Works matching DE "GENOME walking"

Results: 42

Development of event-specific qualitative and quantitative PCR detection methods for the transgenic maize BVLA430101.

Published in:

European Food Research & Technology, 2016, v. 242, n. 8, p. 1277, doi. 10.1007/s00217-015-2631-7

By:

Rao, Jun;
Yang, Litao;
Guo, Jinchao;
Quan, Sheng;
Chen, Guihua;
Zhao, Xiangxiang;
Zhang, Dabing;
Shi, Jianxin

Publication type:

Article

Molecular Detection of TYLCV Isolates from Xinjiang Autonomous Region of China and Analysis of Its DNA-A Genome Sequences.

Published in:

Plant Diseases & Pests, 2013, v. 4, n. 6, p. 1

By:

Ding Yingna;
Li Shifang;
Zhang Sheng;
Cui Yuanyu;
Yang Hua;
He Wei;
Sun Xiaojun

Publication type:

Article

Isolation of Mitochondrial Control Region for White-nest Swiftlets (Aerodramus fuciphagus) Using Primer Walking Techniques.

Published in:

Pertanika Journal of Tropical Agricultural Science, 2013, v. 36, n. 2, p. 115

By:

Goh, W. L.;
Lim, C. K.;
Rahman, M. A.

Publication type:

Article

Faster, safer, and better DNA purification by ultracentrifugation using GelRed stain and development of mismatch oligo DNA for genome walking.

Published in:

Bioscience, Biotechnology & Biochemistry, 2014, v. 78, n. 11, p. 1902, doi. 10.1080/09168451.2014.940831

By:

Ichiro Kasajima;
Norihiro Ohtsubo;
Katsutomo Sasaki

Publication type:

Article

Identification of a seed maturation protein gene from Coffea arabica (CaSMP) and analysis of its promoter activity in tomato.

Published in:

Plant Cell Reports, 2018, v. 37, n. 9, p. 1257, doi. 10.1007/s00299-018-2310-9

By:

Quintero, Fabíola OCampo;
Pinto, Layra G.;
Barsalobres-Cavallari, Carla F.;
Arcuri, Mariana de Lara Campos;
Pino, Lilian Ellen;
Peres, Lázaro Eustáquio Pereira;
Maluf, Mirian P.;
Maia, Ivan G.

Publication type:

Article

A PCR-RFLP Assay targeting RPS8 gene for the discrimination between bovine Babesia and Theileria species in China.

Published in:

Parasites & Vectors, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s13071-015-1085-x

By:

Zhancheng Tian;
Junzheng Du;
Jifei Yang;
Aihong Liu;
Xiaocui Liu;
Guangyuan Liu;
Hong Yin

Publication type:

Article

iSVP: an integrated structural variant calling pipeline from high-throughput sequencing data.

Published in:

BMC Systems Biology, 2013, v. 7, p. 1, doi. 10.1186/1752-0509-7-S6-S8

By:

Takahiro Mimori;
Naoki Nariai;
Kaname Kojima;
Mamoru Takahashi;
Akira Ono;
Yukuto Sato;
Yumi Yamaguchi-Kabata;
Masao Nagasaki

Publication type:

Article

Expansion of the HSFY gene family in pig lineages.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1650-x

By:

Skinner, Benjamin M.;
Lachani, Kim;
Sargent, Carole A.;
Fengtang Yang;
Ellis, Peter;
Hunt, Toby;
Beiyuan Fu;
Louzada, Sandra;
Churcher, Carol;
Tyler-Smith, Chris;
Affara, Nabeel A.

Publication type:

Article

CGGBP1 mitigates cytosine methylation at repetitive DNA sequences.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1593-2

By:

Agarwal, Prasoon;
Collier, Paul;
Fritz, Markus Hsi-Yang;
Benes, Vladimir;
Wiklund, Helena Jernberg;
Westermark, Bengt;
Singh, Umashankar

Publication type:

Article

Genome sequences of a capulavirus infecting Plantago lanceolata in the Åland archipelago of Finland.

Published in:

2017

By:

Susi, Hanna;
Laine, Anna-Liisa;
Filloux, Denis;
Kraberger, Simona;
Farkas, Kata;
Bernardo, Pauline;
Frilander, Mikko;
Martin, Darren;
Varsani, Arvind;
Roumagnac, Philippe

Publication type:

Report

High Expression Level of mok E Enhances the Production of Monacolin K in Monascus.

Published in:

Food Biotechnology, 2018, v. 32, n. 1, p. 35, doi. 10.1080/08905436.2017.1413985

By:

Lin, Lin;
Wu, Shufen;
Li, Zhenjing;
Ren, Zhiyuan;
Chen, Mianhua;
Wang, Changlu

Publication type:

Article

Editorial: Marching Toward 100% Whole Genome Sequencing.

Published in:

Frontiers in Genetics, 2016, p. 1, doi. 10.3389/fgene.2016.00041

By:

Yih-Horng Shiao

Publication type:

Article

VarGenius executes cohort-level DNA-seq variant calling and annotation and allows to manage the resulting data through a PostgreSQL database.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12859-018-2532-4

By:

Musacchia, F.;
Ciolfi, A.;
Mutarelli, M.;
Bruselles, A.;
Castello, R.;
Pinelli, M.;
Basu, S.;
Banfi, S.;
Casari, G.;
Tartaglia, M.;
Nigro, V.

Publication type:

Article

A statistical framework for detecting mislabeled and contaminated samples using shallow-depth sequence data.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12859-018-2512-8

By:

Chan, Ariel W.;
Williams, Amy L.;
Jannink, Jean-Luc

Publication type:

Article

From one to six: unrecognized species diversity in the genus Acantholichen (lichenized Basidiomycota: Hygrophoraceae.

Published in:

Mycologia, 2016, v. 108, n. 1, p. 38, doi. 10.3852/15-060

By:

Dal-Forno, Manuela;
Lücking, Robert;
Bungartz, Frank;
Yánez-Ayabaca, Alba;
Marcelli, Marcelo P.;
Spielmann, Adriano A.;
Fernando Coca, Luis;
Luis Chaves, Josá;
Aptroot, Andre;
Sipman, Harrie J. M.;
Patrick Gillevet, Masoumeh Sikaroodi;
Lawrey, James D.

Publication type:

Article

Identification of a functional antioxidant responsive element in the promoter of the Chinese hamster carbonyl reductase 3 ( Chcr3) gene.

Published in:

Cell Biology International, 2015, v. 39, n. 7, p. 808, doi. 10.1002/cbin.10450

By:

Miura, Takeshi;
Taketomi, Ayako;
Nakabayashi, Toshikatsu;
Nishinaka, Toru;
Terada, Tomoyuki

Publication type:

Article

Characterization of a gene regulating antibiotic production in <italic>Bacillus subtilis</italic> BSD-2.

Published in:

Biotechnology & Biotechnological Equipment, 2018, v. 32, n. 2, p. 332, doi. 10.1080/13102818.2017.1329633

By:

Liu, Hongwei;
Fan, Xing;
Cheng, Huicai;
Yin, Shuli;
Zhang, Genwei;
Xi, Yanhua;
An, Likang;
Zhang, Liping

Publication type:

Article

A novel KRT71 variant in curly‐coated dogs.

Published in:

Animal Genetics, 2019, v. 50, n. 1, p. 101, doi. 10.1111/age.12746

By:

Salmela, E.;
Niskanen, J.;
Arumilli, M.;
Donner, J.;
Lohi, H.;
Hytönen, M. K.

Publication type:

Article

Isolation and Characterization of DBR2 Gene Promoter from Iranian Artemisia annua.

Published in:

Journal of Agricultural Science & Technology, 2014, v. 16, n. 1, p. 191

By:

Sarvestani, R.;
Peyghambary, S. A.;
Abbasi, A.

Publication type:

Article

Ice bucket challenge bears fruit for amyotrophic lateral sclerosis.

Published in:

Journal of Neurology, 2016, v. 263, n. 11, p. 2355, doi. 10.1007/s00415-016-8297-7

By:

Hrastelj, James;
Robertson, Neil

Publication type:

Article

Study of triplet periodicity differences inside and between genomes.

Published in:

Statistical Applications in Genetics & Molecular Biology, 2015, v. 14, n. 2, p. 113, doi. 10.1515/sagmb-2013-0063

By:

Suvorova, Yulia M.;
Korotkov, Eugene V.

Publication type:

Article

H-CLAP: hierarchical clustering within a linear array with an application in genetics.

Published in:

Statistical Applications in Genetics & Molecular Biology, 2015, v. 14, n. 2, p. 125, doi. 10.1515/sagmb-2013-0076

By:

Ghosh, Samiran;
Townsend, Jeffrey P.

Publication type:

Article

Automation of PacBio SMRTbell NGS library preparation for bacterial genome sequencing.

Published in:

Standards in Genomic Sciences, 2017, v. 12, p. 1, doi. 10.1186/s40793-017-0239-1

By:

Nguyet Kong;
Ng, Whitney;
Kao Thao;
Agulto, Regina;
Weis, Allison;
Spittle Kim, Kristi;
Korlach, Jonas;
Hickey, Luke;
Kelly, Lenore;
Lappin, Stephen;
Weimer, Bart C.

Publication type:

Article

Lessons from genome skimming of arthropod-preserving ethanol.

Published in:

Molecular Ecology Resources, 2016, v. 16, n. 6, p. 1365, doi. 10.1111/1755-0998.12539

By:

Linard, B.;
Arribas, P.;
Andújar, C.;
Crampton ‐ Platt, A.;
Vogler, A. P.

Publication type:

Article

Sequence Capture versus Restriction Site Associated DNA Sequencing for Shallow Systematics.

Published in:

Systematic Biology, 2016, v. 65, n. 5, p. 910, doi. 10.1093/sysbio/syw036

By:

HARVEY, MICHAEL G.;
SMITH, BRIAN TILSTON;
GLENN, TRAVIS C.;
FAIRCLOTH, BRANT C.;
BRUMFIELD, ROBB T.

Publication type:

Article

A defining decade in DNA sequencing.

Published in:

Nature Methods, 2014, v. 11, n. 10, p. 1003, doi. 10.1038/nmeth.3106

By:

McPherson, John D

Publication type:

Article

Draft genome sequence of Staphylococcus sp. EZ-P03 isolated from a mesophilic anaerobic digester.

Published in:

BMC Research Notes, 2018, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13104-018-3784-9

By:

Ziganshina, Elvira E.;
Mohammed, Waleed S.;
Shagimardanova, Elena I.;
Shigapova, Leyla H.;
Ziganshin, Ayrat M.

Publication type:

Article

In search of perfect reads.

Published in:

BMC Bioinformatics, 2015, v. 16, p. 1, doi. 10.1186/1471-2105-16-S17-S7

By:

Pal, Soumitra;
Aluru, Srinivas

Publication type:

Article

SMRT sequencing only de novo assembly of the sugar beet (Beta vulgaris) chloroplast genome.

Published in:

BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0726-6

By:

Stadermann, Kai Bernd;
Weisshaar, Bernd;
Holtgräwe, Daniela

Publication type:

Article

popSTR: population-scale detection of STR variants.

Published in:

Bioinformatics, 2017, v. 33, n. 24, p. 4041, doi. 10.1093/bioinformatics/btw568

By:

Kristmundsdóttir, Snædís;
Sigurpálsdóttir, Brynja D.;
Kehr, Birte;
Halldórsson, Bjarni V.

Publication type:

Article

RUCS: rapid identification of PCR primers for unique core sequences.

Published in:

Bioinformatics, 2017, v. 33, n. 24, p. 3917, doi. 10.1093/bioinformatics/btx526

By:

Thomsen, Martin Christen Frølund;
Hasman, Henrik;
Westh, Henrik;
Kaya, Hülya;
Lund, Ole

Publication type:

Article

ReliableGenome: annotation of genomic regions with high/low variant calling concordance.

Published in:

Bioinformatics, 2017, v. 33, n. 2, p. 155, doi. 10.1093/bioinformatics/btw587

By:

Popitsch, Niko;
Schuh, Anna;
Taylor, Jenny C.

Publication type:

Article

Linear and exponential TAIL-PCR: a method for efficient and quick amplification of flanking sequences adjacent to Tn5 transposon insertion sites.

Published in:

AMB Express, 2017, v. 7, n. 1, p. 1, doi. 10.1186/s13568-017-0495-x

By:

Jia, Xianbo;
Lin, Xinjian;
Chen, Jichen

Publication type:

Article

MOLECULAR CHARACTERIZATION OF POTATO VIRUS Y INDUCING POTATO TUBER NECROTIC RINGSPOT DISEASE IN SERBIA.

Published in:

Genetika (0534-0012), 2016, v. 48, n. 2, p. 487, doi. 10.2298/GENSR1602487R

By:

RISTIC, Danijela;
VUCUROVIC, Ivan;
KUZMANOVIC, Slobodan;
MILOSEVIC, Drago;
GASIC, Katarina;
DOLOVAC, Nenad;
STAROVIC, Mira

Publication type:

Article

Next-generation sequencing-based genome diagnostics across clinical genetics centers: implementation choices and their effects.

Published in:

European Journal of Human Genetics, 2015, v. 23, n. 9, p. 1142, doi. 10.1038/ejhg.2014.279

By:

Vrijenhoek, Terry;
Kraaijeveld, Ken;
Elferink, Martin;
de Ligt, Joep;
Kranendonk, Elcke;
Santen, Gijs;
Nijman, Isaac J;
Butler, Derek;
Claes, Godelieve;
Costessi, Adalberto;
Dorlijn, Wim;
van Eyndhoven, Winfried;
Halley, Dicky J J;
van den Hout, Mirjam C G N;
van Hove, Steven;
Johansson, Lennart F;
Jongbloed, Jan D H;
Kamps, Rick;
Kockx, Christel E M;
de Koning, Bart

Publication type:

Article

More data than you can imagine.

Published in:

EE: Evaluation Engineering, 2015, v. 54, n. 5, p. 20

By:

Lecklider, Tom

Publication type:

Article

Age-Related Alterations in DNA Methylation and APETALA2 (AP2) Levels in Herbaceous Peony (Paeonia lactiflora Pall.).

Published in:

Phyton (0031-9457), 2022, v. 91, n. 9, p. 2005, doi. 10.32604/phyton.2022.021062

By:

Yanqing Wu;
Jiao Liu;
Yuhan Tang;
Daqiu Zhao;
Jun Tao

Publication type:

Article

Molecular Cloning and Structure-Function Analysis of a Trypsin Inhibitor from Tartary Buckwheat and Its Application in Combating Phytopathogenic Fungi.

Published in:

Agronomy, 2018, v. 8, n. 4, p. 46, doi. 10.3390/agronomy8040046

By:

Jing-jun Ruan;
Shan-jun Tian;
Jun Yan;
Hui Chen;
Ru-hong Xu;
Jian-ping Cheng

Publication type:

Article

Partially Overlapping Primer-Based PCR for Genome Walking.

Published in:

PLoS ONE, 2015, v. 10, n. 3, p. 1, doi. 10.1371/journal.pone.0120139

By:

Li, Haixing;
Ding, Dongqin;
Cao, Yusheng;
Yu, Bo;
Guo, Liang;
Liu, Xiaohua

Publication type:

Article

Genetic diversity of three classes of integrons in antibiotic-resistant bacteria isolated from Jiulong River in southern China.

Published in:

Environmental Science & Pollution Research, 2015, v. 22, n. 15, p. 11930, doi. 10.1007/s11356-015-4480-0

By:

Lin, Mao;
Liang, Jingjing;
Zhang, Xian;
Wu, Xiaomei;
Yan, Qingpi;
Luo, Zhuanxi

Publication type:

Article

Identification of micro RNAs and their mRNA targets during soybean nodule development: functional analysis of the role of miR393j-3p in soybean nodulation.

Published in:

New Phytologist, 2015, v. 207, n. 3, p. 748, doi. 10.1111/nph.13365

By:

Yan, Zhe;
Hossain, Md Shakhawat;
Arikit, Siwaret;
Valdés‐López, Oswaldo;
Zhai, Jixian;
Wang, Jun;
Libault, Marc;
Ji, Tieming;
Qiu, Lijuan;
Meyers, Blake C.;
Stacey, Gary

Publication type:

Article

Sequence Mutations of Genes Pertaining to Malignancy in Cancer.

Published in:

Journal of Data Science, 2013, v. 11, n. 4, p. 673

By:

Nardnisa Sintupisut;
Chen-Hsiang Yeang

Publication type:

Article