Works about PLANT genomes

Results: 5000

Molecular Mimicry of Transposable Elements in Plants Open Access.

Published in:

Plant & Cell Physiology, 2025, v. 66, n. 4, p. 490, doi. 10.1093/pcp/pcae058

By:

Chu, Jie;
Newman, Josephine;
Cho, Jungnam

Publication type:

Article

Mutagenic impact of picric acid on chloroplast genome and a selection of biological attributes of Brassica napus L. (Brassicaceae).

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11565-2

By:

Ahmad, Ishtiaq;
Ullah, Barkat;
Muhammad, Zahir;
Alshehri, Dikhnah;
Khan, Muhammad Nauman;
Kaplan, Alevcan;
Iqbal, Majid;
Al-Shuraym, Laila A.;
Algopishi, Uthman Balgith;
Alhag, Sadeq K.;
Alsuwat, Meshari A.;
Olana, Diriba Dereje;
Javed, Muhammad Ammar;
Razak, Sarah Abdul

Publication type:

Article

A Systematic Review of the Advances and New Insights into Copy Number Variations in Plant Genomes.

Published in:

Plants (2223-7747), 2025, v. 14, n. 9, p. 1399, doi. 10.3390/plants14091399

By:

Silaiyiman, Saimire;
Liu, Jiaxuan;
Wu, Jiaxin;
Ouyang, Lejun;
Cao, Zheng;
Shen, Chao

Publication type:

Article

Complete mitochondrial genome of Ficus hirta and its comparative analysis.

Published in:

Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1530105

By:

Deng, Wangdong;
Cai, Xinyi

Publication type:

Article

Genome assembly of the plant pathogen Plasmodiophora brassicae reveals novel secreted proteins contributing to the infection of Brassica rapa.

Published in:

Horticulture Plant Journal, 2025, v. 11, n. 3, p. 1125, doi. 10.1016/j.hpj.2023.09.001

By:

Peirong Li;
Lv, Sirui;
Zhijun Zhang;
Tongbing Su;
Weihong Wang;
Xiaoyun Xin;
Xiuyun Zhao;
Xiaoman Li;
Deshuang Zhang;
Yangjun Yu;
Tao Ma;
Guodong Liu;
Fenglan Zhang;
Shuancang Yu

Publication type:

Article

Genome mining to elucidate antimicrobial and plant growth promoting potentials in Lactic acid bacteria.

Published in:

European Journal of Plant Pathology, 2025, v. 172, n. 1, p. 7, doi. 10.1007/s10658-024-02984-0

By:

Vargas, Christian;
Botero, Lina;
Rodriguez, Edwin;
Dávila, Lorena;
Racedo, Camilo;
Barrera, Claudia;
Bernal, Adriana J.;
Jiménez, Hugo;
Zuluaga, Paola;
González, Carolina

Publication type:

Article

Speciation and Reticulation in the Polystichum Allotetraploids of the Costa Rican Cordillera Talamanca.

Published in:

American Fern Journal, 2020, v. 110, n. 4, p. 151, doi. 10.1640/0002-8444-110.4.151

By:

Jorgensen, Stacy A.;
Barrington, David S.

Publication type:

Article

Phylogenomics Reveals Three Sources of Adaptive Variation during a Rapid Radiation.

Published in:

PLoS Biology, 2016, v. 14, n. 2, p. 1, doi. 10.1371/journal.pbio.1002379

By:

Pease, James B.;
Haak, David C.;
Hahn, Matthew W.;
Moyle, Leonie C.

Publication type:

Article

Precision Genome Engineering and Agriculture: Opportunities and Regulatory Challenges.

Published in:

PLoS Biology, 2014, v. 12, n. 6, p. 1, doi. 10.1371/journal.pbio.1001877

By:

Voytas, Daniel F.;
Gao, Caixia

Publication type:

Article

Autoimmunity: A Barrier to Gene Flow in Plants?

Published in:

PLoS Biology, 2007, v. 5, n. 9, p. e262, doi. 10.1371/journal.pbio.0050262

By:

Gross, Liza

Publication type:

Article

Horizontal Transfer of a Plant Transposon.

Published in:

PLoS Biology, 2006, v. 4, n. 1, p. e5, doi. 10.1371/journal.pbio.0040005

By:

Xianmin Diao;
Freeling, Michael;
Lisch, Damon

Publication type:

Article

Horizontal Transfer of a Plant Transposon.

Published in:

PLoS Biology, 2005, v. 3, n. 12, p. 1, doi. 10.1371/journal.pbio.0040005

By:

Diao, Xianmin;
Freeling, Michael;
Lisch, Damon

Publication type:

Article

iDNA6mA-Rice-DL: A local web server for identifying DNA N6-methyladenine sites in rice genome by deep learning method.

Published in:

Journal of Bioinformatics & Computational Biology, 2021, v. 19, n. 5, p. 1, doi. 10.1142/S0219720021500190

By:

He, Shiqian;
Kong, Liang;
Chen, Jing

Publication type:

Article

An enrichment method for mapping ambiguous reads to the reference genome for NGS analysis.

Published in:

Journal of Bioinformatics & Computational Biology, 2019, v. 17, n. 6, p. N.PAG, doi. 10.1142/S0219720019400122

By:

Liu, Yuan;
Ma, Yongchao;
Salsman, Evan;
Manthey, Frank A.;
Elias, Elias M.;
Li, Xuehui;
Yan, Changhui

Publication type:

Article

Photosynthetic characteristics in Oryza species.

Published in:

Photosynthetica, 2010, v. 48, n. 2, p. 234, doi. 10.1007/s11099-010-0029-0

By:

Zhao, M.;
Ding, Z.;
Lafitte, R.;
Sacks, E.;
Dimayuga, G.;
Holt, D.

Publication type:

Article

Comparative assessment of chloroplast transcriptional responses highlights conserved and unique patterns across Triticeae members under salt stress.

Published in:

Photosynthesis Research, 2018, v. 136, n. 3, p. 357, doi. 10.1007/s11120-017-0469-5

By:

Mirzaei, Saeid;
Mansouri, Mehdi;
Mohammadi-Nejad, Ghasem;
Sablok, Gaurav

Publication type:

Article

Phylogenomic analysis of the Chlamydomonas genome unmasks proteins potentially involved in photosynthetic function and regulation.

Published in:

Photosynthesis Research, 2010, v. 106, n. 1/2, p. 3, doi. 10.1007/s11120-010-9555-7

By:

Grossman, Arthur;
Karpowicz, Steven;
Heinnickel, Mark;
Dewez, David;
Hamel, Blaise;
Dent, Rachel;
Niyogi, Krishna;
Johnson, Xenie;
Alric, Jean;
Wollman, Francis-André;
Huiying Li;
Merchant, Sabeeha

Publication type:

Article

Identification of quantitative trait loci controlling sucrose content based on an enriched genetic linkage map of sugarcane ( Saccharum spp. hybrids) cultivar 'LCP 85-384'.

Published in:

Euphytica, 2016, v. 207, n. 3, p. 527, doi. 10.1007/s10681-015-1538-5

By:

Liu, Pingwu;
Chandra, Amaresh;
Que, Youxiong;
Chen, Ping-Hua;
Grisham, Michael;
White, William;
Dalley, Caleb;
Tew, Thomas;
Pan, Yong-Bao

Publication type:

Article

The effect of different genome and cytoplasm on meiotic pairing in maize newly synthetic polyploids.

Published in:

Euphytica, 2016, v. 207, n. 3, p. 593, doi. 10.1007/s10681-015-1552-7

By:

Cheng, Mingjun;
Zheng, Mingmin;
Yang, Shipeng;
Li, Yang;
Dong, Xingchun;
Li, Jing;
Sun, Rulong;
Li, Huaxiong;
Zhou, Shufeng;
Wu, Yuanqi;
Rong, Tingzhao;
Tang, Qilin

Publication type:

Article

Recurrent parent genome recovery in different populations with the introgression of Sub1 gene from a cross between MR219 and Swarna- Sub1.

Published in:

Euphytica, 2016, v. 207, n. 3, p. 605, doi. 10.1007/s10681-015-1554-5

By:

Ahmed, Fahim;
Rafii, Mohd;
Ismail, Mohd;
Juraimi, Abdul;
Rahim, Harun;
Tanweer, Fatah;
Latif, Mohammad

Publication type:

Article

Cytogenetic and cytometric analyses in artificial intercytotypic hybrids of the emergent orchid model species Erycina pusilla.

Published in:

Euphytica, 2015, v. 206, n. 2, p. 533, doi. 10.1007/s10681-015-1534-9

By:

Yeh, Hsuan-Yu;
Lin, Choun-Sea;
Chang, Song-Bin

Publication type:

Article

Identification of a non-redundant set of 202 in silico SSR markers and applicability of a select set in chickpea ( Cicer arietinum L.).

Published in:

Euphytica, 2015, v. 205, n. 2, p. 381, doi. 10.1007/s10681-015-1394-3

By:

Agarwal, Gaurav;
Sabbavarapu, Murali;
Singh, Vikas;
Thudi, Mahendar;
Sheelamary, S.;
Gaur, Pooran;
Varshney, Rajeev

Publication type:

Article

Level and pattern of DNA methylation changes in rice cold tolerance introgression lines derived from Oryza rufipogon Griff.

Published in:

Euphytica, 2015, v. 205, n. 1, p. 73, doi. 10.1007/s10681-015-1389-0

By:

Dai, Liang-Fang;
Chen, Ya-Ling;
Luo, Xiang-Dong;
Wen, Xiu-Fang;
Cui, Feng-Lei;
Zhang, Fan-Tao;
Zhou, Yi;
Xie, Jian-Kun

Publication type:

Article

Production of Brassica tri-genomic vegetable germplasm by hybridisation between tuber mustard ( Brassica juncea) and red cabbage ( B. oleracea).

Published in:

Euphytica, 2015, v. 204, n. 2, p. 323, doi. 10.1007/s10681-014-1336-5

By:

Li, Junxing;
Rao, Linli;
Meng, Qiufeng;
Ghani, Muhammad;
Chen, Liping

Publication type:

Article

Effect of cytoplasmic diversity on post anthesis heat tolerance in wheat.

Published in:

Euphytica, 2015, v. 204, n. 2, p. 383, doi. 10.1007/s10681-014-1350-7

By:

Talukder, Shyamal;
Vara Prasad, P.;
Todd, Tim;
Babar, Md;
Poland, Jesse;
Bowden, Robert;
Fritz, Allan

Publication type:

Article

Parental genome contribution in maize DH lines derived from six backcross populations using genotyping by sequencing.

Published in:

Euphytica, 2015, v. 202, n. 1, p. 129, doi. 10.1007/s10681-014-1238-6

By:

Ogugo, Veronica;
Semagn, Kassa;
Beyene, Yoseph;
Runo, Steven;
Olsen, Michael;
Warburton, Marilyn

Publication type:

Article

Molecular mapping of QTLs for domestication-related traits in cowpea ( V. unguiculata (L.) Walp.).

Published in:

Euphytica, 2014, v. 200, n. 3, p. 401, doi. 10.1007/s10681-014-1170-9

By:

Andargie, Mebeaselassie;
Pasquet, Remy;
Gowda, Bhavani;
Muluvi, Geoffrey;
Timko, Michael

Publication type:

Article

Molecular tagging and marker-assisted selection of fiber quality traits using chromosome segment introgression lines (CSILs) in cotton.

Published in:

Euphytica, 2014, v. 200, n. 2, p. 239, doi. 10.1007/s10681-014-1150-0

By:

Guo, Yuping;
Guo, Xian;
Wang, Fang;
Wei, Ze;
zhang, Suqing;
Wang, Liyuan;
Yuan, Yanchao;
Zeng, Wenguan;
Zhang, Guihua;
Zhang, Tianzhen;
Song, Xianliang;
Sun, Xuezhen

Publication type:

Article

Meiotic chromosome pairing in intergeneric hybrids of colchicaceous ornamentals revealed by genomic in situ hybridization (GISH).

Published in:

Euphytica, 2014, v. 200, n. 2, p. 251, doi. 10.1007/s10681-014-1152-y

By:

Kishimoto, Tomonari;
Yamakawa, Miki;
Nakazawa, Daisuke;
Amano, Junji;
Kuwayama, Sachiko;
Nakano, Masaru

Publication type:

Article

Assessing the agronomic potential of linseed genotypes by multivariate analyses and association mapping of agronomic traits.

Published in:

Euphytica, 2014, v. 196, n. 1, p. 35, doi. 10.1007/s10681-013-1012-1

By:

Soto-Cerda, Braulio;
Westermeyer, Fernando;
Iñiguez-Luy, Federico;
Muñoz, Gastón;
Montenegro, Adolfo;
Cloutier, Sylvie

Publication type:

Article

Backcross introgression of plastomic factors controlling chilling tolerance into elite cucumber (<i>Cucumis sativus</i> L.) germplasm: early generation recovery of recurrent parent phenotype.

Published in:

Euphytica, 2014, v. 195, n. 2, p. 217, doi. 10.1007/s10681-013-0989-9

By:

Gordon, Vanessa S.;
Staub, Jack E.

Publication type:

Article

Number of involved genes and heritability of clover rot ( Sclerotinia trifoliorum) resistance in red clover ( Trifolium pratense).

Published in:

Euphytica, 2013, v. 194, n. 1, p. 137, doi. 10.1007/s10681-013-0982-3

By:

Vleugels, Tim;
Bockstaele, Erik

Publication type:

Article

Substitution of Hordeum marinum ssp. gussoneanum chromosome 7HL into wheat homoeologous group-7.

Published in:

Euphytica, 2013, v. 192, n. 2, p. 251, doi. 10.1007/s10681-012-0843-5

By:

Efremova, Tatyana;
Arbuzova, Valentina;
Trubacheeva, Nataliya;
Ocadchaya, Tatyana;
Chumanova, Evgenia;
Pershina, Lidiya

Publication type:

Article

Construction of high-resolution linkage map of the Ms locus, a restorer-of-fertility gene in onion ( Allium cepa L.).

Published in:

Euphytica, 2013, v. 192, n. 2, p. 267, doi. 10.1007/s10681-012-0851-5

By:

Park, Jaehyuk;
Bang, Haejeen;
Cho, Dong;
Yoon, Moo-Kyoung;
Patil, Bhimanagouda;
Kim, Sunggil

Publication type:

Article

Retrotransposon-related genetic distance and hybrid performance in sunflower ( Helianthus annuus L.).

Published in:

Euphytica, 2013, v. 192, n. 2, p. 289, doi. 10.1007/s10681-013-0883-5

By:

Buti, M.;
Giordani, T.;
Vukich, M.;
Pugliesi, C.;
Natali, L.;
Cavallini, A.

Publication type:

Article

Challenges and opportunities for developing maize cultivars in the public sector.

Published in:

Euphytica, 2013, v. 191, n. 2, p. 165, doi. 10.1007/s10681-013-0870-x

By:

Carena, M.

Publication type:

Article

Developing new markers and QTL mapping for greenbug resistance in sorghum [ Sorghum bicolor (L.) Moench].

Published in:

Euphytica, 2013, v. 191, n. 2, p. 191, doi. 10.1007/s10681-012-0755-4

By:

Punnuri, Somashekhar;
Huang, Yinghua;
Steets, Janette;
Wu, Yanqi

Publication type:

Article

SSR analysis of introgression of drought tolerance from the genome of Hordeum spontaneum into cultivated barley ( Hordeum vulgare ssp vulgare).

Published in:

Euphytica, 2013, v. 191, n. 2, p. 231, doi. 10.1007/s10681-012-0795-9

By:

Lakew, B.;
Henry, R.;
Eglinton, J.;
Baum, M.;
Ceccarelli, S.;
Grando, S.

Publication type:

Article

Development and identification of a wheat- Leymus mollis multiple alien substitution line.

Published in:

Euphytica, 2013, v. 190, n. 1, p. 45, doi. 10.1007/s10681-012-0772-3

By:

Zhao, Ji-Xin;
Du, Wan-Li;
Wu, Jun;
Cheng, Xue-Ni;
Gao, Yang;
Pang, Yu-Hui;
Chen, Xin-Hong;
Liu, Shu-Hui;
Yang, Qun-Hui;
Fu, Jie

Publication type:

Article

Development of a chromosome segment substitution line population with wild soybean ( Glycine soja Sieb. et Zucc.) as donor parent.

Published in:

Euphytica, 2013, v. 189, n. 2, p. 293, doi. 10.1007/s10681-012-0817-7

By:

Wang, Wubin;
He, Qingyuan;
Yang, Hongyan;
Xiang, Shihua;
Zhao, Tuanjie;
Gai, Junyi

Publication type:

Article

Genome-wide selection in cassava.

Published in:

Euphytica, 2012, v. 187, n. 2, p. 263, doi. 10.1007/s10681-012-0722-0

By:

Oliveira, Eder;
Resende, Marcos;
Silva Santos, Vanderlei;
Ferreira, Cláudia;
Oliveira, Gilmara;
Silva, Maiane;
Oliveira, Luciana;
Aguilar-Vildoso, Carlos

Publication type:

Article

Faba bean genomics: current status and future prospects.

Published in:

Euphytica, 2012, v. 186, n. 3, p. 609, doi. 10.1007/s10681-012-0658-4

By:

Alghamdi, Salem;
Migdadi, Hussein;
Ammar, Megahed;
Paull, Jeffrey;
Siddique, K.

Publication type:

Article

Genetic characterization and gene flow in different geographical-distance neighbouring natural populations of wild soybean ( Glycine soja Sieb. & Zucc.) and implications for protection from GM soybeans.

Published in:

Euphytica, 2012, v. 186, n. 3, p. 817, doi. 10.1007/s10681-012-0621-4

By:

Wang, Ke-Jing;
Li, Xiang-Hua

Publication type:

Article

A new method for producing allohexaploid Brassica through unreduced gametes.

Published in:

Euphytica, 2012, v. 186, n. 2, p. 277, doi. 10.1007/s10681-011-0537-4

By:

Mason, Annaliese;
Yan, Guijun;
Cowling, Wallace;
Nelson, Matthew

Publication type:

Article

Diploid and tetraploid progenitors of wheat are valuable sources of resistance to the root lesion nematode Pratylenchus thornei.

Published in:

Euphytica, 2012, v. 186, n. 2, p. 377, doi. 10.1007/s10681-011-0617-5

By:

Sheedy, J.;
Thompson, J.;
Kelly, A.

Publication type:

Article

Genome size variation in three Saccharum species.

Published in:

Euphytica, 2012, v. 185, n. 3, p. 511, doi. 10.1007/s10681-012-0664-6

By:

Zhang, Jisen;
Nagai, Chifumi;
Yu, Qingyi;
Pan, Yong-Bao;
Ayala-Silva, Tomas;
Schnell, Raymond;
Comstock, Jack;
Arumuganathan, Aru;
Ming, Ray

Publication type:

Article

Elite durum wheat genetic map and recombination rate variation in a multiparental connected design.

Published in:

Euphytica, 2012, v. 185, n. 1, p. 61, doi. 10.1007/s10681-012-0627-y

By:

Vaissayre, Laurence;
Ardisson, Morgane;
Borries, Christiane;
Santoni, Sylvain;
David, Jacques;
Roumet, Pierre

Publication type:

Article

Quantitative genetic analysis of condensed tannins in oilseed rape meal.

Published in:

Euphytica, 2012, v. 184, n. 2, p. 195, doi. 10.1007/s10681-011-0546-3

By:

Lipsa, Florin;
Snowdon, Rod;
Friedt, Wolfgang

Publication type:

Article

In vitro induction of tetraploid plants from callus cultures of diploid bananas ( Musa acuminata, AA group) 'Kluai Leb Mu Nang' and 'Kluai Sa'.

Published in:

Euphytica, 2012, v. 183, n. 1, p. 111, doi. 10.1007/s10681-011-0516-9

By:

Kanchanapoom, Kamnoon;
Koarapatchaikul, Korn

Publication type:

Article

Phenotypic diversity and identification of wild Arachis accessions with useful agronomic and nutritional traits.

Published in:

Euphytica, 2011, v. 182, n. 1, p. 103, doi. 10.1007/s10681-011-0518-7

By:

Upadhyaya, Hari;
Dwivedi, Sangam;
Nadaf, Hajisaheb;
Singh, Sube

Publication type:

Article