Works matching DE "INTEGRASES"

Results: 200

Retrointegration2023—Papers from the 7th International Conference on Retroviral Integration.

Published in:

2025

By:

Engelman, Alan N.;
Grandgenett, Duane P.;
Maertens, Goedele N.;
Yoder, Kristine E.;
Kvaratskhelia, Mamuka

Publication type:

Editorial

Iterative marker excision system.

Published in:

Applied Microbiology & Biotechnology, 2014, v. 98, n. 10, p. 4557, doi. 10.1007/s00253-014-5523-z

By:

Myronovskyi, Maksym;
Rosenkränzer, Birgit;
Luzhetskyy, Andriy

Publication type:

Article

TG1 integrase-based system for site-specific gene integration into bacterial genomes.

Published in:

Applied Microbiology & Biotechnology, 2013, v. 97, n. 9, p. 4039, doi. 10.1007/s00253-012-4491-4

By:

Muroi, Tetsurou;
Kokuzawa, Takaaki;
Kihara, Yoshihiko;
Kobayashi, Ryuichi;
Hirano, Nobutaka;
Takahashi, Hideo;
Haruki, Mitsuru

Publication type:

Article

Site-specific genome integration in alphaproteobacteria mediated by TG1 integrase.

Published in:

Applied Microbiology & Biotechnology, 2012, v. 93, n. 1, p. 295, doi. 10.1007/s00253-011-3545-3

By:

Morita, Kentaro;
Morimura, Kohji;
Fusada, Naoki;
Komatsu, Mamoru;
Ikeda, Haruo;
Hirano, Nobutaka;
Takahashi, Hideo

Publication type:

Article

A broad-host-range event detector: expanding and quantifying performance between Escherichia coli and Pseudomonas species.

Published in:

Synthetic Biology (23977000), 2020, v. 5, n. 1, p. 1, doi. 10.1093/synbio/ysaa002

By:

Khan, Nymul;
Yeung, Enoch;
Farris, Yuliya;
Fansler, Sarah J;
Bernstein, Hans C

Publication type:

Article

pH tunable self-assembly of chicoric acid and their biocompatibility studies.

Published in:

Supramolecular Chemistry, 2011, v. 23, n. 10, p. 678, doi. 10.1080/10610278.2011.601309

By:

Smoak, EvanM.;
Fath, KarlR.;
Barnaby, StaceyN.;
Grant, ValerieC.;
Banerjee, IpsitaA.

Publication type:

Article

Study of Structure-active Relationship for Inhibitors of HIV-1 Integrase LEDGF/p75 Interaction by Machine Learning Methods.

Published in:

Molecular Informatics, 2017, v. 36, n. 7, p. n/a, doi. 10.1002/minf.201600127

By:

Li, Yang;
Wu, Yanbin;
Yan, Aixia

Publication type:

Article

HIV-1 integrase inhibitors targeting various DDE transposases: Retroviral integration versus RAG-mediated recombination.

Published in:

Molecular Medicine Reports, 2019, v. 20, n. 6, p. 4749, doi. 10.3892/mmr.2019.10777

By:

Mușat, Mihaela Georgiana;
Nițulescu, George Mihai;
Surleac, Marius;
Tsatsakis, Aristidis;
Spandidos, Demetrios A.;
Margină, Denisa

Publication type:

Article

Phage vB_KlebPS_265 Active Against Resistant/MDR and Hypermucoid K2 Strains of Klebsiella pneumoniae.

Published in:

Viruses (1999-4915), 2025, v. 17, n. 1, p. 83, doi. 10.3390/v17010083

By:

Yakubovskij, Vyacheslav I.;
Morozova, Vera V.;
Kozlova, Yuliya N.;
Tikunov, Artem Yu.;
Fedorets, Valeria A.;
Zhirakovskaya, Elena V.;
Babkin, Igor V.;
Bardasheva, Alevtina V.;
Tikunova, Nina V.

Publication type:

Article

Jumping Ahead with Sleeping Beauty : Mechanistic Insights into Cut-and-Paste Transposition.

Published in:

Viruses (1999-4915), 2021, v. 13, n. 1, p. 76, doi. 10.3390/v13010076

By:

Ochmann, Matthias T.;
Ivics, Zoltán;
Grandgenett, Duane P.;
Zoulim, Fabien

Publication type:

Article

Antibiotic-resistant genes and antibiotic-resistant bacteria in the effluent of urban residential areas, hospitals, and a municipal wastewater treatment plant system.

Published in:

Environmental Science & Pollution Research, 2015, v. 22, n. 6, p. 4587, doi. 10.1007/s11356-014-3665-2

By:

Li, Jianan;
Cheng, Weixiao;
Xu, Like;
Chen, Hong;
Strong, P.

Publication type:

Article

Diversity of integrase-hydrolyzing IgGs and IgMs from sera of HIV-infected patients.

Published in:

Biochemistry (00062979), 2011, v. 76, n. 12, p. 1300, doi. 10.1134/S0006297911120030

By:

Baranova, S.;
Buneva, V.;
Kharitonova, M.;
Sizyakina, L.;
Zakharova, O.;
Nevinsky, G.

Publication type:

Article

Cryo-EM structure of the Rous sarcoma virus octameric cleaved synaptic complex intasome.

Published in:

Communications Biology, 2021, v. 4, n. 1, p. 1, doi. 10.1038/s42003-021-01855-2

By:

Pandey, Krishan K.;
Bera, Sibes;
Shi, Ke;
Rau, Michael J.;
Oleru, Amarachi V.;
Fitzpatrick, James A. J.;
Engelman, Alan N.;
Aihara, Hideki;
Grandgenett, Duane P.

Publication type:

Article

Atypical teratoid/rhabdoid tumor with retained INI1 (SMARCB1) expression and loss of BRG1 (SMARCA4).

Published in:

Neuropathology, 2018, v. 38, n. 3, p. 305, doi. 10.1111/neup.12452

By:

Bookhout, Christine;
Bouldin, Thomas W.;
Ellison, David W.

Publication type:

Article

Variable orthogonality of serine integrase interactions within the ϕC31 family.

Published in:

Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-77570-9

By:

MacDonald, Alasdair I.;
Baksh, Aron;
Holland, Alexandria;
Shin, Heewhan;
Rice, Phoebe A.;
Stark, W. Marshall;
Olorunniji, Femi J.

Publication type:

Article

THAP9 Transposase Cleaves DNA via Conserved Acidic Residues in an RNaseH-Like Domain.

Published in:

Cells (2073-4409), 2021, v. 10, n. 6, p. 1351, doi. 10.3390/cells10061351

By:

Sharma, Vasudha;
Thakore, Prachi;
Majumdar, Sharmistha

Publication type:

Article

Raltegravir-Induced Adaptations of the HIV-1 Integrase: Analysis of Structure, Variability, and Mutation Co-occurrence.

Published in:

Frontiers in Microbiology, 2019, p. 1, doi. 10.3389/fmicb.2019.01981

By:

Machado, Lucas de Almeida;
Gomes, Marcelo Ferreira da Costa;
Guimarães, Ana Carolina Ramos

Publication type:

Article

Optimizing approaches for targeted integration of transgenic cassettes by integrase-mediated cassette exchange in mouse and human stem cells.

Published in:

Stem Cells, 2025, v. 43, n. 1, p. 1, doi. 10.1093/stmcls/sxae092

By:

Rath, Phalguni;
Kramer, Philipp;
Biggs, Daniel;
Preece, Chris;
Hortin, Nicole;
Diaz, Rebeca;
Perez-Alcantara, Marta;
Li, Xiang;
Bolard, Arnaud;
Beer, Nicola;
McCarthy, Mark;
Davies, Benjamin

Publication type:

Article

PhiC31 Integrase Induces Efficient Site-Specific Recombination in the Capra hircus Genome.

Published in:

DNA & Cell Biology, 2014, v. 33, n. 8, p. 484, doi. 10.1089/dna.2013.2124

By:

Ma, Haiyan;
Ma, Qingwen;
Lu, Yao;
Wang, Juan;
Hu, Wei;
Gong, Zhijuan;
Cai, Linlin;
Huang, Ying;
Huang, Shu-Zhen;
Zeng, Fanyi

Publication type:

Article

Adjusting the attB Site in Donor Plasmid Improves the Efficiency of ΦC31 Integrase System.

Published in:

DNA & Cell Biology, 2012, v. 31, n. 7, p. 1335, doi. 10.1089/dna.2011.1590

By:

Xie, Fei;
Ma, Qingwen;
Jiang, Shizhong;
Ren, Zhaorui;
Wang, Juan;
Huang, Shuzhen;
Zeng, Fanyi;
Zeng, Yitao

Publication type:

Article

Site-specific bacterial chromosome engineering mediated by IntA integrase from Rhizobium etli.

Published in:

BMC Microbiology, 2016, v. 16, p. 1, doi. 10.1186/s12866-016-0755-y

By:

Hernández-Tamayo, Rogelio;
Torres-Tejerizo, Gonzalo;
Brom, Susana;
Romero, David

Publication type:

Article

Integrating vectors for genetic studies in the rare Actinomycete Amycolatopsis marina.

Published in:

BMC Biotechnology, 2019, v. 19, n. 1, p. N.PAG, doi. 10.1186/s12896-019-0521-y

By:

Gao, Hong;
Murugesan, Buvani;
Hoßbach, Janina;
Evans, Stephanie K.;
Stark, W. Marshall;
Smith, Margaret C. M.

Publication type:

Article

Comparison and optimization of ten phage encoded serine integrases for genome engineering in Saccharomyces cerevisiae.

Published in:

BMC Biotechnology, 2016, v. 16, p. 1, doi. 10.1186/s12896-016-0241-5

By:

Zhengyao Xu;
Brown, William R. A.

Publication type:

Article

Analysis of <italic>Vibrio</italic> seventh pandemic island II and novel genomic islands in relation to attachment sequences among a wide variety of <italic>Vibrio cholerae</italic> strains.

Published in:

Microbiology & Immunology, 2018, v. 62, n. 3, p. 150, doi. 10.1111/1348-0421.12570

By:

Nguyen, Tuan Hai;
Pham, Tho Duc;
Higa, Naomi;
Iwashita, Hanako;
Takemura, Taichiro;
Ohnishi, Makoto;
Morita, Kouichi;
Yamashiro, Tetsu

Publication type:

Article

A Role for the Budding Yeast Separase, Esp1, in Ty1 Element Retrotransposition.

Published in:

PLoS Genetics, 2015, v. 11, n. 3, p. 1, doi. 10.1371/journal.pgen.1005109

By:

Ho, Krystina L.;
Ma, Lina;
Cheung, Stephanie;
Manhas, Savrina;
Fang, Nancy;
Wang, Kaiqian;
Young, Barry;
Loewen, Christopher;
Mayor, Thibault;
Measday, Vivien

Publication type:

Article

MicroRNA expression in SMARCB1/INI1-deficient sinonasal carcinoma: a clinicopathological and molecular genetic study.

Published in:

2018

By:

Laco, Jan;
Kovaříková, Helena;
Chmelařová, Marcela;
Vošmiková, Hana;
Sieglová, Kateřina;
Baranová, Ivana;
Dundr, Pavel;
Němejcová, Kristýna;
Michálek, Jaroslav;
Šatanková, Jana;
Vošmik, Milan;
Ryška, Aleš

Publication type:

journal article

Horses naturally infected with EIAV harbor 2 distinct SU populations but are monophyletic with respect to IN.

Published in:

Virus Genes, 2016, v. 52, n. 1, p. 71, doi. 10.1007/s11262-015-1280-z

By:

Cervantes, Diana;
Ball, Judith;
Edwards, John;
Payne, Susan

Publication type:

Article

HIV-1 B-subtype capsid protein: a characterization of amino acid's conservation and its significant association with integrase signatures.

Published in:

Virus Genes, 2014, v. 48, n. 3, p. 429, doi. 10.1007/s11262-014-1039-y

By:

Dimonte, Salvatore;
Babakir-Mina, Muhammed;
Aquaro, Stefano

Publication type:

Article

The Mobilome of Carbapenem-Resistant Klebsiella pneumoniae Clinical Isolates.

Published in:

Russian Journal of Genetics, 2020, v. 56, n. 3, p. 280, doi. 10.1134/S1022795420030035

By:

Alekseeva, A. E.;
Brusnigina, N. F.;
Gordinskaya, N. A.

Publication type:

Article

A New Bacteriophage Pseudomonas Phage Ka1 from a Tributary Stream of Lake Baikal.

Published in:

Microbiology (00262617), 2024, v. 93, n. 4, p. 507, doi. 10.31857/s0026365624040126

By:

Fedorova, M. S.;
Gatina, A. E.;
Ilyina, V. N.;
Yadykova, L. L.;
Drukker, V. V.;
Gorshkova, A. S.;
Kayumov, A. R.;
Trizna, E. Y.

Publication type:

Article

Positioning Diverse Type IV Structures and Functions Within Class 1 CRISPR-Cas Systems.

Published in:

Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.671522

By:

Taylor, Hannah N.;
Laderman, Eric;
Armbrust, Matt;
Hallmark, Thomson;
Keiser, Dylan;
Bondy-Denomy, Joseph;
Jackson, Ryan N.

Publication type:

Article

PhiC31-based Site-Specific Transgenesis System for Production of Transgenic Bovine Embryos by Somatic Cell Nuclear Transfer and Intracytoplasmic Sperm Injection.

Published in:

Cell Journal (Yakhteh), 2018, v. 20, n. 1, p. 98, doi. 10.22074/cellj.2018.4385.

By:

Hadi Sekhavati, Mohammad;
Hosseini, Sayed Morteza;
Tahmoorespur, Mojtaba;
Ghaedi, Kamran;
Jafarpour, Farnoosh;
Hajian, Mehdi;
Dormiani, Kyanoosh;
Nasr-Esfahani, Mohammad Hossain

Publication type:

Article

Use of Integrase-Minus Lentiviral Vector for Transient Expression.

Published in:

Cell Journal (Yakhteh), 2012, v. 14, n. 2, p. 76

By:

Farazmandfar, Touraj;
Shahreza, Hossein Khanahmad;
Haghshenas, Mohammad Reza;
Janbabai, Ghasem;
Azadeh, Hossein;
Samaei, Nader Mansour

Publication type:

Article

Anti-HIV-1 Activity of Ellagic acid Isolated from Terminalia paniculata.

Published in:

Free Radicals & Antioxidants, 2016, v. 6, n. 1, p. 101, doi. 10.5530/fra.2016.1.12

By:

Narayan L., Chaitra;
Rai V., Ravishankar

Publication type:

Article

Cellular Cofactors of Lentiviral Integrase: From Target Validation to Drug Discovery.

Published in:

Molecular Biology International, 2012, p. 1, doi. 10.1155/2012/863405

By:

Taltynov, Oliver;
Desimmie, Belete A.;
Demeulemeester, Jonas;
Christ, Frauke;
Debyser, Zeger

Publication type:

Article

Two Lineages of Pseudomonas aeruginosa Filamentous Phages: Structural Uniformity over Integration Preferences.

Published in:

Genome Biology & Evolution, 2020, v. 12, n. 10, p. 1765, doi. 10.1093/gbe/evaa146

By:

Fiedoruk, Krzysztof;
Zakrzewska, Magdalena;
Daniluk, Tamara;
Piktel, Ewelina;
Chmielewska, Sylwia;
Bucki, Robert

Publication type:

Article

Recent Mobility of Casposons, Self-Synthesizing Transposons at the Origin of the CRISPR-Cas Immunity.

Published in:

Genome Biology & Evolution, 2016, v. 8, n. 2, p. 375, doi. 10.1093/gbe/evw006

By:

Krupovic, Mart;
Shmakov, Sergey;
Makarova, Kira S.;
Forterre, Patrick;
Koonin, Eugene V.

Publication type:

Article

Antibacterial and anti-HIV-1 integrase properties of isolated compounds from Boesenbergia kingii.

Published in:

Songklanakarin Journal of Science & Technology, 2017, v. 39, n. 1, p. 131

By:

Sudsai, Teeratad;
Leajae, Sukanlaya;
Dangmanee, Nattakan;
Chatgat, Wasapon;
Chaniad, Prapaporn;
Tewtrakul, Supinya

Publication type:

Article

Anti-HIV-1 integrase activity of compounds from Cassia garrettiana heartwood.

Published in:

Songklanakarin Journal of Science & Technology, 2013, v. 35, n. 6, p. 665

By:

Kingkan Bunluepuech;
Chatchai Wattanapiromsakul;
Supinya Tewtrakul

Publication type:

Article

Anti-HIV-1 integrase and anti-allergic activities of Bauhinia strychnifolia.

Published in:

Songklanakarin Journal of Science & Technology, 2013, v. 35, n. 6, p. 659

By:

Kingkan Bunluepuech;
Chatchai Wattanapiromsakul;
Fameera Madaka;
Supinya Tewtrakul

Publication type:

Article

Hot Spots of Site-Specific Integration into the Sinorhizobium meliloti Chromosome.

Published in:

International Journal of Molecular Sciences, 2024, v. 25, n. 19, p. 10421, doi. 10.3390/ijms251910421

By:

Vladimirova, Maria E.;
Roumiantseva, Marina L.;
Saksaganskaia, Alla S.;
Muntyan, Victoria S.;
Gaponov, Sergey P.;
Mengoni, Alessio

Publication type:

Article

The Development, Optimization and Future of Prime Editing.

Published in:

International Journal of Molecular Sciences, 2023, v. 24, n. 23, p. 17045, doi. 10.3390/ijms242317045

By:

Petrova, Irina O.;
Smirnikhina, Svetlana A.

Publication type:

Article

Genetic Analysis of HIV-1 Integrase Sequences from Treatment Naive Individuals in Northeastern South Africa.

Published in:

International Journal of Molecular Sciences, 2013, v. 14, n. 3, p. 5013, doi. 10.3390/ijms14035013

By:

Bessong, Pascal Obong;
Nwobegahay, Julius

Publication type:

Article

Usefulness of Integrase resistance testing in proviral HIV-1 DNA in patients with Raltegravir prior failure.

Published in:

2016

By:

Fernández-Caballero, Jose Ángel;
Chueca, Natalia;
Álvarez, Marta;
Mérida, María Dolores;
López, Josefa;
Sánchez, José Antonio;
Vinuesa, David;
Martínez, María Ángeles;
Hernández, José;
García, Federico

Publication type:

journal article

Screening of potential pseudo att sites of Streptomyces phage ΦC31 integrase in the human genome.

Published in:

Acta Pharmacologica Sinica, 2013, v. 34, n. 4, p. 561, doi. 10.1038/aps.2012.173

By:

Hu, Zhi-peng;
Chen, Lu-sheng;
Jia, Cai-yan;
Zhu, Huan-zhang;
Wang, Wei;
Zhong, Jiang

Publication type:

Article

The 156KELK159 tetrapeptide of HIV-1 integrase is critical for lentiviral gene integration.

Published in:

Molecular Biology Reports, 2012, v. 39, n. 1, p. 343, doi. 10.1007/s11033-011-0744-z

By:

Li, Wen-juan;
Huang, Lu;
Zhang, Jian-qi;
Xu, Guan-lan;
Tian, Ling;
Xue, Jing-lun;
Chen, Jin-zhong;
Jia, William

Publication type:

Article

Recombinant rabbit single-chain antibodies bind to the catalytic and C-terminal domains of HIV-1 integrase protein and strongly inhibit HIV-1 replication.

Published in:

Biotechnology & Applied Biochemistry, 2012, v. 59, n. 5, p. 353, doi. 10.1002/bab.1034

By:

da Silva, Frederico Aires;
Li, Min;
Rato, Sylvie;
Maia, Sara;
Malhó, Rui;
Warren, Kylie;
Harrich, David;
Craigie, Robert;
Barbas, Carlos;
Goncalves, Joao

Publication type:

Article

Primary and promiscuous functions coexist during evolutionary innovation through whole protein domain acquisitions.

Published in:

eLife, 2021, p. 1, doi. 10.7554/eLife.58061

By:

Escudero, José Antonio;
Nivina, Aleksandra;
Kemble, Harry E.;
Loot, Céline;
Tenaillon, Olivier;
Mazel, Didier

Publication type:

Article

Prophage Integrase Typing Is a Useful Indicator of Genomic Diversity in Salmonella enterica.

Published in:

Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.01283

By:

Colavecchio, Anna;
D'Souza, Yasmin;
Tompkins, Elizabeth;
Jeukens, Julie;
Freschi, Luca;
Emond-Rheault, Jean-Guillaume;
Kukavica-Ibrulj, Irena;
Boyle, Brian;
Bekal, Sadjia;
Tamber, Sandeep;
Levesque, Roger C.;
Goodridge, Lawrence D.

Publication type:

Article

IS21 family transposase cleaved donor complex traps two right-handed superhelical crossings.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-38071-x

By:

Spínola-Amilibia, Mercedes;
Araújo-Bazán, Lidia;
de la Gándara, Álvaro;
Berger, James M.;
Arias-Palomo, Ernesto

Publication type:

Article