Works matching DE "HISTONE genetics"

Results: 189

The value of new high-throughput technologies for diagnosis and prognosis in solid tumors.

Published in:

Cancer Biomarkers, 2014, v. 14, n. 2, p. 103, doi. 10.3233/CBM-130328

By:

Pinto, Rosamaria;
De Summa, Simona;
Petriella, Daniela;
Tudoran, Oana;
Danza, Katia;
Tommasi, Stefania

Publication type:

Article

Rapid induction of alternative lengthening of telomeres by depletion of the histone chaperone ASF1.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 2, p. 167, doi. 10.1038/nsmb.2754

By:

O'Sullivan, Roderick J;
Arnoult, Nausica;
Lackner, Daniel H;
Oganesian, Liana;
Haggblom, Candy;
Corpet, Armelle;
Almouzni, Genevieve;
Karlseder, Jan

Publication type:

Article

H2B Tyr37 phosphorylation suppresses expression of replication-dependent core histone genes.

Published in:

Nature Structural & Molecular Biology, 2012, v. 19, n. 9, p. 930, doi. 10.1038/nsmb.2356

By:

Mahajan, Kiran;
Fang, Bin;
Koomen, John M;
Mahajan, Nupam P

Publication type:

Article

Chromatin remodelers Isw1 and Chd1 maintain chromatin structure during transcription by preventing histone exchange.

Published in:

Nature Structural & Molecular Biology, 2012, v. 19, n. 9, p. 884, doi. 10.1038/nsmb.2312

By:

Smolle, Michaela;
Venkatesh, Swaminathan;
Gogol, Madelaine M;
Li, Hua;
Zhang, Ying;
Florens, Laurence;
Washburn, Michael P;
Workman, Jerry L

Publication type:

Article

Fully-mature antral mouse oocytes are transcriptionally silent but their heterochromatin maintains a transcriptional permissive histone acetylation profile.

Published in:

Journal of Assisted Reproduction & Genetics, 2011, v. 28, n. 12, p. 1193, doi. 10.1007/s10815-011-9562-4

By:

Zuccotti, Maurizio;
Bellone, Michele;
Longo, Frank;
Redi, Carlo;
Garagna, Silvia

Publication type:

Article

4-Acyl Pyrroles: Mimicking Acetylated Lysines in Histone Code Reading.

Published in:

Angewandte Chemie, 2013, v. 125, n. 52, p. 14305, doi. 10.1002/ange.201307652

By:

Lucas, Xavier;
Wohlwend, Daniel;
Hügle, Martin;
Schmidtkunz, Karin;
Gerhardt, Stefan;
Schüle, Roland;
Jung, Manfred;
Einsle, Oliver;
Günther, Stefan

Publication type:

Article

Germ line-limited and somatic chromosomes of Acricotopus lucidus differ in distribution and timing of alterations of histone modifications in male gonial mitosis and meiosis.

Published in:

Chromosome Research, 2012, v. 20, n. 6, p. 717, doi. 10.1007/s10577-012-9308-x

By:

Staiber, Wolfgang

Publication type:

Article

StereoGene: rapid estimation of genome-wide correlation of continuous or interval feature data.

Published in:

Bioinformatics, 2017, v. 33, n. 20, p. 3158, doi. 10.1093/bioinformatics/btx379

By:

Stavrovskaya, Elena D.;
Niranjan, Tejasvi;
Fertig, Elana J.;
Wheelan, Sarah J.;
Favorov, Alexander V.;
Mironov, Andrey A.

Publication type:

Article

hiHMM: Bayesian non-parametric joint inference of chromatin state maps.

Published in:

Bioinformatics, 2015, v. 31, n. 13, p. 2066, doi. 10.1093/bioinformatics/btv117

By:

Kyung-Ah Sohn;
Ho, Joshua W. K.;
Djordjevic, Djordje;
Hyun-hwan Jeong;
Park, Peter J.;
Ju Han Kim

Publication type:

Article

WiggleTools: parallel processing of large collections of genome-wide datasets for visualization and statistical analysis.

Published in:

Bioinformatics, 2014, v. 30, n. 7, p. 1008, doi. 10.1093/bioinformatics/btt737

By:

Zerbino, Daniel R.;
Johnson, Nathan;
Juettemann, Thomas;
Wilder, Steven P.;
Flicek, Paul

Publication type:

Article

Epigenetics: Histones pass the message on.

Published in:

Nature Reviews Genetics, 2015, v. 16, n. 1, p. 3, doi. 10.1038/nrg3876

By:

Jones, Bryony

Publication type:

Article

Distinctive patterns of epigenetic marks are associated with promoter regions of mouse LINE-1 and LTR retrotransposons.

Published in:

Mobile DNA, 2013, v. 4, n. 1, p. 2, doi. 10.1186/1759-8753-4-27

By:

Rangasamy, Danny

Publication type:

Article

Making Sense of the Tangle: Insights into Chromatin Folding and Gene Regulation.

Published in:

Genes, 2016, v. 7, n. 10, p. 71, doi. 10.3390/genes7100071

By:

Ill-Min Chung;
Ketharnathan, Sarada;
Seung-Hyun Kim;
Thiruvengadam, Muthu;
Rani, Mari Kavitha;
Rajakumar, Govindasamy

Publication type:

Article

Chromatin Dynamics in Vivo: A Game of Musical Chairs.

Published in:

Genes, 2015, v. 6, n. 3, p. 751, doi. 10.3390/genes6030751

By:

Melters, Daniël P.;
Nye, Jonathan;
Haiqing Zhao;
Yamini Dalal

Publication type:

Article

Chromatin remodelers: We are the drivers!!

Published in:

Nucleus (1949-1034), 2016, v. 7, n. 4, p. 388, doi. 10.1080/19491034.2016.1211217

By:

Tyagi, Monica;
Imam, Nasir;
Verma, Kirtika;
Patel, Ashok K.

Publication type:

Article

Structural analysis of an active fungal PRC2.

Published in:

Nucleus (1949-1034), 2016, v. 7, n. 3, p. 284, doi. 10.1080/19491034.2016.1183849

By:

Jiao, Lianying;
Liu, Xin

Publication type:

Article

Distinct features of lamin A-interacting chromatin domains mapped by ChIP-sequencing from sonicated or micrococcal nuclease-digested chromatin.

Published in:

Nucleus (1949-1034), 2015, v. 6, n. 1, p. 30, doi. 10.4161/19491034.2014.990855

By:

Lund, Eivind G;
Duband-Goulet, Isabelle;
Oldenburg, Anja;
Buendia, Brigitte;
Collas, Philippe

Publication type:

Article

Drosophila Symplekin localizes dynamically to the histone locus body and tricellular junctions.

Published in:

Nucleus (1949-1034), 2014, v. 5, n. 6, p. 613, doi. 10.4161/19491034.2014.990860

By:

Tatomer, Deirdre C;
Rizzardi, Lindsay F;
Curry, Kaitlin P;
Witkowski, Alison M;
Marzluff, William F;
Duronio, Robert J

Publication type:

Article

Cancer-fighting Smurf.

Published in:

Nature Medicine, 2012, v. 18, n. 2, p. 204, doi. 10.1038/nm.2655

By:

Wang, Xi;
Roberts, Charles W M

Publication type:

Article

Absence of canonical marks of active chromatin in developmentally regulated genes.

Published in:

Nature Genetics, 2015, v. 47, n. 10, p. 1158, doi. 10.1038/ng.3381

By:

Pérez-Lluch, Sílvia;
Blanco, Enrique;
Tilgner, Hagen;
Curado, Joao;
Ruiz-Romero, Marina;
Corominas, Montserrat;
Guigó, Roderic

Publication type:

Article

The genomic landscape of high hyperdiploid childhood acute lymphoblastic leukemia.

Published in:

Nature Genetics, 2015, v. 47, n. 6, p. 672, doi. 10.1038/ng.3301

By:

Paulsson, Kajsa;
Lilljebjörn, Henrik;
Biloglav, Andrea;
Olsson, Linda;
Rissler, Marianne;
Castor, Anders;
Barbany, Gisela;
Nordgren, Ann;
Fogelstrand, Linda;
Sjögren, Helene;
Fioretos, Thoas;
Johansson, Bertil

Publication type:

Article

Genetic landscape of esophageal squamous cell carcinoma.

Published in:

Nature Genetics, 2014, v. 46, n. 10, p. 1097, doi. 10.1038/ng.3076

By:

Gao, Yi-Bo;
Chen, Zhao-Li;
Li, Jia-Gen;
Hu, Xue-Da;
Shi, Xue-Jiao;
Sun, Zeng-Miao;
Zhang, Fan;
Liu, Zi-Yuan;
Zhao, Yu-Da;
Sun, Jian;
Zhou, Cheng-Cheng;
Yao, Ran;
Wang, Su-Ya;
Sun, Nan;
Zhang, Bai-Hua;
Dong, Jing-Si;
Yu, Yue;
Luo, Mei;
Zhou, Fang;
Tan, Feng-Wei

Publication type:

Article

Large conserved domains of low DNA methylation maintained by Dnmt3a.

Published in:

Nature Genetics, 2014, v. 46, n. 1, p. 17, doi. 10.1038/ng.2836

By:

Jeong, Mira;
Sun, Deqiang;
Luo, Min;
Huang, Yun;
Challen, Grant A;
Rodriguez, Benjamin;
Zhang, Xiaotian;
Chavez, Lukas;
Wang, Hui;
Hannah, Rebecca;
Kim, Sang-Bae;
Yang, Liubin;
Ko, Myunggon;
Chen, Rui;
Göttgens, Berthold;
Lee, Ju-Seog;
Gunaratne, Preethi;
Godley, Lucy A;
Darlington, Gretchen J;
Rao, Anjana

Publication type:

Article

Characterization of genome-wide H3K27ac profiles reveals a distinct PM2.5-associated histone modification signature.

Published in:

Environmental Health: A Global Access Science Source, 2015, v. 14, n. 1, p. 1, doi. 10.1186/s12940-015-0052-5

By:

Cong Liu;
Junhui Xu;
Yahong Chen;
Xinbiao Guo;
Yinan Zheng;
Qianfei Wang;
Yiyong Chen;
Yang Ni;
Yidan Zhu;
Joyce, Brian Thomas;
Baccarelli, Andrea;
Furong Deng;
Wei Zhang;
Lifang Hou

Publication type:

Article

Epigenetic regulation of MDR1 gene through posttranslational histone modifications in prostate cancer.

Published in:

BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-898

By:

Henrique, Rui;
Oliveira, Ana Isabel;
Costa, Vera L.;
Baptista, Tiago;
Martins, Ana Teresa;
Morais, António;
Oliveira, Jorge;
Jerónimo, Carmen

Publication type:

Article

iASeq: integrative analysis of allele-specificity of protein-DNA interactions in multiple ChIP-seq datasets.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-681

By:

Yingying Wei;
Xia Li;
Qian-fei Wang;
Hongkai Ji

Publication type:

Article

Prediction of RNA Polymerase II recruitment, elongation and stalling from histone modification data.

Published in:: BMC Genomics, 2011, v. 12, n. Suppl 2, p. 544, doi. 10.1186/1471-2164-12-544
Publication type:: Article

Cytogenetic Mapping of H1 Histone and Ribosomal RNA Genes in Hybrids between Catfish Species Pseudoplatystoma corruscans and Pseudoplatystoma reticulatum.

Published in:

Cytogenetic & Genome Research, 2013, v. 139, n. 2, p. 102, doi. 10.1159/000345299

By:

Hashimoto, D.T.;
Ferguson-Smith, M.a.;
Rens, W.;
Prado, F.D.;
Foresti, F.;
Porto-Foresti, F.

Publication type:

Article

Approach to the Investigation of Nucleosome Structure by Using the Highly Emissive Nucleobase thdG–tC FRET Pair.

Published in:

Chemistry - A European Journal, 2018, v. 24, n. 64, p. 17091, doi. 10.1002/chem.201803382

By:

Han, Ji Hoon;
Park, Soyoung;
Hashiya, Fumitaka;
Sugiyama, Hiroshi

Publication type:

Article

Prognostic value of histone marks H3K27me3 and H3K9me3 and modifying enzymes EZH2, SETDB1 and LSD-1 in colorectal cancer.

Published in:

Journal of Cancer Research & Clinical Oncology, 2018, v. 144, n. 11, p. 2127, doi. 10.1007/s00432-018-2733-2

By:

Carvalho, Sónia;
Freitas, Micaela;
Antunes, Luís;
Monteiro-Reis, Sara;
Vieira-Coimbra, Marcia;
Tavares, Ana;
Paulino, Sofia;
Videira, José Flávio;
Jerónimo, Carmen;
Henrique, Rui

Publication type:

Article

Non-canonical Cajal bodies form in the nucleus of late stage avian oocytes lacking functional nucleolus.

Published in:

Histochemistry & Cell Biology, 2012, v. 138, n. 1, p. 57, doi. 10.1007/s00418-012-0938-z

By:

Khodyuchenko, Tatiana;
Gaginskaya, Elena;
Krasikova, Alla

Publication type:

Article

Histone H1 couples initiation and amplification of ubiquitin signalling after DNA damage.

Published in:

Nature, 2015, v. 527, n. 7578, p. 389, doi. 10.1038/nature15401

By:

Thorslund, Tina;
Ripplinger, Anita;
Hoffmann, Saskia;
Wild, Thomas;
Uckelmann, Michael;
Villumsen, Bine;
Narita, Takeo;
Sixma, Titia K.;
Choudhary, Chunaram;
Bekker-Jensen, Simon;
Mailand, Niels

Publication type:

Article

Cytoplasmic protein methylation is essential for neural crest migration.

Published in:

Journal of Cell Biology, 2014, v. 204, n. 1, p. 95, doi. 10.1083/jcb.201306071

By:

Vermillion, Katie L.;
Lidberg, Kevin A.;
Gamm, Laura S.

Publication type:

Article

RNAseq by Total RNA Library Identifies Additional RNAs Compared to Poly(A) RNA Library.

Published in:

BioMed Research International, 2015, v. 2015, p. 1, doi. 10.1155/2015/862130

By:

Guo, Yan;
Zhao, Shilin;
Sheng, Quanhu;
Guo, Mingsheng;
Lehmann, Brian;
Pietenpol, Jennifer;
Samuels, David C.;
Shyr, Yu

Publication type:

Article

Stepping inside the realm of epigenetic modifiers.

Published in:

Biomolecular Concepts, 2015, v. 6, n. 2, p. 119, doi. 10.1515/bmc-2015-0008

By:

Blum, Roy

Publication type:

Article

H3K27me1 is essential for MMP-9-dependent H3N-terminal tail proteolysis during osteoclastogenesis.

Published in:

Epigenetics & Chromatin, 2018, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13072-018-0193-1

By:

Kim, Kyunghwan;
Shin, Yonghwan;
Kim, Jinman;
Ulmer, Tobias S.;
An, Woojin

Publication type:

Article

Tissue-specific expression of histone H3 variants diversified after species separation.

Published in:

Epigenetics & Chromatin, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s13072-015-0027-3

By:

Kazumitsu Maehara;
Akihito Harada;
Yuko Sato;
Masaki Matsumoto;
Keiichi I. Nakayama;
Hiroshi Kimura;
Yasuyuki Ohkawa

Publication type:

Article

The complex pattern of epigenomic variation between natural yeast strains at single-nucleosome resolution.

Published in:

Epigenetics & Chromatin, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s13072-015-0019-3

By:

Filleton, Fabien;
Chuffart, Florent;
Nagarajan, Muniyandi;
Bottin-Duplus, Hélène;
Yvert, Gaël

Publication type:

Article

A role for the histone chaperone DAXX in the structural organization of heterochromatin.

Published in:

2013

By:

Rapkin, Lindsy M.;
Ahmed, Kashif;
Ren Li;
Bazett-Jones, David P.

Publication type:

Conference Paper/Materials

Thermodynamic insights into histone transfer among chaperones.

Published in:

2013

By:

Liu, Wallace H.;
Roemer, Sarah C.;
Port, Alex M.;
Churchill, Mair E. A.

Publication type:

Conference Paper/Materials

Centromere-specific histone Cse4 by the chaperone Scm3.

Published in:

2013

By:

Cho, Uhn-Soo;
Harrison, Stephen C.

Publication type:

Conference Paper/Materials

Increased macroH2A1.1 Expression Correlates with Poor Survival of Triple-Negative Breast Cancer Patients.

Published in:

PLoS ONE, 2014, v. 9, n. 6, p. 1, doi. 10.1371/journal.pone.0098930

By:

Lavigne, Anne-Claire;
Castells, Magali;
Mermet, Jérôme;
Kocanova, Silvia;
Dalvai, Mathieu;
Bystricky, Kerstin

Publication type:

Article

Characterization of Centromeric Histone H3 (CENH3) Variants in Cultivated and Wild Carrots (Daucus sp.).

Published in:

PLoS ONE, 2014, v. 9, n. 6, p. 1, doi. 10.1371/journal.pone.0098504

By:

Dunemann, Frank;
Schrader, Otto;
Budahn, Holger;
Houben, Andreas

Publication type:

Article

Oncogenic Features of PHF8 Histone Demethylase in Esophageal Squamous Cell Carcinoma.

Published in:

PLoS ONE, 2013, v. 8, n. 10, p. 1, doi. 10.1371/journal.pone.0077353

By:

Sun, Xiujing;
Qiu, Jihui Julia;
Zhu, Shengtao;
Cao, Bangwei;
Sun, Lin;
Li, Sen;
Li, Peng;
Zhang, Shutian;
Dong, Shuo

Publication type:

Article

The Transcriptional Cofactor MCAF1/ATF7IP Is Involved in Histone Gene Expression and Cellular Senescence.

Published in:

PLoS ONE, 2013, v. 8, n. 7, p. 1, doi. 10.1371/journal.pone.0068478

By:

Sasai, Nobuhiro;
Saitoh, Noriko;
Saitoh, Hisato;
Nakao, Mitsuyoshi

Publication type:

Article

A Subset of Histone H2B Genes Produces Polyadenylated mRNAs under a Variety of Cellular Conditions

Published in:

PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0063745

By:

Kari, Vijayalakshmi;
Karpiuk, Oleksandra;
Tieg, Bettina;
Kriegs, Malte;
Dikomey, Ekkehard;
Krebber, Heike;
Begus-Nahrmann, Yvonne;
Johnsen, Steven A.

Publication type:

Article

Transcriptomic Sequencing Reveals a Set of Unique Genes Activated by Butyrate-Induced Histone Modification.

Published in:

Gene Regulation & Systems Biology, 2016, n. 10, p. 1, doi. 10.4137/GRSB.S35607

By:

Cong-Jun Li;
Li, Robert W.;
Baldwin VI, Ransom L.;
Blomberg, Le Ann;
Sitao Wu;
Weizhong Li

Publication type:

Article

Butyrate Induced IGF2 Activation Correlated with Distinct Chromatin Signatures Due to Histone Modification.

Published in:

Gene Regulation & Systems Biology, 2013, n. 7, p. 57, doi. 10.4137/GRSB.S11243

By:

Joo Heon Shin;
Robert W. Li;
Yuan Gao;
Bickhart, Derek M.;
Liu, George E.;
Weizhong Li;
Sitao Wu;
Cong-jun Li

Publication type:

Article

Genetic contributions to intergroup responses: a cautionary perspective.

Published in:

2012

By:

Ratner, Kyle G.;
Kubota, Jennifer T.

Publication type:

Opinion

Protein arginine hypomethylation in a mouse model of cystathionine β-synthase deficiency.

Published in:

FASEB Journal, 2014, v. 28, n. 6, p. 2686, doi. 10.1096/fj.13-246579

By:

Esse, Ruben;
Imbard, Apolline;
Florindo, Cristina;
Gupta, Sapna;
Quinlivan, Eoin P.;
Davids, Mariska;
Teerlink, Tom;
de Almeida, Isabel Tavares;
Kruger, Warren D.;
Blom, Henk J.;
Castro, Rita

Publication type:

Article