Works matching DE "GENETIC transcription in bacteria"

Results: 288

Expression of an alkane monooxygenase ( alkB) gene and methyl tert-butyl ether co-metabolic oxidation in Pseudomonas citronellolis.

Published in:

Biotechnology Letters, 2015, v. 37, n. 4, p. 807, doi. 10.1007/s10529-014-1737-5

By:

Bravo, Ana;
Sigala, Juan;
Borgne, Sylvie;
Morales, Marcia

Publication type:

Article

Influence of promoter and signal peptide on the expression of pullulanase in Bacillus subtilis.

Published in:

Biotechnology Letters, 2014, v. 36, n. 9, p. 1783, doi. 10.1007/s10529-014-1538-x

By:

Wang, Yapin;
Liu, Yihan;
Wang, Zhengxiang;
Lu, Fuping

Publication type:

Article

Imperatorin inhibits the expression of alpha-hemolysin in Staphylococcus aureus strain BAA-1717 (USA300).

Published in:

Antonie van Leeuwenhoek, 2016, v. 109, n. 7, p. 915, doi. 10.1007/s10482-016-0690-9

By:

Ouyang, Ping;
Chen, Junjie;
Sun, Mao;
Yin, Zhongqiong;
Lin, Juchun;
Fu, Hualin;
Shu, Gang;
He, Changliang;
Lv, Cheng;
Deng, Xuming;
Wang, Kaiyu;
Geng, Yi;
Yin, Lizi

Publication type:

Article

Effect of negative pressure on growth, secretion and biofilm formation of Staphylococcus aureus.

Published in:

Antonie van Leeuwenhoek, 2015, v. 108, n. 4, p. 907, doi. 10.1007/s10482-015-0545-9

By:

Li, Tongtong;
Wang, Guoqi;
Yin, Peng;
Li, Zhirui;
Zhang, Licheng;
Liu, Jianheng;
Li, Ming;
Zhang, Lihai;
Han, Li;
Tang, Peifu

Publication type:

Article

Bacterial reference genes for gene expression studies by RT-qPCR: survey and analysis.

Published in:

Antonie van Leeuwenhoek, 2015, v. 108, n. 3, p. 685, doi. 10.1007/s10482-015-0524-1

By:

Rocha, Danilo;
Santos, Carolina;
Pacheco, Luis

Publication type:

Article

Transcriptional regulation of the iac locus from Acinetobacter baumannii by the phytohormone indole-3-acetic acid.

Published in:

Antonie van Leeuwenhoek, 2015, v. 107, n. 5, p. 1237, doi. 10.1007/s10482-015-0417-3

By:

Shu, Hung-Yu;
Lin, Ling-Chun;
Lin, Tze-Kang;
Chen, Hao-Ping;
Yang, Hsueh-Hui;
Peng, Kou-Cheng;
Lin, Guang-Huey

Publication type:

Article

Reference genes for RT-qPCR studies in Corynebacterium pseudotuberculosis identified through analysis of RNA-seq data.

Published in:

Antonie van Leeuwenhoek, 2014, v. 106, n. 4, p. 605, doi. 10.1007/s10482-014-0231-3

By:

Carvalho, Daiane;
Sá, Pablo;
Castro, Thiago;
Carvalho, Rodrigo;
Pinto, Anne;
Gil, Danilo;
Bagano, Priscilla;
Bastos, Bruno;
Costa, Lilia;
Meyer, Roberto;
Silva, Artur;
Azevedo, Vasco;
Ramos, Rommel;
Pacheco, Luis

Publication type:

Article

Metatranscriptome analysis of active microbial communities in produced water samples from the Marcellus Shale.

Published in:

Microbial Ecology, 2016, v. 72, n. 3, p. 571, doi. 10.1007/s00248-016-0811-z

By:

Vikram, Amit;
Lipus, Daniel;
Bibby, Kyle

Publication type:

Article

Molecular Ecology of nifH Genes and Transcripts Along a Chronosequence in Revegetated Areas of the Tengger Desert.

Published in:

Microbial Ecology, 2016, v. 71, n. 1, p. 150, doi. 10.1007/s00248-015-0657-9

By:

Wang, Jin;
Bao, Jing-Ting;
Li, Xin-Rong;
Liu, Yu-Bing

Publication type:

Article

Pairwise Transcriptomic Analysis of the Interactions Between the Ectomycorrhizal Fungus Laccaria bicolor S238N and Three Beneficial, Neutral and Antagonistic Soil Bacteria.

Published in:

Microbial Ecology, 2015, v. 69, n. 1, p. 146, doi. 10.1007/s00248-014-0445-y

By:

Deveau, Aurélie;
Barret, Matthieu;
Diedhiou, Abdala;
Leveau, Johan;
Boer, Wietse;
Martin, Francis;
Sarniguet, Alain;
Frey-Klett, Pascale

Publication type:

Article

Bovine Endometrial Epithelial Cells Scale Their Pro-inflammatory Response In vitro to Pathogenic Trueperella pyogenes Isolated from the Bovine Uterus in a Strain-Specific Manner.

Published in:

Frontiers in Cellular & Infection Microbiology, 2017, v. 7, p. 1, doi. 10.3389/fcimb.2017.00264

By:

Ibrahim, Mohammad;
Peter, Sarah;
Wagener, Karen;
Drillich, Marc;
Ehling-Schulz, Monika;
Einspanier, Ralf;
Gabler, Christoph

Publication type:

Article

Impact of a novel precursor on FK506 production and key gene transcription in Streptomyces tsukubaensis No. 9993.

Published in:

Research on Chemical Intermediates, 2016, v. 42, n. 4, p. 3351, doi. 10.1007/s11164-015-2215-y

By:

Sun, Yan;
Ye, Ruifang

Publication type:

Article

A new strategy for enhancement of poly-γ-glutamic acid production by multiple physicochemical stresses in Bacillus licheniformis.

Published in:

Journal of Chemical Technology & Biotechnology, 2015, v. 90, n. 4, p. 709, doi. 10.1002/jctb.4362

By:

Wei, Xuetuan;
Tian, Guangming;
Ji, Zhixia;
Chen, Shouwen

Publication type:

Article

Pervasive transcription: detecting functional RNAs in bacteria.

Published in:

Transcription (2154-1264), 2014, v. 5, n. 4, p. N.PAG, doi. 10.4161/21541272.2014.944039

By:

Lybecker, Meghan;
Bilusic, Ivana;
Raghavan, Rahul

Publication type:

Article

Transcriptional regulation of bacterial virulence gene expression by molecular oxygen and nitric oxide.

Published in:

Virulence, 2014, v. 5, n. 8, p. 794, doi. 10.4161/viru.27794

By:

Green, Jeffrey;
Rolfe, Matthew D;
Smith, Laura J

Publication type:

Article

Recent advances in the characterization of Crl, the unconventional activator of the stress sigma factor σ<sup>S</sup>/RpoS.

Published in:

Biomolecular Concepts, 2016, v. 7, n. 3, p. 197, doi. 10.1515/bmc-2016-0006

By:

Cavaliere, Paola;
Norel, Françoise

Publication type:

Article

Understanding butanol tolerance and assimilation in P seudomonas putida BIRD-1: an integrated omics approach.

Published in:

Microbial Biotechnology, 2016, v. 9, n. 1, p. 100, doi. 10.1111/1751-7915.12328

By:

Cuenca, María del Sol;
Roca, Amalia;
Molina-Santiago, Carlos;
Duque, Estrella;
Armengaud, Jean;
Gómez-Garcia, María R.;
Ramos, Juan L.

Publication type:

Article

Central Memory CD4+ T Cells Are Responsible for the Recombinant Bacillus Calmette-Guérin ΔureC::hly Vaccine's Superior Protection Against Tuberculosis.

Published in:

Journal of Infectious Diseases, 2014, v. 210, n. 12, p. 1928, doi. 10.1093/infdis/jiu347

By:

Vogelzang, Alexis;
Perdomo, Carolina;
Zedler, Ulrike;
Kuhlmann, Stefanie;
Hurwitz, Robert;
Gengenbacher, Martin;
Kaufmann, Stefan H. E.

Publication type:

Article

Homogeneity and heterogeneity in amylase production by Bacillus subtilis under different growth conditions.

Published in:

Microbial Cell Factories, 2016, v. 15, p. 1, doi. 10.1186/s12934-016-0455-1

By:

Ploss, Tina N.;
Reilman, Ewoud;
Monteferrante, Carmine G.;
Denham, Emma L.;
Piersma, Sjouke;
Lingner, Anja;
Vehmaanperä, Jari;
Lorenz, Patrick;
van Dijl, Jan Maarten

Publication type:

Article

Transcriptome signatures of class I and III stress response deregulation in Lactobacillus plantarum reveal pleiotropic adaptation.

Published in:

Microbial Cell Factories, 2013, v. 12, n. 1, p. 1, doi. 10.1186/1475-2859-12-112

By:

de Veen, Hermien Van Bokhorst-van;
Bongers, Roger S.;
Wels, Michiel;
Bron, Peter A.;
Kleerebezem, Michiel

Publication type:

Article

A strategy of gene overexpression based on tandem repetitive promoters in Escherichia coli.

Published in:: Microbial Cell Factories, 2012, v. 11, n. 1, p. 19, doi. 10.1186/1475-2859-11-19
Publication type:: Article

Enzymes involved in the anaerobic degradation of phenol by the sulfate-reducing bacterium Desulfatiglans anilini.

Published in:

BMC Microbiology, 2018, v. 18, n. 1, p. N.PAG, doi. 10.1186/s12866-018-1238-0

By:

Xie, Xiaoman;
Müller, Nicolai

Publication type:

Article

Global effects of the CSR-1 RNA interference pathway on the transcriptional landscape.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 4, p. 358, doi. 10.1038/nsmb.2801

By:

Cecere, Germano;
Hoersch, Sebastian;
O'Keeffe, Sean;
Sachidanandam, Ravi;
Grishok, Alla

Publication type:

Article

Bacterial transcription: A consensus pausing sequence.

Published in:

Nature Reviews Microbiology, 2014, v. 12, n. 6, p. 394, doi. 10.1038/nrmicro3286

By:

Du Toit, Andrea

Publication type:

Article

Bacterial transcription: Transcription factor sliding in live bacteria.

Published in:

Nature Reviews Microbiology, 2012, v. 10, n. 8, p. 523, doi. 10.1038/nrmicro2844

By:

Kåhrström, Christina Tobin

Publication type:

Article

Transcriptome Response to Nitrosative Stress in Rhodobacter sphaeroides 2.4.1.

Published in:

Bioscience, Biotechnology & Biochemistry, 2013, v. 77, n. 1, p. 111, doi. 10.1271/bbb.120601

By:

ARAI, Hiroyuki;
ROH, Jung Hyeob;
ERASO, Jesus M.;
KAPLAN, Samuel

Publication type:

Article

Computational Identification and Evolutionary Relationships of the MicroRNA Gene Cluster miR-71/2 in Protostomes.

Published in:

2013

By:

Souza Gomes, Matheus;
Donoghue, Mark;
Muniyappa, MohanKumar;
Pereira, Roberta;
Guerra-Sá, Renata;
Spillane, Charles

Publication type:

Letter

ArtR, a novel sRNA of Staphylococcus aureus, regulates α-toxin expression by targeting the 5′ UTR of sarT mRNA.

Published in:

Medical Microbiology & Immunology, 2014, v. 203, n. 1, p. 1, doi. 10.1007/s00430-013-0307-0

By:

Xue, Ting;
Zhang, Xu;
Sun, Haipeng;
Sun, Baolin

Publication type:

Article

A single mutation in rapP induces cheating to prevent cheating in Bacillus subtilis by minimizing public good production.

Published in:

Communications Biology, 2018, v. 1, n. 1, p. N.PAG, doi. 10.1038/s42003-018-0136-1

By:

Lyons, Nicholas A.;
Kolter, Roberto

Publication type:

Article

Transcriptional coupling and repair of 8-OxoG activate a RecA-dependent checkpoint that controls the onset of sporulation in Bacillus subtilis.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-82247-8

By:

Suárez, Valeria P.;
Martínez, Lissett E.;
Leyva-Sánchez, Hilda C.;
Valenzuela-García, Luz I.;
Lara-Martínez, Reyna;
Jiménez-García, Luis F.;
Ramírez-Ramírez, Norma;
Obregon-Herrera, Armando;
Cuéllar-Cruz, Mayra;
Robleto, Eduardo A.;
Pedraza-Reyes, Mario

Publication type:

Article

Transcriptional portrait of M. bovis BCG during biofilm production shows genes differentially expressed during intercellular aggregation and substrate attachment.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-69152-2

By:

Flores-Valdez, Mario Alberto;
Aceves-Sánchez, Michel de Jesús;
Peterson, Eliza J. R.;
Baliga, Nitin;
Bravo-Madrigal, Jorge;
De la Cruz-Villegas, Miguel Ángel;
Ares, Miguel A.;
Born, Sarah;
Voskuil, Martin;
Pérez-Padilla, Nayeli Areli;
Burciaga-Flores, Mirna;
Camacho-Villegas, Tanya Amanda;
Espinoza-Jorge, María Guadalupe

Publication type:

Article

HIGH STRENGTH ACETIC ACID PRODUCTION IN ACETOBACTER PASTEURIANUS BY TRANSCRIPTIONAL ANALYSIS AND ENHANCEMENT OF ALCOHOL RESPIRATORY CHAIN RUN.

Published in:

Acetic Acid Bacteria, 2015, v. 4, n. 1S, p. 9

By:

Xia, X.;
Zhu, C.;
Qi, Z.;
Wang, W.

Publication type:

Article

Genome Sequence of the Mesophilic Thermotogales Bacterium Mesotoga prima MesG1.Ag.4.2 Reveals the Largest Thermotogales Genome To Date.

Published in:

Genome Biology & Evolution, 2012, v. 4, n. 8, p. 812, doi. 10.1093/gbe/evs059

By:

Zhaxybayeva, Olga;
Swithers, Kristen S.;
Foght, Julia;
Green, Anna G.;
Bruce, David;
Detter, Chris;
Han, Shunsheng;
Teshima, Hazuki;
Han, James;
Woyke, Tanja;
Pitluck, Sam;
Nolan, Matt;
Ivanova, Natalia;
Pati, Amrita;
Land, Miriam L.;
Dlutek, Marlena;
Doolittle, W. Ford;
Noll, Kenneth M.;
Nesbø, Camilla L.

Publication type:

Article

Global transcriptional analysis reveals surface remodeling of Anaplasma marginale in the tick vector.

Published in:

Parasites & Vectors, 2014, v. 7, n. 1, p. 1, doi. 10.1186/1756-3305-7-193

By:

Hammac, G. Kenitra;
Aguilar Pierlé, Sebastián;
Xiaoya Cheng;
Scoles, Glen A.;
Brayton, Kelly A.

Publication type:

Article

The transcriptome of Candida albicans mitochondria and the evolution of organellar transcription units in yeasts.

Published in:

BMC Genomics, 2015, v. 16, p. 1, doi. 10.1186/s12864-015-2078-z

By:

Kolondra, Adam;
Labedzka-Dmoch, Karolina;
Wenda, Joanna M.;
Drzewicka, Katarzyna;
Golik, Pawel

Publication type:

Article

Defining the nitrogen regulated transcriptome of Mycobacterium smegmatis using continuous culture.

Published in:

BMC Genomics, 2015, v. 16, p. 1, doi. 10.1186/s12864-015-2051-x

By:

Petridis, Michael;
Benjak, Andrej;
M. Cook, Gregory

Publication type:

Article

Bacterial transcript reorganization in thermal adaptive evolution.

Published in:

BMC Genomics, 2015, v. 16, p. 1, doi. 10.1186/s12864-015-1999-x

By:

Bei-Wen Ying;
Yuki Matsumoto;
Kazuki Kitahara;
Shingo Suzuki;
Naoaki Ono;
Chikara Furusawa;
Toshihiko Kishimoto;
Tetsuya Yomo

Publication type:

Article

Refined analysis of the Campylobacter jejuni iron-dependent/independent Fur- and PerR-transcriptomes.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1661-7

By:

Butcher, James;
Handley, Rebecca A.;
van Vliet, Arnoud H. M.;
Stintzi, Alain

Publication type:

Article

An empirical strategy to detect bacterial transcript structure from directional RNA-seq transcriptome data.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1555-8

By:

Yejun Wang;
MacKenzie, Keith D.;
White, Aaron P.

Publication type:

Article

Comprehensive insights into transcriptional adaptation of intracellular mycobacteria by microbe-enriched dual RNA sequencing.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-014-1197-2

By:

Rienksma, Rienk A.;
Suarez-Diez, Maria;
Mollenkopf, Hans-Joachim;
Dolganov, Gregory M.;
Dorhoi, Anca;
Schoolnik, Gary K.;
dos Santos, Vitor A. P. Martins;
Kaufmann, Stefan H. E.;
Schaap, Peter J.;
Gengenbacher, Martin

Publication type:

Article

Transcriptomic analysis of the phytopathogenic oomycete Phytophthora cactorum provides insights into infection-related effectors.

Published in:

BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-980

By:

Xiao-Ren Chen;
Bo-Yue Zhang;
Yu-Ping Xing;
Qi-Yuan Li;
Yan-Peng Li;
Yun-Hui Tong;
Jing-You Xu

Publication type:

Article

Selective and flexible depletion of problematic sequences from RNA-seq libraries at the cDNA stage.

Published in:

BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-401

By:

Archer, Stuart K.;
Shirokikh, Nikolay E.;
Preiss, Thomas

Publication type:

Article

Differential expression of small RNAs from Burkholderia thailandensis in response to varying environmental and stress conditions.

Published in:

BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-385

By:

Stubben, Chris J.;
Micheva-Viteva, Sofiya N.;
Yulin Shou;
Buddenborg, Sarah K.;
Dunbar, John M.;
Hong-Geller, Elizabeth

Publication type:

Article

Toxoplasma gondii merozoite gene expression analysis with comparison to the life cycle discloses a unique expression state during enteric development.

Published in:

BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-350

By:

Behnke, Michael S.;
Zhang, Tiange P.;
Dubey, Jitender P.;
Sibley, L. David

Publication type:

Article

DNA-encoded nucleosome occupancy is associated with transcription levels in the human malaria parasite Plasmodium falciparum.

Published in:

BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-347

By:

Bunnik, Evelien M.;
Polishko, Anton;
Prudhomme, Jacques;
Ponts, Nadia;
Gill, Sarjeet S.;
Lonardi, Stefano;
Le Roch, Karine G.

Publication type:

Article

Layering genetic circuits to build a single cell, bacterial half adder.

Published in:

BMC Biology, 2015, v. 13, n. 1, p. 1, doi. 10.1186/s12915-015-0146-0

By:

Wong, Adison;
Huijuan Wang;
Chueh Loo Poh;
Kitney, Richard I.

Publication type:

Article

Cytoadhesion to gC1qR through Plasmodium falciparum Erythrocyte Membrane Protein 1 in Severe Malaria.

Published in:

PLoS Pathogens, 2016, v. 12, n. 11, p. 1, doi. 10.1371/journal.ppat.1006011

By:

Magallón-Tejada, Ariel;
Machevo, Sónia;
Cisteró, Pau;
Lavstsen, Thomas;
Aide, Pedro;
Rubio, Mercedes;
Jiménez, Alfons;
Turner, Louise;
Valmaseda, Aida;
Gupta, Himanshu;
De Las Salas, Briegel;
Mandomando, Inacio;
Wang, Christian W.;
Petersen, Jens E. V.;
Muñoz, Jose;
Gascón, Joaquim;
Macete, Eusebio;
Alonso, Pedro L.;
Chitnis, Chetan E.;
Bassat, Quique

Publication type:

Article

Transcriptional regulation of dimethyl sulfoxide respiration in a haloarchaeon, Haloferax volcanii.

Published in:

Extremophiles, 2016, v. 20, n. 1, p. 27, doi. 10.1007/s00792-015-0794-6

By:

Qi, Qiuzi;
Ito, Yoshiyasu;
Yoshimatsu, Katsuhiko;
Fujiwara, Taketomo

Publication type:

Article

Starvation- and xenobiotic-related transcriptomic responses of the sulfanilic acid-degrading bacterium, Novosphingobium resinovorum SA1.

Published in:

Applied Microbiology & Biotechnology, 2018, v. 102, n. 1, p. 305, doi. 10.1007/s00253-017-8553-5

By:

Hegedüs, Botond;
Kós, Péter B.;
Bende, Gábor;
Bounedjoum, Naila;
Maróti, Gergely;
Laczi, Krisztián;
Szuhaj, Márk;
Perei, Katalin;
Rákhely, Gábor

Publication type:

Article

Vibrational spectroscopy combined with transcriptomic analysis for investigation of bacterial responses towards acid stress.

Published in:

Applied Microbiology & Biotechnology, 2018, v. 102, n. 1, p. 333, doi. 10.1007/s00253-017-8561-5

By:

Hlaing, Mya M.;
Wood, Bayden R.;
McNaughton, Don;
Rood, Julian I.;
Fox, Edward M.;
Augustin, Mary Ann

Publication type:

Article