Works about METABOLIC flux analysis

Results: 555

Allicin enhances urea-N conversion to microbial-N by inhibiting urease activity and modulating the rumen microbiome in cattle.

Published in:

Microbiome, 2025, v. 13, n. 1, p. 1, doi. 10.1186/s40168-025-02111-z

By:

Zhang, Shiqi;
Zheng, Nan;
Zhao, Shengguo;
Wang, Jiaqi

Publication type:

Article

Evaluating the contribution of plant metabolic pathways in the light to the ATP:NADPH demand using a meta-analysis of isotopically non-stationary metabolic flux analyses.

Published in:

Photosynthesis Research, 2024, v. 161, n. 3, p. 177, doi. 10.1007/s11120-024-01106-5

By:

Smith, Kaila;
Strand, Deserah D.;
Walker, Berkley J.

Publication type:

Article

C flux analysis of cyanobacterial metabolism.

Published in:

Photosynthesis Research, 2015, v. 126, n. 1, p. 19, doi. 10.1007/s11120-014-0045-1

By:

Adebiyi, Adeola;
Jazmin, Lara;
Young, Jamey

Publication type:

Article

Metabolic flux analysis of Cyanothece sp. ATCC 51142 under mixotrophic conditions.

Published in:

Photosynthesis Research, 2013, v. 117, n. 1-3, p. 191, doi. 10.1007/s11120-013-9911-5

By:

Alagesan, Swathi;
Gaudana, Sandeep B.;
Sinha, Avinash;
Wangikar, Pramod P.

Publication type:

Article

The challenge and potential of photosynthesis: unique considerations for metabolic flux measurements in photosynthetic microorganisms.

Published in:

Biotechnology Letters, 2019, v. 41, n. 1, p. 35, doi. 10.1007/s10529-018-2622-4

By:

Sake, Cara L.;
Metcalf, Alexander J.;
Boyle, Nanette R.

Publication type:

Article

Measurement of the N/N ratio of phenylalanine in fermentation matrix by isotope ratio mass spectrometry.

Published in:

Biotechnology Letters, 2017, v. 39, n. 12, p. 1853, doi. 10.1007/s10529-017-2387-1

By:

Zhang, Shiwei;
Zhong, Qiding;
Wang, Daobing;
Huang, Zhanbin;
Li, Guohui

Publication type:

Article

Identification of novel knockout and up-regulated targets for improving isoprenoid production in E. coli.

Published in:

Biotechnology Letters, 2014, v. 36, n. 5, p. 1021, doi. 10.1007/s10529-014-1460-2

By:

Wang, Jian-feng;
Meng, Hai-lin;
Xiong, Zhi-qiang;
Zhang, Si-liang;
Wang, Yong

Publication type:

Article

Finding elementary flux modes in metabolic networks based on flux balance analysis and flux coupling analysis: application to the analysis of Escherichia coli metabolism.

Published in:

Biotechnology Letters, 2013, v. 35, n. 12, p. 2039, doi. 10.1007/s10529-013-1328-x

By:

Tabe-Bordbar, Shayan;
Marashi, Sayed-Amir

Publication type:

Article

Modulation of polyamine metabolic flux in adipose tissue alters the accumulation of body fat by affecting glucose homeostasis.

Published in:

Amino Acids, 2014, v. 46, n. 3, p. 701, doi. 10.1007/s00726-013-1548-3

By:

Liu, Chunli;
Perez-Leal, Oscar;
Barrero, Carlos;
Zahedi, Kamyar;
Soleimani, Manoocher;
Porter, Carl;
Merali, Salim

Publication type:

Article

Coproduction and enhancement of electricity and biobutanol using adsorption carrier solid-state fermentation.

Published in:

Biotechnology for Biofuels & Bioproducts, 2022, v. 15, n. 1, p. 1, doi. 10.1186/s13068-022-02138-6

By:

Feng, Xinyu;
Wang, Lan;
Chen, Hongzhang

Publication type:

Article

Identification and Combinatorial Overexpression of Key Genes for Enhancing ε-Poly-L-lysine Biosynthesis in Streptomyces albulus.

Published in:

Fermentation (Basel), 2024, v. 10, n. 1, p. 65, doi. 10.3390/fermentation10010065

By:

Zhang, Hongjian;
Yang, Hao;
Zhang, Chongyang;
Zhu, Daojun;
Wang, Liang;
Zhang, Jianhua;
Chen, Xusheng

Publication type:

Article

In Silico Design of Engineering Optimization via OptHandle for Effective Synthesis of Adipic Acid Precursor, α-Aminoadipate.

Published in:

Fermentation (Basel), 2023, v. 9, n. 9, p. 859, doi. 10.3390/fermentation9090859

By:

Zhang, Yang;
Cai, Bingqi;
Liu, Meng;
He, Keqin;
Gong, Zhijin;
Bi, Haoran;
Wang, Kai;
Chen, Biqiang;
Wang, Meng;
Su, Haijia;
Tan, Tianwei

Publication type:

Article

Untargeted Metabolomics Combined with Metabolic Flux Analysis Reveals the Mechanism of Sodium Citrate for High S-Adenosyl-Methionine Production by Pichia pastoris.

Published in:

Fermentation (Basel), 2022, v. 8, n. 12, p. 681, doi. 10.3390/fermentation8120681

By:

Xu, Wentao;
Xu, Feng;
Song, Weijing;
Dong, Le;
Qian, Jiangchao;
Huang, Mingzhi

Publication type:

Article

厌氧消化的胞内代谢通量与关键节点特征分析.

Published in:

Environmental Science & Technology (10036504), 2023, v. 46, n. 5, p. 16, doi. 10.19672/j.cnki.1003-6504.2375.22.338

By:

陈铁柱;
刘洪周;
王楠;
龙宪钢;
许坤德;
李建昌

Publication type:

Article

油酸对灵芝液态深层发酵合成羊毛甾醇代谢流分布的影响.

Published in:

Mycosystema, 2023, v. 46, n. 6, p. 1386, doi. 10.13346/j.mycosystema.220248

By:

冯杰;
刘艳芳;
颜梦秋;
唐传红;
周帅;
张劲松

Publication type:

Article

Optimized sampling protocol for mass spectrometry-based metabolomics in Streptomyces.

Published in:

Bioresources & Bioprocessing, 2019, v. 6, n. 1, p. N.PAG, doi. 10.1186/s40643-019-0269-1

By:

Liu, Xiaoyun;
Wang, Tong;
Sun, Xiaojuan;
Wang, Zejian;
Tian, Xiwei;
Zhuang, Yingping;
Chu, Ju

Publication type:

Article

Metabolic flux analysis of hydrogen production network by Ethanoligenens harbinense B49: effect of product inhibition.

Published in:

Environmental Technology, 2024, v. 45, n. 22, p. 4645, doi. 10.1080/09593330.2023.2283051

By:

Tang, Jing;
Li, Weitan;
Lin, Zhihong;
Yang, Jiahao;
Meng, Ziqi

Publication type:

Article

Context- dependent modification of PFKFB3 in hematopoietic stem cells promotes anaerobic glycolysis and ensures stress hematopoiesis.

Published in:

eLife, 2024, p. 1, doi. 10.7554/eLife.87674

By:

Shintaro Watanuki;
Hiroshi Kobayashi;
Yuki Sugiura;
Masamichi Yamamoto;
Daiki Karigane;
Kohei Shiroshita;
Yuriko Sorimach;
Shinya Fujita;
Takayuki Morikawa;
Shuhei Koide;
Motohiko Oshima;
Akira Nishiyama;
Koichi Murakami;
Miho Haraguchi;
Shinpei Tamaki;
Takehiro Yamamoto;
Tomohiro Yabushita;
Yosuke Tanaka;
Go Nagamatsu;
Hiroaki Honda

Publication type:

Article

Exploiting stoichiometric redundancies for computational efficiency and network reduction.

Published in:

In Silico Biology, 2012, v. 12, n. 1/2, p. 55, doi. 10.3233/ISB-140464

By:

Ingalls, Brian P.;
Bembenek, Eric

Publication type:

Article

Metabolic Engineering of Enterobacter aerogenes for Improved 2,3-Butanediol Production by Manipulating NADH Levels and Overexpressing the Small RNA RyhB.

Published in:

Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.754306

By:

Wu, Yan;
Chu, Wanying;
Yang, Jiayao;
Xu, Yudong;
Shen, Qi;
Yang, Haoning;
Xu, Fangxu;
Liu, Yefei;
Lu, Ping;
Jiang, Ke;
Zhao, Hongxin

Publication type:

Article

Editorial: Technological Advances Improving Recombinant Protein Production in Bacteria.

Published in:

2021

By:

Ow, Dave Siak-Wei;
Oh, Min-Kyu;
Chiang, Chung-Jen;
Chao, Yun-Peng

Publication type:

Editorial

Metabolic engineering of E. coli for the production of O-succinyl-L-homoserine with high yield.

Published in:

3 Biotech, 2018, v. 8, n. 7, p. 1, doi. 10.1007/s13205-018-1332-x

By:

Huang, Jian-Feng;
Zhang, Bo;
Shen, Zhen-Yang;
Liu, Zhi-Qiang;
Zheng, Yu-Guo

Publication type:

Article

Ehrungen.

Published in:: Nachrichten aus der Chemie, 2018, v. 66, n. 2, p. 168, doi. 10.1002/nadc.20184070644
Publication type:: Article

Efficient co-production of S-adenosylmethionine and glutathione by Candida utilis: effect of dissolved oxygen on enzyme activity and energy supply.

Published in:

Journal of Chemical Technology & Biotechnology, 2017, v. 92, n. 8, p. 2150, doi. 10.1002/jctb.5226

By:

Li, Dechao;
Wang, Dahui;
Wei, Gongyuan

Publication type:

Article

Butyric acid production from recycled waste paper by immobilized Clostridium tyrobutyricum in a fibrous-bed bioreactor.

Published in:

Journal of Chemical Technology & Biotechnology, 2016, v. 91, n. 4, p. 1048, doi. 10.1002/jctb.4680

By:

Huang, Jin;
Dai, Hongliang;
Yan, Ren;
Wang, Pu

Publication type:

Article

Intracellular metabolic flux analysis of CHO cells supplemented with wheat hydrolysates for improved mAb production and cell-growth.

Published in:

Journal of Chemical Technology & Biotechnology, 2015, v. 90, n. 2, p. 291, doi. 10.1002/jctb.4523

By:

Lee, Hae Woo;
Christie, Andrew;
Starkey, Jason A.;
Read, Erik K.;
Yoon, Seongkyu

Publication type:

Article

Suppression of angiopoietin-like 4 reprograms endothelial cell metabolism and inhibits angiogenesis.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-43900-0

By:

Chaube, Balkrishna;
Citrin, Kathryn M.;
Sahraei, Mahnaz;
Singh, Abhishek K.;
de Urturi, Diego Saenz;
Ding, Wen;
Pierce, Richard W.;
Raaisa, Raaisa;
Cardone, Rebecca;
Kibbey, Richard;
Fernández-Hernando, Carlos;
Suárez, Yajaira

Publication type:

Article

Characterizing cancer metabolism from bulk and single-cell RNA-seq data using METAFlux.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-40457-w

By:

Huang, Yuefan;
Mohanty, Vakul;
Dede, Merve;
Tsai, Kyle;
Daher, May;
Li, Li;
Rezvani, Katayoun;
Chen, Ken

Publication type:

Article

The negative effect of G1958A polymorphism on MTHFD1 protein stability and HCC growth.

Published in:

Cellular Oncology (2211-3428), 2023, v. 46, n. 3, p. 735, doi. 10.1007/s13402-023-00780-2

By:

Rao, Keqiang;
Zheng, Ke;
Zhao, Qin;
He, Jing;
Zhou, Bei;
Hou, Guofang;
Sha, Nannan;
Wang, Wang;
Yan, Man;
Zhou, Yue;
Jin, Yuting;
Jiang, Yuhui;
Xia, Qiang

Publication type:

Article

Characterisation of extraembryonic endoderm-like cells from mouse embryonic fibroblasts induced using chemicals alone.

Published in:

Stem Cell Research & Therapy, 2020, v. 11, n. 1, p. 1, doi. 10.1186/s13287-020-01664-0

By:

He, Xia;
Chi, Guangfan;
Li, Meiying;
Xu, Jinying;
Zhang, Lihong;
Song, Yaolin;
Wang, Lina;
Li, Yulin

Publication type:

Article

AMPK-HIF-1α signaling enhances glucose-derived de novo serine biosynthesis to promote glioblastoma growth.

Published in:

Journal of Experimental & Clinical Cancer Research (17569966), 2023, v. 42, n. 1, p. 1, doi. 10.1186/s13046-023-02927-3

By:

Yun, Hye Jin;
Li, Min;
Guo, Dong;
Jeon, So Mi;
Park, Su Hwan;
Lim, Je Sun;
Lee, Su Bin;
Liu, Rui;
Du, Linyong;
Kim, Seok-Ho;
Shin, Tae Hwan;
Eyun, Seong-il;
Park, Yun-Yong;
Lu, Zhimin;
Lee, Jong-Ho

Publication type:

Article

Parallel isotope differential modeling for instationary 13C fluxomics at the genome scale.

Published in:

Biotechnology for Biofuels, 2020, v. 13, n. 1, p. 1, doi. 10.1186/s13068-020-01737-5

By:

Zhang, Zhengdong;
Liu, Zhentao;
Meng, Yafei;
Chen, Zhen;
Han, Jiayu;
Wei, Yimin;
Shen, Tie;
Yi, Yin;
Xie, Xiaoyao

Publication type:

Article

Small Current but Highly Productive Synthesis of 1,3‐Propanediol from Glycerol by an Electrode‐Driven Metabolic Shift in Klebsiella pneumoniae L17.

Published in:

ChemSusChem, 2020, v. 13, n. 3, p. 564, doi. 10.1002/cssc.201902928

By:

Kim, Changman;
Lee, Jae Hyeon;
Baek, Jiyun;
Kong, Da Seul;
Na, Jeong‐Geol;
Lee, Jinwon;
Sundstrom, Eric;
Park, Sunghoon;
Kim, Jung Rae

Publication type:

Article

Glucose metabolic flux distribution of Lactobacillus amylophilus during lactic acid production using kitchen waste saccharified solution.

Published in:

Microbial Biotechnology, 2013, v. 6, n. 6, p. 685, doi. 10.1111/1751-7915.12046

By:

Liu, Jianguo;
Wang, Qunhui;
Zou, Hui;
Liu, Yingying;
Wang, Juan;
Gan, Kemin;
Xiang, Juan

Publication type:

Article

Metabolic engineering to enhance bacterial hydrogen production.

Published in:

Microbial Biotechnology, 2008, v. 1, n. 1, p. 30, doi. 10.1111/j.1751-7915.2007.00003.x

By:

Maeda, Toshinari;
Sanchez-Torres, Viviana;
Wood, Thomas K.

Publication type:

Article

Multifunctional Roles of NAD and NADH in Astrocytes.

Published in:

Neurochemical Research, 2012, v. 37, n. 11, p. 2317, doi. 10.1007/s11064-012-0760-y

By:

Wilhelm, Franziska;
Hirrlinger, Johannes

Publication type:

Article

Integrated analysis of gene expression and metabolic fluxes in PHA-producing Pseudomonas putida grown on glycerol.

Published in:

Microbial Cell Factories, 2016, v. 15, p. 1, doi. 10.1186/s12934-016-0470-2

By:

Beckers, Veronique;
Poblete-Castro, Ignacio;
Tomasch, Jürgen;
Wittmann, Christoph

Publication type:

Article

Systems analysis of methylerythritol-phosphate pathway flux in E. coli: insights into the role of oxidative stress and the validity of lycopene as an isoprenoid reporter metabolite.

Published in:

Microbial Cell Factories, 2015, v. 14, p. 1, doi. 10.1186/s12934-015-0381-7

By:

Bongers, Mareike;
Chrysanthopoulos, Panagiotis K.;
Behrendorff, James B. Y. H.;
Hodson, Mark P.;
Vickers, Claudia E.;
Nielsen, Lars K.

Publication type:

Article

Integrated isotope-assisted metabolomics and 13C metabolic flux analysis reveals metabolic flux redistribution for high glucoamylase production by Aspergillus niger.

Published in:

Microbial Cell Factories, 2015, v. 14, n. 1, p. 1, doi. 10.1186/s12934-015-0329-y

By:

Hongzhong Lu;
Xiaoyun Liu;
Mingzhi Huang;
Jianye Xia;
Ju Chu;
Yingping Zhuang;
Siliang Zhang;
Henk Noorman

Publication type:

Article

Metabolic network capacity of Escherichia coli for Krebs cycle-dependent proline hydroxylation.

Published in:

Microbial Cell Factories, 2015, v. 14, n. 1, p. 1, doi. 10.1186/s12934-015-0298-1

By:

Theodosiou, Eleni;
Frick, Oliver;
Bühler, Bruno;
Schmid, Andreas

Publication type:

Article

Production of medium chain length polyhydroxyalkanoate in metabolic flux optimized Pseudomonas putida.

Published in:

Microbial Cell Factories, 2014, v. 13, n. 1, p. 1, doi. 10.1186/1475-2859-13-88

By:

Borrero-de Acuña, José Manuel;
Bielecka, Agata;
Häussler, Susanne;
Schobert, Max;
Jahn, Martina;
Wittmann, Christoph;
Jahn, Dieter;
Poblete-Castro, Ignacio

Publication type:

Article

Flux analysis of the Lactobacillus reuteri propanediol-utilization pathway for production of 3- hydroxypropionaldehyde, 3-hydroxypropionic acid and 1,3-propanediol from glycerol.

Published in:

Microbial Cell Factories, 2014, v. 13, n. 1, p. 1, doi. 10.1186/1475-2859-13-76

By:

Dishisha, Tarek;
Pereyra, Luciana P.;
Sang-Hyun Pyo;
Britton, Robert A.;
Hatti-Kaul, Rajni

Publication type:

Article

Investigating xylose metabolism in recombinant Saccharomyces cerevisiae via 13C metabolic flux analysis.

Published in:

Microbial Cell Factories, 2013, v. 12, n. 1, p. 1, doi. 10.1186/1475-2859-12-114

By:

Xueyang Feng;
Huimin Zhao

Publication type:

Article

Continuous and batch cultures of Escherichia coli KJ134 for succinic acid fermentation: metabolic flux distributions and production characteristics.

Published in:

Microbial Cell Factories, 2013, v. 12, n. 1, p. 1, doi. 10.1186/1475-2859-12-80

By:

Van Heerden, Carel D.;
Nicol, Willie

Publication type:

Article

Towards better understanding of an industrial cell factory: investigating the feasibility of real-time metabolic flux analysis in Pichia pastoris.

Published in:

Microbial Cell Factories, 2013, v. 12, n. 1, p. 1, doi. 10.1186/1475-2859-12-51

By:

Fazenda, Mariana L.;
Dias, Joao M. L.;
Harvey, Linda M.;
Nordon, Alison;
Edrada-Ebel, Ruan;
LittleJohn, David;
McNeil, Brian

Publication type:

Article

A quantitative study of methanol/sorbitol co-feeding process of a Pichia pastoris Mut+/pAOX1-lacZ strain.

Published in:

Microbial Cell Factories, 2013, v. 12, n. 1, p. 1, doi. 10.1186/1475-2859-12-33

By:

Hongxing Niu;
Jost, Laurent;
Pirlot, Nathalie;
Sassi, Hosni;
Daukandt, Marc;
Rodriguez, Christian;
Fickers, Patrick

Publication type:

Article

Genome-scale reconstruction and in silico analysis of Klebsiella oxytoca for 2,3-butanediol production.

Published in:

Microbial Cell Factories, 2013, v. 12, n. 1, p. 1, doi. 10.1186/1475-2859-12-20

By:

Jong Myoung Park;
Hyohak Song;
Hee Jong Lee;
Doyoung Seung

Publication type:

Article

Improved production of secreted heterologous enzyme in Bacillus subtilis strain MGB874 via modification of glutamate metabolism and growth conditions.

Published in:

Microbial Cell Factories, 2013, v. 12, n. 1, p. 1, doi. 10.1186/1475-2859-12-18

By:

Manabe, Kenji;
Kageyama, Yasushi;
Morimoto, Takuya;
Shimizu, Eri;
Takahashi, Hiroki;
Kanaya, Shigehiko;
Ara, Katsutoshi;
Ozaki, Katsuya;
Ogasawara, Naotake

Publication type:

Article

Metabolic fluxes for nutritional flexibility of Mycobacterium tuberculosis.

Published in:

Molecular Systems Biology, 2021, v. 17, n. 5, p. 1, doi. 10.15252/msb.202110280

By:

Borah, Khushboo;
Mendum, Tom A.;
Hawkins, Nathaniel D.;
Ward, Jane L.;
Beale, Michael H.;
Larrouy-Maumus, Gerald;
Bhatt, Apoorva;
Moulin, Martine;
Haertlein, Michael;
Strohmeier, Gernot;
Pichler, Harald;
Forsyth, V. Trevor;
Noack, Stephan;
Goulding, Celia W.;
McFadden, Johnjoe;
Beste, Dany J. V.

Publication type:

Article

Bacterial persistence is an active σS stress response to metabolic flux limitation.

Published in:

Molecular Systems Biology, 2016, v. 12, n. 9, p. n/a, doi. 10.15252/msb.20166998

By:

Radzikowski, Jakub Leszek;
Vedelaar, Silke;
Siegel, David;
Ortega, Álvaro Dario;
Schmidt, Alexander;
Heinemann, Matthias

Publication type:

Article