Works about LINKAGE disequilibrium

Results: 2443

The Pattern of Polymorphism in Arabidopsis thaliana.

Published in:

PLoS Biology, 2005, v. 3, n. 5, p. 1, doi. 10.1371/journal.pbio.0030196

By:

Nordborg, Magnus;
Hu, Tina T;
Ishino, Yoko;
Jhaveri, Jinal;
Toomajian, Christopher;
Zheng, Honggang;
Bakker, Erica;
Calabrese, Peter;
Gladstone, Jean;
Goyal, Rana;
Jakobsson, Mattias;
Kim, Sung;
Morozov, Yuri;
Padhukasahasram, Badri;
Plagnol, Vincent;
Rosenberg, Noah A;
Shah, Chitiksha;
Wall, Jeffrey D;
Wang, Jue;
Zhao, Keyan

Publication type:

Article

Absence of the TAP2 Human Recombination Hotspot in Chimpanzees.

Published in:

PLoS Biology, 2004, v. 2, n. 6, p. 1, doi. 10.1371/journal.pbio.0020155

By:

Ptak, Susan E;
Roeder, Amy D;
Stephens, Matthew;
Gilad, Yoav;
Pääbo, Svante;
Przeworski, Molly

Publication type:

Article

IRAK2 is associated with systemic lupus erythematosus risk.

Published in:

Clinical Rheumatology, 2020, v. 39, n. 2, p. 419, doi. 10.1007/s10067-019-04781-1

By:

Boumiza, Asma;
Zemni, Ramzi;
Sghiri, Rim;
Idriss, Nadia;
Hassine, Hana Ben;
Chabchoub, Elyes;
Mzabi, Anis;
Ghannouchi, Neirouz;
Bouajina, Elyes;
Ben Hadj Slama, Foued

Publication type:

Article

Development of two multiplex PCR systems for the analysis of 14 X-chromosomal STR loci in a southern Brazilian population sample.

Published in:

International Journal of Legal Medicine, 2012, v. 126, n. 2, p. 327, doi. 10.1007/s00414-011-0629-7

By:

Penna, Larissa;
Silva, Fernanda;
Salim, Patricia;
Ewald, Gisele;
Jobim, Mariana;
Magalhães, José;
Jobim, Luiz

Publication type:

Article

Analysis of 12 X-STRs in Greenlanders, Danes and Somalis using Argus X-12.

Published in:

International Journal of Legal Medicine, 2012, v. 126, n. 1, p. 121, doi. 10.1007/s00414-011-0609-y

By:

Tomas, Carmen;
Pereira, Vânia;
Morling, Niels

Publication type:

Article

Development of 11 X-STR loci typing system and genetic analysis in Tibetan and Northern Han populations from China.

Published in:

International Journal of Legal Medicine, 2011, v. 125, n. 5, p. 753, doi. 10.1007/s00414-011-0592-3

By:

Li, Chengtao;
Ma, Teng;
Zhao, Shumin;
Zhang, Suhua;
Xu, Jing;
Zhao, Ziqin;
Jin, Li;
Li, Shilin

Publication type:

Article

Allele and haplotype diversity of X-chromosomal STRs in Ivory Coast.

Published in:

International Journal of Legal Medicine, 2011, v. 125, n. 5, p. 749, doi. 10.1007/s00414-011-0591-4

By:

Pasino, Serena;
Caratti, Stefano;
Pero, Massimiliano;
Santovito, Alfredo;
Torre, Carlo;
Robino, Carlo

Publication type:

Article

Pedigree relationships to control inbreeding in optimum-contribution selection realise more genetic gain than genomic relationships.

Published in:

Genetics Selection Evolution, 2019, v. 51, n. 1, p. N.PAG, doi. 10.1186/s12711-019-0475-5

By:

Henryon, Mark;
Liu, Huiming;
Berg, Peer;
Su, Guosheng;
Nielsen, Hanne Marie;
Gebregiwergis, Gebreyohans T.;
Sørensen, A. Christian

Publication type:

Article

Fixed-length haplotypes can improve genomic prediction accuracy in an admixed dairy cattle population.

Published in:

Genetics Selection Evolution, 2017, v. 49, p. 1, doi. 10.1186/s12711-017-0329-y

By:

Hess, Melanie;
Druet, Tom;
Hess, Andrew;
Garrick, Dorian

Publication type:

Article

A strategy to improve phasing of whole-genome sequenced individuals through integration of familial information from dense genotype panels.

Published in:

Genetics Selection Evolution, 2017, v. 49, p. 1, doi. 10.1186/s12711-017-0321-6

By:

Faux, Pierre;
Druet, Tom

Publication type:

Article

Contributions of linkage disequilibrium and co-segregation information to the accuracy of genomic prediction.

Published in:

Genetics Selection Evolution, 2016, v. 48, p. 1, doi. 10.1186/s12711-016-0255-4

By:

Xiaochen Sun;
Fernando, Rohan;
Dekkers, Jack

Publication type:

Article

Genomic correlation: harnessing the benefit of combining two unrelated populations for genomic selection.

Published in:

Genetics Selection Evolution, 2015, v. 47, p. 1, doi. 10.1186/s12711-015-0162-0

By:

Porto-Neto, Laercio R.;
Barendse, William;
Henshall, John M.;
McWilliam, Sean M.;
Lehnert, Sigrid A.;
Reverter, Antonio

Publication type:

Article

Accuracy of estimated breeding values with genomic information on males, females, or both: an example on broiler chicken.

Published in:

Genetics Selection Evolution, 2015, v. 47, n. 1, p. 1, doi. 10.1186/s12711-015-0137-1

By:

Lourenco, Daniela A. L.;
Fragomeni, Breno O.;
Shogo Tsuruta;
Aguilar, Ignacio;
Zumbach, Birgit;
Hawken, Rachel J.;
Legarra, Andres;
Misztal, Ignacy

Publication type:

Article

Partitioning of genomic variance reveals biological pathways associated with udder health and milk production traits in dairy cattle.

Published in:

Genetics Selection Evolution, 2015, v. 47, n. 1, p. 1, doi. 10.1186/s12711-015-0132-6

By:

Edwards, Stefan M.;
Thomsen, Bo;
Madsen, Per;
Sørensen, Peter

Publication type:

Article

Imputation of non-genotyped individuals based on genotyped relatives: assessing the imputation accuracy of a real case scenario in dairy cattle.

Published in:

Genetics Selection Evolution, 2014, v. 46, p. 1, doi. 10.1186/1297-9686-46-6

By:

Bouwman, Aniek C.;
Hickey, John M.;
Calus, Mario P. L.;
Veerkamp, Roel F.

Publication type:

Article

Detection of recombination events, haplotype reconstruction and imputation of sires using half-sib SNP genotypes.

Published in:

Genetics Selection Evolution, 2014, v. 46, p. 1, doi. 10.1186/1297-9686-46-11

By:

Ferdosi, Mohammad H.;
Kinghom, Brian P.;
van der Werf, Julius H.;
Gondro, Cedric

Publication type:

Article

Error rate for imputation from the Illumina BovineSNP50 chip to the Illumina BovineHD chip.

Published in:

Genetics Selection Evolution, 2014, v. 46, p. 1, doi. 10.1186/1297-9686-46-10

By:

Schrooten, Chris;
Dassonneville, Romain;
Ducrocq, Vincent;
Brøndum, Rasmus F.;
Lund, Mogens S.;
Chen, Jun;
Zengting Liu;
González-Recio, Oscar;
Pena, Juan;
Druet, Tom

Publication type:

Article

Detection of quantitative trait loci in Bos indicus and Bos taurus cattle using genome-wide association studies.

Published in:

Genetics Selection Evolution, 2013, v. 45, n. October, p. 1, doi. 10.1186/1297-9686-45-43

By:

Bolormaa, Sunduimijid;
Pryce, Jennie E.;
Kemper, Kathryn E.;
Hayes, Ben J.;
Yuandan Zhang;
Tier, Bruce;
Barendse, William;
Reverter, Antonio;
Goddard, Mike E.

Publication type:

Article

High-density marker imputation accuracy in sixteen French cattle breeds.

Published in:

Genetics Selection Evolution, 2013, v. 45, p. 1, doi. 10.1186/1297-9686-45-33

By:

Hozé, Chris;
Fouilloux, Marie-Noëlle;
Venot, Eric;
Guillaume, François;
Dassonneville, Romain;
Fritz, Sébastien;
Ducrocq, Vincent;
Phocas, Florence;
Boichard, Didier;
Croiseau, Pascal

Publication type:

Article

Behçet's disease and genes within the major histocompatibility complex region.

Published in:

Modern Rheumatology, 2012, v. 22, n. 2, p. 178, doi. 10.3109/s10165-011-0542-4

By:

Song, Yeong;
Kang, Eun

Publication type:

Article

镉胁迫下野生大豆苗期性状全基因组关联分析及耐镉候选基因筛选.

Published in:

Journal of Henan Agricultural Sciences, 2025, v. 54, n. 1, p. 40, doi. 10.15933/j.cnki.1004-3268.2025.01.005

By:

车雅丽;
吴苏峻;
王坤杨;
王艳丽;
张锴;
乔亚科;
袁泉

Publication type:

Article

樱桃谷鸭 IP3R3 基因多态性与蛋壳品质的关联分析.

Published in:

Journal of Henan Agricultural Sciences, 2021, v. 50, n. 6, p. 142, doi. 10.15933/j.cnki.1004-3268.2021.06.017

By:

廖朝美;
李杰章;
,游敏芳;
谭光辉;
张依裕

Publication type:

Article

Association analysis of economic traits and mining of excellent alleles of Ziziphus jujuba var. spinosa.

Published in:

Journal of Northwest A & F University - Natural Science Edition, 2023, v. 51, n. 6, p. 28, doi. 10.13207/j.cnki.jnwafu.2023.06.004

By:

WANG Ruoxi;
CHANG Jing;
QU Kailun;
WEN Jiaxing;
LIU Qingbai;
ZHANG Guoqing;
DONG Shengjun

Publication type:

Article

耗牛SMADi基因SNPs检测及其与生长性状的关联分析.

Published in:

Journal of Northwest A & F University - Natural Science Edition, 2023, v. 51, n. 3, p. 1, doi. 10.13207/j.cnki.jnwafu.2023.03.001

By:

周建强;
祁增源;
韩银仓;
刘秀;
爲孙永刚

Publication type:

Article

Genetic consequences of allopatric and sympatric divergence in Arctic charr ( Salvelinus alpinus (L.)) from Fjellfrøsvatn as inferred by microsatellite markers.

Published in:

Hydrobiologia, 2016, v. 783, n. 1, p. 257, doi. 10.1007/s10750-016-2648-3

By:

Præbel, K.;
Couton, M.;
Knudsen, R.;
Amundsen, P.-A.

Publication type:

Article

Pharmacogenomic Considerations for Anticoagulant Prescription in Patients with Hereditary Haemorrhagic Telangiectasia.

Published in:

Journal of Clinical Medicine, 2023, v. 12, n. 24, p. 7710, doi. 10.3390/jcm12247710

By:

McCarley, Sarah C.;
Murphy, Daniel A.;
Thompson, Jack;
Shovlin, Claire L.

Publication type:

Article

Establishing a Prediction Model for the Efficacy of Platinum—Based Chemotherapy in NSCLC Based on a Two Cohorts GWAS Study.

Published in:

Journal of Clinical Medicine, 2023, v. 12, n. 4, p. 1318, doi. 10.3390/jcm12041318

By:

Xiao, Qi;
Mao, Chenxue;
Gao, Ying;
Huang, Hanxue;
Yu, Bing;
Yu, Lulu;
Li, Xi;
Mao, Xiaoyuan;
Zhang, Wei;
Yin, Jiye;
Liu, Zhaoqian

Publication type:

Article

Large-Scale Genetic Correlation Analysis between Spondyloarthritis and Human Blood Metabolites.

Published in:

Journal of Clinical Medicine, 2023, v. 12, n. 3, p. 1201, doi. 10.3390/jcm12031201

By:

Yang, Mingyi;
Xu, Jiawen;
Zhang, Feng;
Luo, Pan;
Xu, Ke;
Feng, Ruoyang;
Xu, Peng

Publication type:

Article

Actual Associations between HLA Haplotype and Graves' Disease Development.

Published in:

Journal of Clinical Medicine, 2022, v. 11, n. 9, p. 2492, doi. 10.3390/jcm11092492

By:

Zawadzka-Starczewska, Katarzyna;
Tymoniuk, Bogusław;
Stasiak, Bartłomiej;
Lewiński, Andrzej;
Stasiak, Magdalena

Publication type:

Article

The Influence of Genetics in Myopia Control: A Pilot Study.

Published in:

Journal of Clinical Medicine, 2021, v. 10, n. 4, p. 808, doi. 10.3390/jcm10040808

By:

Alvarez-Peregrina, Cristina;
Sánchez-Tena, Miguel Ángel;
Martinez-Perez, Clara;
Santiago-Dorrego, Catalina;
Yvert, Thomas;
Andreu-Vazquez, Cristina;
Villa-Collar, Cesar;
Winn, Bryan;
Pereira, António Queirós

Publication type:

Article

A New Risk Variant for Multiple Sclerosis at 11q23.3 Locus Is Associated with Expansion of CXCR5+ Circulating Regulatory T Cells.

Published in:

Journal of Clinical Medicine, 2020, v. 9, n. 3, p. 625, doi. 10.3390/jcm9030625

By:

Gil-Varea, Elia;
Fedetz, Maria;
Eixarch, Herena;
Spataro, Nino;
Villar, Luisa María;
Urcelay, Elena;
Saiz, Albert;
Fernández, Óscar;
Leyva, Laura;
Ramió-Torrentà, Lluís;
Vandenbroeck, Koen;
Otaegui, David;
Castillo-Triviño, Tamara;
Izquierdo, Guillermo;
Malhotra, Sunny;
Bosch, Elena;
Navarro, Arcadi;
Alcina, Antonio;
Montalban, Xavier;
Matesanz, Fuencisla

Publication type:

Article

P58 - VviAGL11 molecular mechanism in seed development.

Published in:

Julius-Kühn-Archiv, 2022, n. 470, p. 140

By:

Amato, Alessandra;
Cardone, Maria Francesca;
Ocarez, Nallatt;
Alagna, Fiammetta;
Ruperti, Benedetto;
Fattorini, Chiara;
Velasco, Riccardo;
Mejía, Nilo;
Zenoni, Sara;
Carlo, Bergamini

Publication type:

Article

Population structure and genetic diversity of U.S. Polypay Sheep in the National Sheep Improvement Program.

Published in:

2024

By:

Wilson, Carrie S.;
Petersen, Jessica L.;
Brito, Luiz F.;
Freking, Brad A.;
Nilson, Sara M.;
Lewis, Ronald M.

Publication type:

Abstract

Characterizing local pig breeds as reservoirs for the domestic pig genetic variability worldwide via contributions to gene diversity and allelic richness.

Published in:

Journal of Animal Science, 2024, v. 102, p. 1, doi. 10.1093/jas/skae329

By:

Arias, Katherine D;
Fernández, Iván;
Gutiérrez, Juan Pablo;
Bozzi, Riccardo;
Álvarez, Isabel;
Goyache, Félix

Publication type:

Article

Comparison of Changes in Snp Effects and Gebv Using Different Training Populations in Simulated Data.

Published in:

Journal of Animal Science, 2023, v. 101, p. 553, doi. 10.1093/jas/skad281.649

By:

Dutta, Gaurav;
Santana, Bruna;
Ampofo, Issabelle;
Curutchet, Agustin;
Riser, Molly M.;
Fragomeni, Breno O.

Publication type:

Article

Genomic Improvement of Disease Resistance Using Two Breeding Strategies in a Population of Penaeus Vannamei (Pacific White shrimp): a Simulation Study.

Published in:

Journal of Animal Science, 2023, v. 101, p. 347, doi. 10.1093/jas/skad281.412

By:

Ampofo, Issabelle;
Kobayashi, Julian;
Miller, Clara;
O'Neil, Shauneen;
Dhar, Arun;
Fragomeni, Breno O.

Publication type:

Article

PSIII-4 Late-Breaking: Genetic Marker Association Study of Heifer Pregnancy in Red Angus Cattle.

Published in:

2022

By:

Saad, Hamad M.;
Gonzalez-Berrios, Carolina L.;
Speidel, Scott E.;
Enns, R. Mark;
Boldt, Ryan J.;
Hansen, Thomas R. R.;
Thomas, Milt G.

Publication type:

Abstract

Selection footprints in Russian red cattle identified by linkage disequilibrium blocks based on SNP data.

Published in:

Journal of Animal Science, 2021, v. 99, p. 255

By:

Sermyagin, Alexander A.;
Dotsev, Arsen V.;
Abdelmanova, Alexandra S.;
Sölkner, Johann;
Zinovieva, Natalia A.

Publication type:

Article

Partitioning SNP Heritability in Related Individuals.

Published in:

Journal of Animal Science, 2021, v. 99, p. 24, doi. 10.1093/jas/skab235.040

By:

Jicai Jiang;
Li Ma;
O'Connell, Jeffrey

Publication type:

Article

Single-step Genomic BLUP Fitting Snps or Haplotypes in Genetically-diverse Populations: A Simulation Study.

Published in:

2021

By:

Araujo, Andre C.;
Carneiro, Paulo;
Oliveira, Hinayah R.;
Schenkel, Flavio S.;
Brito, Luiz F.

Publication type:

Abstract

Combining Different Marker Prioritization Methods in the Analysis of High-density and Sequence Data.

Published in:

Journal of Animal Science, 2021, v. 99, p. 21, doi. 10.1093/jas/skab235.035

By:

Ling, Ashley S.;
Hay, El Hamidi;
Aggrey, Samuel E.;
Rekaya, Romdhane

Publication type:

Article

Assessing single-nucleotide polymorphism selection methods for the development of a low-density panel optimized for imputation in South African Drakensberger beef cattle.

Published in:

Journal of Animal Science, 2021, v. 99, n. 7, p. 1, doi. 10.1093/jas/skab118

By:

Lashmar, Simon F;
Berry, Donagh P;
Pierneef, Rian;
Muchadeyi, Farai C;
Visser, Carina

Publication type:

Article

Analysis of four complete linkage sequence variants within a novel lncRNA located in a growth QTL on chromosome 1 related to growth traits in chickens.

Published in:

Journal of Animal Science, 2020, v. 98, n. 5, p. N.PAG, doi. 10.1093/jas/skaa122

By:

Li, Wenya;
Jing, Zhenzhu;
Cheng, Yingying;
Wang, Xiangnan;
Li, Donghua;
Han, Ruili;
Li, Wenting;
Li, Guoxi;
Sun, Guirong;
Tian, Yadong;
Liu, Xiaojun;
Kang, Xiangtao;
Li, Zhuanjian

Publication type:

Article

Genomic predictions in purebreds with a multibreed genomic relationship matrix.

Published in:

Journal of Animal Science, 2019, v. 97, n. 11, p. 4418, doi. 10.1093/jas/skz296

By:

Steyn, Yvette;
Lourenco, Daniela A L;
Misztal, Ignacy

Publication type:

Article

64 The impact of putative causal variants and animal misidentification on genome-wide association studies for carcass traits in beef cattle.

Published in:

Journal of Animal Science, 2019, v. 97, p. 36, doi. 10.1093/jas/skz122.066

By:

Upperman, Lindsay R;
Pollack, E John;
Spangler, Matthew L

Publication type:

Article

RAPID COMMUNICATION: Multi-breed validation study unraveled genomic regions associated with puberty traits segregating across tropically adapted breeds 1.

Published in:

Journal of Animal Science, 2019, v. 97, n. 7, p. 3027, doi. 10.1093/jas/skz121

By:

Melo, Thaise P;
Fortes, Marina R S;
Junior, Gerardo A Fernandes;
Albuquerque, Lucia G;
Carvalheiro, Roberto

Publication type:

Article

High imputation accuracy from informative low-to-medium density single nucleotide polymorphism genotypes is achievable in sheep.

Published in:

Journal of Animal Science, 2019, v. 97, n. 4, p. 1550, doi. 10.1093/jas/skz043

By:

O'Brien, Aine C;
Judge, Michelle M;
Fair, Sean;
Berry, Donagh P

Publication type:

Article

Including crossbred pigs in the genomic relationship matrix through utilization of both linkage disequilibrium and linkage analysis.

Published in:

Journal of Animal Science, 2017, v. 95, n. 12, p. 5197, doi. 10.2527/jas2017.1705

By:

Iversen, M. W.;
Nordbø, Ø.;
Gjerlaug-Enger, E.;
Grindflek, E.;
Lopes, M. S.;
Meuwissen, T. H. E.

Publication type:

Article

Linkage disequilibrium, persistence of phase, and effective population size in Spanish local beef cattle breeds assessed through a high-density single nucleotide polymorphism chip.

Published in:

Journal of Animal Science, 2016, v. 94, n. 7, p. 2779, doi. 10.2527/jas.2016-0425

By:

Cañas-Álvarez, J. J.;
Mouresan, E. F.;
Varona, L.;
Díaz, C.;
Molina, A.;
Baro, J. A.;
Altarriba, J.;
Carabaño, M. J.;
Casellas, J.;
Piedrafita, J.

Publication type:

Article

Selection of SNP from 50K and 777K arrays to predict breed of origin in cattle.

Published in:

Journal of Animal Science, 2013, v. 91, n. 11, p. 5128, doi. 10.2527/jas.2013-6678

By:

Hulsegge, B.;
Calus, M. P. L.;
Windig, J. J.;
Hoving-Bolink, A. H.;
Maurice-van Eijndhoven, M. H. T.;
Hiemstra, S. J.

Publication type:

Article