Works matching DE "PDZ proteins"

Results: 54

Viral infection: Propelling vaccinia virus to the neighbours.

Published in:

Nature Reviews Microbiology, 2013, v. 11, n. 9, p. 595, doi. 10.1038/nrmicro3091

By:

David, Rachel

Publication type:

Article

Structure-based identification of CaMKIIα-interacting MUPP1 PDZ domains and rational design of peptide ligands to target such interaction in human fertilization.

Published in:

Amino Acids, 2016, v. 48, n. 6, p. 1509, doi. 10.1007/s00726-016-2211-6

By:

Zhang, Yi-Le;
Han, Zhao-Feng;
Sun, Ying-Pu

Publication type:

Article

LMDIPred: A web-server for prediction of linear peptide sequences binding to SH3, WW and PDZ domains.

Published in:

PLoS ONE, 2018, v. 13, n. 7, p. 1, doi. 10.1371/journal.pone.0200430

By:

Sarkar, Debasree;
Jana, Tanmoy;
Saha, Sudipto

Publication type:

Article

Regulation of ABCC6 Trafficking and Stability by a Conserved C-terminal PDZ-Like Sequence.

Published in:

PLoS ONE, 2014, v. 9, n. 5, p. 1, doi. 10.1371/journal.pone.0097360

By:

Xue, Peng;
Crum, Chelsea M.;
Thibodeau, Patrick H.

Publication type:

Article

The Role of Backbone Hydrogen Bonds in the Transition State for Protein Folding of a PDZ Domain.

Published in:

PLoS ONE, 2014, v. 9, n. 4, p. 1, doi. 10.1371/journal.pone.0095619

By:

Pedersen, Søren W.;
Hultqvist, Greta;
Strømgaard, Kristian;
Jemth, Per

Publication type:

Article

Characterization of Diverse Internal Binding Specificities of PDZ Domains by Yeast Two-Hybrid Screening of a Special Peptide Library.

Published in:

PLoS ONE, 2014, v. 9, n. 2, p. 1, doi. 10.1371/journal.pone.0088286

By:

Mu, Yi;
Cai, Pengfei;
Hu, Siqi;
Ma, Sucan;
Gao, Youhe

Publication type:

Article

New Conformational State of NHERF1-CXCR2 Signaling Complex Captured by Crystal Lattice Trapping.

Published in:

PLoS ONE, 2013, v. 8, n. 12, p. 1, doi. 10.1371/journal.pone.0081904

By:

Jiang, Yuanyuan;
Lu, Guorong;
Trescott, Laura R.;
Hou, Yuning;
Guan, Xiaoqing;
Wang, Shuo;
Stamenkovich, Angelique;
Brunzelle, Joseph;
Sirinupong, Nualpun;
Li, Chunying;
Yang, Zhe

Publication type:

Article

Disruption of 5-HT2A Receptor-PDZ Protein Interactions Alleviates Mechanical Hypersensitivity in Carrageenan-Induced Inflammation in Rats.

Published in:

PLoS ONE, 2013, v. 8, n. 9, p. 1, doi. 10.1371/journal.pone.0074661

By:

Wattiez, Anne-Sophie;
Pichon, Xavier;
Dupuis, Amandine;
Hernández, Alejandro;
Privat, Anne-Marie;
Aissouni, Youssef;
Chalus, Maryse;
Pelissier, Teresa;
Eschalier, Alain;
Marin, Philippe;
Courteix, Christine

Publication type:

Article

PDZ Domain-Mediated Interactions of G Protein-Coupled Receptors with Postsynaptic Density Protein 95: Quantitative Characterization of Interactions

Published in:

PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0063352

By:

Møller, Thor C.;
Wirth, Volker F.;
Roberts, Nina I.;
Bender, Julia;
Bach, Anders;
Jacky, Birgitte P. S.;
Strømgaard, Kristian;
Deussing, Jan M.;
Schwartz, Thue W.;
Martinez, Karen L.

Publication type:

Article

Prevalence, Specificity and Determinants of Lipid-Interacting PDZ Domains from an In-Cell Screen and In Vitro Binding Experiments.

Published in:

PLoS ONE, 2013, v. 8, n. 2, p. 1, doi. 10.1371/journal.pone.0054581

By:

Ivarsson, Ylva;
Wawrzyniak, Anna Maria;
Kashyap, Rudra;
Polanowska, Jolanta;
Betzi, Stéphane;
Lembo, Frédérique;
Vermeiren, Elke;
Chiheb, Driss;
Lenfant, Nicolas;
Morelli, Xavier;
Borg, Jean-Paul;
Reboul, Jérôme;
Zimmermann, Pascale

Publication type:

Article

Stressing the Ubiquitin-Proteasome System without 20S Proteolytic Inhibition Selectively Kills Cervical Cancer Cells.

Published in:

PLoS ONE, 2011, v. 6, n. 8, p. 1, doi. 10.1371/journal.pone.0023888

By:

Anchoori, Ravi K.;
Khan, Saeed R.;
Sueblinvong, Thanasak;
Felthauser, Alicia;
Iizuka, Yoshie;
Gavioli, Riccardo;
Destro, Federica;
Vogel, Rachel Isaksson;
Peng, Shiwen;
Roden, Richard B. S.;
Bazzaro, Martina

Publication type:

Article

A novel mutation in the PDZ-like motif of ZASP causes distal ZASP-related myofibrillar myopathy.

Published in:

Neuropathology, 2017, v. 37, n. 1, p. 45, doi. 10.1111/neup.12328

By:

Zheng, Junjun;
Chen, Shuyun;
Chen, Yunqing;
Zhu, Min;
Hong, Daojun

Publication type:

Article

modPDZpep: a web resource for structure based analysis of human PDZ-mediated interaction networks.

Published in:

Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0151-4

By:

Sain, Neetu;
Mohanty, Debasisa

Publication type:

Article

Zasp52, a Core Z-disc Protein in Drosophila Indirect Flight Muscles, Interacts with α-Actinin via an Extended PDZ Domain.

Published in:

PLoS Genetics, 2016, v. 12, n. 10, p. 1, doi. 10.1371/journal.pgen.1006400

By:

Liao, Kuo An;
González-Morales, Nicanor;
Schöck, Frieder

Publication type:

Article

Neuronal cell-surface protein neurexin 1 interaction with multi-PDZ domain protein MUPP1.

Published in:

Bioscience, Biotechnology & Biochemistry, 2014, v. 78, n. 4, p. 644, doi. 10.1080/09168451.2014.890031

By:

Won Hee Jang;
Sun Hee Choi;
Joo Young Jeong;
Jung-Hwa Park;
Sang-Jin Kim;
Dae-Hyun Seog

Publication type:

Article

The structure of a small GTPaseRhoA in complex with PDZRhoGEF and the inhibitor HL47.

Published in:

Biotechnology Letters, 2017, v. 39, n. 5, p. 745, doi. 10.1007/s10529-017-2292-7

By:

Yan, Zhaowei;
Ma, Sheng;
Zhang, Yan;
Ma, La;
Wang, Feng;
Li, Jian;
Miao, Liyan

Publication type:

Article

The CFTR-Associated Ligand Arrests the Trafficking of the Mutant ΔF508 CFTR Channel in the ER Contributing to Cystic Fibrosis.

Published in:

Cellular Physiology & Biochemistry (Karger AG), 2018, v. 45, n. 2, p. 639, doi. 10.1159/000487120

By:

Bergbower, Emily;
Boinot, Clement;
Sabirzhanova, Inna;
Guggino, William;
Cebotaru, Liudmila

Publication type:

Article

Differential Association of the Na/H+ Exchanger Regulatory Factor (NHERF) Family of Adaptor Proteins with the Raft- and the Non-Raft Brush Border Membrane Fractions of NHE3.

Published in:

Cellular Physiology & Biochemistry (Karger AG), 2013, v. 32, n. 5, p. 1386, doi. 10.1159/000356577

By:

Sultan, ayesha;
Luo, Min;
Yu, Qin;
Riederer, Brigitte;
Xia, Weiliang;
Chen, Mingmin;
Lissner, Simone;
Gessner, Johannes E.;
Donowitz, Mark;
Yun, C. Chris;
deJonge, Hugo;
Lamprecht, Georg;
Seidler, Ursula

Publication type:

Article

Response to Mechanical Cues by Interplay of YAP/TAZ Transcription Factors and Key Mechanical Checkpoints of the Cell: A Comprehensive Review.

Published in:

Cellular Physiology & Biochemistry (Cell Physiol Biochem Press GmbH & Co. KG), 2021, v. 55, n. 1, p. 33, doi. 10.33594/000000325

By:

Mosaddad, Seyed Ali;
Salari, Yalda;
Amookhteh, Samira;
Soufdoost, Reza Sayyad;
Seifalian, Alexander;
Bonakdar, Shahin;
Safaeinejad, Fahimeh;
Moghaddam, Mehrdad Moosazadeh;
Tebyanian, Hamid

Publication type:

Article

The emerging roles of YAP and TAZ in cancer.

Published in:

Nature Reviews Cancer, 2015, v. 15, n. 2, p. 73, doi. 10.1038/nrc3876

By:

Moroishi, Toshiro;
Hansen, Carsten Gram;
Guan, Kun-Liang

Publication type:

Article

Identification of PDZ Domain Containing Proteins Interacting with Cav1.2 and PMCA4b.

Published in:

ISRN Cell Biology, 2013, p. 1, doi. 10.1155/2013/265182

By:

Korb, Doreen;
Tng, Priscilla Y.;
Milenkovic, Vladimir M.;
Reichhart, Nadine;
Strauss, Olaf;
Ritter, Oliver;
Fischer, Tobias;
Benz, Peter M.;
Schuh, Kai

Publication type:

Article

Mechanism of ligand binding - PDZ domain taken as example.

Published in:

Bio-Algorithms & Med-Systems, 2017, v. 13, n. 4, p. 175, doi. 10.1515/bams-2017-0022

By:

Dułak, Dawid;
Banach, Mateusz;
Wiśniowski, Zdzisław;
Konieczny, Leszek;
Roterman, Irena

Publication type:

Article

Systematic family-wide analysis of sodium bicarbonate cotransporter NBCn1/ SLC4A7 interactions with PDZ scaffold proteins.

Published in:

Physiological Reports, 2014, v. 2, n. 5, p. n/a, doi. 10.14814/phy2.12016

By:

Lee, Hye Jeong;
Kwon, Min Hyung;
Lee, Soojung;
Hall, Randy A.;
Yun, C. Chris;
Choi, Inyeong

Publication type:

Article

A physics-based energy function allows the computational redesign of a PDZ domain.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-67972-w

By:

Opuu, Vaitea;
Sun, Young Joo;
Hou, Titus;
Panel, Nicolas;
Fuentes, Ernesto J.;
Simonson, Thomas

Publication type:

Article

Palmitoylation-dependent regulation of glutamate receptors and their PDZ domain-containing partners.

Published in:

Biochemical Society Transactions, 2013, v. 41, n. 1, p. 72, doi. 10.1042/BST20120223

By:

Thomas, Gareth M.;
Huganir, Richard L.

Publication type:

Article

Rigid Residue Scan Simulations Systematically Reveal Residue Entropic Roles in Protein Allostery.

Published in:

PLoS Computational Biology, 2016, v. 12, n. 4, p. 1, doi. 10.1371/journal.pcbi.1004893

By:

Kalescky, Robert;
Zhou, Hongyu;
Liu, Jin;
Tao, Peng

Publication type:

Article

A Dynamic View of Domain-Motif Interactions.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 1, p. 1, doi. 10.1371/journal.pcbi.1002341

By:

Akiva, Eyal;
Friedlander, Gilgi;
Itzhaki, Zohar;
Margalit, Hanah

Publication type:

Article

Effects of TAZ on human dental pulp stem cell proliferation and migration.

Published in:

Molecular Medicine Reports, 2017, v. 15, n. 6, p. 4326, doi. 10.3892/mmr.2017.6550

By:

ZHIYONG ZHANG;
HUIZHEN CHEN;
SONGBO TIAN;
JIE WANG;
XUQIAN LIU;
XIAOCHAO TIAN;
YANPING LIU;
FUSHENG DONG

Publication type:

Article

SAP97 promotes the stability of Nax channels at the plasma membrane

Published in:

FEBS Letters, 2012, v. 586, n. 21, p. 3805, doi. 10.1016/j.febslet.2012.09.018

By:

Matsumoto, Masahito;
Fujikawa, Akihiro;
Suzuki, Ryoko;
Shimizu, Hidetada;
Kuboyama, Kazuya;
Hiyama, Takeshi Y.;
Hall, Randy A.;
Noda, Masaharu

Publication type:

Article

Synthetic peptide arrays for investigating protein interaction domains

Published in:

FEBS Letters, 2012, v. 586, n. 17, p. 2780, doi. 10.1016/j.febslet.2012.04.028

By:

Volkmer, Rudolf;
Tapia, Victor;
Landgraf, Christiane

Publication type:

Article

The emerging contribution of sequence context to the specificity of protein interactions mediated by PDZ domains

Published in:

FEBS Letters, 2012, v. 586, n. 17, p. 2648, doi. 10.1016/j.febslet.2012.03.056

By:

Luck, Katja;
Charbonnier, Sebastian;
Travé, Gilles

Publication type:

Article

Plasticity of PDZ domains in ligand recognition and signaling

Published in:

FEBS Letters, 2012, v. 586, n. 17, p. 2638, doi. 10.1016/j.febslet.2012.04.015

By:

Ivarsson, Ylva

Publication type:

Article

Elucidation of the binding preferences of peptide recognition modules: SH3 and PDZ domains

Published in:

FEBS Letters, 2012, v. 586, n. 17, p. 2631, doi. 10.1016/j.febslet.2012.05.043

By:

Teyra, Joan;
Sidhu, Sachdev S.;
Kim, Philip M.

Publication type:

Article

Structural basis for PDZ domain interactions in the post‐synaptic density scaffolding protein Shank3.

Published in:

Journal of Neurochemistry, 2018, v. 145, n. 6, p. 449, doi. 10.1111/jnc.14322

By:

Ponna, Srinivas Kumar;
Ruskamo, Salla;
Myllykoski, Matti;
Keller, Corinna;
Kursula, Petri;
Boeckers, Tobias M.

Publication type:

Article

Synaptic adhesion molecules in Cadm family at the neuromuscular junction.

Published in:

Cell Biology International, 2013, v. 37, n. 7, p. 731, doi. 10.1002/cbin.10092

By:

Tanabe, Yuko;
Fujita, Eriko;
Hayashi, Yukiko K.;
Zhu, Xinran;
Lubbert, Hermann;
Mezaki, Yoshihiro;
Senoo, Haruki;
Momoi, Takashi

Publication type:

Article

YAP-Mediated Mechanotransduction in Skeletal Muscle.

Published in:

Frontiers in Physiology, 2016, p. 1, doi. 10.3389/fphys.2016.00041

By:

Fischer, Martina;
Rikeit, Paul;
Knaus, Petra;
Coirault, Catherine

Publication type:

Article

The Human Papillomavirus E6 PDZ Binding Motif: From Life Cycle to Malignancy.

Published in:

Viruses (1999-4915), 2015, v. 7, n. 7, p. 3530, doi. 10.3390/v7072785

By:

Broniarczyk, Justyna;
Mittal, Suruchi;
Ganti, Ketaki;
Szalmas, Anita;
Thatte, Jayashree;
Tomaić, Vjekoslav;
Manoubi, Wiem;
Pim, David;
Massimi, Paola;
Thomas, Miranda;
Banks, Lawrence

Publication type:

Article

Elevated expression of syntenin in breast cancer is correlated with lymph node metastasis and poor patient survival.

Published in:

Breast Cancer Research, 2013, v. 15, n. 3, p. 1, doi. 10.1186/bcr3442

By:

Yu Yang;
Qi Hong;
Pengcheng Shi;
Zhebin Liu;
Jianmin Luo;
Zhiming Shao

Publication type:

Article

The PDZ Protein Na+/H+ Exchanger Regulatory Factor-1 (NHERF1) Regulates Planar Cell Polarity and Motile Cilia Organization.

Published in:

PLoS ONE, 2016, v. 11, n. 4, p. 1, doi. 10.1371/journal.pone.0153144

By:

Treat, Anny Caceres;
Wheeler, David S.;
Stolz, Donna B.;
Tsang, Michael;
Friedman, Peter A.;
Romero, Guillermo

Publication type:

Article

Affinity Enhancement by Ligand Clustering Effect Inspired by Peptide Dendrimers−Shank PDZ Proteins Interactions.

Published in:

PLoS ONE, 2016, v. 11, n. 2, p. 1, doi. 10.1371/journal.pone.0149580

By:

Liu, Jiahui;
Liu, Miao;
Zheng, Bo;
Yao, Zhongping;
Xia, Jiang

Publication type:

Article

The Chlamydia trachomatis Protease CPAF Contains a Cryptic PDZ-Like Domain with Similarity to Human Cell Polarity and Tight Junction PDZ-Containing Proteins.

Published in:

PLoS ONE, 2016, v. 11, n. 2, p. 1, doi. 10.1371/journal.pone.0147233

By:

Maksimchuk, Kenneth R.;
Alser, Katherine A.;
Mou, Rui;
Valdivia, Raphael H.;
McCafferty, Dewey G.

Publication type:

Article

A PDZ-Like Motif in the Biliary Transporter ABCB4 Interacts with the Scaffold Protein EBP50 and Regulates ABCB4 Cell Surface Expression.

Published in:

PLoS ONE, 2016, v. 11, n. 1, p. 1, doi. 10.1371/journal.pone.0146962

By:

Venot, Quitterie;
Delaunay, Jean-Louis;
Fouassier, Laura;
Delautier, Danièle;
Falguières, Thomas;
Housset, Chantal;
Maurice, Michèle;
Aït-Slimane, Tounsia

Publication type:

Article

Understanding the role of phosphorylation in the binding mechanism of a PDZ domain.

Published in:

PEDS: Protein Engineering, Design & Selection, 2017, v. 30, n. 1, p. 1, doi. 10.1093/protein/gzw055

By:

Toto, Angelo;
Mattei, Annalisa;
Jemth, Per;
Gianni, Stefano

Publication type:

Article

Allosteric regulation of DegS protease subunits through a shared energy landscape.

Published in:

Nature Chemical Biology, 2013, v. 9, n. 2, p. 90, doi. 10.1038/nchembio.1135

By:

Mauldin, Randall V;
Sauer, Robert T

Publication type:

Article

Interaction of the Human Papillomavirus E6 Oncoprotein with Sorting Nexin 27 Modulates Endocytic Cargo Transport Pathways.

Published in:

PLoS Pathogens, 2016, v. 12, n. 9, p. 1, doi. 10.1371/journal.ppat.1005854

By:

Ganti, Ketaki;
Massimi, Paola;
Manzo-Merino, Joaquin;
Tomaić, Vjekoslav;
Pim, David;
Playford, Martin P.;
Lizano, Marcela;
Roberts, Sally;
Kranjec, Christian;
Doorbar, John;
Banks, Lawrence

Publication type:

Article

Analysis of Multiple HPV E6 PDZ Interactions Defines Type-Specific PDZ Fingerprints That Predict Oncogenic Potential.

Published in:

PLoS Pathogens, 2016, v. 12, n. 8, p. 1, doi. 10.1371/journal.ppat.1005766

By:

Thomas, Miranda;
Myers, Michael P.;
Massimi, Paola;
Guarnaccia, Corrado;
Banks, Lawrence

Publication type:

Article

Roles of the PDZ domain-binding motif of the human papillomavirus type 16 E6 on the immortalization and differentiation of primary human foreskin keratinocytes.

Published in:

Virus Genes, 2014, v. 48, n. 2, p. 224, doi. 10.1007/s11262-013-1017-9

By:

Choi, Moonju;
Lee, Sungjin;
Choi, Taekyu;
Lee, Choongho

Publication type:

Article

Accidental Interaction between PDZ Domains and Diclofenac Revealed by NMR-Assisted Virtual Screening.

Published in:

Molecules, 2013, v. 18, n. 8, p. 9567, doi. 10.3390/molecules18089567

By:

Takeshi Tenno;
Natsuko Goda;
Yoshitaka Umetsu;
Motonori Ota;
Kengo Kinoshita;
Hidekazu Hiroaki

Publication type:

Article

Arterial Wall Stress Induces Phenotypic Switching of Arterial Smooth Muscle Cells in Vascular Remodeling by Activating the YAP/TAZ Signaling Pathway.

Published in:

Cellular Physiology & Biochemistry (Karger AG), 2018, v. 51, n. 2, p. 842, doi. 10.1159/000495376

By:

Wang, Yongshun;
Cao, Wei;
Cui, Jinjin;
Yu, Yang;
Zhao, Yubo;
Shi, Jian;
Wu, Jian;
Xia, Zhengyuan;
Yu, Bo;
Liu, Jingjin

Publication type:

Article

Deciphering the unconventional peptide binding to the PDZ domain of MAST2.

Published in:

Biochemical Journal, 2015, v. 469, n. 1, p. 159, doi. 10.1042/BJ20141198

By:

Delhommel, Florent;
Chaffotte, Alain;
Terrien, Elouan;
Raynal, Bertrand;
Buc, Henri;
Delepierre, Muriel;
Cordier, Florence;
Wolff, Nicolas

Publication type:

Article