Works matching DE "MICROBIAL genomics"

Results: 639

Challenges of metagenomics and single-cell genomics approaches for exploring cyanobacterial diversity.

Published in:

Photosynthesis Research, 2015, v. 126, n. 1, p. 135, doi. 10.1007/s11120-014-0066-9

By:

Davison, Michelle;
Hall, Eric;
Zare, Richard;
Bhaya, Devaki

Publication type:

Article

Novel projected 4D triple resonance experiments for polypeptide backbone chemical shift assignment.

Published in:

Journal of Biomolecular NMR, 2002, v. 24, n. 1, p. 41, doi. 10.1023/A:1020605618150

By:

Xia, Youlin;
Arrowsmith, Cheryl H.;
Szyperski, Thomas

Publication type:

Article

Marker-assisted backcross selection in an interspecific Cucumis population broadens the genetic base of cucumber ( Cucumis sativus L.).

Published in:

Euphytica, 2011, v. 178, n. 2, p. 261, doi. 10.1007/s10681-010-0315-8

By:

Behera, Tusar K.;
Staub, Jack E.;
Behera, Snigdha;
Delannay, Isabelle Y.;
Jin Feng Chen

Publication type:

Article

Development of tomato SSR markers from anchored BAC clones of chromosome 12 and their application for genetic diversity analysis and linkage mapping.

Published in:

Euphytica, 2011, v. 178, n. 2, p. 283, doi. 10.1007/s10681-010-0331-8

By:

Geethanjali, Subramaniam;
Kadirvel, Palchamy;
de la Peña, Robert;
Rao, Eguru Sreenivasa;
Jaw-Fen Wang

Publication type:

Article

Heterologous production of secondary metabolites as pharmaceuticals in Saccharomyces cerevisiae.

Published in:

Biotechnology Letters, 2008, v. 30, n. 7, p. 1121, doi. 10.1007/s10529-008-9663-z

By:

Beibei Huang;
Jing Guo;
Bo Yi;
Xiaojing Yu;
Lianna Sun;
Wansheng Chen

Publication type:

Article

Composition and predicted functional ecology of mussel-associated bacteria in Indonesian marine lakes.

Published in:

Antonie van Leeuwenhoek, 2015, v. 107, n. 3, p. 821, doi. 10.1007/s10482-014-0375-1

By:

Cleary, Daniel;
Becking, Leontine;
Polónia, Ana;
Freitas, Rossana;
Gomes, Newton

Publication type:

Article

Comparative analysis of bacterial community-metagenomics in coastal Gulf of Mexico sediment microcosms following exposure to Macondo oil (MC252).

Published in:

Antonie van Leeuwenhoek, 2014, v. 106, n. 5, p. 993, doi. 10.1007/s10482-014-0268-3

By:

Koo, Hyunmin;
Mojib, Nazia;
Thacker, Robert;
Bej, Asim

Publication type:

Article

The newly-recognized species Staphylococcus massiliensis is likely to be part of the human skin microflora.

Published in:

Antonie van Leeuwenhoek, 2012, v. 101, n. 2, p. 449, doi. 10.1007/s10482-011-9635-5

By:

Zong, Zhiyong

Publication type:

Article

The Role of Microbial Genomics in Restoration Ecology: An Introduction.

Published in:

Microbial Ecology, 2023, v. 85, n. 3, p. 779, doi. 10.1007/s00248-023-02207-9

By:

Lemke, Michael;
DeSalle, Rob

Publication type:

Article

Metagenomic Signatures of Microbial Communities in Deep-Sea Hydrothermal Sediments of Azores Vent Fields.

Published in:

Microbial Ecology, 2018, v. 76, n. 2, p. 387, doi. 10.1007/s00248-018-1144-x

By:

Cerqueira, Teresa;
Barroso, Cristina;
Froufe, Hugo;
Egas, Conceição;
Bettencourt, Raul

Publication type:

Article

Metagenomic Analysis of Some Potential Nitrogen-Fixing Bacteria in Arable Soils at Different Formation Processes.

Published in:

Microbial Ecology, 2017, v. 73, n. 1, p. 162, doi. 10.1007/s00248-016-0837-2

By:

Wolińska, Agnieszka;
Kuźniar, Agnieszka;
Zielenkiewicz, Urszula;
Banach, Artur;
Izak, Dariusz;
Stępniewska, Zofia;
Błaszczyk, Mieczysław

Publication type:

Article

Microbial Genomics of a Host-Associated Commensal Bacterium in Fragmented Populations of Endangered Takahe.

Published in:

Microbial Ecology, 2016, v. 71, n. 4, p. 1020, doi. 10.1007/s00248-015-0721-5

By:

Grange, Zoë;
Gartrell, Brett;
Biggs, Patrick;
Nelson, Nicola;
Anderson, Marti;
French, Nigel

Publication type:

Article

A Beginner's Guide to Phylogenetics.

Published in:

Microbial Ecology, 2013, v. 66, n. 1, p. 1, doi. 10.1007/s00248-013-0236-x

By:

Sleator, Roy

Publication type:

Article

Microbial Environmental Genomics.

Published in:

Microbial Ecology, 2007, v. 53, n. 3, p. 367, doi. 10.1007/s00248-007-9214-5

By:

Nelson, Karen E.;
Methé, Barbara A.;
Kowalchuk, George A.

Publication type:

Article

Revamp a model—status and prospects of the Dictyostelium genome project.

Published in:

Current Genetics, 2003, v. 44, n. 2, p. 59, doi. 10.1007/s00294-003-0416-1

By:

Eichinger, Ludwig

Publication type:

Article

Using microbial genome annotation as a foundation for collaborative student research.

Published in:

Biochemistry & Molecular Biology Education, 2013, v. 41, n. 1, p. 34, doi. 10.1002/bmb.20663

By:

Reed, Kelynne E.;
Richardson, John M.

Publication type:

Article

Genetic goose chase.

Published in:

2016

By:

FOSSE, ROAR

Publication type:

Opinion

Exploring Genomics and Microbial Ecology: Analysis of Bidens pilosa L. Genetic Structure and Soil Microbiome Diversity by RAD-Seq and Metabarcoding.

Published in:

Plants (2223-7747), 2024, v. 13, n. 2, p. 221, doi. 10.3390/plants13020221

By:

Reyes-Ardila, Wendy Lorena;
Rugeles-Silva, Paula Andrea;
Duque-Zapata, Juan Diego;
Vélez-Martínez, Glever Alexander;
Tarazona Pulido, Lina;
Cardona Tobar, Karen Melissa;
Díaz Gallo, Sergio Alberto;
Muñoz Flórez, Jaime Eduardo;
Díaz-Ariza, Lucia Ana;
López-Alvarez, Diana

Publication type:

Article

Meeting report: GenBank microbial genomic taxonomy workshop (12-13 May, 2015).

Published in:

Standards in Genomic Sciences, 2016, v. 11, n. 1, p. 1, doi. 10.1186/s40793-016-0134-1

By:

Federhen, Scott;
Rossello-Mora, Ramon;
Klenk, Hans-Peter;
Tindall, Brian;
Konstantinidis, Konstantinos;
Whitman, William;
Brown, Daniel;
Labeda, David;
Ussery, David;
Garrity, George;
Colwell, Rita;
Hasan, Nur;
Graf, Joerg;
Parte, Aidan;
Yarza, Pablo;
Goldberg, Brittany;
Sichtig, Heike;
Karsch-Mizrachi, Ilene;
Clark, Karen;
McVeigh, Richard

Publication type:

Article

H3ABioNet computational metagenomics workshop in Mauritius: training to analyse microbial diversity for Africa.

Published in:

Standards in Genomic Sciences, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s40793-015-0111-0

By:

Baichoo, Shakuntala;
Botha, Gerrit;
Jaufeerally-Fakim, Yasmina;
Mungloo-Dilmohamud, Zahra;
Lundin, Daniel;
Mulder, Nicola;
Promponas, Vasilis;
Ouzounis, Christos

Publication type:

Article

High quality draft genome sequence of Corynebacterium ulceribovis type strain IMMIB-L1395<sup>T</sup> (DSM 45146<sup>T</sup>).

Published in:

Standards in Genomic Sciences, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s40793-015-0036-7

By:

Yassin, Atteyet F.;
Lapidus, Alla;
Han, James;
Reddy, T. B. K.;
Huntemann, Marcel;
Pati, Amrita;
Ivanova, Natalia;
Markowitz, Victor;
Woyke, Tanja;
Klenk, Hans-Peter;
Kyrpides, Nikos C.

Publication type:

Article

Genomic Encyclopedia of Type Strains, Phase I: The one thousand microbial genomes (KMG-I) project.

Published in:

Standards in Genomic Sciences, 2014, v. 9, n. 3, p. 1278, doi. 10.4056/sigs.5068949

By:

Kyrpides, Nikos;
Woyke, Tanja;
Eisen, Jonathan;
Garrity, George;
Lilburn, Timothy;
Beck, Brian;
Whitman, William;
Hugenholtz, Phil;
Klenk, Hans-Peter

Publication type:

Article

QitanTech Nanopore Long-Read Sequencing Enables Rapid Resolution of Complete Genomes of Multi-Drug Resistant Pathogens.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.778659

By:

Peng, Kai;
Yin, Yi;
Li, Yan;
Qin, Shangshang;
Liu, Yuan;
Yang, Xiaorong;
Wang, Zhiqiang;
Li, Ruichao

Publication type:

Article

Population Genomics of Microbial Biostalactites: Non-recombinogenic Genome Islands and Microdiversification by Transposons.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.828531

By:

Burkartová, Kateřina;
Dresler, Jiří;
Rídl, Jakub;
Falteisek, Lukáš

Publication type:

Article

Mycobacterium avium-triggered diseases: pathogenomics.

Published in:

Cellular Microbiology, 2012, v. 14, n. 6, p. 808, doi. 10.1111/j.1462-5822.2012.01776.x

By:

Ignatov, Dmitriy;
Kondratieva, Elena;
Azhikina, Tatyana;
Apt, Alexander

Publication type:

Article

Brazilian genomics breakthrough offers hope for leptospirosis control.

Published in:

Bulletin of the World Health Organization, 2004, v. 82, n. 6, p. 471

By:

Massarani, Luisa

Publication type:

Article

Trajectories of freshwater microbial genomics and greenhouse gas saturation upon glacial retreat.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-38806-w

By:

Wei, Jing;
Fontaine, Laurent;
Valiente, Nicolas;
Dörsch, Peter;
Hessen, Dag O.;
Eiler, Alexander

Publication type:

Article

Metagenomics.

Published in:

2014

By:

Allan, Elaine

Publication type:

Editorial

Utilization of Lymphoblastoid Cell Lines as a System for the Molecular Modeling of Autism.

Published in:

Journal of Autism & Developmental Disorders, 2006, v. 36, n. 8, p. 973, doi. 10.1007/s10803-006-0134-x

By:

Baron, Colin A.;
Liu, Stephenie Y.;
Hicks, Chindo;
Gregg, Jeffrey P.

Publication type:

Article

Community-Acquired MRSA.

Published in:

JAMA: Journal of the American Medical Association, 2008, v. 299, n. 8, p. 890, doi. 10.1001/jama.299.8.890-a

By:

Kuehn, Bridget M.

Publication type:

Article

Decoding Parasite Genomes.

Published in:

JAMA: Journal of the American Medical Association, 2005, v. 294, n. 7, p. 787, doi. 10.1001/jama.294.7.787-b

By:

Stephenson, Joan

Publication type:

Article

Fine Mapping of Disease Genes Using Tagging SNPs.

Published in:

Annals of Human Genetics, 2007, v. 71, n. 6, p. 815, doi. 10.1111/j.1469-1809.2007.00379.x

By:

Sjölander, Arvid;
Hössjer, Ola;
Hartman, Linda Werner;
Humphreys, Keith

Publication type:

Article

Parasitic and free-living leptospirae (Leptospiraceae): Ecological and genetic features.

Published in:

Biology Bulletin, 2010, v. 37, n. 7, p. 705, doi. 10.1134/S1062359010070058

By:

Ananyina, Yu.

Publication type:

Article

The human gut microbiome: are we our enterotypes?

Published in:

Microbial Biotechnology, 2011, v. 4, n. 5, p. 550, doi. 10.1111/j.1751-7915.2011.00290.x

By:

Siezen, Roland J.;
Kleerebezem, Michiel

Publication type:

Article

Marine microbial genomics in Europe: current status and perspectives.

Published in:

Microbial Biotechnology, 2010, v. 3, n. 5, p. 523, doi. 10.1111/j.1751-7915.2010.00169.x

By:

Glöckner, Frank Oliver;
Joint, Ian

Publication type:

Article

Marine genomics: at the interface of marine microbial ecology and biodiscovery.

Published in:

Microbial Biotechnology, 2010, v. 3, n. 5, p. 531, doi. 10.1111/j.1751-7915.2010.00193.x

By:

Heidelberg, Karla B.;
Gilbert, Jack A.;
Joint, Ian

Publication type:

Article

Mining for new enzymes.

Published in:

2009

By:

Aharoni, Amir

Publication type:

Other

Listening to microbial conversations.

Published in:

2009

By:

McInerney, Michael J.

Publication type:

Other

Mining the microbes – the human microbiome as model.

Published in:

2009

By:

de Vos, Willem M.

Publication type:

Other

The microbial reactome.

Published in:

2009

By:

Ferrer, Manuel

Publication type:

Other

Genomics of deep-sea and sub-seafloor microbes.

Published in:

Microbial Biotechnology, 2009, v. 2, n. 2, p. 157, doi. 10.1111/j.1751-7915.2009.00092.x

By:

Siezen, Roland J.;
Wilson, Greer

Publication type:

Article

Hepatitis B Virus Pregenomic RNA Is Present in Virions in Plasma and Is Associated With a Response to Pegylated Interferon Alfa-2a and Nucleos(t)ide Analogues.

Published in:

2016

By:

Jansen, L.;
Kootstra, Neeltje A.;
van Dort, Karel A.;
Takkenberg, R. Bart;
Reesink, Hendrik W.;
Zaaijer, Hans L.

Publication type:

journal article

Panakeia - a universal tool for bacterial pangenome analysis.

Published in:

BMC Genomics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12864-022-08303-3

By:

Beier, Sina;
Thomson, Nicholas R

Publication type:

Article

Improving microbial fitness in the mammalian gut by in vivo temporal functional metagenomics.

Published in:

Molecular Systems Biology, 2015, v. 11, n. 3, p. n/a, doi. 10.15252/msb.20145866

By:

Yaung, Stephanie J;
Deng, Luxue;
Li, Ning;
Braff, Jonathan L;
Church, George M;
Bry, Lynn;
Wang, Harris H;
Gerber, Georg K

Publication type:

Article

A system-level model for the microbial regulatory genome.

Published in:

Molecular Systems Biology, 2014, v. 10, n. 7, p. n/a, doi. 10.15252/msb.20145160

By:

Brooks, Aaron N;
Reiss, David J;
Allard, Antoine;
Wu, Wei‐Ju;
Salvanha, Diego M;
Plaisier, Christopher L;
Chandrasekaran, Sriram;
Pan, Min;
Kaur, Amardeep;
Baliga, Nitin S

Publication type:

Article

Host genetics and the rumen microbiome jointly associate with methane emissions in dairy cows.

Published in:

PLoS Genetics, 2018, v. 14, n. 10, p. 1, doi. 10.1371/journal.pgen.1007580

By:

Difford, Gareth Frank;
Plichta, Damian Rafal;
Løvendahl, Peter;
Lassen, Jan;
Noel, Samantha Joan;
Højberg, Ole;
Wright, André-Denis G.;
Zhu, Zhigang;
Kristensen, Lise;
Nielsen, Henrik Bjørn;
Guldbrandtsen, Bernt;
Sahana, Goutam

Publication type:

Article

Robustness encoded across essential and accessory replicons of the ecologically versatile bacterium Sinorhizobium meliloti.

Published in:

PLoS Genetics, 2018, v. 14, n. 3, p. 1, doi. 10.1371/journal.pgen.1007357

By:

diCenzo, George C.;
Benedict, Alex B.;
Fondi, Marco;
Walker, Graham C.;
Finan, Turlough M.;
Mengoni, Alessio;
Griffitts, Joel S.

Publication type:

Article

Correcting for batch effects in case-control microbiome studies.

Published in:

PLoS Computational Biology, 2018, v. 14, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006102

By:

Gibbons, Sean M.;
Duvallet, Claire;
Alm, Eric J.

Publication type:

Article

Dispersing misconceptions and identifying opportunities for the use of 'omics' in soil microbial ecology.

Published in:

Nature Reviews Microbiology, 2015, v. 13, n. 7, p. 439, doi. 10.1038/nrmicro3468

By:

Prosser, James I.

Publication type:

Article

Sequencing and beyond: integrating molecular 'omics' for microbial community profiling.

Published in:

Nature Reviews Microbiology, 2015, v. 13, n. 6, p. 360, doi. 10.1038/nrmicro3451

By:

Franzosa, Eric A.;
Hsu, Tiffany;
Sirota-Madi, Alexandra;
Shafquat, Afrah;
Abu-Ali, Galeb;
Morgan, Xochitl C.;
Huttenhower, Curtis

Publication type:

Article