Works about HAPLOTYPES

Results: 5000

Novel molecular data for diplozoids reveal similar mitochondrial and ribosomal phylogenies, unexpected geographical structure, and intra-individual mito-nuclear incompatibilities Open Access.

Published in:

Zoological Journal of the Linnean Society, 2025, v. 203, n. 4, p. 1, doi. 10.1093/zoolinnean/zlaf021

By:

Benovics, Michal;
Šimková, Andrea;
Papežík, Petr;
Křížová, Kristína Civáňová;
Ondračková, Markéta;
Zach, Martin;
Seifertová, Mária

Publication type:

Article

Phylogeography of Korean field mouse Apodemus peninsulae (Rodentia: Muridae): an update Free.

Published in:

Zoological Journal of the Linnean Society, 2025, v. 203, n. 4, p. 1, doi. 10.1093/zoolinnean/zlae016

By:

Chelomina, Galina N;
Meschersky, Ilya G;
Gajduchenko, Helen;
Borisov, Yuri M

Publication type:

Article

Shared neoantigens' atlas for off-the-shelf cancer vaccine development.

Published in:

Journal of Translational Medicine, 2025, v. 23, n. 1, p. 1, doi. 10.1186/s12967-025-06478-3

By:

Mauriello, Angela;
Cavalluzzo, Beatrice;
Ragone, Concetta;
Tagliamonte, Maria;
Buonaguro, Luigi

Publication type:

Article

Haplotype-resolved chromosome-level genome sequence of Elsholtzia splendens (Nakai ex F.Maek.).

Published in:

Scientific Data, 2025, v. 12, n. 1, p. 1, doi. 10.1038/s41597-025-05214-2

By:

Moon, Sung Jin;
Lee, Sae Hyun;
Sim, Woo Hyun;
Choi, Han Suk;
Lee, Ju Seok;
Shim, Sangrea

Publication type:

Article

Haplotype-resolved chromosomal-level genome assembly of Prunus mahaleb.

Published in:

Scientific Data, 2025, v. 12, n. 1, p. 1, doi. 10.1038/s41597-025-04873-5

By:

Fu, Chenlong;
Li, Meng;
Zhao, Zhuang;
Yu, Lixia;
Wang, Xianrong;
Hou, Zhuangwei;
Wang, Zefu

Publication type:

Article

Identification of octopus species and genetic structure of Octopus insularis in the western Atlantic.

Published in:

Aquatic Ecology, 2025, v. 59, n. 2, p. 577, doi. 10.1007/s10452-025-10181-2

By:

Sánchez-López, Levita Irene;
Villegas-Sánchez, Carmen Amelia;
Jarquín-González, Jani;
Rosas-Luis, Rigoberto;
Leite, Tatiana S.

Publication type:

Article

Rewilding shows differential fitness of sympatric Physella acuta (Draparnaud, 1805) snail lineages.

Published in:

Aquatic Ecology, 2025, v. 59, n. 2, p. 435, doi. 10.1007/s10452-025-10172-3

By:

McQuirk, Kevin A.;
DeCore, Juliana M.;
Castillo, Maria G.;
Adema, Coen M.

Publication type:

Article

Molecular Characterization and Phylogenetic Analysis of Flea Species in Human and Livestock Residence by Targeting ITS2 Region in East Azerbaijan Province, Iran.

Published in:

Journal of Arthropod-Borne Diseases, 2024, v. 18, n. 3, p. 180, doi. 10.18502/jad.v18i3.18571

By:

Farmani, Mostafa;
Spotin, Adel;
Dolatkhah, Afsaneh;
Gholizadeh, Saber;
Hazratian, Teimour

Publication type:

Article

Sawfish: improving long-read structural variant discovery and genotyping with local haplotype modeling Open Access.

Published in:

Bioinformatics, 2025, v. 41, n. 4, p. 1, doi. 10.1093/bioinformatics/btaf136

By:

Saunders, Christopher T;
Holt, James M;
Baker, Daniel N;
Lake, Juniper A;
Belyeu, Jonathan R;
Kronenberg, Zev;
Rowell, William J;
Eberle, Michael A

Publication type:

Article

Integrating RNA-Seq and linkage mapping to identify and characterize qESCT2 , a cold tolerance QTL at the early seedling stage in rice.

Published in:

Frontiers in Plant Science, 2025, p. 1, doi. 10.3389/fpls.2025.1580022

By:

Liu, Wenqiang;
Chen, Zuwu;
Guo, Liang;
Dong, Zheng;
Yang, Biaoren;
Liu, Licheng;
Liu, Sanxiong;
Pan, Xiaowu

Publication type:

Article

Genomic Signatures of Positive Selection and Local Adaptation in Ethiopian Sheep Populations.

Published in:

Tropical Animal Science Journal, 2025, v. 48, n. 3, p. 179, doi. 10.5398/tasj.2025.48.3.179

By:

Demissie, B. E.;
Tarekegn, G. M.;
Dadia, H.;
Edea, Z.;
Woldesemayat, A. A.;
Kim, K.-S.;
Girma, S.;
Seyoum, T.;
Melaku, K.;
Keskes, S.

Publication type:

Article

Variability of mitochondrial DNA control region in the Adriatic populations of European sardine Sardina pilchardus (Walbaum 1792).

Published in:

Journal of Central European Agriculture, 2025, v. 26, n. 1, p. 76, doi. 10.5513/JCEA01/26.1.4503

By:

TOMLJANOVIĆ, Tea;
REZIĆ, Andrea;
MATULIĆ, Daniel;
POPOVIĆ, Natalija TOPIĆ;
ČOŽ-RAKOVAC, Rozelindra;
LOVRINOV, Mario;
STRUNJAK-PEROVIĆ, Ivančica

Publication type:

Article

Characterizing differences in the muscle transcriptome between cattle with alternative LCORL-NCAPG haplotypes.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11665-z

By:

Rodrigues, Fernanda Martins;
Majeres, Leif E.;
Dilger, Anna C.;
McCann, Joshua C.;
Cassady, Christopher J.;
Shike, Dan W.;
Beever, Jonathan E.

Publication type:

Article

Insights into the Genetic Connectivity and Climate-Driven Northward Range Expansion of Turbo sazae (Gastropoda: Turbinidae) Along the Eastern Coast of Korea.

Published in:

Animals (2076-2615), 2025, v. 15, n. 9, p. 1321, doi. 10.3390/ani15091321

By:

Cho, Young-Ghan;
Kwon, Kyungman;
Rho, Hyun Soo;
Min, Won-Gi;
Jeung, Hee-Do;
Hwang, Un-Ki;
Ryu, Yong-Kyun;
Park, Areumi;
Hong, Hyun-Ki;
Shin, Jong-Seop;
Yang, Hyun-Sung

Publication type:

Article

Whole Genome Insights into Genetic Diversity, Introgression, and Adaptation of Hunan Cattle.

Published in:

Animals (2076-2615), 2025, v. 15, n. 9, p. 1287, doi. 10.3390/ani15091287

By:

Li, Yushan;
Li, Jianbo;
Duan, Hongfeng;
Sun, Ao;
Hu, Renke;
Gao, Shuai;
Zhang, Baizhong;
Huang, Bizhi;
Lei, Chuzhao;
Yi, Kangle

Publication type:

Article

A Novel Allelic Variant of OsAGPL2 Influences Rice Eating and Cooking Quality.

Published in:

Cells (2073-4409), 2025, v. 14, n. 9, p. 634, doi. 10.3390/cells14090634

By:

Dan, Yuqing;
Huang, Fudeng;
Xu, Junfeng;
He, Yong;
Peng, Ruixiao;
Li, Chunshou;
Song, Jiayu;
Hao, Yuanyuan;
Tian, Zhihong

Publication type:

Article

Single-Nucleotide Polymorphisms of BRCA1 and BRCA2 and Risk of Papillary Thyroid Carcinoma.

Published in:

Cancers, 2025, v. 17, n. 9, p. 1456, doi. 10.3390/cancers17091456

By:

Song, Chang Myeon;
Kim, Yun Jin;
Cheong, Hyun Sub;
Ji, Yong Bae;
Tae, Kyung

Publication type:

Article

Utilizing Long-Read Sequencing for Haplotype Construction and Prevention of Autosomal Dominant Polycystic Kidney Disease Transmission in Mosaicism Family.

Published in:

DNA & Cell Biology, 2025, v. 44, n. 5, p. 238, doi. 10.1089/dna.2024.0280

By:

Zubo, Wu;
Liu, Jie;
Liu, Yi;
Wang, Xiaoli;
Shu, Defeng

Publication type:

Article

Genetic diversity and novel haplotypes of Apis mellifera jemenitica on the Arabian Peninsula: insights from mtDNA markers.

Published in:

Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1532988

By:

Alsharhi, Mohammed;
Al-Ghamdi, Ahmad;
Al-Garadi, Maged Ahmed;
Alburaki, Mohamed

Publication type:

Article

Variation at the major facilitator superfamily ZIFL1 gene influences zinc concentration of barley grain.

Published in:

Frontiers in Plant Science, 2025, p. 1, doi. 10.3389/fpls.2025.1539029

By:

Dinsa, Girma Fana;
Russell, Joanne;
Steffenson, Brian;
Halpin, Claire;
Waugh, Robbie

Publication type:

Article

早期描述物种的模式标定及基因组解析：以中国第一个被描述的真菌新种五棱散尾鬼笔为例.

Published in:

Mycosystema, 2025, v. 44, n. 4, p. 1, doi. 10.13346/j.mycosystema.240296

By:

梁俊敏;
王科;
杜卓;
赵明君;
蔡磊;
戴玉成

Publication type:

Article

Genetic diversity and population structure of Gracilaria flabelliformis (Gracilariaceae, Rhodophyta) in the Mexican Atlantic based on the RuBisCo spacer region.

Published in:

Journal of Applied Phycology, 2025, v. 37, n. 2, p. 1509, doi. 10.1007/s10811-025-03457-5

By:

Cuevas Sánchez, Estefany;
Núñez Resendiz, María Luisa;
Dreckmann, Kurt M.;
Hernández, Oscar E.;
Sentíes, Abel

Publication type:

Article

Unique demographic history and population substructure among the Coorgs of Southern India.

Published in:

Communications Biology, 2025, v. 8, n. 1, p. 1, doi. 10.1038/s42003-025-08073-0

By:

Mukhopadhyay, Anirban;
Kumar, Lomous;
Sran, Kiran;
Thangaraj, Kumarasamy;
Thelma, B. K.

Publication type:

Article

Intronomics-MIP: a snakemake pipeline for analyzing multilocus intron polymorphisms in species identification and population genomics.

Published in:

BMC Research Notes, 2025, v. 18, n. 1, p. 1, doi. 10.1186/s13104-025-07264-6

By:

Scapolatiello, A.;
Boscari, E.;
Schiavon, L.;
Vitulo, N.;
Congiu, L.

Publication type:

Article

HTLV-1 Japanese subgroup in Brazil: phylogenetic and migratory history.

Published in:

Retrovirology, 2025, v. 22, n. 1, p. 1, doi. 10.1186/s12977-025-00663-4

By:

Amianti, Carolina;
Bandeira, Larissa Melo;
Lorenz, Aline Pedroso;
Tanaka, Tayana Serpa Ortiz;
Domingos, João Américo;
de Castro, Ana Rita Coimbra Motta

Publication type:

Article

Temporal Patterns of Haplotypic and Allelic Diversity Reflect the Changing Selection Landscape of the Malaria Parasite Plasmodium falciparum.

Published in:

Molecular Biology & Evolution, 2025, v. 42, n. 4, p. 1, doi. 10.1093/molbev/msaf075

By:

Early, Angela M;
Pelleau, Stéphane;
Musset, Lise;
Neafsey, Daniel E

Publication type:

Article

Phylogeography of the bobwhite ( Colinus) quails.

Published in:

Wildlife Monographs, 2016, v. 193, n. 1, p. 1, doi. 10.1002/wmon.1017

By:

Williford, Damon;
Deyoung, Randy W.;
Honeycutt, Rodney L.;
Brennan, Leonard A.;
Hernández, Fidel

Publication type:

Article

Isoëtes viridimontana: A Previously Unrecognized Quillwort from Vermont, USA.

Published in:

American Fern Journal, 2014, v. 104, n. 1, p. 7, doi. 10.1640/0002-8444-104.1.7

By:

Rosenthal, Michael A.;
Rosenthal, Sharon R.;
Johnson, Gabriel;
Taylor, W . Carl;
Zimmer, Elizabeth A.

Publication type:

Article

Genome-Wide Analysis of the World's Sheep Breeds Reveals High Levels of Historic Mixture and Strong Recent Selection.

Published in:

PLoS Biology, 2012, v. 10, n. 2, p. 1, doi. 10.1371/journal.pbio.1001258

By:

Kijas, James W.;
Lenstra, Johannes A.;
Hayes, Ben;
Boitard, Simon;
Porto Neto, Laercio R.;
San Cristobal, Magali;
Servin, Bertrand;
McCulloch, Russell;
Whan, Vicki;
Gietzen, Kimberly;
Paiva, Samuel;
Barendse, William;
Ciani, Elena;
Raadsma, Herman;
McEwan, John;
Dalrymple, Brian

Publication type:

Article

Recombination Hotspots and Population Structure in Plasmodium falciparum.

Published in:

PLoS Biology, 2005, v. 3, n. 9, p. 1, doi. 10.1371/journal.pbio.0030335

By:

Mu, Jianbing;
Awadalla, Philip;
Duan, Junhui;
McGee, Kate M;
Joy, Deirdre A;
McVean, Gilean A. T;
Su, Xin-zhuan

Publication type:

Article

New multilocus linkage disequilibrium measure for tag SNP selection.

Published in:

Journal of Bioinformatics & Computational Biology, 2017, v. 15, n. 1, p. -1, doi. 10.1142/S0219720017500019

By:

Liao, Bo;
Wang, Xiangjun;
Zhu, Wen;
Li, Xiong;
Cai, Lijun;
Chen, Haowen

Publication type:

Article

Ehapp2: Estimate haplotype frequencies from pooled sequencing data with prior database information.

Published in:

Journal of Bioinformatics & Computational Biology, 2016, v. 14, n. 4, p. -1, doi. 10.1142/S0219720016500177

By:

Cao, Chang-Chang;
Sun, Xiao

Publication type:

Article

An improved preprocessing algorithm for haplotype inference by pure parsimony.

Published in:

Journal of Bioinformatics & Computational Biology, 2014, v. 12, n. 4, p. 1, doi. 10.1142/S0219720014500206

By:

Mun-Ho Choi;
Seung-Ho Kang;
Hyeong-Seok Lim

Publication type:

Article

A FAST AND ACCURATE ALGORITHM FOR DIPLOID INDIVIDUAL HAPLOTYPE RECONSTRUCTION.

Published in:

Journal of Bioinformatics & Computational Biology, 2013, v. 11, n. 4, p. -1, doi. 10.1142/S0219720013500108

By:

WU, JINGLI;
LIANG, BINBIN

Publication type:

Article

WHOLE GENOME IDENTITY-BY-DESCENT DETERMINATION.

Published in:

Journal of Bioinformatics & Computational Biology, 2013, v. 11, n. 2, p. 1, doi. 10.1142/S0219720013500029

By:

SABAA, HADI;
CAI, ZHIPENG;
YINING WANG;
GOEBEL, RANDY;
MOORE, STEPHEN;
LIN, GUOHUI

Publication type:

Article

INCREASING POWER BY USING HAPLOTYPE SIMILARITY IN A MULTIMARKER TRANSMISSION/DISEQUILIBRIUM TEST.

Published in:

Journal of Bioinformatics & Computational Biology, 2013, v. 11, n. 2, p. 1, doi. 10.1142/S021972001250014X

By:

ABAD-GRAU, MARÍA M.;
MEDINA-MEDINA, NURIA;
MORAL, SERAFÍN;
MONTES-SOLDADO, ROSANA;
TORRES-SÁNCHEZ, SERGIO;
MATESANZ, FUENCISLA

Publication type:

Article

INFERRING HAPLOTYPES FROM GENOTYPES ON A PEDIGREE WITH MUTATIONS, GENOTYPING ERRORS AND MISSING ALLELES.

Published in:

Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 2, p. 339, doi. 10.1142/S0219720011005549

By:

WANG, WEI-BUNG;
JIANG, TAO

Publication type:

Article

Exploring quantitative trait loci for anthocyanin content in interspecific hybrid grape ( Vitis labruscana × Vitis vinifera).

Published in:

Euphytica, 2014, v. 198, n. 1, p. 101, doi. 10.1007/s10681-014-1087-3

By:

Ban, Yusuke;
Mitani, Nobuhito;
Hayashi, Takeshi;
Sato, Akihiko;
Azuma, Akifumi;
Kono, Atsushi;
Kobayashi, Shozo

Publication type:

Article

S-genotyping of sweet cherry varieties from Spain and S-locus diversity in Europe.

Published in:

Euphytica, 2014, v. 197, n. 2, p. 229, doi. 10.1007/s10681-014-1061-0

By:

Cachi, Ariana;
Wünsch, Ana

Publication type:

Article

Isolation and characterization of Viviparous- 1 haplotypes in wheat related species.

Published in:

Euphytica, 2012, v. 188, n. 1, p. 71, doi. 10.1007/s10681-012-0659-3

By:

Sun, Y.;
Yang, Y.;
Shewry, P.;
Jones, H.;
Xia, L.

Publication type:

Article

Genetic diversity of Egeria densa Planch. (Hydrocharitaceae) in Brazilian reservoirs.

Published in:

Aquatic Ecology, 2024, v. 58, n. 3, p. 707, doi. 10.1007/s10452-024-10100-x

By:

Lucio, Léia Carolina;
Scorsim, Bárbara;
da Silva, Adrian Cesar;
de Oliveira, Alessandra Valéria;
Thomaz, Sidinei Magela;
Prioli, Sônia Maria Alves Pinto;
Prioli, Alberto José

Publication type:

Article

The first molecular characterization of the genus Hirudo on the territory of Serbia: estimation of endangerment.

Published in:

Aquatic Ecology, 2015, v. 49, n. 1, p. 81, doi. 10.1007/s10452-015-9506-7

By:

Živić, Ivana;
Radosavljević, Tijana;
Stojanović, Katarina;
Petrović, Andjeljko

Publication type:

Article

Genetic Evidence for Colletotrichum gloeosporioides Transmission Between the Invasive Plant Ageratina adenophora and Co-occurring Neighbor Plants.

Published in:

Microbial Ecology, 2023, v. 86, n. 3, p. 2192, doi. 10.1007/s00248-023-02237-3

By:

Zeng, ZhaoYing;
Yang, ZhiPing;
Yang, AiLing;
Li, YuXuan;
Zhang, HanBo

Publication type:

Article

Bee Trypanosomatids: First Steps in the Analysis of the Genetic Variation and Population Structure of Lotmaria passim, Crithidia bombi and Crithidia mellificae.

Published in:

Microbial Ecology, 2022, v. 84, n. 3, p. 856, doi. 10.1007/s00248-021-01882-w

By:

Bartolomé, Carolina;
Buendía-Abad, María;
Ornosa, Concepción;
De la Rúa, Pilar;
Martín-Hernández, Raquel;
Higes, Mariano;
Maside, Xulio

Publication type:

Article

Ecological Contacts and Host Specificity Promote Replacement of Nutritional Endosymbionts in Ticks.

Published in:

Microbial Ecology, 2022, v. 83, n. 3, p. 776, doi. 10.1007/s00248-021-01773-0

By:

Buysse, Marie;
Binetruy, Florian;
Leibson, Raz;
Gottlieb, Yuval;
Duron, Olivier

Publication type:

Article

Genetic Diversity of Cryphonectria hypovirus 1, a Biocontrol Agent of Chestnut Blight, in Croatia and Slovenia.

Published in:

Microbial Ecology, 2020, v. 79, n. 1, p. 148, doi. 10.1007/s00248-019-01377-9

By:

Krstin, Ljiljana;
Katanić, Zorana;
Repar, Jelena;
Ježić, Marin;
Kobaš, Ana;
Ćurković-Perica, Mirna

Publication type:

Article

Epidemic Spread of Symbiotic and Non-Symbiotic Bradyrhizobium Genotypes Across California.

Published in:

Microbial Ecology, 2016, v. 71, n. 3, p. 700, doi. 10.1007/s00248-015-0685-5

By:

Hollowell, A.;
Regus, J.;
Gano, K.;
Bantay, R.;
Centeno, D.;
Pham, J.;
Lyu, J.Y.;
Moore, D.;
Bernardo, A.;
Lopez, G.;
Patil, A.;
Patel, S.;
Lii, Y.;
Sachs, J.

Publication type:

Article

Plasma urotensin-2 level and Thr21Met but not Ser89Asn polymorphisms of the urotensin-2 gene are associated with migraines.

Published in:

Journal of Headache & Pain, 2016, v. 17, n. 1, p. 1, doi. 10.1186/s10194-016-0623-z

By:

Geyik, Sırma;
Ergun, Sercan;
Kuzudişli, Samiye;
Şensoy, Figen;
Temiz, Ebru;
Altunışık, Erman;
Korkmaz, Murat;
Dağlı, Hasan;
Kul, Seval;
Akçalı, Aylin;
Neyal, Ayşe

Publication type:

Article

Promoter haplotypes of the corticotropin-releasing hormone encoding gene modulate the physiological stress response in vitro and in vivo.

Published in:

2019

By:

Li-Tempel, Ting;
Suer, Tobias;
Tempel, Tobias;
Larra, Mauro F.;
Winnikes, Ulrike;
Schächinger, Hartmut;
Meyer, Jobst;
Schote, Andrea B.

Publication type:

Report

Genetic linkage of UGT1A7 and UGT1A9 polymorphisms to UGT1A1*6 is associated with reduced activity for SN-38 in Japanese patients with cancer.

Published in:

2007

By:

Fujita, Ken-ichi;
Ando, Yuichi;
Nagashima, Fumio;
Yamamoto, Wataru;
Eodo, Hisashi;
Araki, Kazuhiro;
Kodama, Keiji;
Miya, Toshimichi;
Narabayashi, Masaru;
Sasaki, Yasutsuna

Publication type:

journal article