Works about MICROBIAL genes

Results: 619

Habitat Heterogeneity of Nitrogen and Phosphorus Cycling Functional Genes in Rhizosphere Microorganisms of Pinus tabuliformis in Qinling Mountains, China.

Published in:

Microorganisms, 2025, v. 13, n. 6, p. 1275, doi. 10.3390/microorganisms13061275

By:

Yang, Hang;
Pang, Yue;
Yang, Ying;
Wang, Dexiang;
Wang, Yuchao

Publication type:

Article

Bacterial gene import and mesophilic adaptation in archaea.

Published in:

Nature Reviews Microbiology, 2015, v. 13, n. 7, p. 447, doi. 10.1038/nrmicro3485

By:

López-García, Purificación;
Zivanovic, Yvan;
Deschamps, Philippe;
Moreira, David

Publication type:

Article

The COMBREX Project: Design, Methodology, and Initial Results.

Published in:

PLoS Biology, 2013, v. 11, n. 8, p. 1, doi. 10.1371/journal.pbio.1001638

By:

Anton, Brian P.;
Chang, Yi-Chien;
Brown, Peter;
Choi, Han-Pil;
Faller, Lina L.;
Guleria, Jyotsna;
Hu, Zhenjun;
Klitgord, Niels;
Levy-Moonshine, Ami;
Maksad, Almaz;
Mazumdar, Varun;
McGettrick, Mark;
Osmani, Lais;
Pokrzywa, Revonda;
Rachlin, John;
Swaminathan, Rajeswari;
Allen, Benjamin;
Housman, Genevieve;
Monahan, Caitlin;
Rochussen, Krista

Publication type:

Article

Cooperation and the Fate of Microbial Societies.

Published in:

PLoS Biology, 2013, v. 11, n. 4, p. 1, doi. 10.1371/journal.pbio.1001549

By:

Allen, Benjamin;
Nowak, Martin A.

Publication type:

Article

Feedback between Population and Evolutionary Dynamics Determines the Fate of Social Microbial Populations.

Published in:

PLoS Biology, 2013, v. 11, n. 4, p. 1, doi. 10.1371/journal.pbio.1001547

By:

Sanchez, Alvaro;
Gore, Jeff

Publication type:

Article

The influence of Chinese tallow (Triadica sebifera) leaf litter on water quality and microbial community composition.

Published in:

Aquatic Ecology, 2021, v. 55, n. 1, p. 265, doi. 10.1007/s10452-020-09828-z

By:

Montez, Raymond D.;
Saenz, Daniel;
Martynova-Van Kley, Alexandra;
Van Kley, James;
Nalian, Armen;
Farrish, Kenneth

Publication type:

Article

Can mobile genetic elements rescue genes from extinction?

Published in:

Current Genetics, 2020, v. 66, n. 6, p. 1069, doi. 10.1007/s00294-020-01104-9

By:

van Dijk, Bram

Publication type:

Article

Overall functional gene diversity of microbial communities in three full-scale activated sludge bioreactors.

Published in:

Applied Microbiology & Biotechnology, 2014, v. 98, n. 16, p. 7233, doi. 10.1007/s00253-014-5791-7

By:

Xia, Yu;
Wang, Xiaohui;
Wen, Xianghua;
Ding, Kun;
Zhou, Jizhong;
Yang, Yunfeng;
Zhang, Yu

Publication type:

Article

Phytoremediation of triphenylmethane dyes by overexpressing a Citrobacter sp. triphenylmethane reductase in transgenic Arabidopsis.

Published in:

Applied Microbiology & Biotechnology, 2013, v. 97, n. 4, p. 1799, doi. 10.1007/s00253-012-4106-0

By:

Fu, Xiao-Yan;
Zhao, Wei;
Xiong, Ai-Sheng;
Tian, Yong-Sheng;
Zhu, Bo;
Peng, Ri-He;
Yao, Quan-Hong

Publication type:

Article

Culture-independent methods for studying environmental microorganisms: methods, application, and perspective.

Published in:

Applied Microbiology & Biotechnology, 2012, v. 93, n. 3, p. 993, doi. 10.1007/s00253-011-3800-7

By:

Su, Can;
Lei, Liping;
Duan, Yanqing;
Zhang, Ke-Qin;
Yang, Jinkui

Publication type:

Article

Structure and gene cluster of the O-antigen of Escherichia coli O165 containing 5-N-acetyl- 7-N-[(R)-3-hydroxybutanoyl]pseudaminic acid.

Published in:

Glycobiology, 2016, v. 26, n. 4, p. 335, doi. 10.1093/glycob/cwv106

By:

Senchenkova, Sof'ya N.;
Yuanyuan Zhang;
Perepelov, Andrei V.;
Xi Guo;
Shashkov, Alexander S.;
Weintraub, Andrej;
Bin Liu;
Widmalm, Göran;
Knirel, Yuriy A.

Publication type:

Article

Niche–dependent sponge hologenome expression profiles and the host-microbes interplay: a case of the hawaiian demosponge Mycale Grandis.

Published in:

Environmental Microbiome, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s40793-024-00563-8

By:

Liu, Fang;
Ryu, Taewoo;
Ravasi, Timothy;
Wang, Xin;
Wang, Guangyi;
Li, Zhiyong

Publication type:

Article

Tax4Fun2: prediction of habitat-specific functional profiles and functional redundancy based on 16S rRNA gene sequences.

Published in:

Environmental Microbiome, 2020, v. 15, n. 1, p. 1, doi. 10.1186/s40793-020-00358-7

By:

Wemheuer, Franziska;
Taylor, Jessica A.;
Daniel, Rolf;
Johnston, Emma;
Meinicke, Peter;
Thomas, Torsten;
Wemheuer, Bernd

Publication type:

Article

Accurate characterization of dynamic microbial gene expression and growth rate profiles.

Published in:

Synthetic Biology (23977000), 2022, v. 7, n. 1, p. 1, doi. 10.1093/synbio/ysac020

By:

Vidal, Gonzalo;
Vidal-Céspedes, Carlos;
Silva, Macarena Muñoz;
Castillo-Passi, Carlos;
Feliú, Guillermo Yáñez;
Federici, Fernán;
Rudge, Timothy J

Publication type:

Article

黄连解毒散和黄霉素对不同日龄肉鸡回肠菌群结构的影响.

Published in:

Journal of Henan Agricultural Sciences, 2020, v. 49, n. 2, p. 142, doi. 10.15933/j.cnki.1004-3268.2020.02.019

By:

袁林;
李万利;
杜晨红;
王志祥;
易宝弟;
王明发

Publication type:

Article

Comparison of Microbial Community Structures and Functional Characteristics in High-temperature Daqu Fermented from Wheat Ground to Different Degrees.

Published in:

Modern Food Science & Technology, 2024, v. 40, n. 7, p. 72, doi. 10.13982/j.mfst.1673-9078.2024.7.0912

By:

YANG Yang;
ZHANG Rui;
YU Hui;
LIU Wenhu;
ZHANG Liqiang;
RAN Maofang;
SHEN Caihong;
WANG Songtao

Publication type:

Article

The diversity and metabolic potential of the microbial functional gene associated with Porites pukoensis.

Published in:

Ecotoxicology, 2021, v. 30, n. 5, p. 986, doi. 10.1007/s10646-021-02419-0

By:

Zhang, Yanying;
Yang, Qingsong;
Zhang, Ying;
Ahmad, Manzoor;
Ling, Juan;
Dong, Junde;
Wang, Youshao

Publication type:

Article

Seasonality of the antibiotic resistance gene bla<sub>CTX-M</sub> in temperate Lake Maggiore.

Published in:

Hydrobiologia, 2019, v. 843, n. 1, p. 143, doi. 10.1007/s10750-019-04043-w

By:

Eckert, Ester M.;
Di Cesare, Andrea;
Malki, Lala-Sakina;
Villiger, Jörg;
Pernthaler, Jakob;
Callieri, Cristiana;
Bertoni, Roberto;
Corno, Gianluca

Publication type:

Article

69 The effects of feeding a novel saccharomyces cerevisiae feed additive on the prevalence and abundance of antimicrobial resistance genes in the microbiome(s) of receiving beef calves.

Published in:

Journal of Animal Science, 2019, v. 97, p. 40, doi. 10.1093/jas/skz122.072

By:

Sommer-Lassa, Morgan M;
Reecy, James;
Severin, Andrew;
Somwarpet-Seetharam, Arun;
Mayes, Mary Sue

Publication type:

Article

112 Beyond the gut: Systemic effects of the swine gut microbiome.

Published in:

2019

By:

Gomez, Andres

Publication type:

Abstract

The Presence of Gut Microbial Genes Encoding Bacterial Genotoxins or Pro-Inflammatory Factors in Stool Samples from Individuals with Colorectal Neoplasia.

Published in:

Diseases, 2019, v. 7, n. 1, p. 16, doi. 10.3390/diseases7010016

By:

Gómez-Moreno, Ramón;
González-Pons, María;
Soto-Salgado, Marievelisse;
Cruz-Correa, Marcia;
Baerga-Ortiz, Abel

Publication type:

Article

A potential zero water exchange system for recirculating aquarium using a DHS-USB system coupled with ozone.

Published in:

Environmental Technology, 2022, v. 43, n. 2, p. 275, doi. 10.1080/09593330.2020.1784295

By:

Adlin, Nur;
Hatamoto, Masashi;
Yamazaki, Shinichi;
Watari, Takahiro;
Yamaguchi, Takashi

Publication type:

Article

Improved microbial genomes and gene catalog of the chicken gut from metagenomic sequencing of high-fidelity long reads.

Published in:

GigaScience, 2022, v. 11, p. 1, doi. 10.1093/gigascience/giac116

By:

Zhang, Yan;
Jiang, Fan;
Yang, Boyuan;
Wang, Sen;
Wang, Hengchao;
Wang, Anqi;
Xu, Dong;
Fan, Wei

Publication type:

Article

A microbial gene catalog of anaerobic digestion from full-scale biogas plants.

Published in:

GigaScience, 2021, v. 10, n. 1, p. 1, doi. 10.1093/gigascience/giaa164

By:

Ma, Shichun;
Jiang, Fan;
Huang, Yan;
Zhang, Yan;
Wang, Sen;
Fan, Hui;
Liu, Bo;
Li, Qiang;
Yin, Lijuan;
Wang, Hengchao;
Liu, Hangwei;
Ren, Yuwei;
Li, Shuqu;
Cheng, Lei;
Fan, Wei;
Deng, Yu

Publication type:

Article

A catalog of microbial genes from the bovine rumen unveils a specialized and diverse biomass-degrading environment.

Published in:

GigaScience, 2020, v. 9, n. 6, p. 1, doi. 10.1093/gigascience/giaa057

By:

Li, Junhua;
Zhong, Huanzi;
Ramayo-Caldas, Yuliaxis;
Terrapon, Nicolas;
Lombard, Vincent;
Potocki-Veronese, Gabrielle;
Estellé, Jordi;
Popova, Milka;
Yang, Ziyi;
Zhang, Hui;
Li, Fang;
Tang, Shanmei;
Yang, Fangming;
Chen, Weineng;
Chen, Bing;
Li, Jiyang;
Guo, Jing;
Martin, Cécile;
Maguin, Emmanuelle;
Xu, Xun

Publication type:

Article

An integrated respiratory microbial gene catalogue to better understand the microbial aetiology of Mycoplasma pneumoniae pneumonia.

Published in:

GigaScience, 2019, v. 8, n. 8, p. N.PAG, doi. 10.1093/gigascience/giz093

By:

Dai, Wenkui;
Wang, Heping;
Zhou, Qian;
Li, Dongfang;
Feng, Xin;
Yang, Zhenyu;
Wang, Wenjian;
Qiu, Chuangzhao;
Lu, Zhiwei;
Xu, Ximing;
Lyu, Mengxuan;
Xie, Gan;
Li, Yinhu;
Bao, Yanmin;
Liu, Yanhong;
Shen, Kunling;
Yao, Kaihu;
Feng, Xikang;
Yang, Yonghong;
Zhou, Ke

Publication type:

Article

MGS-Fast: Metagenomic shotgun data fast annotation using microbial gene catalogs.

Published in:

GigaScience, 2019, v. 8, n. 4, p. N.PAG, doi. 10.1093/gigascience/giz020

By:

Brown, Stuart M;
Chen, Hao;
Hao, Yuhan;
Laungani, Bobby P;
Ali, Thahmina A;
Dong, Changsu;
Lijeron, Carlos;
Kim, Baekdoo;
Wultsch, Claudia;
Pei, Zhiheng;
Krampis, Konstantinos

Publication type:

Article

The unique composition of Indian gut microbiome, gene catalogue, and associated fecal metabolome deciphered using multi-omics approaches.

Published in:

GigaScience, 2019, v. 8, n. 3, p. N.PAG, doi. 10.1093/gigascience/giz004

By:

Dhakan, D B;
Maji, A;
Sharma, A K;
Saxena, R;
Pulikkan, J;
Grace, T;
Gomez, A;
Scaria, J;
Amato, K R;
Sharma, V K

Publication type:

Article

Microbial phosphorus‐cycling genes in soil under global change.

Published in:

Global Change Biology, 2024, v. 30, n. 4, p. 1, doi. 10.1111/gcb.17281

By:

Wang, Xuewei;
Guo, Hui;
Wang, Jianing;
He, Peng;
Kuzyakov, Yakov;
Ma, Miaojun;
Ling, Ning

Publication type:

Article

Community assembly of organisms regulates soil microbial functional potential through dual mechanisms.

Published in:

Global Change Biology, 2024, v. 30, n. 2, p. 1, doi. 10.1111/gcb.17160

By:

Zhu, Lingyue;
Luan, Lu;
Chen, Yan;
Wang, Xiaoyue;
Zhou, Shungui;
Zou, Wenxiu;
Han, Xiaori;
Duan, Yinghua;
Zhu, Bo;
Li, Yan;
Liu, Wenzhao;
Zhou, Jizhong;
Zhang, Jiabao;
Jiang, Yuji;
Sun, Bo

Publication type:

Article

Revisiting the relationships between soil nitrous oxide emissions and microbial functional gene abundances.

Published in:

Global Change Biology, 2023, v. 29, n. 17, p. 4697, doi. 10.1111/gcb.16876

By:

Zhang, Yong;
Chen, Ji;
Cheng, Xiaoli

Publication type:

Article

Moderate salinity improves the availability of soil P by regulating P‐cycling microbial communities in coastal wetlands.

Published in:

Global Change Biology, 2023, v. 29, n. 1, p. 276, doi. 10.1111/gcb.16465

By:

Hu, Minjie;
Le, Yixun;
Sardans, Jordi;
Yan, Ruibing;
Zhong, Yi;
Sun, Dongyao;
Tong, Chuan;
Peñuelas, Josep

Publication type:

Article

Remarkable effects of microbial factors on soil phosphorus bioavailability: A country-scale study.

Published in:

Global Change Biology, 2022, v. 28, n. 14, p. 4459, doi. 10.1111/gcb.16213

By:

Jing-li Lu;
Pu Jia;
Shi-wei Feng;
Yu-tao Wang;
Jin Zheng;
Shu-ning Ou;
Zhuo-hui Wu;
Bin Liao;
Wen-sheng Shu;
Jie-Liang Liang;
Jin-tian Li

Publication type:

Article

Large‐scale evidence for microbial response and associated carbon release after permafrost thaw.

Published in:

Global Change Biology, 2021, v. 27, n. 14, p. 3218, doi. 10.1111/gcb.15487

By:

Chen, Yongliang;
Liu, Futing;
Kang, Luyao;
Zhang, Dianye;
Kou, Dan;
Mao, Chao;
Qin, Shuqi;
Zhang, Qiwen;
Yang, Yuanhe

Publication type:

Article

Linking microbial functional gene abundance and soil extracellular enzyme activity: Implications for soil carbon dynamics.

Published in:

Global Change Biology, 2021, v. 27, n. 7, p. 1322, doi. 10.1111/gcb.15506

By:

Chen, Ji;
Sinsabaugh, Robert L.

Publication type:

Article

Altered microbial structure and function after thermokarst formation.

Published in:

Global Change Biology, 2021, v. 27, n. 4, p. 823, doi. 10.1111/gcb.15438

By:

Liu, Futing;
Kou, Dan;
Chen, Yongliang;
Xue, Kai;
Ernakovich, Jessica G.;
Chen, Leiyi;
Yang, Guibiao;
Yang, Yuanhe

Publication type:

Article

Human dissemination of genes and microorganisms in Earth's Critical Zone.

Published in:

Global Change Biology, 2018, v. 24, n. 4, p. 1488, doi. 10.1111/gcb.14003

By:

Zhu, Yong‐Guan;
Gillings, Michael;
Simonet, Pascal;
Stekel, Dov;
Banwart, Steven;
Penuelas, Josep

Publication type:

Article

Enhanced decomposition of stable soil organic carbon and microbial catabolic potentials by long-term field warming.

Published in:

Global Change Biology, 2017, v. 23, n. 11, p. 4765, doi. 10.1111/gcb.13755

By:

Feng, Wenting;
Liang, Junyi;
Hale, Lauren E.;
Jung, Chang Gyo;
Chen, Ji;
Zhou, Jizhong;
Xu, Minggang;
Yuan, Mengting;
Wu, Liyou;
Bracho, Rosvel;
Pegoraro, Elaine;
Schuur, Edward A. G.;
Luo, Yiqi

Publication type:

Article

Gene-Microbiome Co-expression Networks in Colon Cancer.

Published in:

Frontiers in Genetics, 2021, v. 11, p. N.PAG, doi. 10.3389/fgene.2021.617505

By:

Uriarte-Navarrete, Irving;
Hernández-Lemus, Enrique;
de Anda-Jáuregui, Guillermo

Publication type:

Article

Lamarckian evolution of the giant Mimivirus in allopatric laboratory culture on amoebae.

Published in:

Frontiers in Cellular & Infection Microbiology, 2012, v. 2, p. 1, doi. 10.3389/fcimb.2012.00091

By:

Colson, Philippe;
Raoult, Didier

Publication type:

Article

The function of our microbiota: Who is out there and what do they do?

Published in:

Frontiers in Cellular & Infection Microbiology, 2012, v. 2, p. 1, doi. 10.3389/fcimb.2012.00104

By:

Ottman, Noora;
Smidt, Hauke;
De Vos, Willem M.;
Belzer, Clara

Publication type:

Article

Experimental Therapeutic Solutions for Behcet's Disease.

Published in:

Journal of Experimental Pharmacology, 2021, v. 13, p. 127, doi. 10.2147/JEP.S265645

By:

Bozca, Burçin Cansu;
Alpsoy, Erkan

Publication type:

Article

Changes of functional microbial genes by quorum sensing inhibition during the operation of forward osmosis.

Published in:

Environmental Engineering Research, 2021, v. 26, n. 3, p. 1, doi. 10.4491/eer.2019.509

By:

Seung-Ju Choi;
Dong-Kyu Park;
Duksoo Jang;
Yeo-Myeong Yun;
Seoktae Kang

Publication type:

Article

Dietary fiber content in clinical ketogenic diets modifies the gut microbiome and seizure resistance in mice.

Published in:

Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-56091-7

By:

Özcan, Ezgi;
Yu, Kristie B.;
Dinh, Lyna;
Lum, Gregory R.;
Lau, Katie;
Hsu, Jessie;
Arino, Mariana;
Paramo, Jorge;
Lopez-Romero, Arlene;
Hsiao, Elaine Y.

Publication type:

Article

Early life microbial succession in the gut follows common patterns in humans across the globe.

Published in:

Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-56072-w

By:

Fahur Bottino, Guilherme;
Bonham, Kevin S.;
Patel, Fadheela;
McCann, Shelley;
Zieff, Michal;
Naspolini, Nathalia;
Ho, Daniel;
Portlock, Theo;
Joos, Raphaela;
Midani, Firas S.;
Schüroff, Paulo;
Das, Anubhav;
Shennon, Inoli;
Wilson, Brooke C.;
O'Sullivan, Justin M.;
Britton, Robert A.;
Murray, Deirdre M.;
Kiely, Mairead E.;
Taddei, Carla R.;
Beltrão-Braga, Patrícia C. B.

Publication type:

Article

Decoding the diagnostic and therapeutic potential of microbiota using pan-body pan-disease microbiomics.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-52598-7

By:

Schmartz, Georges P.;
Rehner, Jacqueline;
Gund, Madline P.;
Keller, Verena;
Molano, Leidy-Alejandra G.;
Rupf, Stefan;
Hannig, Matthias;
Berger, Tim;
Flockerzi, Elias;
Seitz, Berthold;
Fleser, Sara;
Schmitt-Grohé, Sabina;
Kalefack, Sandra;
Zemlin, Michael;
Kunz, Michael;
Götzinger, Felix;
Gevaerd, Caroline;
Vogt, Thomas;
Reichrath, Jörg;
Diehl, Lisa

Publication type:

Article

Strain dynamics of contaminating bacteria modulate the yield of ethanol biorefineries.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-49683-2

By:

de Oliveira Lino, Felipe Senne;
Garg, Shilpa;
Li, Simone S.;
Misiakou, Maria-Anna;
Kang, Kang;
Vale da Costa, Bruno Labate;
Beyer-Pedersen, Tobias Svend-Aage;
Giacon, Thamiris Guerra;
Basso, Thiago Olitta;
Panagiotou, Gianni;
Sommer, Morten Otto Alexander

Publication type:

Article

Strain dynamics of contaminating bacteria modulate the yield of ethanol biorefineries.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-49683-2

By:

de Oliveira Lino, Felipe Senne;
Garg, Shilpa;
Li, Simone S.;
Misiakou, Maria-Anna;
Kang, Kang;
Vale da Costa, Bruno Labate;
Beyer-Pedersen, Tobias Svend-Aage;
Giacon, Thamiris Guerra;
Basso, Thiago Olitta;
Panagiotou, Gianni;
Sommer, Morten Otto Alexander

Publication type:

Article

Advances and perspectives in computational prediction of microbial gene essentiality.

Published in:

Briefings in Functional Genomics, 2017, v. 16, n. 2, p. 70, doi. 10.1093/bfgp/elv063

By:

Mobegi, Fredrick M.;
Zomer, Aldert;
de Jonge, Marien I.;
van Hijum, Sacha A. F. T.

Publication type:

Article

BEYAZ PEYNİR MİKROBİYOTASINDA KÜLTÜROMİK VE SHOTGUN METAGENOMİK TEKNOLOJİLERİN DEĞERLENDİRİLMESİ.

Published in:

GIDA: The Journal of Food, 2021, v. 46, n. 3, p. 566, doi. 10.15237/gida.GD20136

By:

Cerit, Zeynep Görkem;
Baloğlu, Mehmet Cengiz;
Yılmaz, Remziye

Publication type:

Article