Works about MICROBIAL genomics

Results: 641

Dispersing misconceptions and identifying opportunities for the use of 'omics' in soil microbial ecology.

Published in:

Nature Reviews Microbiology, 2015, v. 13, n. 7, p. 439, doi. 10.1038/nrmicro3468

By:

Prosser, James I.

Publication type:

Article

Sequencing and beyond: integrating molecular 'omics' for microbial community profiling.

Published in:

Nature Reviews Microbiology, 2015, v. 13, n. 6, p. 360, doi. 10.1038/nrmicro3451

By:

Franzosa, Eric A.;
Hsu, Tiffany;
Sirota-Madi, Alexandra;
Shafquat, Afrah;
Abu-Ali, Galeb;
Morgan, Xochitl C.;
Huttenhower, Curtis

Publication type:

Article

Vying over spilt oil.

Published in:

Nature Reviews Microbiology, 2014, v. 12, n. 3, p. 156, doi. 10.1038/nrmicro3224

By:

Pham N., Tu Anh;
Anonye, Blessing O.

Publication type:

Article

Environmental microbiology: Exploring diversity with single-cell genomics.

Published in:

Nature Reviews Microbiology, 2013, v. 11, n. 9, p. 598, doi. 10.1038/nrmicro3095

By:

Hofer, Ursula

Publication type:

Article

Culture-free club.

Published in:

Nature Reviews Microbiology, 2013, v. 11, n. 7, p. 434, doi. 10.1038/nrmicro3052

By:

Bryant, Josephine M.

Publication type:

Article

Microbial interactions: from networks to models.

Published in:

Nature Reviews Microbiology, 2012, v. 10, n. 8, p. 538, doi. 10.1038/nrmicro2832

By:

Faust, Karoline;
Raes, Jeroen

Publication type:

Article

Marine microbiology: SAR86: streamlined for success.

Published in:

Nature Reviews Microbiology, 2012, v. 10, n. 2, p. 82, doi. 10.1038/nrmicro2736

By:

Molloy, Sheilagh

Publication type:

Article

Genome annotation: man versus machine.

Published in:

Nature Reviews Microbiology, 2010, v. 8, n. 11, p. 762, doi. 10.1038/nrmicro2462

By:

Petty, Nicola K.

Publication type:

Article

Taming the next-gen beast.

Published in:

Nature Reviews Microbiology, 2010, v. 8, n. 3, p. 161, doi. 10.1038/nrmicro2322

By:

Bentley, Stephen

Publication type:

Article

A Gene Responsible for Hybrid Incompatibility in Drosophila.

Published in:

PLoS Biology, 2004, v. 2, n. 6, p. 709, doi. 10.1371/journal.pbio.0020165

By:

DA, Barbash;
P, Awadalla;
AM, Tarone

Publication type:

Article

Challenges of metagenomics and single-cell genomics approaches for exploring cyanobacterial diversity.

Published in:

Photosynthesis Research, 2015, v. 126, n. 1, p. 135, doi. 10.1007/s11120-014-0066-9

By:

Davison, Michelle;
Hall, Eric;
Zare, Richard;
Bhaya, Devaki

Publication type:

Article

The metagenomics worldwide research.

Published in:

Current Genetics, 2017, v. 63, n. 5, p. 819, doi. 10.1007/s00294-017-0693-8

By:

Garrido-Cardenas, Jose;
Manzano-Agugliaro, Francisco

Publication type:

Article

The environment shapes microbial enzymes: five cold-active and salt-resistant carboxylesterases from marine metagenomes.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 5, p. 2165, doi. 10.1007/s00253-014-6038-3

By:

Tchigvintsev, Anatoli;
Tran, Hai;
Popovic, Ana;
Kovacic, Filip;
Brown, Greg;
Flick, Robert;
Hajighasemi, Mahbod;
Egorova, Olga;
Somody, Joseph;
Tchigvintsev, Dmitri;
Khusnutdinova, Anna;
Chernikova, Tatyana;
Golyshina, Olga;
Yakimov, Michail;
Savchenko, Alexei;
Golyshin, Peter;
Jaeger, Karl-Erich;
Yakunin, Alexander

Publication type:

Article

Bacterial chitinase with phytopathogen control capacity from suppressive soil revealed by functional metagenomics.

Published in:

Applied Microbiology & Biotechnology, 2014, v. 98, n. 6, p. 2819, doi. 10.1007/s00253-013-5287-x

By:

Hjort, Karin;
Presti, Ilaria;
Elväng, Annelie;
Marinelli, Flavia;
Sjöling, Sara

Publication type:

Article

Microbial genomics, transcriptomics and proteomics: new discoveries in decomposition research using complementary methods.

Published in:

Applied Microbiology & Biotechnology, 2014, v. 98, n. 4, p. 1531, doi. 10.1007/s00253-013-5457-x

By:

Baldrian, Petr;
López-Mondéjar, Rubén

Publication type:

Article

Biochemical analysis of a highly specific, pH stable xylanase gene identified from a bovine rumen-derived metagenomic library.

Published in:

Applied Microbiology & Biotechnology, 2013, v. 97, n. 6, p. 2423, doi. 10.1007/s00253-012-4088-y

By:

Gong, X.;
Gruniniger, R.;
Forster, R.;
Teather, R.;
McAllister, T.

Publication type:

Article

Efficient production of ( R)- o-chloromandelic acid by deracemization of o-chloromandelonitrile with a new nitrilase mined from Labrenzia aggregata.

Published in:

Applied Microbiology & Biotechnology, 2012, v. 95, n. 1, p. 91, doi. 10.1007/s00253-012-3993-4

By:

Zhang, Chen-Sheng;
Zhang, Zhi-Jun;
Li, Chun-Xiu;
Yu, Hui-Lei;
Zheng, Gao-Wei;
Xu, Jian-He

Publication type:

Article

Biodiscovery from rare actinomycetes: an eco-taxonomical perspective.

Published in:

Applied Microbiology & Biotechnology, 2012, v. 93, n. 5, p. 1843, doi. 10.1007/s00253-012-3898-2

By:

Kurtböke, D.

Publication type:

Article

Diversity and phylogeny of bacteria on Zimbabwe tobacco leaves estimated by 16S rRNA sequence analysis.

Published in:

Applied Microbiology & Biotechnology, 2011, v. 92, n. 5, p. 1033, doi. 10.1007/s00253-011-3367-3

By:

Su, Can;
Gu, Wen;
Zhe, Wei;
Zhang, Ke-Qin;
Duan, Yanqing;
Yang, Jinkui

Publication type:

Article

Mining Xanthomonas and Streptomyces genomes for new pectinase-encoding sequences and their heterologous expression in Escherichia coli.

Published in:

Applied Microbiology & Biotechnology, 2008, v. 78, n. 6, p. 973, doi. 10.1007/s00253-008-1389-2

By:

Zhizhuang Xiao;
Boyd, Jason;
Grosse, Stephan;
Beauchemin, Manon;
Coupe, Elizabeth;
Lau, Peter

Publication type:

Article

Overexpression, one-step purification, and biochemical characterization of a recombinant γ-glutamyltranspeptidase from Bacillus licheniformis.

Published in:

Applied Microbiology & Biotechnology, 2006, v. 73, n. 1, p. 103, doi. 10.1007/s00253-006-0440-4

By:

Lin, Long-Liu;
Chou, Pei-Ru;
Hua, Yu-Wen;
Hsu, Wen-Hwei

Publication type:

Article

The aureolic acid family of antitumor compounds: structure, mode of action, biosynthesis, and novel derivatives.

Published in:

Applied Microbiology & Biotechnology, 2006, v. 73, n. 1, p. 1, doi. 10.1007/s00253-006-0511-6

By:

Lombó, Felipe;
Menéndez, Nuria;
Salas, José A.;
Méndez, Carmen

Publication type:

Article

A direct and efficient PAGE-mediated overlap extension PCR method for gene multiple-site mutagenesis.

Published in:

Applied Microbiology & Biotechnology, 2006, v. 73, n. 1, p. 234, doi. 10.1007/s00253-006-0583-3

By:

Peng, Ri-He;
Xiong, Ai-Sheng;
Yao, Quan-Hong

Publication type:

Article

Large-scale identification of transcripts expressed in a symbiotic fungus ( Termitomyces) during plant biomass degradation.

Published in:

Applied Microbiology & Biotechnology, 2006, v. 73, n. 1, p. 195, doi. 10.1007/s00253-006-0570-8

By:

Johjima, Toru;
Taprab, Yaovapa;
Noparatnaraporn, Napavarn;
Kudo, Toshiaki;
Ohkuma, Moriya

Publication type:

Article

Early release of eggs and embryos in a brooding ancient asexual ostracod: brood selection or a gambling strategy to increase fecundity?

Published in:

Hydrobiologia, 2007, v. 585, n. 1, p. 249, doi. 10.1007/s10750-007-0641-6

By:

Pinto, Ricardo;
Rocha, Carlos;
Martens, Koen

Publication type:

Article

HORSE SPECIES SYMPOSIUM: Can the microbiome of the horse be altered to improve digestion?

Published in:

Journal of Animal Science, 2016, v. 94, n. 6, p. 2275, doi. 10.2527/jas.2015-0056

By:

Coverdale, J. A.

Publication type:

Article

HORSE SPECIES SYMPOSIUM: The microbiome of the horse hindgut: History and current knowledge.

Published in:

Journal of Animal Science, 2016, v. 94, n. 6, p. 2262, doi. 10.2527/jas.2015-0198

By:

Julliand, V.;
Grimm, P.

Publication type:

Article

HORSE SPECIES SYMPOSIUM: Canine intestinal microbiology and metagenomics: From phylogeny to function.

Published in:

Journal of Animal Science, 2016, v. 94, n. 6, p. 2247, doi. 10.2527/jas.2015-0029

By:

Guard, B. C.;
Suchodolski, J. S.

Publication type:

Article

Metagenomic analysis reveals microbial diversity and function in the rhizosphere soil of a constructed wetland.

Published in:

Environmental Technology, 2014, v. 35, n. 20, p. 2521, doi. 10.1080/09593330.2014.911361

By:

Bai, Yaohui;
Liang, Jinsong;
Liu, Ruiping;
Hu, Chengzhi;
Qu, Jiuhui

Publication type:

Article

MINIREVIEW Macroalgal Candidates for genomics.

Published in:

Journal of Phycology, 2004, v. 40, n. 1, p. 26, doi. 10.1111/j.0022-3646.2003.03-148.x

By:

Waaland, J. Robert;
Stiller, John W.;
Cheney, Donald P.

Publication type:

Article

Meeting report: GenBank microbial genomic taxonomy workshop (12-13 May, 2015).

Published in:

Standards in Genomic Sciences, 2016, v. 11, n. 1, p. 1, doi. 10.1186/s40793-016-0134-1

By:

Federhen, Scott;
Rossello-Mora, Ramon;
Klenk, Hans-Peter;
Tindall, Brian;
Konstantinidis, Konstantinos;
Whitman, William;
Brown, Daniel;
Labeda, David;
Ussery, David;
Garrity, George;
Colwell, Rita;
Hasan, Nur;
Graf, Joerg;
Parte, Aidan;
Yarza, Pablo;
Goldberg, Brittany;
Sichtig, Heike;
Karsch-Mizrachi, Ilene;
Clark, Karen;
McVeigh, Richard

Publication type:

Article

H3ABioNet computational metagenomics workshop in Mauritius: training to analyse microbial diversity for Africa.

Published in:

Standards in Genomic Sciences, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s40793-015-0111-0

By:

Baichoo, Shakuntala;
Botha, Gerrit;
Jaufeerally-Fakim, Yasmina;
Mungloo-Dilmohamud, Zahra;
Lundin, Daniel;
Mulder, Nicola;
Promponas, Vasilis;
Ouzounis, Christos

Publication type:

Article

High quality draft genome sequence of Corynebacterium ulceribovis type strain IMMIB-L1395<sup>T</sup> (DSM 45146<sup>T</sup>).

Published in:

Standards in Genomic Sciences, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s40793-015-0036-7

By:

Yassin, Atteyet F.;
Lapidus, Alla;
Han, James;
Reddy, T. B. K.;
Huntemann, Marcel;
Pati, Amrita;
Ivanova, Natalia;
Markowitz, Victor;
Woyke, Tanja;
Klenk, Hans-Peter;
Kyrpides, Nikos C.

Publication type:

Article

Genomic Encyclopedia of Type Strains, Phase I: The one thousand microbial genomes (KMG-I) project.

Published in:

Standards in Genomic Sciences, 2014, v. 9, n. 3, p. 1278, doi. 10.4056/sigs.5068949

By:

Kyrpides, Nikos;
Woyke, Tanja;
Eisen, Jonathan;
Garrity, George;
Lilburn, Timothy;
Beck, Brian;
Whitman, William;
Hugenholtz, Phil;
Klenk, Hans-Peter

Publication type:

Article

The GEN-ERA toolbox: unified and reproducible workflows for research in microbial genomics.

Published in:

GigaScience, 2023, v. 12, n. 1, p. 1, doi. 10.1093/gigascience/giad022

By:

Cornet, Luc;
Durieu, Benoit;
Baert, Frederik;
D'hooge, Elizabet;
Colignon, David;
Meunier, Loic;
Lupo, Valérian;
Cleenwerck, Ilse;
Daniel, Heide-Marie;
Rigouts, Leen;
Sirjacobs, Damien;
Declerck, Stéphane;
Vandamme, Peter;
Wilmotte, Annick;
Baurain, Denis;
Becker, Pierre

Publication type:

Article

Editorial: Genomics Research on Non-model Plant Pathogens: Delivering Novel Insights into Rust Fungus Biology.

Published in:

Frontiers in Plant Science, 2016, p. 1, doi. 10.3389/fpls.2016.00216

By:

Bakkeren, Guus;
Joly, David. L.;
Duplessis, Sébastien

Publication type:

Article

Recent advances in the Zymoseptoria tritici - wheat interaction: insights from pathogenomics.

Published in:

Frontiers in Plant Science, 2015, v. 6, p. 1, doi. 10.3389/fpls.2015.00102

By:

McDonald, Megan C.;
McDonald, Bruce A.;
Solomon, Peter S.

Publication type:

Article

Metagenomic search strategies for interactions among plants and multiple microbes.

Published in:

Frontiers in Plant Science, 2014, v. 5, p. 1, doi. 10.3389/fpls.2014.00268

By:

Melcher, Ulrich;
Verma, Ruchi;
Schneider, William L.

Publication type:

Article

A biologist, a statistician, and a bioinformatician walk into a conference room... and walk out with a great metagenomics project plan.

Published in:

Frontiers in Plant Science, 2014, v. 5, p. 1, doi. 10.3389/fpls.2014.00250

By:

Stapleton, Ann E.

Publication type:

Article

Plant virus metagenomics: what we know and why we need to know more.

Published in:

Frontiers in Plant Science, 2014, v. 5, p. 1, doi. 10.3389/fpls.2014.00150

By:

Stobbe, Anthony H.;
Roossinck, Marilyn J.

Publication type:

Article

An Introduction to the Analysis of Shotgun Metagenomic Data.

Published in:

Frontiers in Plant Science, 2014, v. 5, p. 1, doi. 10.3389/fpls.2014.00209

By:

Sharpton1, Thomas J.

Publication type:

Article

Comparative genomics and stx phage characterization of LEE-negative Shiga toxin-producing Escherichia coli.

Published in:

Frontiers in Cellular & Infection Microbiology, 2012, v. 2, p. 1, doi. 10.3389/fcimb.2012.00133

By:

Steyert, Susan R.;
Sahl, Jason W.;
Fraser-Liggett, Claire M.;
Teel, Louise D.;
Scheutz, Flemming;
Rasko, David A.

Publication type:

Article

The function of our microbiota: Who is out there and what do they do?

Published in:

Frontiers in Cellular & Infection Microbiology, 2012, v. 2, p. 1, doi. 10.3389/fcimb.2012.00104

By:

Ottman, Noora;
Smidt, Hauke;
De Vos, Willem M.;
Belzer, Clara

Publication type:

Article

Genomic stability of genotyping markers in Chlamydia trachomatis.

Published in:

2012

By:

Gomes, João Paulo

Publication type:

Opinion

Genotyping markers used for multi locus VNTR analysis with ompA (MLVA-ompA) and multi sequence typing (MST) retain stability in Chlamydia trachomatis.

Published in:

Frontiers in Cellular & Infection Microbiology, 2012, v. 2, p. 1, doi. 10.3389/fcimb.2012.00068

By:

Labiran, Clare;
Clarke, Ian N.;
Cutcliffe, Lesley T.;
Yibing Wang;
Skilton, Rachel J.;
Persson, Kenneth;
Bjartling, Carina;
Herrmann, Björn;
Christerson, Linus;
Marsh, Peter

Publication type:

Article

Dps promotes survival of nontypeable Haemophilus influenzae in biofilm communities in vitro and resistance to clearance in vivo.

Published in:

Frontiers in Cellular & Infection Microbiology, 2012, v. 2, p. 1, doi. 10.3389/fcimb.2012.00058

By:

Bing Pang;
Wenzhou Hong;
Kock, Nancy D.;
Swords, W. Edward

Publication type:

Article

A framework for assessing the concordance of molecular typing methods and the true strain phylogeny of Campylobacter jejuni and C. coli using draft genome sequence data.

Published in:

Frontiers in Cellular & Infection Microbiology, 2012, v. 2, p. 1, doi. 10.3389/fcimb.2012.00057

By:

Carrillo, Catherine D.;
Kruczkiewicz, Peter;
Mutschall, Steven;
Tudor, Andrei;
Clark, Clifford;
Taboada, Eduardo N.

Publication type:

Article

Genomic stability of genotyping markers in Chlamydia trachomatis.

Published in:

Frontiers in Cellular & Infection Microbiology, 2012, v. 2, p. 1, doi. 10.3389/fcimb.2012.00077

By:

Gomes, João Paulo

Publication type:

Article

Molecular detection and identification of Aspergillus spp. from clinical samples using real-time PCR.

Published in:

Mycoses, 2009, v. 52, n. 2, p. 129, doi. 10.1111/j.1439-0507.2008.01548.x

By:

Ramírez, Mercedes;
Castro, Carmen;
Palomares, José Carlos;
Torres, Ma. José;
Aller, Ana Isabel;
Ruiz, Maite;
Aznar, Javier;
Martín-Mazuelos, Estrella

Publication type:

Article

Microbial Culture Collection at the National Institute for Environmental Studies, Tsukuba, Japan.

Published in:

PICES Press, 2014, v. 22, n. 2, p. 43

By:

Masanobu Kawachi;
Noël, Mary-Hélène

Publication type:

Article