Works matching DE "PERL (Computer program language)"

Results: 251

Compiling a Collective, Searchable List of Full Text Titles for Multiple Databases.

Published in:

Internet Reference Services Quarterly, 2000, v. 5, n. 3, p. 73, doi. 10.1300/J136v05n03_10

By:

Suhr, Karl

Publication type:

Article

How to become a programming tadpole.

Published in:

Nature Biotechnology, 2002, v. 20, n. 3, p. 221, doi. 10.1038/nbt0302-221

By:

Gilbert, James G.R.

Publication type:

Article

Plat_Forms: A Web Development Platform Comparison by an Exploratory Experiment Searching for Emergent Platform Properties.

Published in:

IEEE Transactions on Software Engineering, 2011, v. 37, n. 1, p. 95, doi. 10.1109/TSE.2010.22

By:

Prechelt, Lutz

Publication type:

Article

DBGSA: a novel method of distance-based gene set analysis.

Published in:

Journal of Human Genetics, 2012, v. 57, n. 10, p. 642, doi. 10.1038/jhg.2012.86

By:

Li, Jin;
Wang, Limei;
Xu, Liangde;
Zhang, Ruijie;
Huang, Meilin;
Wang, Ke;
Xu, Jiankai;
Lv, Hongchao;
Shang, Zhenwei;
Zhang, Mingming;
Jiang, Yongshuai;
Guo, Maozu;
Li, Xia

Publication type:

Article

GFF-Ex: a genome feature extraction package.

Published in:

BMC Research Notes, 2014, v. 7, n. 1, p. 1, doi. 10.1186/1756-0500-7-315

By:

Rastogi, Achal;
Gupta, Dinesh

Publication type:

Article

IMAD: flexible annotation of microarray sequences.

Published in:

BMC Proceedings, 2009, v. 3, p. 1, doi. 10.1186/1753-6561-3-S4-S2

By:

Prickett, Dennis;
Watson, Michael

Publication type:

Article

Quantitative Linguistic Computing with Perl.

Published in:

2015

By:

Feng, Haoda

Publication type:

Book Review

Dynamic online surveys and experiments with the free open-source software dynQuest.

Published in:

Behavior Research Methods, 2007, v. 39, n. 3, p. 415, doi. 10.3758/BF03193011

By:

Rademacher, Jens D. M.;
Lippke, Sonia

Publication type:

Article

CASVM: web server for SVM-based prediction of caspase substrates cleavage sites.

Published in:

Bioinformatics, 2007, v. 23, n. 23, p. 3241, doi. 10.1093/bioinformatics/btm334

By:

Lawrence J.K. Wee;
Tin Wee Tan;
Shoba Ranganathan

Publication type:

Article

ProServer: a simple, extensible Perl DAS server.

Published in:

Bioinformatics, 2007, v. 23, n. 12, p. 1568, doi. 10.1093/bioinformatics/btl650

By:

Robert D. Finn;
James W. Stalker;
David K. Jackson;
Eugene Kulesha;
Jody Clements;
Roger Pettett

Publication type:

Article

Design and Development of Prototype Astronomical Digital Image Library using Greenstone Digital Library Software.

Published in:

DESIDOC Journal of Library & Information Technology, 2010, v. 30, n. 6, p. 25, doi. 10.14429/djlit.30.673

By:

Alam, Md Nurul;
Pandey, Pragya

Publication type:

Article

Perl Programming for Biologists (Book).

Published in:

2004

By:

Laederach, Alain

Publication type:

Book Review

Biomashups: the new world of exploratory bioinformatics?

Published in:

Concurrency & Computation: Practice & Experience, 2011, v. 23, n. 11, p. 1169, doi. 10.1002/cpe.1598

By:

Hogan, James M.;
Sumitomo, Jiro;
Roe, Paul;
Newell, Felicity

Publication type:

Article

Current SUSE Pearl Undulator.

Published in:

Petroleum - Gas University of Ploiesti Bulletin, Mathematics - Informatics - Physics Series, 2008, v. 60, n. 2, p. 122

By:

Şandru, Liana;
Niculescu, V. I. R.;
Micloş, S.;
Leonovici, Minola R.

Publication type:

Article

Software for pre-processing Illumina nextgeneration sequencing short read sequences.

Published in:

Source Code for Biology & Medicine, 2014, v. 9, n. 1, p. 1, doi. 10.1186/1751-0473-9-8

By:

Chuming Chen;
Khaleel, Sari S.;
Hongzhan Huang;
Wu, Cathy H.

Publication type:

Article

A software pipeline for processing and identification of fungal ITS sequences.

Published in:

Source Code for Biology & Medicine, 2009, v. 4, p. 1, doi. 10.1186/1751-0473-4-1

By:

Nilsson, R. Henrik;
Bok, Gunilla;
Ryberg, Martin;
Kristiansson, Erik;
Hallenberg, Nils

Publication type:

Article

Retraction: Measures of Clade Confidence Do Not Correlate with Accuracy of Phylogenetic Trees.

Published in:

PLoS Computational Biology, 2007, v. 3, n. 7, p. e158, doi. 10.1371/journal.pcbi.0030158

By:

Hall, Barry G.;
Salipante, Stephen J.

Publication type:

Article

ICBdocker: a Docker image for proteome annotation and visualization.

Published in:

Bioinformatics, 2018, v. 34, n. 22, p. 3937, doi. 10.1093/bioinformatics/bty493

By:

Bordin, Nicola;
Devos, Damien P

Publication type:

Article

Fragment recruitment on metabolic pathways: comparative metabolic profiling of metagenomes and metatranscriptomes.

Published in:

Bioinformatics, 2013, v. 29, n. 6, p. 790, doi. 10.1093/bioinformatics/bts721

By:

Desai, Dhwani K.;
Schunck, Harald;
Löser, Johannes W.;
LaRoche, Julie

Publication type:

Article

JEnsembl: a version-aware Java API to Ensembl data systems.

Published in:

Bioinformatics, 2012, v. 28, n. 21, p. 2724, doi. 10.1093/bioinformatics/bts525

By:

Paterson, Trevor;
Law, Andy

Publication type:

Article

PHACTS, a computational approach to classifying the lifestyle of phages.

Published in:

Bioinformatics, 2012, v. 28, n. 5, p. 614, doi. 10.1093/bioinformatics/bts014

By:

McNair, Katelyn;
Bailey, Barbara A.;
Edwards, Robert A.

Publication type:

Article

NetSeed: a network-based reverse-ecology tool for calculating the metabolic interface of an organism with its environment.

Published in:

Bioinformatics, 2012, v. 28, n. 5, p. 734, doi. 10.1093/bioinformatics/btr721

By:

Carr, Rogan;
Borenstein, Elhanan

Publication type:

Article

A unified index of sequence quality and contig overlap for DNA barcoding.

Published in:

Bioinformatics, 2010, v. 26, n. 21, p. 2780, doi. 10.1093/bioinformatics/btq507

By:

Little, Damon P.

Publication type:

Article

DIYA: a bacterial annotation pipeline for any genomics lab.

Published in:

Bioinformatics, 2009, v. 25, n. 7, p. 962, doi. 10.1093/bioinformatics/btp097

By:

Stewart, Andrew C.;
Osborne, Brian;
Read, Timothy D.

Publication type:

Article

The MSM program: web-based statistics package for estimating usual dietary intake using the Multiple Source Method.

Published in:

European Journal of Clinical Nutrition, 2011, v. 65, n. 1, p. S87, doi. 10.1038/ejcn.2011.92

By:

Harttig, U;
Haubrock, J;
Knüppel, S;
Boeing, H

Publication type:

Article

Biological Data Analysis Program (BDAP): a multitasking biological sequence analysis program.

Published in:

Neural Computing & Applications, 2018, v. 30, n. 5, p. 1493, doi. 10.1007/s00521-016-2772-z

By:

Dwivedi, Vivek Dhar;
Tripathi, Indra Prasad;
Kaushik, Aman Chandra;
Bharadwaj, Shiv;
Mishra, Sarad Kumar

Publication type:

Article

SAAF: small-angle neutron scattering data analysis using analytical functions.

Published in:

Journal of Applied Crystallography, 2011, v. 44, n. 6, p. 1277, doi. 10.1107/S0021889811046188

By:

Zhao, Jinkui

Publication type:

Article

Rule based classifier for the analysis of gene-gene and gene-environment interactions in genetic association studies.

Published in:

BioData Mining, 2011, v. 4, n. 1, p. 4, doi. 10.1186/1756-0381-4-4

By:

Lehr, Thorsten;
Jing Yuan;
Zeumer, Dirk;
Jayadev, Supriya;
Ritchie, Marylyn D.

Publication type:

Article

How Are Architects Made?

Published in:

IEEE Software, 2013, v. 30, n. 5, p. 11, doi. 10.1109/MS.2013.105

By:

Correa, Bett

Publication type:

Article

Choosing a Programming Language.

Published in:

IEEE Software, 2006, v. 23, n. 4, p. 62, doi. 10.1109/MS.2006.97

By:

Spinellis, Diomidis

Publication type:

Article

Portable C/C++ Code for Portable XML Data.

Published in:

IEEE Software, 2006, v. 23, n. 1, p. 76, doi. 10.1109/MS.2006.27

By:

Wang, Zhaoqing;
Cheng, Harry H.

Publication type:

Article

Case Study: Using Perl and CGI Scripts to Automate a Quality Control Workflow for Scanned Congressional Documents.

Published in:

2012

By:

Belfiore, Doreva

Publication type:

Case Study

Using ImageMagick to Automatically Increase Legibility of Scanned Text Documents.

Published in:

Code4Lib Journal, 2011, n. 14, p. 1

By:

Belfiore, Doreva

Publication type:

Article

Modélisation automatique de connecteurs Iogiques par analyse statistique du contexte.

Published in:

Canadian Journal of Information & Library Sciences, 2011, v. 35, n. 3, p. 287, doi. 10.1353/ils.2011.0017

By:

Charton, Eric;
Torres-Moreno, Juan-Manuel

Publication type:

Article

Open Source Finance.

Published in:

Journal of Investing, 2009, v. 18, n. 1, p. 92, doi. 10.3905/JOI.2009.18.1.092

By:

Kane, David;
Masters, Joseph D.

Publication type:

Article

Automated de-identification of free-text medical records.

Published in:

2008

By:

Neamatullah, Ishna;
Douglass, Margaret M.;
Lehman, Li-wei H.;
Reisner, Andrew;
Villarroel, Mauricio;
Long, William J.;
Szolovits, Peter;
Moody, George B.;
Mark, Roger G.;
Clifford, Gari D.

Publication type:

journal article

Deafness mutation mining using regular expression based pattern matching.

Published in:

BMC Medical Informatics & Decision Making, 2007, v. 7, n. 1, p. 32, doi. 10.1186/1472-6947-7-32

By:

Frenz, Christopher M

Publication type:

Article

Locating previously unknown patterns in data-mining results: a dual data- and knowledge-mining method.

Published in:

BMC Medical Informatics & Decision Making, 2006, v. 6, n. 1, p. 13, doi. 10.1186/1472-6947-6-13

By:

Siadaty, Mir S.;
Knaus, William A.

Publication type:

Article

Doublet method for very fast autocoding.

Published in:

BMC Medical Informatics & Decision Making, 2004, v. 4, n. 1, p. 16, doi. 10.1186/1472-6947-4-16

By:

Berman, Jules J.

Publication type:

Article

The tissue microarray data exchange specification: A community-based, open source tool for sharing tissue microarray data.

Published in:

BMC Medical Informatics & Decision Making, 2003, v. 3, n. 1, p. 5, doi. 10.1186/1472-6947-3-5

By:

Berman, Jules J.;
Edgerton, Mary E.;
Friedman, Bruce A.

Publication type:

Article

GO2MSIG, an automated GO based multi-species gene set generator for gene set enrichment analysis.

Published in:

BMC Bioinformatics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2105-15-146

By:

Christiaan Powell, Justin Andrew

Publication type:

Article

RCircos: an R package for Circos 2D track plots.

Published in:

2013

By:

Hongen Zhang;
Meltzer, Paul;
Davis, Sean

Publication type:

Product Review

Bio::Homology::InterologWalk - A Perl module to build putative protein-protein interaction networks through interolog mapping.

Published in:: BMC Bioinformatics, 2011, v. 12, n. Suppl 6, p. 289, doi. 10.1186/1471-2105-12-289
Publication type:: Article

Extraction, integration and analysis of alternative splicing and protein structure distributed information.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S12-S15

By:

D'Antonio, Matteo;
Masseroli, Marco

Publication type:

Article

A Perl procedure for protein identification by Peptide Mass Fingerprinting.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S12-S11

By:

Tiengo, Alessandra;
Barbarini, Nicola;
Troiani, Sonia;
Rusconi, Luisa;
Magni, Paolo

Publication type:

Article

A comparison of common programming languages used in bioinformatics.

Published in:

BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-82

By:

Fourment, Mathieu;
Gillings, Michael R.

Publication type:

Article

A perl package and an alignment tool for phylogenetic networks.

Published in:

BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-175

By:

Cardona, Gabriel;
Rosselló, Francesc;
Valiente, Gabriel

Publication type:

Article

A general strategy to determine the congruence between a hierarchical and a non-hierarchical classification.

Published in:

BMC Bioinformatics, 2007, v. 8, p. 442, doi. 10.1186/1471-2105-8-442

By:

Marco, Antonio;
Marín, Ignacio

Publication type:

Article

Querying the public databases for sequences using complex keywords contained in the feature lines.

Published in:

BMC Bioinformatics, 2006, v. 7, p. 45, doi. 10.1186/1471-2105-7-45

By:

Croce, Olivier;
Lamarre, Michaël;
Christen, Richard

Publication type:

Article

galaxieEST: addressing EST identity through automated phylogenetic analysis.

Published in:

BMC Bioinformatics, 2004, v. 5, p. 87, doi. 10.1186/1471-2105-5-87

By:

Nilsson, R. Henrik;
Rajashekar, Balaji;
Larsson, Karl-Henrik;
Ursing, Björn M.

Publication type:

Article