific Population.

Published in:

Frontiers in Plant Science, 2019, p. N.PAG, doi. 10.3389/fpls.2019.00234

By:

Vezzulli, Silvia;
Malacarne, Giulia;
Masuero, Domenico;
Vecchione, Antonella;
Dolzani, Chiara;
Goremykin, Vadim;
Mehari, Zeraye Haile;
Banchi, Elisa;
Velasco, Riccardo;
Stefanini, Marco;
Vrhovsek, Urska;
Zulini, Luca;
Franceschi, Pietro;
Moser, Claudio

Publication type:

Article

Phased Genotyping-by-Sequencing Enhances Analysis of Genetic Diversity and Reveals Divergent Copy Number Variants in Maize.

Published in:

G3: Genes | Genomes | Genetics, 2017, v. 7, n. 7, p. 2161, doi. 10.1534/g3.117.042036

By:

Manching, Heather;
Sengupta, Subhajit;
Hopper, Keith R.;
Polson, Shawn W.;
Yuan Ji;
Wisser, Randaii J.

Publication type:

Article

Assessing the Likelihood of Transmission of Candidatus Liberibacter solanacearum to Carrot by Potato Psyllid, Bactericera cockerelli (Hemiptera: Triozidae).

Published in:

PLoS ONE, 2016, v. 11, n. 8, p. 1, doi. 10.1371/journal.pone.0161016

By:

Munyaneza, Joseph E.;
Mustafa, Tariq;
Fisher, Tonja W.;
Sengoda, Venkatesan G.;
Horton, David R.

Publication type:

Article

Intraspecific diversity matters in bryophyte conservation – internal transcribed spacer and rpl 16 G2 intron variation in some European mosses.

Published in:

Journal of Bryology, 2016, v. 38, n. 3, p. 173, doi. 10.1080/03736687.2016.1145522

By:

Hedenäs, Lars

Publication type:

Article

Genetic structure of Florida green turtle rookeries as indicated by mitochondrial DNA control region sequences.

Published in:

Conservation Genetics, 2015, v. 16, n. 3, p. 673, doi. 10.1007/s10592-014-0692-y

By:

Shamblin, Brian;
Bagley, Dean;
Ehrhart, Llewellyn;
Desjardin, Nicole;
Martin, R.;
Hart, Kristen;
Naro-Maciel, Eugenia;
Rusenko, Kirt;
Stiner, John;
Sobel, Debra;
Johnson, Chris;
Wilmers, Thomas;
Wright, Laura;
Nairn, Campbell

Publication type:

Article

Population genetic structure in a threatened tree, Pyrus calleryana var. dimorphophylla revealed by chloroplast DNA and nuclear SSR locus polymorphisms.

Published in:

Conservation Genetics, 2013, v. 14, n. 5, p. 983, doi. 10.1007/s10592-013-0489-4

By:

Kato, Shuri;
Imai, Atsushi;
Rie, Nishioka;
Mukai, Yuzuru

Publication type:

Article

Proposal for a new nomenclature for CYP51 haplotypes in Zymoseptoria tritici and analysis of their distribution in Europe.

Published in:

Plant Pathology, 2018, v. 67, n. 8, p. 1706, doi. 10.1111/ppa.12891

By:

Huf, A.;
Rehfus, A.;
Lorenz, K. H.;
Bryson, R.;
Voegele, R. T.;
Stammler, G.

Publication type:

Article

Molecular, morphological and pathogenic diversity of Sclerotinia sclerotiorum isolates from common bean (Phaseolus vulgaris) fields in Argentina.

Published in:

Plant Pathology, 2018, v. 67, n. 8, p. 1740, doi. 10.1111/ppa.12880

By:

Abán, C. L.;
Taboada, G.;
Spedaletti, Y.;
Aparicio, M.;
Curti, R. N.;
Casalderrey, N. B.;
Maggio, M. E.;
Chocobar, M. O.;
Salgado, M.;
Galván, M. Z.

Publication type:

Article

Population genetic analysis of Phytophthora infestans in northwestern China.

Published in:

Plant Pathology, 2016, v. 65, n. 1, p. 17, doi. 10.1111/ppa.12392

By:

Tian, Y. E.;
Yin, J. L.;
Sun, J. P.;
Ma, Y. F.;
Wang, Q. H.;
Quan, J. L.;
Shan, W. X.

Publication type:

Article

Population structure of Phytophthora infestans in China - geographic clusters and presence of the EU genotype Blue_13.

Published in:

Plant Pathology, 2013, v. 62, n. 4, p. 932, doi. 10.1111/j.1365-3059.2012.02687.x

By:

Li, Y.;
Lee, T.;
Zhu, J. H.;
Jin, G. H.;
Lan, C. Z.;
Zhu, S. X.;
Zhang, R. F.;
Liu, B. W.;
Zhao, Z. J.;
Kessel, G.;
Huang, S. W.;
Jacobsen, E.

Publication type:

Article

Evidence for presence of the founder Ia mtDNA haplotype of Phytophthora infestans in 19th century potato tubers from the Rothamsted archives.

Published in:

Plant Pathology, 2013, v. 62, n. 3, p. 492, doi. 10.1111/j.1365-3059.2012.02680.x

By:

Ristaino, J. B.;
Hu, C. H.;
Fitt, B. D. L.

Publication type:

Article

Molecular phylogeography and conservation genetics of Sladenia celastrifolia inferred from chloroplast DNA sequence variation.

Published in:

Journal of Systematics & Evolution, 2014, v. 52, n. 4, p. 458, doi. 10.1111/jse.12057

By:

LU, Xi;
CHEN, Li;
CHEN, Ya‐Ping;
PENG, Hua

Publication type:

Article

Grass plastomes reveal unexpected paraphyly with endemic species of Micrairoideae from India and new haplotype markers in Arundinoideae.

Published in:

American Journal of Botany, 2017, v. 104, n. 2, p. 286, doi. 10.3732/ajb.1600285

By:

Duvall, Melvin R.;
Yadav, Shrirang R.;
Burke, Sean V.;
Wysocki, William P.

Publication type:

Article

Multi-gene phylogeny of the genus Lobaria: Evidence of species-pair and allopatric cryptic speciation in East Asia.

Published in:

American Journal of Botany, 2015, v. 102, n. 12, p. 2058, doi. 10.3732/ajb.1500207

By:

Cornejo, Carolina;
Scheidegger, Christoph

Publication type:

Article

Chloroplast heterogeneity and historical admixture within the genus Malus.

Published in:

American Journal of Botany, 2015, v. 102, n. 7, p. 1198, doi. 10.3732/ajb.1500095

By:

Volk, Gayle M.;
Henk, Adam D.;
Baldo, Angela;
Fazio, Gennaro;
Chao, C. Thomas;
Richards, Christopher M.

Publication type:

Article

Phylogeography and conservation genetics of the rare and relict Bretschneidera sinensis (Akaniaceae).

Published in:

PLoS ONE, 2018, v. 13, n. 1, p. 1, doi. 10.1371/journal.pone.0189034

By:

Wang, Mei-Na;
Duan, Lei;
Qiao, Qi;
Wang, Zheng-Feng;
Zimmer, Elizabeth A.;
Li, Zhong-Chao;
Chen, Hong-Feng

Publication type:

Article

First record of the deep-water shark Etmopterus spinax (Chondrichthyes: Etmopteridae) from the southern Baltic Sea (Pomeranian Bay).

Published in:

Oceanologia, 2018, v. 60, n. 3, p. 426, doi. 10.1016/j.oceano.2018.02.001

By:

Więcaszek, Beata;
Sobecka, Ewa;
Panicz, Remigiusz;
Keszka, Sławomir;
Górecka, Klaudia;
Linowska, Angelika

Publication type:

Article

Genotypic variability and aggressiveness of Bipolaris oryzae in the Philippines.

Published in:

European Journal of Plant Pathology, 2013, v. 137, n. 2, p. 415, doi. 10.1007/s10658-013-0256-x

By:

Burgos, M.;
Katimbang, M.;
Dela Paz, M.;
Beligan, G.;
Goodwin, P.;
Ona, I.;
Mauleon, R.;
Ardales, E.;
Vera Cruz, C.

Publication type:

Article

HAPRAP: a haplotype-based iterative method for statistical fine mapping using GWAS summary statistics.

Published in:

Bioinformatics, 2017, v. 33, n. 1, p. 79, doi. 10.1093/bioinformatics/btw565

By:

Jie Zheng;
Rodriguez, Santiago;
Laurin, Charles;
Baird, Denis;
Trela-Larsen, Lea;
Erzurumluoglu, Mesut A.;
Yi Zheng;
White, Jon;
Giambartolomei, Claudia;
Zabaneh, Delilah;
Morris, Richard;
Kumari, Meena;
Casas, Juan P.;
Hingorani, Aroon D.

Publication type:

Article

Molecular sequence data from populations of Bryoria fuscescens s. lat. in the mountains of central Spain indicates a mismatch between haplotypes and chemotypes.

Published in:

Lichenologist, 2015, v. 47, n. 5, p. 279, doi. 10.1017/S0024282915000274

By:

Boluda, Carlos G.;
Rico, Víctor J.;
Crespo, Ana;
Divakar, Pradeep K.;
Hawksworth, David L.

Publication type:

Article

Dispersal analysis of three Peltigera species based on landscape genetics data.

Published in:

Mycology: An International Journal on Fungal Biology, 2013, v. 4, n. 4, p. 187, doi. 10.1080/21501203.2013.875955

By:

Anstett, Daniel N.;
O'Brien, Heath;
Larsen, Ellen W.;
Troy McMullin, R.;
Fortin, Marie-Josée

Publication type:

Article

LIPG SNPs, their haplotypes and gene-environment interactions on serum lipid levels.

Published in:

Lipids in Health & Disease, 2019, v. 18, n. 1, p. N.PAG, doi. 10.1186/s12944-018-0942-y

By:

Yang, Shuo;
Yin, Rui-Xing;
Miao, Liu;
Zhou, Yong-Gang;
Wu, Jie;
Zhang, Qing-Hui

Publication type:

Article

Genetic evidence for paternal inheritance of the chloroplast in four Australian Callitris species (Cupressaceae).

Published in:

Journal of Forest Research, 2014, v. 19, n. 1, p. 244, doi. 10.1007/s10310-012-0384-8

By:

Sakaguchi, Shota;
Tsumura, Yoshihiko;
Crisp, Michael D.;
Bowman, David M. J. S.;
Isagi, Yuji

Publication type:

Article

Indigenous genetic lineages of Fagus crenata found in the Izu Peninsula suggest that there was one of refugia for the species during the last glacial maximum.

Published in:

Journal of Forest Research, 2013, v. 18, n. 5, p. 418, doi. 10.1007/s10310-012-0368-8

By:

Katai, Hideyuki;
Takahashi, Makoto;
Hiraoka, Koichi;
Yamada, Shinya;
Tomaru, Nobuhiro

Publication type:

Article