Works matching DE "PARACOCCUS denitrificans"

Results: 43

Steady-State Oxygen Isotope Effects of N2O Production in Paracoccus denitrificans.

Published in:

Microbial Ecology, 2017, v. 74, n. 3, p. 507, doi. 10.1007/s00248-017-0965-3

By:

Barford, Carol;
Montoya, Joseph;
Altabet, Mark;
Mitchell, Ralph

Publication type:

Article

Permanent draft genome of Thermithiobacillus tepidarius DSM 3134T, a moderately thermophilic, obligately chemolithoautotrophic member of the Acidithiobacillia.

Published in:

Standards in Genomic Sciences, 2016, p. 1, doi. 10.1186/s40793-016-0188-0

By:

Boden, Rich;
Hutt, Lee P.;
Huntemann, Marcel;
Clum, Alicia;
Pillay, Manoj;
Palaniappan, Krishnaveni;
Varghese, Neha;
Mikhailova, Natalia;
Stamatis, Dimitrios;
Reddy, Tatiparthi;
Chew Yee Ngan;
Daum, Chris;
Shapiro, Nicole;
Markowitz, Victor;
Ivanova, Natalia;
Woyke, Tanja;
Kyrpides, Nikos

Publication type:

Article

Fusion of an alcohol dehydrogenase with an aminotransferase using a PAS linker to improve coupled enzymatic alcohol-to-amine conversion.

Published in:

PEDS: Protein Engineering, Design & Selection, 2016, v. 29, n. 12, p. 557, doi. 10.1093/protein/gzw039

By:

Lerchner, Alexandra;
Daake, Marina;
Jarasch, Alexander;
Skerra, Arne

Publication type:

Article

A novel cold-active β-D-galactosidase from the Paracoccus sp. 32d - gene cloning, purification and characterization.

Published in:: Microbial Cell Factories, 2011, v. 10, n. Suppl 1, p. 108, doi. 10.1186/1475-2859-10-108
Publication type:: Article

Crystal structures of AztD provide mechanistic insights into direct zinc transfer between proteins.

Published in:

Communications Biology, 2019, v. 2, n. 1, p. N.PAG, doi. 10.1038/s42003-019-0542-z

By:

Neupane, Durga Prasad;
Fullam, Stephanie Hope;
Chacón, Kelly Natalia;
Yukl, Erik Thomas

Publication type:

Article

Low Probability of Initiating nirS Transcription Explains Observed Gas Kinetics and Growth of Bacteria Switching from Aerobic Respiration to Denitrification.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 11, p. 1, doi. 10.1371/journal.pcbi.1003933

By:

Hassan, Junaid;
Bergaust, Linda L.;
Wheat, I. David;
Bakken, Lars R.

Publication type:

Article

O2 versus N2O respiration in a continuous microbial enrichment.

Published in:

Applied Microbiology & Biotechnology, 2018, v. 102, n. 20, p. 8943, doi. 10.1007/s00253-018-9247-3

By:

Conthe, Monica;
Parchen, Camiel;
Stouten, Gerben;
Kleerebezem, Robbert;
van Loosdrecht, Mark C. M.

Publication type:

Article

Novel glyphosate-resistant aroA Gene from Paracoccus denitrificans in transgenic Arabidopsis.

Published in:

Applied Biochemistry & Microbiology, 2015, v. 51, n. 5, p. 566, doi. 10.1134/S0003683815050166

By:

Tian, Y.-S.;
Yao, Q.-H.;
Xing, X.-J.;
Peng, R.-H.;
Xu, J.;
Xiong, A.-S.

Publication type:

Article

Paracoccus denitrificans Oxidative Phosphorylation: Retentions, Gains, Losses, and Lessons En Route to Mitochondria.

Published in:

IUBMB Life, 2018, v. 70, n. 12, p. 1214, doi. 10.1002/iub.1962

By:

Ferguson, Stuart J.

Publication type:

Article

Correction: Investigating the Proton Donor in the NO Reductase from Paracoccus denitrificans.

Published in:

2016

By:

null, null

Publication type:

Correction Notice

Investigating the Proton Donor in the NO Reductase from Paracoccus denitrificans.

Published in:

PLoS ONE, 2016, v. 11, n. 3, p. 1, doi. 10.1371/journal.pone.0152745

By:

ter Beek, Josy;
Krause, Nils;
Ädelroth, Pia

Publication type:

Article

Carboxyl-modified single-walled carbon nanotubes negatively affect bacterial growth and denitrification activity.

Published in:

Scientific Reports, 2014, p. 1, doi. 10.1038/srep05653

By:

Xiong Zheng;
Yinglong Su;
Yinguang Chen;
Rui Wan;
Mu Li;
Yuanyuan Wei;
Haining Huang

Publication type:

Article

Zinc-Dependent Transcriptional Regulation in Paracoccus denitrificans.

Published in:

Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.00569

By:

Neupane, Durga P.;
Jacquez, Belkis;
Sundararajan, Anitha;
Ramaraj, Thiruvarangan;
Schilkey, Faye D.;
Yukl, Erik T.

Publication type:

Article

Genome-Wide Discovery of Putative sRNAs in Paracoccus denitrificans Expressed under Nitrous Oxide Emitting Conditions.

Published in:

Frontiers in Microbiology, 2016, v. 7, p. 1, doi. 10.3389/fmicb.2016.01806

By:

Gaimster, Hannah;
Chalklen, Lisa;
Alston, Mark;
Munnoch, John T.;
Richardson, David J.;
Gates, Andrew J.;
Rowley, Gary

Publication type:

Article

The P aracoccus denitrificans Nar K-like nitrate and nitrite transporters-probing nitrate uptake and nitrate/nitrite exchange mechanisms.

Published in:

Molecular Microbiology, 2017, v. 103, n. 1, p. 117, doi. 10.1111/mmi.13546

By:

Goddard, Alan D.;
Bali, Shilpa;
Mavridou, Despoina A.I.;
Luque‐Almagro, Victor M.;
Gates, Andrew J.;
Dolores Roldán, M.;
Newstead, Simon;
Richardson, David J.;
Ferguson, Stuart J.

Publication type:

Article

Paracoccus denitrificans can utilize various long‐chain N‐acyl homoserine lactones and sequester them in membrane vesicles.

Published in:

Environmental Microbiology Reports, 2018, v. 10, n. 6, p. 651, doi. 10.1111/1758-2229.12674

By:

Morinaga, Kana;
Yamamoto, Tatsuya;
Nomura, Nobuhiko;
Toyofuku, Masanori

Publication type:

Article

Transcriptional and translational adaptation to aerobic nitrate anabolism in the denitrifier Paracoccus denitrificans.

Published in:

Biochemical Journal, 2017, v. 474, n. 11, p. 1769, doi. 10.1042/BCJ20170115

By:

Luque-Almagro, Victor M.;
Manso, Isabel;
Sullivan, Matthew J.;
Rowley, Gary;
Ferguson, Stuart J.;
Moreno-Vivián, Conrado;
Richardson, David J.;
Gates, Andrew J.;
Roldán, M. Dolores

Publication type:

Article

Unexpected weak magnetic exchange coupling between haem and non-haem iron in the catalytic site of nitric oxide reductase (NorBC) from Paracoccus denitrificans.

Published in:

Biochemical Journal, 2013, v. 451, n. 3, p. 389, doi. 10.1042/BJ20121406

By:

VAN WONDEREN, Jessica H.;
OGANESYAN, Vasily S.;
WATMOUGH, Nicholas J.;
RICHARDSON, David J.;
THOMSON, Andrew J.;
CHEESMAN, Myles R.

Publication type:

Article

IDENTIFICATION OF ISOVALERYL-COA DEHYDROGENASE CATALYTIC RESIDUE IN PARACOCCUS DENITRIFICANS PD1222.

Published in:

Plant Archives (09725210), 2020, v. 20, n. 2, p. 3091

By:

Karim, Rafid M.

Publication type:

Article

IDENTIFICATION OF ISOVALERYL-COA DEHYDROGENASE CATALYTIC RESIDUE IN PARACOCCUS DENITRIFICANS PD1222.

Published in:

Plant Archives (09725210), 2020, v. 20, n. 1, p. 3091

By:

Karim, Rafid M.

Publication type:

Article

Exploring the Denitrification Proteome of Paracoccus denitrificans PD1222.

Published in:

Frontiers in Microbiology, 2018, p. 1, doi. 10.3389/fmicb.2018.01137

By:

Olaya-Abril, Alfonso;
Hidalgo-Carrillo, Jesús;
Luque-Almagro, Víctor M.;
Fuentes-Almagro, Carlos;
Urbano, Francisco J.;
Moreno-Vivián, Conrado;
Richardson, David J.;
Roldán, María D.

Publication type:

Article

Biokinetic Characterization and Activities of N2O-Reducing Bacteria in Response to Various Oxygen Levels.

Published in:

Frontiers in Microbiology, 2018, p. 1, doi. 10.3389/fmicb.2018.00697

By:

Suenaga, Toshikazu;
Riya, Shohei;
Hosomi, Masaaki;
Terada, Akihiko

Publication type:

Article

Enzyme level N and O isotope effects of assimilatory and dissimilatory nitrate reduction.

Published in:

Limnology & Oceanography, 2017, v. 62, n. 1, p. 272, doi. 10.1002/lno.10393

By:

Treibergs, Lija A.;
Granger, Julie

Publication type:

Article

Structure and Function of Bacterial Cytochrome c Oxidase.

Published in:

Journal of Biochemistry, 1998, v. 123, n. 3, p. 369, doi. 10.1093/oxfordjournals.jbchem.a021946

By:

Iwata, So

Publication type:

Article

Phospholipid Fatty Acids as Physiological Indicators of Paracoccus denitrificans Encapsulated in Silica Sol-Gel Hydrogels.

Published in:

Sensors (14248220), 2015, v. 15, n. 2, p. 3426, doi. 10.3390/s150203426

By:

TrÃgl, Josef;
JirkovÃ, Ivana;
KurÃÅ, Pavel;
Akhmetshina, Elmira;
BrovdyovÃ, TaÅ¥jÃna;
Sirotkin, Alexander;
Kirilina, Tatiana

Publication type:

Article

Effect of pH on the denitrification proteome of the soil bacterium Paracoccus denitrificans PD1222.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-96559-2

By:

Olaya-Abril, Alfonso;
Hidalgo-Carrillo, Jesús;
Luque-Almagro, Víctor M.;
Fuentes-Almagro, Carlos;
Urbano, Francisco J.;
Moreno-Vivián, Conrado;
Richardson, David J.;
Roldán, María Dolores

Publication type:

Article

Simultaneous quantification of energetically important metabolites in various cell types by CZE.

Published in:

Journal of Separation Science, 2013, v. 36, n. 23, p. 3807, doi. 10.1002/jssc.201300926

By:

Musilová, Jindra;
Klejdus, Bořivoj;
Glatz, Zdeněk

Publication type:

Article

Sequence and structure-based comparative analysis to assess, identify and improve the thermostability of penicillin G acylases.

Published in:

Journal of Industrial Microbiology & Biotechnology, 2015, v. 42, n. 11, p. 1493, doi. 10.1007/s10295-015-1690-x

By:

Panigrahi, Priyabrata;
Chand, Deepak;
Mukherji, Ruchira;
Ramasamy, Sureshkumar;
Suresh, C.

Publication type:

Article

Biochemical properties of Paracoccus denitrificans FnrP: reactions with molecular oxygen and nitric oxide.

Published in:

Journal of Biological Inorganic Chemistry (JBIC), 2016, v. 21, n. 1, p. 71, doi. 10.1007/s00775-015-1326-7

By:

Crack, Jason;
Hutchings, Matthew;
Thomson, Andrew;
Brun, Nick

Publication type:

Article

Determination of low concentration of Paracoccus denitrificans encapsulated in polyvinyl alcohol LentiKat's pellets.

Published in:

Applied Microbiology & Biotechnology, 2012, v. 94, n. 5, p. 1359, doi. 10.1007/s00253-012-4073-5

By:

Vacková, Lenka;
Stloukal, Radek;
Wanner, Jiří

Publication type:

Article

Molecular determinants for substrate selectivity of ω-transaminases.

Published in:

Applied Microbiology & Biotechnology, 2012, v. 93, n. 6, p. 2425, doi. 10.1007/s00253-011-3584-9

By:

Park, Eul-Soo;
Kim, Minji;
Shin, Jong-Shik

Publication type:

Article

Biodegradation of Isopropanol by a Solvent-Tolerant Paracoccus denitrificans Strain.

Published in:

Preparative Biochemistry & Biotechnology, 2015, v. 45, n. 5, p. 491, doi. 10.1080/10826068.2014.923452

By:

Geng, Yucong;
Deng, Yuanjie;
Chen, Feilong;
Jin, Hong;
Tao, Ke;
Hou, Taiping

Publication type:

Article

Biosynthesis of Poly-3-Hydroxybutyrate (PHB) from Glycerol by Paracoccus denitrificans in a Batch Bioreactor: Effect of Process Variables.

Published in:

Preparative Biochemistry & Biotechnology, 2015, v. 45, n. 1, p. 69, doi. 10.1080/10826068.2014.887582

By:

Kalaiyezhini, D.;
Ramachandran, K.B.

Publication type:

Article

Studies on the Glutathione-Dependent Formaldehyde-Activating Enzyme from Paracoccus denitrificans.

Published in:

PLoS ONE, 2015, v. 10, n. 12, p. 1, doi. 10.1371/journal.pone.0145085

By:

Hopkinson, Richard J.;
Leung, Ivanhoe K. H.;
Smart, Tristan J.;
Rose, Nathan R.;
Henry, Luc;
Claridge, Timothy D. W.;
Schofield, Christopher J.

Publication type:

Article

The Structural and Functional Basis of Catalysis Mediated by NAD(P)H:acceptor Oxidoreductase (FerB) of Paracoccus denitrificans.

Published in:

PLoS ONE, 2014, v. 9, n. 5, p. 1, doi. 10.1371/journal.pone.0096262

By:

Sedláček, Vojtěch;
Klumpler, Tomáš;
Marek, Jaromír;
Kučera, Igor

Publication type:

Article

Inhibition of 1, 4-dioxane on the denitrification process by altering the viability and metabolic activity of Paracoccus denitrificans.

Published in:

Environmental Science & Pollution Research, 2018, v. 25, n. 27, p. 27274, doi. 10.1007/s11356-018-2642-6

By:

Luo, Jingyang;
Zhang, Qin;
Wu, Lijuan;
Cao, Jiashun;
Feng, Qian;
Fang, Fang;
Chen, Yinguang

Publication type:

Article

Autotrophic, Heterotrophic, and Mixotrophic Nitrogen Assimilation for Single-Cell Protein Production by Two Hydrogen-Oxidizing Bacterial Strains.

Published in:

Applied Biochemistry & Biotechnology, 2019, v. 187, n. 1, p. 338, doi. 10.1007/s12010-018-2824-1

By:

Dou, Junwei;
Huang, Yanmeng;
Ren, Haiwei;
Li, Zhizhong;
Cao, Qin;
Liu, Xiaofeng;
Li, Dong

Publication type:

Article

Expanding Substrate Specificity of ω-Transaminase by Rational Remodeling of a Large Substrate-Binding Pocket.

Published in:

Advanced Synthesis & Catalysis, 2015, v. 357, n. 12, p. 2712, doi. 10.1002/adsc.201500239

By:

Han, Sang ‐ Woo;
Park, Eul ‐ Soo;
Dong, Joo ‐ Young;
Shin, Jong ‐ Shik

Publication type:

Article

Structural Determinants for the Non-Canonical Substrate Specificity of the ω-Transaminase from Paracoccus denitrificans.

Published in:

Advanced Synthesis & Catalysis, 2014, v. 356, n. 1, p. 212, doi. 10.1002/adsc.201300786

By:

Park, Eul ‐ Soo;
Park, Sae ‐ Rom;
Han, Sang ‐ Woo;
Dong, Joo ‐ Young;
Shin, Jong ‐ Shik

Publication type:

Article

Oxidative phosphorylation and respiratory control phenomenon in Paracoccus denitrificans plasma membrane.

Published in:

Biochemistry (00062979), 2012, v. 77, n. 9, p. 1000, doi. 10.1134/S0006297912090064

By:

Zharova, T.;
Vinogradov, A.

Publication type:

Article

Engineering chimeric two-component system into Escherichia coli from Paracoccus denitrificans to sense methanol.

Published in:

Biotechnology & Bioprocess Engineering, 2017, v. 22, n. 3, p. 225, doi. 10.1007/s12257-016-0484-y

By:

Selvamani, Vidhya;
Ganesh, Irisappan;
Maruthamuthu, Murali;
Eom, Gyeong;
Hong, Soon

Publication type:

Article

Molecular, Physiological and Phenotypic Characterization of Paracoccus denitrificans ATCC 19367 Mutant Strain P-87 Producing Improved Coenzyme Q.

Published in:

Indian Journal of Microbiology, 2015, v. 55, n. 2, p. 184, doi. 10.1007/s12088-014-0506-4

By:

Tokdar, Pradipta;
Sanakal, Akshata;
Ranadive, Prafull;
George, Saji;
Deshmukh, Sunil;
Khora, Samanta

Publication type:

Article

The ζ subunit of the F1Fo-ATP synthase of α-proteobacteria controls rotation of the nanomotor with a different structure.

Published in:

FASEB Journal, 2014, v. 28, n. 5, p. 2146, doi. 10.1096/fj.13-241430

By:

Zarco-Zavala, Mariel;
Morales-Ríos, Edgar;
Mendoza-Hernández, Guillermo;
Ramírez-Silva, Leticia;
Pérez-Hernández, Gerardo;
Garcia-Trejo, José J.

Publication type:

Article