Works matching DE "INVERTED repeats (Genetics)"

Results: 301

Molecular characterization of the Yp11.2 region deletion in the Chinese Han population.

Published in:

International Journal of Legal Medicine, 2021, v. 135, n. 4, p. 1351, doi. 10.1007/s00414-021-02596-x

By:

Pang, Qianqian;
Lin, Qingai;
Wang, Di;
Sun, Zhenghao;
Wang, Junfang

Publication type:

Article

Plastid genome structure and phylogenomics of Nymphaeales: conserved gene order and new insights into relationships.

Published in:

Plant Systematics & Evolution, 2017, v. 303, n. 9, p. 1251, doi. 10.1007/s00606-017-1436-5

By:

Gruenstaeudl, Michael;
Nauheimer, Lars;
Borsch, Thomas

Publication type:

Article

The First Plastid Genome of the Holoparasitic Genus Prosopanche (Hydnoraceae).

Published in:

Plants (2223-7747), 2020, v. 9, n. 3, p. 306, doi. 10.3390/plants9030306

By:

Jost, Matthias;
Naumann, Julia;
Rocamundi, Nicolás;
Cocucci, Andrea A.;
Wanke, Stefan

Publication type:

Article

Comparative plastome analysis of Blumea, with implications for genome evolution and phylogeny of Asteroideae.

Published in:

Ecology & Evolution (20457758), 2021, v. 11, n. 12, p. 7810, doi. 10.1002/ece3.7614

By:

Abdullah;
Mehmood, Furrukh;
Rahim, Abdur;
Heidari, Parviz;
Ahmed, Ibrar;
Poczai, Péter

Publication type:

Article

Lineage‐specific plastid degradation in subtribe Gentianinae (Gentianaceae).

Published in:

Ecology & Evolution (20457758), 2021, v. 11, n. 7, p. 3286, doi. 10.1002/ece3.7281

By:

Fu, Peng‐Cheng;
Sun, Shan‐Shan;
Twyford, Alex D.;
Li, Bei‐Bei;
Zhou, Rui‐Qi;
Chen, Shi‐Long;
Gao, Qing‐Bo;
Favre, Adrien

Publication type:

Article

Caught in the Act: Variation in plastid genome inverted repeat expansion within and between populations of Medicago minima.

Published in:

Ecology & Evolution (20457758), 2020, v. 10, n. 21, p. 12129, doi. 10.1002/ece3.6839

By:

Choi, In‐Su;
Jansen, Robert;
Ruhlman, Tracey

Publication type:

Article

Organization, Phylogenetic Marker Exploitation, and Gene Evolution in the Plastome of Thalictrum (Ranunculaceae).

Published in:

Frontiers in Plant Science, 2022, v. 13, p. 1, doi. 10.3389/fpls.2022.897843

By:

Xiang, Kun-Li;
Mao, Wei;
Peng, Huan-Wen;
Erst, Andrey S.;
Yang, Ying-Xue;
He, Wen-Chuang;
Wu, Zhi-Qiang

Publication type:

Article

Chloroplast Genome Evolution in Four Montane Zingiberaceae Taxa in China.

Published in:

Frontiers in Plant Science, 2022, v. 12, p. 1, doi. 10.3389/fpls.2021.774482

By:

Yang, Qian;
Fu, Gao-Fei;
Wu, Zhi-Qiang;
Li, Li;
Zhao, Jian-Li;
Li, Qing-Jun

Publication type:

Article

Optimizing RNAi-Target by Nicotiana benthamiana -Soybean Mosaic Virus System Drives Broad Resistance to Soybean Mosaic Virus in Soybean.

Published in:

Frontiers in Plant Science, 2021, v. 12, p. 1, doi. 10.3389/fpls.2021.739971

By:

Jiang, Hua;
Li, Kai;
Gai, Junyi

Publication type:

Article

Comparative and Evolutionary Analyses on the Complete Plastomes of Five Kalanchoe Horticultural Plants.

Published in:

Frontiers in Plant Science, 2021, v. 12, p. 1, doi. 10.3389/fpls.2021.705874

By:

Tian, Xiangyu;
Guo, Jia;
Zhou, Xiaojiao;
Ma, Ke;
Ma, Yonggui;
Shi, Tuansheng;
Shi, Yuhua

Publication type:

Article

Hybrid Sequencing Resolved Inverted Terminal Repeats in the Genome of Megavirus Baoshan.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.831659

By:

Xia, Yucheng;
Cheng, Huanyu;
Zhong, Jiang

Publication type:

Article

Genomic Sequencing and Analysis of a Novel Human Cowpox Virus With Mosaic Sequences From North America and Old World Orthopoxvirus.

Published in:

Frontiers in Microbiology, 2022, p. 1, doi. 10.3389/fmicb.2022.868887

By:

Diaz-Cánova, Diana;
Moens, Ugo L.;
Brinkmann, Annika;
Nitsche, Andreas;
Okeke, Malachy Ifeanyi

Publication type:

Article

The Genome of the Acid Soil-Adapted Strain Rhizobium favelukesii OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.735911

By:

Eardly, Bertrand;
Meor Osman, Wan Adnawani;
Ardley, Julie;
Zandberg, Jaco;
Gollagher, Margaret;
van Berkum, Peter;
Elia, Patrick;
Marinova, Dora;
Seshadri, Rekha;
Reddy, T. B. K.;
Ivanova, Natalia;
Pati, Amrita;
Woyke, Tanja;
Kyrpides, Nikos;
Loedolff, Matthys;
Laird, Damian W.;
Reeve, Wayne

Publication type:

Article

Construction of chloroplast transformation vector and its functional evaluation in <italic>Momordica charantia</italic> L.

Published in:

3 Biotech, 2018, v. 8, n. 3, p. 0, doi. 10.1007/s13205-018-1160-z

By:

Narra, Muralikrishna;
Kota, Srinivas;
Velivela, Yashodhara;
Ellendula, Raghu;
Allini, V. Rao;
Abbagani, Sadanandam

Publication type:

Article

An escalating continuum of learning and attention difficulties from premutation to full mutation in female carriers of FMR1 expansion.

Published in:

Frontiers in Neurology, 2023, p. 1, doi. 10.3389/fneur.2023.1135630

By:

Gabis, Lidia V.;
Shaham, Meirav;
Attia, Odelia Leon;
Kowal, Tamar;
David, Sivan;
Banet-Levi, Yonit;
Shefer, Shahar;
Gabis, Daniel;
Mula-Topf, Dana;
Bar, Michal Avrech;
Bart, Orit;
Segal, Osnat

Publication type:

Article

Amplification of miniature inverted-repeat transposable elements and the associated impact on gene regulation and alternative splicing in mulberry (Morus notabilis).

Published in:

Mobile DNA, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1186/s13100-019-0169-0

By:

Xin, Youchao;
Ma, Bi;
Xiang, Zhonghuai;
He, Ningjia

Publication type:

Article

Intraspecific Chloroplast Genome Genetic Polymorphism of Pinellia ternata (Xi Junecry) and Its Revelation of a Single Origin in Phylogeny.

Published in:

Genes, 2024, v. 15, n. 12, p. 1638, doi. 10.3390/genes15121638

By:

Xing, Wenlong;
Yu, Weihan;
Kong, Yuanyuan;
Ren, Xian;
Zhu, Liuying;
Li, Qingyang;
Yang, Yujie;
Cheng, Yueqin;
Wang, Hongwei

Publication type:

Article

Diversification of Transposable Elements in Arthropods and Its Impact on Genome Evolution.

Published in:

Genes, 2019, v. 10, n. 5, p. 338, doi. 10.3390/genes10050338

By:

Wu, Changcheng;
Lu, Jian

Publication type:

Article

Regulatory Elements Located in the Upstream Region of the Rhizobium leguminosarum rosR Global Regulator Are Essential for Its Transcription and mRNA Stability.

Published in:

Genes, 2017, v. 8, n. 12, p. 388, doi. 10.3390/genes8120388

By:

Rachwał, Kamila;
Lipa, Paulina;
Wojda, Iwona;
Vinardell, José-María;
Janczarek, Monika

Publication type:

Article

Genome-wide analyses of miniature inverted-repeat transposable elements reveals new insights into the evolution of the Triticum-Aegilops group.

Published in:

PLoS ONE, 2018, v. 13, n. 10, p. 1, doi. 10.1371/journal.pone.0204972

By:

Keidar-Friedman, Danielle;
Bariah, Inbar;
Kashkush, Khalil

Publication type:

Article

Complete chloroplast genome sequence and comparative analysis of loblolly pine (Pinus taeda L.) with related species.

Published in:

PLoS ONE, 2018, v. 13, n. 3, p. 1, doi. 10.1371/journal.pone.0192966

By:

Asaf, Sajjad;
Khan, Abdul Latif;
Khan, Muhammad Aaqil;
Shahzad, Raheem;
Lubna, null;
Kang, Sang Mo;
Al-Harrasi, Ahmed;
Al-Rawahi, Ahmed;
Lee, In-Jung

Publication type:

Article

MiteFinderII: a novel tool to identify miniature inverted-repeat transposable elements hidden in eukaryotic genomes.

Published in:

BMC Medical Genomics, 2018, v. 11, n. 5, p. N.PAG, doi. 10.1186/s12920-018-0418-y

By:

Hu, Jialu;
Zheng, Yan;
Shang, Xuequn

Publication type:

Article

Characterization of the complete mitochondrial genome of a coconut crab, Birgus latro (Linnaeus, 1767) (Decapoda: Anomura: Coenobitidae), from Okinawa, Japan.

Published in:: Journal of Crustacean Biology, 2020, v. 40, n. 4, p. 390, doi. 10.1093/jcbiol/ruaa032
Publication type:: Article

Integrative mapping analysis of chicken microchromosome 16 organization.

Published in:

BMC Genomics, 2010, v. 11, n. 1, p. 1, doi. 10.1186/1471-2164-11-616

By:

Solinhac, Romain;
Leroux, Sophie;
Galkina, Svetlana;
Chazara, Olympe;
Feve, Katia;
Vignoles, Florence;
Morisson, Mireille;
Derjusheva, Svetlana;
Bed'hom, Bertrand;
Vignal, Alain;
Fillon, Valérie;
Pitel, Frédérique

Publication type:

Article

Alu-Alu Fusion Sequences Identified at Junction Sites of Copy Number Amplified Regions in Cancer Cell Lines.

Published in:

Cytogenetic & Genome Research, 2012, v. 139, n. 1, p. 1, doi. 10.1159/000342885

By:

Kitada, K.;
Aikawa, S.;
Aida, S.

Publication type:

Article

A bi‐organellar phylogenomic study of Pandanales: inference of higher‐order relationships and unusual rate‐variation patterns.

Published in:

Cladistics, 2020, v. 36, n. 5, p. 481, doi. 10.1111/cla.12417

By:

Soto Gomez, Marybel;
Lin, Qianshi;
Silva Leal, Eduardo;
Gallaher, Timothy J.;
Scherberich, David;
Mennes, Constantijn B.;
Smith, Selena Y.;
Graham, Sean W.

Publication type:

Article

Characteristics and possible mechanisms of formation of microinversions distinguishing human and chimpanzee genomes.

Published in:

Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-021-04621-w

By:

Potapova, Nadezhda A.;
Kondrashov, Alexey S.;
Mirkin, Sergei M.

Publication type:

Article

Mycoheterotrophic Epirixanthes (Polygalaceae) has a typical angiosperm mitogenome but unorthodox plastid genomes.

Published in:

Annals of Botany, 2019, v. 124, n. 5, p. 791, doi. 10.1093/aob/mcz114

By:

Petersen, G;
Darby, H;
Lam, V K Y;
Pedersen, H Æ;
Merckx, V S F T;
Zervas, A;
Seberg, O;
Graham, S W

Publication type:

Article

Variable presence of the inverted repeat and plastome stability in Erodium.

Published in:

Annals of Botany, 2016, v. 117, n. 7, p. 1209, doi. 10.1093/aob/mcw065

By:

Blazier, John C.;
Jansen, Robert K.;
Mower, Jeffrey P.;
Govindu, Madhu;
Jin Zhang;
Mao-Lun Weng;
Ruhlman, Tracey A.

Publication type:

Article

Terniopsis yongtaiensis (Podostemaceae), a new species from South East China based on morphological and genomic data.

Published in:

PhytoKeys, 2022, n. 194, p. 105, doi. 10.3897/phytokeys.194.83080

By:

Miao Zhang;
Xiao-Hui Zhang;
Chang-Li Ge;
Bing-Hua Chen

Publication type:

Article

Proposal to recognise the tribes Adinobotryeae and Glycyrrhizeae (Leguminosae subfamily Papilionoideae) based on chloroplast phylogenomic evidence.

Published in:

PhytoKeys, 2021, v. 181, p. 65, doi. 10.3897/phytokeys.181.71259

By:

Lei Duan;
Li-Na Han;
Sirichamorn, Yotsawate;
Jun Wen;
Compton, James A.;
Shuang-Wen Deng;
Arslan, Emine;
Kuddisi Ertuğrul;
Schrire, Brian;
Hong-Feng Chen

Publication type:

Article

The Landscape of Micro-Inversions Provide Clues for Population Genetic Analysis of Humans.

Published in:

Interdisciplinary Sciences: Computational Life Sciences, 2020, v. 12, n. 4, p. 499, doi. 10.1007/s12539-020-00392-6

By:

Qu, Li;
Wang, Luotong;
He, Feifei;
Han, Yilun;
Yang, Longshu;
Wang, May D.;
Zhu, Huaiqiu

Publication type:

Article

Identification, Diversity and Evolution of MITEs in the Genomes of Microsporidian Nosema Parasites.

Published in:

PLoS ONE, 2015, v. 10, n. 4, p. 1, doi. 10.1371/journal.pone.0123170

By:

He, Qiang;
Ma, Zhenggang;
Dang, Xiaoqun;
Xu, Jinshan;
Zhou, Zeyang

Publication type:

Article

The Transition from Primary siRNAs to Amplified Secondary siRNAs That Regulate Chalcone Synthase During Development of Glycine max Seed Coats.

Published in:

PLoS ONE, 2013, v. 8, n. 10, p. 1, doi. 10.1371/journal.pone.0076954

By:

Cho, Young B.;
Jones, Sarah I.;
Vodkin, Lila

Publication type:

Article

Mitochondrial Inverted Repeats Strongly Correlate with Lifespan: mtDNA Inversions and Aging.

Published in:

PLoS ONE, 2013, v. 8, n. 9, p. 1, doi. 10.1371/journal.pone.0073318

By:

Yang, Jiang-Nan;
Seluanov, Andrei;
Gorbunova, Vera

Publication type:

Article

An Inverted Repeat in the ospC Operator Is Required for Induction in Borrelia burgdorferi.

Published in:

PLoS ONE, 2013, v. 8, n. 7, p. 1, doi. 10.1371/journal.pone.0068799

By:

Drecktrah, Dan;
Hall, Laura S.;
Hoon-Hanks, Laura L.;
Samuels, D. Scott

Publication type:

Article

RNA Interference Is Responsible for Reduction of Transgene Expression after Sleeping Beauty Transposase Mediated Somatic Integration.

Published in:

PLoS ONE, 2012, v. 7, n. 5, p. 1, doi. 10.1371/journal.pone.0035389

By:

Rauschhuber, Christina;
Ehrhardt, Anja

Publication type:

Article

Sequencing and characterization of the complete mitochondrial genomes of three Pneumocystis species provide new insights into divergence between human and rodent Pneumocystis.

Published in:

FASEB Journal, 2013, v. 27, n. 5, p. 1962, doi. 10.1096/fj.12-224444

By:

Liang Ma;
Da-Wei Huang;
Cuomo, Christina A.;
Sykes, Sean;
Fantoni, Giovanna;
Das, Biswajit;
Sherman, Brad T.;
Jun Yang;
Huber, Charles;
Yun Xia;
Davey, Emma;
Kutty, Geetha;
Bishop, Lisa;
Sassi, Monica;
Lempicki, Richard A.;
Kovacs, Joseph A.

Publication type:

Article

Sequence properties of certain GC rich avian genes, their origins and absence from genome assemblies: case studies.

Published in:

BMC Genomics, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12864-019-6131-1

By:

Beauclair, Linda;
Ramé, Christelle;
Arensburger, Peter;
Piégu, Benoît;
Guillou, Florian;
Dupont, Joëlle;
Bigot, Yves

Publication type:

Article

Mutator-Like Elements withMultiple Long Terminal Inverted Repeats in Plants.

Published in:

Comparative & Functional Genomics, 2012, p. 1, doi. 10.1155/2012/695827

By:

Ferguson, Ann A.;
Ning Jiang

Publication type:

Article

Complete chloroplast genome of endangered Bruguiera hainesii C.G.Rogers 1919 and phylogenetic analysis with associated species.

Published in:

Biomedical & Biotechnology Research Journal, 2023, v. 7, n. 4, p. 590, doi. 10.4103/bbrj.bbrj_218_23

By:

Tran, Viet;
Trang Hoang, Thi;
Pham, Mai;
Vu, Dinh;
Nguyen, Quoc

Publication type:

Article

The complete chloroplast genome of Tibetan hulless barley.

Published in:

Mitochondrial DNA. Part A, 2017, v. 28, n. 3, p. 324, doi. 10.3109/19401736.2015.1122765

By:

Zeng, Quan Xing;
Yuan, Jun Hong;
Wang, Lin Yu;
Xu, Jun Qi;
Nyima, Tashi

Publication type:

Article

The first complete chloroplast genome sequence from Violaceae ( Viola seoulensis ).

Published in:

Mitochondrial DNA. Part A, 2017, v. 28, n. 1, p. 67, doi. 10.3109/19401736.2015.1110801

By:

Cheon, Kyeong-Sik;
Yang, Jong-Cheol;
Kim, Kyung-Ah;
Jang, Su-Kil;
Yoo, Ki-Oug

Publication type:

Article

Complete chloroplast genome sequence of Castanopsis concinna (Fagaceae), a threatened species from Hong Kong and South-Eastern China.

Published in:

Mitochondrial DNA. Part A, 2017, v. 28, n. 1, p. 65, doi. 10.3109/19401736.2015.1110800

By:

Daniel Hinsinger, Damien;
Sergej Strijk, Joeri

Publication type:

Article

The complete chloroplast genome sequence of Schefflera octophylla.

Published in:

Mitochondrial DNA. Part A, 2016, v. 27, n. 6, p. 4685, doi. 10.3109/19401736.2015.1106502

By:

Zong, Xuefeng;
Song, Jixuan;
Lv, Jun;
Wang, Sangen

Publication type:

Article

The complete chloroplast genome sequence of Salix babylonica.

Published in:

Mitochondrial DNA. Part A, 2016, v. 27, n. 6, p. 4683, doi. 10.3109/19401736.2015.1106501

By:

Wang, Yiming;
Yang, Hailing

Publication type:

Article

The complete chloroplast genome of Antarctic pearlwort, Colobanthus quitensis (Kunth) Bartl. (Caryophyllaceae).

Published in:

Mitochondrial DNA. Part A, 2016, v. 27, n. 6, p. 4677, doi. 10.3109/19401736.2015.1106498

By:

Kang, Yoonjee;
Lee, Hyoungseok;
Kim, Mi-kyeong;
Shin, Seung Chul;
Park, Hyun;
Lee, Jungeun

Publication type:

Article

Complete chloroplast genome of Ficus racemosa (Moraceae).

Published in:

Mitochondrial DNA. Part A, 2016, v. 27, n. 6, p. 4655, doi. 10.3109/19401736.2015.1106488

By:

Mao, Qi;
Bi, Guiqi

Publication type:

Article

The complete chloroplast genome sequence of Maddenia hypoleuca koehne (Prunoideae, Rosaceae).

Published in:

Mitochondrial DNA. Part A, 2016, v. 27, n. 6, p. 4651, doi. 10.3109/19401736.2015.1106486

By:

Chen, Tao;
Zhang, Jing;
Liu, Yin;
Wang, Hao;
Wang, Juan;
Chen, Qing;
Tang, Hao-Ru;
Wang, Xiao-Rong

Publication type:

Article

The complete chloroplast genome sequence of Indian mustard ( Brassica juncea L.).

Published in:

Mitochondrial DNA. Part A, 2016, v. 27, n. 6, p. 4622, doi. 10.3109/19401736.2015.1101586

By:

Prabhudas, Sudheesh K.;
Raju, Balaji;
Kannan Thodi, Shahid;
Parani, Madasamy;
Natarajan, Purushothaman

Publication type:

Article