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Automated multiconformer model building for X-ray crystallography and cryo-EM.
- Published in:
- eLife, 2024, p. 1, doi. 10.7554/eLife.90606
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- Article
Mechanochemical Approaches to Fundamental Studies in Soft‐Matter Physics.
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- Angewandte Chemie, 2024, v. 136, n. 19, p. 1, doi. 10.1002/ange.202402442
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OneFlowTraX: a user-friendly software for super-resolution analysis of single-molecule dynamics and nanoscale organization.
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- Frontiers in Plant Science, 2024, p. 1, doi. 10.3389/fpls.2024.1358935
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Biomolecular condensates form spatially inhomogeneous network fluids.
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- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-47602-z
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Spatially resolved mapping of proteome turnover dynamics with subcellular precision.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-42861-8
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Spatially resolved mapping of proteome turnover dynamics with subcellular precision.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-42861-8
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Assessing the dynamics and macromolecular interactions of the intrinsically disordered protein YY1.
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- Bioscience Reports, 2023, v. 43, n. 10, p. 1, doi. 10.1042/BSR20231295
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ACCELERATED TESTING OF MECHANICAL AND CHEMICAL EFFECT OF THE ENVIRONMENT ON WEAR RESISTANCE OF PARTS OF TRIBOCOUPLES UNDER COMPLEX DYNAMIC LOADING.
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- Eurasian Physical Technical Journal, 2023, v. 20, n. 4, p. 61, doi. 10.31489/2023No4/61-66
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Scipion-EM-ProDy: A Graphical Interface for the ProDy Python Package within the Scipion Workflow Engine Enabling Integration of Databases, Simulations and Cryo-Electron Microscopy Image Processing.
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- International Journal of Molecular Sciences, 2023, v. 24, n. 18, p. 14245, doi. 10.3390/ijms241814245
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Pathfinder: Protein folding pathway prediction based on conformational sampling.
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- PLoS Computational Biology, 2023, v. 19, n. 9, p. 1, doi. 10.1371/journal.pcbi.1011438
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Interaction of Macromolecular Chain with Phospholipid Membranes in Solutions: A Dissipative Particle Dynamics Simulation Study.
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- Molecules, 2023, v. 28, n. 15, p. 5790, doi. 10.3390/molecules28155790
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Self-assembly of shell protein and native enzyme in a crowded environment leads to catalytically active phase condensates.
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- Biochemical Journal, 2023, v. 480, n. 8, p. 539, doi. 10.1042/BCJ20220551
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Real-time single-molecule 3D tracking in E. coli based on cross-entropy minimization.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-36879-1
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Fast and automated protein-DNA/RNA macromolecular complex modeling from cryo-EM maps.
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- Briefings in Bioinformatics, 2023, v. 24, n. 2, p. 1, doi. 10.1093/bib/bbac632
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- Article
Macromolecular Crowding Is Surprisingly Unable to Deform the Structure of a Model Biomolecular Condensate.
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- Biology (2079-7737), 2023, v. 12, n. 2, p. 181, doi. 10.3390/biology12020181
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- Article
Stimuli‐Responsive Macromolecular Architecture by Butler Cyclopolymerizations: Synthesis and Applications.
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- Chemical Record, 2023, v. 23, n. 2, p. 1, doi. 10.1002/tcr.202200235
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Pre-Molten, Wet, and Dry Molten Globules en Route to the Functional State of Proteins.
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- International Journal of Molecular Sciences, 2023, v. 24, n. 3, p. 2424, doi. 10.3390/ijms24032424
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Preparation and In Vitro Evaluation of a Gadolinium-Containing Vitamin E TPGS Micelle as a Potential Contrast Agent for MR Imaging.
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- Pharmaceutics, 2023, v. 15, n. 2, p. 401, doi. 10.3390/pharmaceutics15020401
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The Graham and Karnovsky Horseradish Peroxidase Ultrastructural Method: A Premier JHC Citation Classic.
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- Journal of Histochemistry & Cytochemistry, 2023, v. 71, n. 1, p. 43, doi. 10.1369/00221554221146838
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Hierarchical Coarse-Grained Strategy for Macromolecular Self-Assembly: Application to Hepatitis B Virus-Like Particles.
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- International Journal of Molecular Sciences, 2022, v. 23, n. 23, p. 14699, doi. 10.3390/ijms232314699
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Granal thylakoid structure and function: explaining an enduring mystery of higher plants.
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- New Phytologist, 2022, v. 236, n. 2, p. 319, doi. 10.1111/nph.18371
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Valorization of Polyethylene Terephthalate to Muconic Acid by Engineering Pseudomonas Putida.
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- International Journal of Molecular Sciences, 2022, v. 23, n. 19, p. 10997, doi. 10.3390/ijms231910997
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Triple ionization and fragmentation of benzene trimers following ultrafast intermolecular Coulombic decay.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-33032-2
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- Article
Optical-Tweezers-integrating-Differential-Dynamic-Microscopy maps the spatiotemporal propagation of nonlinear strains in polymer blends and composites.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-32876-y
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- Article
First Insights into the Antiviral Activity of Chitosan-Based Bioactive Polymers towards the Bacteriophage Phi6: Physicochemical Characterization, Inactivation Potential, and Inhibitory Mechanisms.
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- Polymers (20734360), 2022, v. 14, n. 16, p. 3357, doi. 10.3390/polym14163357
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Choreographing atomic motions of macromolecular machines in action: Towards dynamics‐based drug discovery.
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- Clinical & Translational Medicine, 2022, v. 12, n. 8, p. 1, doi. 10.1002/ctm2.977
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- Article
Maleated rosin-derived advanced materials: preparation, properties and application.
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- Journal of the Iranian Chemical Society, 2022, v. 19, n. 8, p. 3229, doi. 10.1007/s13738-022-02542-7
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Bacterial macromolecular machineries.
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- Molecular Microbiology, 2022, v. 118, n. 1/2, p. 1, doi. 10.1111/mmi.14957
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- Article
Self-Assembled Nanoscale Materials for Neuronal Regeneration: A Focus on BDNF Protein and Nucleic Acid Biotherapeutic Delivery.
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- Nanomaterials (2079-4991), 2022, v. 12, n. 13, p. 2267, doi. 10.3390/nano12132267
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RCSB Protein Data Bank 1D3D module: displaying positional features on macromolecular assemblies.
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- Bioinformatics, 2022, v. 38, n. 12, p. 3304, doi. 10.1093/bioinformatics/btac317
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Principal Component Analysis and Related Methods for Investigating the Dynamics of Biological Macromolecules.
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- J: Multidisciplinary Scientific Journal, 2022, v. 5, n. 2, p. 298, doi. 10.3390/j5020021
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- Article
Anomalous Dynamics in Macromolecular Liquids.
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- Polymers (20734360), 2022, v. 14, n. 5, p. N.PAG, doi. 10.3390/polym14050856
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- Article
Biolayer interferometry for DNA-protein interactions.
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- PLoS ONE, 2022, v. 17, n. 2, p. 1, doi. 10.1371/journal.pone.0263322
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- Article
Beef tallow injection matrix for serial crystallography.
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- Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-021-04714-6
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- Article
Simulation of the Drift of a Macromolecular Ion in a Gas under the Action of an Electric Field.
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- Polymer Science -- Series A, 2021, v. 63, n. 6, p. 891, doi. 10.1134/S0965545X21060031
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A method for intuitively extracting macromolecular dynamics from structural disorder.
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- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-25814-x
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- Article
New high‐throughput endstation to accelerate the experimental optimization pipeline for synchrotron X‐ray footprinting.
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- Journal of Synchrotron Radiation, 2021, v. 28, n. 5, p. 1321, doi. 10.1107/S1600577521005026
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Construction of a Three-Color Prism-Based TIRF Microscope to Study the Interactions and Dynamics of Macromolecules.
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- Biology (2079-7737), 2021, v. 10, n. 7, p. 571, doi. 10.3390/biology10070571
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- Article
Liquid–Liquid Phase Separation in the Presence of Macromolecular Crowding and State-dependent Kinetics.
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- International Journal of Molecular Sciences, 2021, v. 22, n. 13, p. 6675, doi. 10.3390/ijms22136675
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Effect of Dendritic Side Groups on the Mobility of Modified Poly(epichlorohydrin) Copolymers.
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- Polymers (20734360), 2021, v. 13, n. 12, p. 1961, doi. 10.3390/polym13121961
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Model for implementation of a modern journal club in medical physics residency programs.
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- Journal of Applied Clinical Medical Physics, 2021, v. 22, n. 6, p. 253, doi. 10.1002/acm2.13250
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Biomolecules induce the synthesis of hollow hierarchical mesoporous structured hydroxyapatite microflowers: application in macromolecule drug delivery.
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- Journal of Materials Science, 2021, v. 56, n. 11, p. 7034, doi. 10.1007/s10853-020-05688-y
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- Article
Interaction of polyethylene glycol with cytochrome c investigated via in vitro and in silico approaches.
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- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-85792-4
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Mechanical time-of-flight filter based on slotted disks and helical rotor for measurement of velocities of nanoparticles.
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- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-85533-7
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Effects of cold air dehydration on icefish water dynamics and macromolecular oxidation measured by low‐field nuclear magnetic resonance and magnetic resonance imaging.
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- Food Science & Nutrition, 2021, v. 9, n. 2, p. 736, doi. 10.1002/fsn3.2039
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Signal Deconvolution and Generative Topographic Mapping Regression for Solid-State NMR of Multi-Component Materials.
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- International Journal of Molecular Sciences, 2021, v. 22, n. 3, p. 1086, doi. 10.3390/ijms22031086
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- Article
Dispersion at Single Unit TiO<sub>2</sub> Nanoparticles Reduced T<sub>g</sub>, Induced Chain Disentanglement and Reduced Tensile Modulus in Waterborne Acrylic Coatings.
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- Macromolecular Materials & Engineering, 2021, v. 306, n. 2, p. 1, doi. 10.1002/mame.202000591
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A multivariate approach to investigate the NMR CPMG pulse sequence for analysing low MW species in polymers.
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- Magnetic Resonance in Chemistry, 2021, v. 59, n. 2, p. 172, doi. 10.1002/mrc.5100
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Nanoscopic anatomy of dynamic multi-protein complexes at membranes resolved by graphene-induced energy transfer.
- Published in:
- eLife, 2021, p. 1, doi. 10.7554/eLife.62501
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- Article
Macromolecular Crowding: a Hidden Link Between Cell Volume and Everything Else.
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- Cellular Physiology & Biochemistry (Cell Physiol Biochem Press GmbH & Co. KG), 2021, v. 55, p. 25, doi. 10.33594/000000319
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