Works matching DE "GENOME statistics"

Results: 35

Consistent Positive Co-Variation between Fluctuating Asymmetry and Sexual Trait Size: A Challenge to the Developmental Instability-Sexual Selection Hypothesis.

Published in:

Symmetry (20738994), 2015, v. 7, n. 2, p. 976, doi. 10.3390/sym7020976

By:

Polak, Michal;
Hooker, Kassie J.;
Tyler, Frances

Publication type:

Article

Experimental Evolution of Escherichia coli Harboring an Ancient Translation Protein.

Published in:

Journal of Molecular Evolution, 2017, v. 84, n. 2/3, p. 69, doi. 10.1007/s00239-017-9781-0

By:

Kacar, Betül;
Ge, Xueliang;
Sanyal, Suparna;
Gaucher, Eric

Publication type:

Article

Causal associations between risk factors and common diseases inferred from GWAS summary data.

Published in:

Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-017-02317-2

By:

Zhihong Zhu;
Futao Zhang;
Yang Wu;
Trzaskowski, Maciej;
Maier, Robert;
Robinson, Matthew R.;
Zhili Zheng;
Visscher, Peter M.;
Wray, Naomi R.;
Jian Yang;
McGrath, John J.

Publication type:

Article

The first genome sequence of a metatherian herpesvirus: Macropodid herpesvirus 1.

Published in:

BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2390-2

By:

Vaz, Paola K.;
Mahony, Timothy J.;
Hartley, Carol A.;
Fowler, Elizabeth V.;
Ficorilli, Nino;
Lee, Sang W.;
Gilkerson, James R.;
Browning, Glenn F.;
Devlin, Joanne M.

Publication type:

Article

Concatenated alignments and the case of the disappearing tree.

Published in:

BMC Evolutionary Biology, 2014, v. 14, n. 1, p. 1, doi. 10.1186/s12862-014-0266-0

By:

Thiergart, Thorsten;
Landan, Giddy;
Martin, William F.

Publication type:

Article

ShinyGPAS: interactive genomic prediction accuracy simulator based on deterministic formulas.

Published in:

Genetics Selection Evolution, 2017, v. 49, p. 1, doi. 10.1186/s12711-017-0368-4

By:

Morota, Gota

Publication type:

Article

Genomic variance estimates: With or without disequilibrium covariances?

Published in:

Journal of Animal Breeding & Genetics, 2017, v. 134, n. 3, p. 232, doi. 10.1111/jbg.12268

By:

Lehermeier, C.;
Campos, G.;
Wimmer, V.;
Schön, C.‐C.

Publication type:

Article

Beyond genomic selection: The animal model strikes back (one generation)!

Published in:

Journal of Animal Breeding & Genetics, 2017, v. 134, n. 3, p. 224, doi. 10.1111/jbg.12271

By:

Cantet, R.J.C.;
García‐Baccino, C.A.;
Rogberg‐Muñoz, A.;
Forneris, N.S.;
Munilla, S.

Publication type:

Article

Interplay between heritability, genetic correlation and economic weighting in a selection index with and without genomic information.

Published in:

Journal of Animal Breeding & Genetics, 2013, v. 130, n. 6, p. 456, doi. 10.1111/jbg.12051

By:

Haberland, A.M.;
Pimentel, E.C.G.;
Ytournel, F.;
Erbe, M.;
Simianer, H.

Publication type:

Article

Statistical modelling of CG interdistance across multiple organisms.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 10, p. 299, doi. 10.1186/s12859-018-2303-2

By:

A., Merlotti;
Valle I., Faria do;
G., Castellani;
D., Remondini

Publication type:

Article

Evolution of CG Methylation Maintenance Machinery in Plants.

Published in:

Epigenomes, 2021, v. 5, n. 3, p. 1, doi. 10.3390/epigenomes5030019

By:

Tirot, Louis;
Jullien, Pauline E.;
Ingouff, Mathieu

Publication type:

Article

A Novel and Fast Approach for Population Structure Inference Using Kernel-PCA and Optimization.

Published in:

Genetics, 2014, v. 198, n. 4, p. 1421, doi. 10.1534/genetics.114.171314

By:

Popescu, Andrei-Alin;
Harper, Andrea L.;
Trick, Martin;
Bancroft, Ian;
Huber, Katharina T.

Publication type:

Article

Controlling false discoveries in genome scans for selection.

Published in:

Molecular Ecology, 2016, v. 25, n. 2, p. 454, doi. 10.1111/mec.13513

By:

François, Olivier;
Martins, Helena;
Caye, Kevin;
Schoville, Sean D.

Publication type:

Article

Translatome profiling: methods for genome-scale analysis of mRNA translation.

Published in:

Briefings in Functional Genomics, 2016, v. 15, n. 1, p. 22, doi. 10.1093/bfgp/elu045

By:

King, Helen A.;
Gerber, André P.

Publication type:

Article

Genome-wide identification and analysis of the ALTERNATIVE OXIDASE gene family in diploid and hexaploid wheat.

Published in:

PLoS ONE, 2018, v. 13, n. 8, p. 1, doi. 10.1371/journal.pone.0201439

By:

Brew-Appiah, Rhoda A. T.;
York, Zara B.;
Krishnan, Vandhana;
Roalson, Eric H.;
Sanguinet, Karen A.

Publication type:

Article

Biology challenging statistics.

Published in:

Statistical Applications in Genetics & Molecular Biology, 2018, v. 17, n. 4, p. N.PAG, doi. 10.1515/sagmb-2018-0048

By:

Stumpf, Michael P.H.

Publication type:

Article

Detecting Sample Misidentifications in Genetic Association Studies.

Published in:

Statistical Applications in Genetics & Molecular Biology, 2012, v. 11, n. 3, p. 1

By:

Ekstrøm, Claus T.;
Feenstra, Bjarke

Publication type:

Article

Statistical inference for homologous gene pairs between two circular genomes: a new circular-circular regression model.

Published in:

Statistical Methods & Applications, 2016, v. 25, n. 3, p. 421, doi. 10.1007/s10260-015-0341-8

By:

SenGupta, Ashis;
Kim, Sungsu

Publication type:

Article

Comparing performance of non-tree-based and tree-based association mapping methods.

Published in:

BMC Proceedings, 2016, v. 10, p. 405, doi. 10.1186/s12919-016-0063-4

By:

Thompson, Katherine L.;
Fardo, David W.

Publication type:

Article

Points of view: Managing deep data in genome browsers.

Published in:

Nature Methods, 2012, v. 9, n. 6, p. 521, doi. 10.1038/nmeth.2049

By:

Nielsen, Cydney;
Wong, Bang

Publication type:

Article

WiggleTools: parallel processing of large collections of genome-wide datasets for visualization and statistical analysis.

Published in:

Bioinformatics, 2014, v. 30, n. 7, p. 1008, doi. 10.1093/bioinformatics/btt737

By:

Zerbino, Daniel R.;
Johnson, Nathan;
Juettemann, Thomas;
Wilder, Steven P.;
Flicek, Paul

Publication type:

Article

Identification of important regressor groups, subgroups and individuals via regularization methods: application to gut microbiome data.

Published in:

Bioinformatics, 2014, v. 30, n. 6, p. 831, doi. 10.1093/bioinformatics/btt608

By:

Garcia, Tanya P.;
Müller, Samuel;
Carroll, Raymond J.;
Walzem, Rosemary L.

Publication type:

Article

A statistical framework for power calculations in ChIP-seq experiments.

Published in:

Bioinformatics, 2014, v. 30, n. 6, p. 753, doi. 10.1093/bioinformatics/btt200

By:

Zuo, Chandler;
Keleş, Sündüz

Publication type:

Article

Cystic fibrosis genetics: from molecular understanding to clinical application.

Published in:

Nature Reviews Genetics, 2015, v. 16, n. 1, p. 45, doi. 10.1038/nrg3849

By:

Cutting, Garry R.

Publication type:

Article

Genome Survey Sequencing of Luffa Cylindrica L. and Microsatellite High Resolution Melting (SSR-HRM) Analysis for Genetic Relationship of Luffa Genotypes.

Published in:

International Journal of Molecular Sciences, 2017, v. 18, n. 9, p. 1942, doi. 10.3390/ijms18091942

By:

Jianyu An;
Mengqi Yin;
Qin Zhang;
Dongting Gong;
Xiaowen Jia;
Yajing Guan;
Jin Hu

Publication type:

Article

Genome alignment with graph data structures: a comparison.

Published in:

BMC Bioinformatics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2105-15-99

By:

Kehr, Birte;
Trappe, Kathrin;
Holtgrewe, Manuel;
Reinert, Knut

Publication type:

Article

Myriads: P-value-based multiple testing correction.

Published in:

Bioinformatics, 2018, v. 34, n. 6, p. 1043, doi. 10.1093/bioinformatics/btx746

By:

Carvajal-Rodríguez, Antonio

Publication type:

Article

sBWT: memory efficient implementation of the hardware-acceleration-friendly Schindler transform for the fast biological sequence mapping.

Published in:

Bioinformatics, 2016, v. 32, n. 22, p. 3498, doi. 10.1093/bioinformatics/btw419

By:

Chia-Hua Chang;
Min-Te Chou;
Yi-Chung Wu;
Ting-Wei Hong;
Yun-Lung Li;
Chia-Hsiang Yang;
Jui-Hung Hung

Publication type:

Article

Genome-wide identification and transcriptional profiling analysis of auxin response-related gene families in cucumber.

Published in:

BMC Research Notes, 2014, v. 7, n. 1, p. 1, doi. 10.1186/1756-0500-7-218

By:

Jian Wu;
Songyu Liu;
Xiaoyan Guan;
Lifei Chen;
Yanjun He;
Jie Wang;
Gang Lu

Publication type:

Article

Accounting for selection and correlation in the analysis of two-stage genome-wide association studies.

Published in:

2016

By:

ROBERTSON, DAVID S.;
PREVOST, A. TOBY;
BOWDEN, JACK

Publication type:

journal article

Meta-Qtest: meta-analysis of quadratic test for rare variants.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 5, p. N.PAG, doi. 10.1186/s12920-019-0516-5

By:

Ka, Jieun;
Lee, Jaehoon;
Kim, Yongkang;
Oh, Bermseok;
Park, Taesung

Publication type:

Article

Chromatin Insulators and Topological Domains: Adding New Dimensions to 3D Genome Architecture.

Published in:

Genes, 2015, v. 6, n. 3, p. 790, doi. 10.3390/genes6030790

By:

Matharu, Navneet K.;
Ahanger, Sajad H.

Publication type:

Article

1000 Genomes Project Finds Substantial Genetic Variation Among Populations.

Published in:

JAMA: Journal of the American Medical Association, 2012, v. 308, n. 22, p. 2322, doi. 10.1001/jama.2012.88674

By:

Kuehn, Bridget M.

Publication type:

Article

The present and future of de novo whole-genome assembly.

Published in:

Briefings in Bioinformatics, 2018, v. 19, n. 1, p. 23, doi. 10.1093/bib/bbw096

By:

Sohn, Jang-il;
Nam, Jin-Wu

Publication type:

Article

Experiences and attitudes of residents regarding a community-based genome cohort study in Japan: a population-based, cross-sectional study.

Published in:

BMC Medical Genomics, 2016, v. 9, p. 1, doi. 10.1186/s12920-016-0175-8

By:

Miyamoto, Keiko;
Iwakuma, Miho;
Nakayama, Takeo

Publication type:

Article