Works matching DE "OPERONS"

Results: 1917

The excludon: a new concept in bacterial antisense RNA-mediated gene regulation.

Published in:

Nature Reviews Microbiology, 2013, v. 11, n. 2, p. 75, doi. 10.1038/nrmicro2934

By:

Sesto, Nina;
Wurtzel, Omri;
Archambaud, Cristel;
Sorek, Rotem;
Cossart, Pascale

Publication type:

Article

Evolution and classification of the CRISPR-Cas systems.

Published in:

2011

By:

Makarova, Kira S.;
Haft, Daniel H.;
Barrangou, Rodolphe;
Brouns, Stan J. J.;
Charpentier, Emmanuelle;
Horvath, Philippe;
Moineau, Sylvain;
Mojica, Francisco J. M.;
Wolf, Yuri I.;
Yakunin, Alexander F.;
van der Oost, John;
Koonin, Eugene V.

Publication type:

Opinion

Biofilms to die for...

Published in:

Nature Reviews Microbiology, 2007, v. 5, n. 6, p. 398, doi. 10.1038/nrmicro1684

By:

O'Connell, David

Publication type:

Article

Differential assembly of polypeptides of the light-harvesting 2 complex encoded by distinct operons during acclimation of Rhodobacter sphaeroides to low light intensity.

Published in:

Photosynthesis Research, 2011, v. 108, n. 2/3, p. 201, doi. 10.1007/s11120-011-9681-x

By:

Woronowicz, Kamil;
Olubanjo, Oluwatobi;
Sung, Hee;
Lamptey, Joana;
Niederman, Robert

Publication type:

Article

Operon structure optimization by random self-assembly.

Published in:

Natural Computing, 2010, v. 9, n. 1, p. 173, doi. 10.1007/s11047-009-9141-0

By:

Nakagawa, Yusuke;
Yugi, Katsuyuki;
Tsuge, Kenji;
Itaya, Mitsuhiro;
Yanagawa, Hiroshi;
Sakakibara, Yasubumi

Publication type:

Article

Influence of the Changjiang River Flood on Synechococcus Ecology in the Surface Waters of the East China Sea.

Published in:

Microbial Ecology, 2014, v. 67, n. 2, p. 273, doi. 10.1007/s00248-013-0299-8

By:

Chung, Chih-Ching;
Huang, Chin-Yi;
Gong, Gwo-Ching;
Lin, Yun-Chi

Publication type:

Article

Intra- and Intergenomic Variation of Ribosomal RNA Operons in Concurrent Alteromonas macleodii Strains.

Published in:

Microbial Ecology, 2013, v. 65, n. 3, p. 720, doi. 10.1007/s00248-012-0153-4

By:

López-Pérez, Mario;
Gonzaga, Aitor;
Martin-Cuadrado, Ana-Belen;
López-García, Purificación;
Rodriguez-Valera, Francisco;
Kimes, Nikole

Publication type:

Article

Molecular approaches to pathogenesis study of Burkholderia cenocepacia, an important cystic fibrosis opportunistic bacterium.

Published in:

Applied Microbiology & Biotechnology, 2011, v. 92, n. 5, p. 887, doi. 10.1007/s00253-011-3616-5

By:

Bazzini, Silvia;
Udine, Claudia;
Riccardi, Giovanna

Publication type:

Article

Amino acid production from rice straw and wheat bran hydrolysates by recombinant pentose-utilizing Corynebacterium glutamicum.

Published in:

Applied Microbiology & Biotechnology, 2011, v. 92, n. 5, p. 985, doi. 10.1007/s00253-011-3478-x

By:

Gopinath, Vipin;
Meiswinkel, Tobias;
Wendisch, Volker;
Nampoothiri, K.

Publication type:

Article

Bioinformatics and molecular approaches to detect NRPS genes involved in the biosynthesis of kurstakin from Bacillus thuringiensis.

Published in:

Applied Microbiology & Biotechnology, 2011, v. 92, n. 3, p. 571, doi. 10.1007/s00253-011-3453-6

By:

Abderrahmani, Ahmed;
Tapi, Arthur;
Nateche, Farida;
Chollet, Marlène;
Leclère, Valérie;
Wathelet, Bernard;
Hacene, Hocine;
Jacques, Philippe

Publication type:

Article

Characterization of the mannitol catabolic operon of Corynebacterium glutamicum.

Published in:

Applied Microbiology & Biotechnology, 2011, v. 91, n. 5, p. 1375, doi. 10.1007/s00253-011-3352-x

By:

Xue Peng;
Okai, Naoko;
Vertès, Alain A.;
Inatomi, Ken-ichi;
Inui, Masayuki;
Yukawa, Hideaki

Publication type:

Article

Co-transcription of the celC gene cluster in Clostridium thermocellum.

Published in:

Applied Microbiology & Biotechnology, 2011, v. 90, n. 2, p. 625, doi. 10.1007/s00253-011-3121-x

By:

Newcomb, Michael;
Millen, Jonathan;
Chun-Yu Chen;
Wu, J. H. David

Publication type:

Article

Regulation of acetoin and 2,3-butanediol utilization in Bacillus licheniformis.

Published in:

Applied Microbiology & Biotechnology, 2010, v. 87, n. 6, p. 2227, doi. 10.1007/s00253-010-2681-5

By:

Trung Nguyen Thanh;
Jürgen, Britta;
Bauch, Melanie;
Liebeke, Manuel;
Lalk, Michael;
Ehrenreich, Armin;
Evers, Stefan;
Maurer, Karl-Heinz;
Antelmann, Haike;
Ernst, Florian;
Homuth, Georg;
Hecker, Michael;
Schweder, Thomas

Publication type:

Article

Construction and expression of immunogenic hybrid enterotoxigenic Escherichia coli CFA/I and CS2 colonization fimbriae for use in vaccines.

Published in:

Applied Microbiology & Biotechnology, 2010, v. 87, n. 4, p. 1355, doi. 10.1007/s00253-010-2577-4

By:

Tobias, Joshua;
Svennerholm, Ann-Mari;
Holmgren, Jan;
Lebens, Michael

Publication type:

Article

Genomic structure and promoter analysis of the dsz operon for dibenzothiophene biodesulfurization from Gordonia alkanivorans RIPI90A.

Published in:

Applied Microbiology & Biotechnology, 2010, v. 87, n. 4, p. 1455, doi. 10.1007/s00253-010-2605-4

By:

Shavandi, Mahmoud;
Sadeghizadeh, Majid;
Khajeh, Khosro;
Mohebali, Ghasemali;
Zomorodipour, Alireza

Publication type:

Article

Functional analysis of genes for benzoate metabolism in the albicidin biosynthetic region of Xanthomonas albilineans.

Published in:

Applied Microbiology & Biotechnology, 2010, v. 87, n. 4, p. 1475, doi. 10.1007/s00253-010-2620-5

By:

Hashimi, Saeed M.;
Birch, Robert G.

Publication type:

Article

Engineering expression of the heavy metal transporter MerC in Saccharomyces cerevisiae for increased cadmium accumulation.

Published in:

Applied Microbiology & Biotechnology, 2010, v. 86, n. 2, p. 753, doi. 10.1007/s00253-009-2402-0

By:

Kiyono, Masako;
Miyahara, Kiyomi;
Sone, Yuka;
Pan-Hou, Hidemitsu;
Uraguchi, Shimpei;
Nakamura, Ryosuke;
Sakabe, Kou

Publication type:

Article

Proline reduces the binding of transcriptional regulator ArgR to upstream of argB in Corynebacterium glutamicum.

Published in:

Applied Microbiology & Biotechnology, 2010, v. 86, n. 1, p. 235, doi. 10.1007/s00253-009-2264-5

By:

Soo Youn Lee;
Hwa Sung Shin;
Jin-Soo Park;
Yang-Hoon Kim;
Jiho Min

Publication type:

Article

Application of promoter swapping techniques to control expression of chromosomal genes.

Published in:

Applied Microbiology & Biotechnology, 2009, v. 84, n. 4, p. 641, doi. 10.1007/s00253-009-2137-y

By:

McCleary, William R.

Publication type:

Article

Overexpression of NAD kinase in recombinant Escherichia coli harboring the phbCAB operon improves poly(3-hydroxybutyrate) production.

Published in:

Applied Microbiology & Biotechnology, 2009, v. 83, n. 5, p. 939, doi. 10.1007/s00253-009-1943-6

By:

Li, Zheng-Jun;
Cai, Lei;
Wu, Qiong;
Chen, Guo-Qiang

Publication type:

Article

Microbial production of 3-hydroxydodecanoic acid by pha operon and fadBA knockout mutant of Pseudomonas putida KT2442 harboring tesB gene.

Published in:

Applied Microbiology & Biotechnology, 2009, v. 83, n. 3, p. 513, doi. 10.1007/s00253-009-1919-6

By:

Chung, Ahleum;
Liu, Qian;
Ouyang, Shao-Ping;
Wu, Qiong;
Chen, Guo-Qiang

Publication type:

Article

Characterization of a ring-hydroxylating dioxygenase from phenanthrene-degrading Sphingomonas sp. strain LH128 able to oxidize benz[ a]anthracene.

Published in:

Applied Microbiology & Biotechnology, 2009, v. 83, n. 3, p. 465, doi. 10.1007/s00253-009-1858-2

By:

Schuler, Luc;
Jouanneau, Yves;
Ní Chadhain, Sinéad;
Meyer, Christine;
Pouli, Maria;
Zylstra, Gerben;
Hols, Pascal;
Agathos, Spiros

Publication type:

Article

Continuous cultures of Pseudomonas putida mt-2 overcome catabolic function loss under real case operating conditions.

Published in:

Applied Microbiology & Biotechnology, 2009, v. 83, n. 1, p. 189, doi. 10.1007/s00253-009-1928-5

By:

Muñoz, Raúl;
Hernández, María;
Segura, Ana;
Gouveia, Joao;
Rojas, Antonia;
Ramos, Juan;
Villaverde, Santiago

Publication type:

Article

Involvement of PEG-carboxylate dehydrogenase and glutathione S-transferase in PEG metabolism by Sphingopyxis macrogoltabida strain 103.

Published in:

Applied Microbiology & Biotechnology, 2008, v. 81, n. 3, p. 473, doi. 10.1007/s00253-008-1635-7

By:

Somyoonsap, Peechapack;
Tani, Akio;
Charoenpanich, Jittima;
Minami, Toshiyuki;
Kimbara, Kazuhide;
Kawai, Fusako

Publication type:

Article

Identification of an uptake hydrogenase for hydrogen-dependent dissimilatory azoreduction by Shewanella decolorationis S12.

Published in:

Applied Microbiology & Biotechnology, 2008, v. 80, n. 3, p. 517, doi. 10.1007/s00253-008-1597-9

By:

Hong, Yi-Guo;
Guo, Jun;
Sun, Guo-Ping

Publication type:

Article

Genetic and biochemical characterization of a 4-hydroxybenzoate hydroxylase from Corynebacterium glutamicum.

Published in:

Applied Microbiology & Biotechnology, 2008, v. 78, n. 1, p. 75, doi. 10.1007/s00253-007-1286-0

By:

Yan Huang;
Ke-xin Zhao;
Xi-Hui Shen;
Chen-Ying Jiang;
Shuang-Jiang Liu

Publication type:

Article

Cloning of srfA operon from Bacillus subtilis C9 and its expression in E. coli.

Published in:

Applied Microbiology & Biotechnology, 2007, v. 75, n. 3, p. 567, doi. 10.1007/s00253-007-0845-8

By:

Young-Ki Lee;
Byung-Dae Yoon;
Jung-Hoon Yoon;
Seung-Goo Lee;
Jae Jun Song;
Jong-Guk Kim;
Hee-Mock Oh;
Hee-Sik Kim

Publication type:

Article

Isolation and characterization of naphthalene-catabolic genes and plasmids from oil-contaminated soil by using two cultivation-independent approaches.

Published in:

Applied Microbiology & Biotechnology, 2007, v. 74, n. 2, p. 501, doi. 10.1007/s00253-006-0671-4

By:

Ono, Akira;
Miyazaki, Ryo;
Sota, Masahiro;
Ohtsubo, Yoshiyuki;
Nagata, Yuji;
Tsuda, Masataka

Publication type:

Article

Targeted deletion of the uvrBA operon and biological containment in the industrially important Bacillus licheniformis.

Published in:

Applied Microbiology & Biotechnology, 2007, v. 73, n. 6, p. 1340, doi. 10.1007/s00253-006-0602-4

By:

Waldeck, Jens;
Meyer-Rammes, Heike;
Nahrstedt, Hannes;
Eichstädt, Renée;
Wieland, Susanne;
Meinhardt, Friedhelm

Publication type:

Article

An acetoin-regulated expression system of Bacillus subtilis.

Published in:

Applied Microbiology & Biotechnology, 2006, v. 73, n. 4, p. 895, doi. 10.1007/s00253-006-0549-5

By:

Silbersack, Jörg;
Jürgen, Britta;
Hecker, Michael;
Schneidinger, Bernd;
Schmuck, Rainer;
Schweder, Thomas

Publication type:

Article

Characterization of the ask–asd operon in aminoethoxyvinylglycine-producing Streptomyces sp. NRRL 5331.

Published in:

Applied Microbiology & Biotechnology, 2004, v. 64, n. 2, p. 228, doi. 10.1007/s00253-003-1440-2

By:

Cuadrado, Y.;
Fernández, M.;
Recio, E.;
Aparicio, J. F.;
Martín, J. F.

Publication type:

Article

Identification and functional characterization of a type I signal peptidase gene of Bacillus megaterium DSM319.

Published in:

Applied Microbiology & Biotechnology, 2004, v. 64, n. 2, p. 243, doi. 10.1007/s00253-003-1469-2

By:

Nahrstedt, H.;
Wittchen, K. D.;
Rachman, M. A.;
Meinhardt, F.

Publication type:

Article

Effects of transcription induction homogeneity and transcript stability on expression of two genes in a constructed operon.

Published in:

Applied Microbiology & Biotechnology, 2001, v. 57, n. 5/6, p. 689, doi. 10.1007/s002530100812

By:

Smolke, C. D.;
Khlebnikov, A.;
Keasling, J. D.

Publication type:

Article

H<sup>+</sup>-ATPase defect in Corynebacterium glutamicum abolishes glutamic acid production with enhancement of glucose consumption rate.

Published in:

Applied Microbiology & Biotechnology, 2001, v. 57, n. 4, p. 534, doi. 10.1007/s002530100778

By:

Sekine, H.;
Shimada, T.;
Hayashi, C.;
Ashiguro, A.;
Tomita, F.;
Yokota, A.

Publication type:

Article

The mer operon of a mercury-resistant Pseudoalteromonas haloplanktis strain isolated from Minamata Bay, Japan.

Published in:

Applied Microbiology & Biotechnology, 2001, v. 56, n. 5/6, p. 736, doi. 10.1007/s002530100734

By:

Iohara, K.;
Iiyama, R.;
Nakamura, K.;
Silver, S.;
Sakai, M.;
Takeshita, M.;
Furukawa, K.

Publication type:

Article

The role of EGY2 protease in response to high light stress.

Published in:

Functional Plant Biology, 2024, v. 51, n. 2, p. 1, doi. 10.1071/FP23243

By:

Luciński, Robert;
Dobrogojski, Jędrzej;
Takao Ishikawa;
Adamiec, Małgorzata

Publication type:

Article

Antitoxin autoregulation of M. tuberculosis toxinantitoxin expression through negative cooperativity arising from multiple inverted repeat sequencess.

Published in:

Biochemical Journal, 2020, v. 477, n. 12, p. 2401, doi. 10.1042/BCJ20200368

By:

Beck, Izaak N.;
Usher, Ben;
Hampton, Hannah G.;
Fineran, Peter C.;
Blower, Tim R.

Publication type:

Article

Notes on the biogeography of non-marine planktonic picocyanobacteria: re-evaluating novelty.

Published in:

Journal of Plankton Research, 2011, v. 33, n. 10, p. 1622, doi. 10.1093/plankt/fbr051

By:

Felföldi, Tamás;
Somogyi, Boglárka;
Márialigeti, Károly;
Vörös, Lajos

Publication type:

Article

Evaluation and validation of de novo and hybrid assembly techniques to derive high-quality genome sequences.

Published in:

Bioinformatics, 2014, v. 30, n. 19, p. 2709, doi. 10.1093/bioinformatics/btu391

By:

Utturkar, Sagar M.;
Klingeman, Dawn M.;
Land, Miriam L.;
Schadt, Christopher W.;
Doktycz, Mitchel J.;
Pelletier, Dale A.;
Brown, Steven D.

Publication type:

Article

PPO: Predictor for Prokaryotic Operons.

Published in:

Bioinformatics, 2010, v. 26, n. 24, p. 3127, doi. 10.1093/bioinformatics/btq601

By:

Chuang, Li-Yeh;
Tsai, Jui-Hung;
Yang, Cheng-Hong

Publication type:

Article

Pathway discovery in metabolic networks by subgraph extraction.

Published in:

Bioinformatics, 2010, v. 26, n. 9, p. 1211, doi. 10.1093/bioinformatics/btq105

By:

Faust, Karoline;
Dupont, Pierre;
Callut, Jéróme;
van Helden, Jacques;
Wren, Jonathan

Publication type:

Article

LOCP--locating pilus operons in Gram-positive bacteria.

Published in:

Bioinformatics, 2009, v. 25, n. 9, p. 1187, doi. 10.1093/bioinformatics/btp127

By:

Ilya Plyusnin;
Liisa Holm;
Matti Kankainen

Publication type:

Article

Detecting gene clusters under evolutionary constraint in a large number of genomes.

Published in:

Bioinformatics, 2009, v. 25, n. 5, p. 571, doi. 10.1093/bioinformatics/btp027

By:

Xu Ling;
Xin He;
Dong Xin

Publication type:

Article

Extraction of correlated gene clusters from multiple genomic data by generalized kernel canonical correlation analysis.

Published in:

Bioinformatics, 2009, v. 19, p. 323

By:

Y. Yamanishi;
Vert J.-P.;
A. Nakaya;
M. Kanehisa

Publication type:

Article

MINOMICS: visualizing prokaryote transcriptomics and proteomics data in a genomic context.

Published in:

Bioinformatics, 2009, v. 25, n. 1, p. 139, doi. 10.1093/bioinformatics/btn588

By:

Brouwer, Rutger W. W.;
Hijum, Sacha A. F. T. van;
Kuipers, Oscar P.

Publication type:

Article

Production of Astaxanthin Using CBFD1/HFBD1 from Adonis aestivalis and the Isopentenol Utilization Pathway in Escherichia coli.

Published in:

Bioengineering (Basel), 2023, v. 10, n. 9, p. 1033, doi. 10.3390/bioengineering10091033

By:

Roth, Jared H.;
Ward, Valerie C. A.

Publication type:

Article

MicroRNA clustering on the biogenesis of suboptimal microRNAs.

Published in:

Applied Biological Chemistry, 2021, v. 64, n. 1, p. 1, doi. 10.1186/s13765-021-00624-3

By:

Park, Sehee;
Kang, Igojo;
Shin, Chanseok

Publication type:

Article

Ribulose 1,5-Bisphosphate Carboxylase/Oxygenase Is Required in Bradyrhizobium diazoefficiens for Efficient Soybean Root Colonization and Competition for Nodulation.

Published in:

Plants (2223-7747), 2024, v. 13, n. 17, p. 2362, doi. 10.3390/plants13172362

By:

Balda, Rocío S.;
Cogo, Carolina;
Falduti, Ornella;
Bongiorno, Florencia M.;
Brignoli, Damián;
Sandobal, Tamara J.;
Althabegoiti, María Julia;
Lodeiro, Aníbal R.

Publication type:

Article

纤维二糖利用基因簇对巴氏链球菌生长及毒力的影响.

Published in:

Journal of Nanjing Agricultural University / Nanjuing Nongye Daxue Xuebao, 2024, v. 47, n. 5, p. 923, doi. 10.7685/jnau.202309027

By:

李鑫椿;
王硕玥;
吴宗福

Publication type:

Article

一种新的猪链球菌整合性接合元件的鉴定及环化分析.

Published in:

Journal of Nanjing Agricultural University / Nanjuing Nongye Daxue Xuebao, 2021, v. 44, n. 6, p. 1125, doi. 10.7685/jnau.202011010

By:

何培娟;
潘子豪;
古其兵;
张越;
,姚火春

Publication type:

Article