Works about MOLECULAR structure of chromatin

Results: 498

Linking Stochastic Fluctuations in Chromatin Structure and Gene Expression.

Published in:

PLoS Biology, 2013, v. 11, n. 8, p. 1, doi. 10.1371/journal.pbio.1001621

By:

Brown, Christopher R.;
Mao, Changhui;
Falkovskaia, Elena;
Jurica, Melissa S.;
Boeger, Hinrich

Publication type:

Article

A Conserved Role for Human Nup98 in Altering Chromatin Structure and Promoting Epigenetic Transcriptional Memory.

Published in:

PLoS Biology, 2013, v. 11, n. 3, p. 1, doi. 10.1371/journal.pbio.1001524

By:

Light, William H.;
Freaney, Jonathan;
Sood, Varun;
Thompson, Abbey;
D'Urso, Agustina;
Horvath, Curt M.;
Brickner, Jason H.

Publication type:

Article

Chromatin Proteins: Key Responders to Stress.

Published in:

PLoS Biology, 2012, v. 10, n. 7, p. 1, doi. 10.1371/journal.pbio.1001371

By:

Smith, Karen T.;
Workman, Jerry L.

Publication type:

Article

A shift to 50°C provokes death in distinct ways for glucose- and oleate-grown cells of Yarrowia lipolytica.

Published in:

Applied Microbiology & Biotechnology, 2012, v. 93, n. 5, p. 2125, doi. 10.1007/s00253-011-3537-3

By:

Ta, Thi;
Cao-Hoang, Lan;
Romero-Guido, Cynthia;
Lourdin, Morgane;
Phan-Thi, Hanh;
Goudot, Sébastien;
Marechal, Pierre-André;
Waché, Yves

Publication type:

Article

Super-resolution microscopy reveals decondensed chromatin structure at transcription sites.

Published in:

Scientific Reports, 2014, p. 1, doi. 10.1038/srep04477

By:

Yejun Wang;
Maharana, Shovamayee;
Wang, Michelle D.;
Shivashankar, G. V.

Publication type:

Article

Chromatin structure, epigenetic mechanisms and long-range interactions in the human insulin locus.

Published in:

Diabetes, Obesity & Metabolism, 2012, v. 14, p. 1, doi. 10.1111/j.1463-1326.2012.01645.x

By:

Xu, Z.;
Lefevre, G. M.;
Felsenfeld, G.

Publication type:

Article

MECP2, a multi-talented modulator of chromatin architecture.

Published in:

Briefings in Functional Genomics, 2016, v. 15, n. 6, p. 420, doi. 10.1093/bfgp/elw023

By:

Ragione, Floriana Della;
Vacca, Marcella;
Fioriniello, Salvatore;
Pepe, Giuseppe;
D'Esposito, Maurizio

Publication type:

Article

Epigenetic mechanisms and developmental choice hierarchies in T-lymphocyte development.

Published in:

Briefings in Functional Genomics, 2013, v. 12, n. 6, p. 512, doi. 10.1093/bfgp/elt027

By:

Rothenberg, Ellen V.

Publication type:

Article

Mouse models in epigenetics: insights in development and disease.

Published in:

Briefings in Functional Genomics, 2013, v. 12, n. 3, p. 279, doi. 10.1093/bfgp/elt005

By:

Espada, Jesús;
Esteller, Manel

Publication type:

Article

Replicating and transcribing on twisted roads of chromatin.

Published in:

Briefings in Functional Genomics, 2012, v. 11, n. 3, p. 188, doi. 10.1093/bfgp/elr047

By:

Giri, Sumanprava;
Prasanth, Supriya G.

Publication type:

Article

Control of V(D)J Recombination through Transcriptional Elongation and Changes in Locus Chromatin Structure and Nuclear Organization.

Published in:

Genetics Research International, 2011, p. 1, doi. 10.4061/2011/970968

By:

Blanco, Beatriz del;
García, Vanina;
García-Mariscal, Alberto;
Hernández-Munain, Cristina

Publication type:

Article

Transcriptional Elongation and mRNA Export Are Coregulated Processes.

Published in:

Genetics Research International, 2011, p. 1, doi. 10.4061/2011/652461

By:

Molina-Navarro, Maria Micaela;
Martinez-Jimenez, Celia Pilar;
Rodriguez-Navarro, Susana

Publication type:

Article

RNA Polymerase II Elongation at the Crossroads of Transcription and Alternative Splicing.

Published in:

Genetics Research International, 2011, p. 1, doi. 10.4061/2011/309865

By:

Mata, Manuel de la;
Muñoz, Manuel J.;
Alló, Mariano;
Fededa, Juan Pablo;
Schor, Ignacio E.;
Kornblihtt, Alberto R.

Publication type:

Article

RUNX2 controls human IPO8 basal transcription in Saos-2 cells.

Published in:

Molecular Medicine Reports, 2016, v. 14, n. 2, p. 1418, doi. 10.3892/mmr.2016.5356

By:

JIANJUN XIONG;
ZHIHONG HU;
TING WANG;
XIAOYUAN XU;
JIANYUN LIU;
PING WU;
XIANGXIN CHE;
WEIDONG LI

Publication type:

Article

p63 cooperates with CTCF to modulate chromatin architecture in skin keratinocytes.

Published in:

Epigenetics & Chromatin, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s13072-019-0280-y

By:

Qu, Jieqiong;
Yi, Guoqiang;
Zhou, Huiqing

Publication type:

Article

Combined analysis of dissimilar promoter accessibility and gene expression profiles identifies tissue-specific genes and actively repressed networks.

Published in:

Epigenetics & Chromatin, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s13072-019-0260-2

By:

Starks, Rebekah R.;
Biswas, Anilisa;
Jain, Ashish;
Tuteja, Geetu

Publication type:

Article

Coupling of PARP1-mediated chromatin structural changes to transcriptional RNA polymerase II elongation and cotranscriptional splicing.

Published in:

Epigenetics & Chromatin, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s13072-019-0261-1

By:

Matveeva, Elena A.;
Al-Tinawi, Qamar M. H.;
Rouchka, Eric C.;
Fondufe-Mittendorf, Yvonne N.

Publication type:

Article

Chromatin-mediated regulators of meiotic recombination revealed by proteomics of a recombination hotspot.

Published in:

Epigenetics & Chromatin, 2018, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13072-018-0233-x

By:

Storey, Aaron J.;
Wang, Hsin-Ping;
Protacio, Reine U.;
Davidson, Mari K.;
Tackett, Alan J.;
Wahls, Wayne P.

Publication type:

Article

Sporadic DUX4 expression in FSHD myocytes is associated with incomplete repression by the PRC2 complex and gain of H3K9 acetylation on the contracted D4Z4 allele.

Published in:

Epigenetics & Chromatin, 2018, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13072-018-0215-z

By:

Haynes, Premi;
Bomsztyk, Karol;
Miller, Daniel G.

Publication type:

Article

Initial high-resolution microscopic mapping of active and inactive regulatory sequences proves non-random 3D arrangements in chromatin domain clusters.

Published in:

Epigenetics & Chromatin, 2017, v. 10, p. 1, doi. 10.1186/s13072-017-0146-0

By:

Cremer, Marion;
Schmid, Volker J.;
Kraus, Felix;
Markaki, Yolanda;
Hellmann, Ines;
Maiser, Andreas;
Leonhardt, Heinrich;
John, Sam;
Stamatoyannopoulos, John;
Cremer, Thomas

Publication type:

Article

The detailed 3D multi-loop aggregate/rosette chromatin architecture and functional dynamic organization of the human and mouse genomes.

Published in:

Epigenetics & Chromatin, 2016, v. 9, p. 1, doi. 10.1186/s13072-016-0089-x

By:

Knoch, Tobias A.;
Wachsmuth, Malte;
Kepper, Nick;
Lesnussa, Michael;
Abuseiris, Anis;
Imam, A. M. Ali;
Kolovos, Petros;
Zuin, Jessica;
Kockx, Christel E. M.;
Brouwer, Rutger W. W.;
van de Werken, Harmen J. G.

Publication type:

Article

The high mobility group protein HMO1 functions as a linker histone in yeast.

Published in:

Epigenetics & Chromatin, 2016, v. 9, p. 1, doi. 10.1186/s13072-016-0062-8

By:

Panday, Arvind;
Grove, Anne

Publication type:

Article

Distinct epigenetic features of differentiation-regulated replication origins.

Published in:

Epigenetics & Chromatin, 2016, v. 9, p. 1, doi. 10.1186/s13072-016-0067-3

By:

Smith, Owen K.;
Kim, RyanGuk;
Haiqing Fu;
Martin, Melvenia M.;
Chii Mei Lin;
Utani, Koichi;
Ya Zhan;
Marks, Anna B.;
Lalande, Marc;
Chamberlain, Stormy;
Libbrecht, Maxwell W.;
Bouhassira, Eric E.;
Ryan, Michael C.;
Noble, William S.;
Aladjem, Mirit I.

Publication type:

Article

CBP binding outside of promoters and enhancers in Drosophila melanogaster.

Published in:

Epigenetics & Chromatin, 2015, v. 8, p. 1, doi. 10.1186/s13072-015-0042-4

By:

Philip, Philge;
Boija, Ann;
Vaid, Roshan;
Churcher, Allison M.;
Meyers, David J.;
Cole, Philip A.;
Mannervik, Mattias;
Stenberg, Per

Publication type:

Article

Development of novel cellular histone-binding and chromatin-displacement assays for bromodomain drug discovery.

Published in:

Epigenetics & Chromatin, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s13072-015-0026-4

By:

Zhan, Yanai;
Kost-Alimova, Maria;
Xi Shi;
Leo, Elisabetta;
Bardenhagen, Jennifer P.;
Shepard, Hannah E.;
Appikonda, Srikanth;
Vangamudi, Bhavatarini;
Shuping Zhao;
Tieu, Trang N.;
Shiming Jiang;
Heffernan, Timothy P.;
Marszalek, Joseph R.;
Toniatti, Carlo;
Draetta, Giulio;
Tyler, Jessica;
Barton, Michelle;
Jones, Philip;
Palmer, Wylie S.;
Geck Do, Mary K.

Publication type:

Article

Differential expression of histone H3 genes and selective association of the variant H3.7 with a specific sequence class in Stylonychia macronuclear development.

Published in:

Epigenetics & Chromatin, 2014, v. 7, n. 1, p. 2, doi. 10.1186/1756-8935-7-4

By:

Forcob, Sakeh;
Bulic, Aneta;
Jönsson, Franziska;
Lipps, Hans J.;
Postberg, Jan

Publication type:

Article

Systematic optimization of parameters involved in preparation of chromatin and chromatin immunoprecipitation (ChIP) workflow.

Published in:

2013

By:

Rosenfeld, John M.;
Cooke, Tracy;
Zirong Li;
Saito, Kan;
Taganov, Konstantin;
Thyagarajan, Bhaskar;
Solache, Alejandra

Publication type:

Conference Paper/Materials

Identifying candidate ncRNAs that direct changes in chromatin structure.

Published in:

2013

By:

Ray, Mridula K.;
Yanqun Wang;
Borowsky, Mark;
Sadreyev, Ruslan;
Kingston, Robert E.

Publication type:

Conference Paper/Materials

Spatial organization and nuclear positioning of murine immunoglobulin loci in developing B cells.

Published in:

2013

By:

Rother, Magdalena B.;
van Kester, Kevin A. M.;
van Dongen, Jacgues J. M.;
Murre, Cornells;
van Zelm, Menno C.

Publication type:

Conference Paper/Materials

Pioneer transcription factor FoxA is positioned on hypersensitive nucleosomes at active enhancers.

Published in:

2013

By:

Iwafuchi-Doi, Makiko;
Donahue, Greg;
Watts, Jason;
Cuesta, Isabel;
Zaret, Kenneth S.

Publication type:

Conference Paper/Materials

Genome-wide analysis of chromatin architecture in Oxytricha trifallax: a single-celled eukaryote with 16,000 tiny chromosomes.

Published in:

Epigenetics & Chromatin, 2013, v. 6, n. S1, p. 1, doi. 10.1186/1756-8935-6-S1-P4

By:

Beh, Leslie Y.;
Landweber, Laura F.

Publication type:

Article

Chromatin reassembly following RNA polymerase II transcription.

Published in:

2013

By:

Venkatesh, Swaminathan;
Smolle, Michaela;
Hua Li;
Gogol, Madelaine;
Ying Zhang;
Laurens, Florence;
Washburn, Michael P.;
Workman, Jerry L.

Publication type:

Conference Paper/Materials

HIRA-mediated H3.3 deposition is required for de novo paternal nuclear envelope formation in mouse zygotes.

Published in:

2013

By:

Inoue, Azusa;
Yi Zhang

Publication type:

Conference Paper/Materials

Identification of promoter targets of enhancers by epigenetic knockdown using TAL DNA binding proteins.

Published in:

2013

By:

Mendenhall, Eric M.;
Williamson, Kaylyn;
Reyon, Deepak;
Joung, J Keith;
Bernstein, Bradley E.

Publication type:

Conference Paper/Materials

The mechanism and consequences of chromatin assembly and disassembly.

Published in:

2013

By:

Tyler, Jessica

Publication type:

Conference Paper/Materials

Oxygen Regulates Human Pluripotent Stem Cell Metabolic Flux.

Published in:

Stem Cells International, 2019, p. 1, doi. 10.1155/2019/8195614

By:

Lees, Jarmon G.;
Cliff, Timothy S.;
Gammilonghi, Amanda;
Ryall, James G.;
Dalton, Stephen;
Gardner, David K.;
Harvey, Alexandra J.

Publication type:

Article

EZH2: an emerging role in melanoma biology and strategies for targeted therapy.

Published in:

Pigment Cell & Melanoma Research, 2015, v. 28, n. 1, p. 21, doi. 10.1111/pcmr.12280

By:

Tiffen, Jessamy;
Gallagher, Stuart J.;
Hersey, Peter

Publication type:

Article

β-Arrestin1 promotes the progression of chronic myeloid leukaemia by regulating BCR/ABL H4 acetylation.

Published in:

British Journal of Cancer, 2014, v. 111, n. 3, p. 568, doi. 10.1038/bjc.2014.335

By:

Qin, R;
Li, K;
Qi, X;
Zhou, X;
Wang, L;
Zhang, P;
Zou, L

Publication type:

Article

Ino80 is essential for proximal-distal axis asymmetry in part by regulating Bmp4 expression.

Published in:

BMC Biology, 2016, v. 14, p. 1, doi. 10.1186/s12915-016-0238-5

By:

Zhijun Qiu;
Elsayed, Zeinab;
Peterkin, Veronica;
Alkatib, Suehyb;
Bennett, Dorothy;
Landry, Joseph W.

Publication type:

Article

Quantifying the contribution of chromatin dynamics to stochastic gene expression reveals long, locus-dependent periods between transcriptional bursts.

Published in:

BMC Biology, 2013, v. 11, n. 1, p. 1, doi. 10.1186/1741-7007-11-15

By:

Viñuelas, José;
Kaneko, Gaël;
Coulon, Antoine;
Vallin, Elodie;
Morin, Valérie;
Mejia-Pous, Camila;
Kupiec, Jean-Jacques;
Beslon, Guillaume;
Gandrillon, Olivier

Publication type:

Article

Kaiso Gene Knockout Promotes Somatic Cell Reprogramming.

Published in:

Biochemistry (00062979), 2019, v. 84, n. 3, p. 283, doi. 10.1134/S0006297919030106

By:

Kaplun, D. S.;
Fok, R. E.;
Korostina, V. S.;
Prokhortchouk, E. B.;
Zhenilo, S. V.

Publication type:

Article

Straight core structure of DNA replication origins in the mammalian AMPD2 locus.

Published in:

Biochemistry (00062979), 2014, v. 79, n. 1, p. 37, doi. 10.1134/S0006297914010064

By:

Lima Neto, Q.;
Rando, F.;
Freitas, D.;
Rodrigues, L.;
Rosado, F.;
Fiorini, A.;
Gimenes, F.;
Tavares, J.;
Fernandez, M.

Publication type:

Article

Using a nano-flare probe to detect RNA in live donor cells prior to somatic cell nuclear transfer.

Published in:

Cell Biology International, 2016, v. 40, n. 1, p. 7, doi. 10.1002/cbin.10504

By:

Fu, Bo;
Ren, Liang;
Liu, Di;
Ma, Jian‐zhang;
An, Tie‐zhu;
Yang, Xiu‐qin;
Ma, Hong;
Guo, Zhen‐hua;
Zhu, Meng;
Bai, Jing

Publication type:

Article

Methylome modifications in monozygotic twins and in depression.

Published in:

European Psychiatry, 2016, v. 33, p. S30, doi. 10.1016/j.eurpsy.2016.01.854

By:

Fañanás, L.;
Córdova-Palomera, A.

Publication type:

Article

A computer lab exploring evolutionary aspects of chromatin structure and dynamics for an undergraduate chromatin course*.

Published in:

Biochemistry & Molecular Biology Education, 2013, v. 41, n. 2, p. 95, doi. 10.1002/bmb.20667

By:

Eirín‐López, José M.

Publication type:

Article

Hemi-methylated CpG sites connect Dnmt1-knockdown-induced and Tet1-induced DNA demethylation during somatic cell reprogramming.

Published in:

Cell Discovery, 2019, v. 5, n. 1, p. N.PAG, doi. 10.1038/s41421-018-0074-6

By:

He, Songwei;
Wang, Fuhui;
Zhang, Yixin;
Chen, Jinlong;
Liang, Lining;
Li, Yuan;
Zhang, Mengdan;
Yang, Xiao;
Pang, Hongshen;
Li, Yingying;
Huang, Xiaofen;
Qin, Dajiang;
Pei, Duanqing;
Sun, Hao;
Zheng, Hui

Publication type:

Article

DNA fragmentation in spermatozoa: a historical review.

Published in:

Andrology, 2017, v. 5, n. 4, p. 622, doi. 10.1111/andr.12381

By:

Rex, A. S.;
Aagaard, J.;
Fedder, J.

Publication type:

Article

Sperm DNA damage measured by sperm chromatin structure assay in men with a history of undescended testes.

Published in:

Andrology, 2017, v. 5, n. 4, p. 838, doi. 10.1111/andr.12384

By:

Brakel, J.;
Dinkelman‐Smit, M.;
Muinck Keizer‐Schrama, S. M. P. F.;
Hazebroek, F. W. J.;
Dohle, G. R.

Publication type:

Article

Transient scrotal hyperthermia affects human sperm DNA integrity, sperm apoptosis, and sperm protein expression.

Published in:

Andrology, 2016, v. 4, n. 6, p. 1054, doi. 10.1111/andr.12228

By:

Rao, M.;
Xia, W.;
Yang, J.;
Hu, L.‐X.;
Hu, S.‐F.;
Lei, H.;
Wu, Y.‐Q.;
Zhu, C.‐H.

Publication type:

Article

Fourier transform infrared spectroscopic analysis of sperm chromatin structure and DNA stability.

Published in:

Andrology, 2016, v. 4, n. 3, p. 430, doi. 10.1111/andr.12166

By:

Oldenhof, H.;
Schütze, S.;
Wolkers, W. F.;
Sieme, H.

Publication type:

Article