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Entourage: all-in-one sequence analysis software for genome assembly, virus detection, virus discovery, and intrasample variation profiling.
- Published in:
- BMC Bioinformatics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12859-024-05846-y
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- Article
Genomewide architecture of adaptation in experimentally evolved Drosophila characterized by widespread pleiotropy.
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- Journal of Genetics, 2024, v. 103, n. 1, p. 1, doi. 10.1007/s12041-023-01460-8
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- Article
FSTest: an efficient tool for cross-population fixation index estimation on variant call format files.
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- Journal of Genetics, 2024, v. 103, n. 1, p. 1, doi. 10.1007/s12041-023-01459-1
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- Article
Readsynth: short-read simulation for consideration of composition-biases in reduced metagenome sequencing approaches.
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- BMC Bioinformatics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12859-024-05809-3
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- Article
Pan-Genome Analysis and Secondary Metabolic Pathway Mining of Biocontrol Bacterium Brevibacillus brevis.
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- Agronomy, 2024, v. 14, n. 5, p. 1024, doi. 10.3390/agronomy14051024
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- Article
pipesnake: generalized software for the assembly and analysis of phylogenomic datasets from conserved genomic loci.
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- Bioinformatics, 2024, v. 40, n. 5, p. 1, doi. 10.1093/bioinformatics/btae195
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- Article
A Simulation–Optimization Model for Optimal Aquifer Remediation, Using Genetic Algorithms and MODFLOW.
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- Hydrology (2306-5338), 2024, v. 11, n. 5, p. 60, doi. 10.3390/hydrology11050060
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- Article
First report and pathogenicity of Vibrio campbellii (VC<sub>AHPND</sub>) isolated in South Korea.
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- Journal of Fish Diseases, 2024, v. 47, n. 5, p. 1, doi. 10.1111/jfd.13928
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- Article
Whole-genome sequencing of clinical isolates of Citrobacter Europaeus in China carrying bla<sub>OXA−48</sub> and bla<sub>NDM−1</sub>.
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- Annals of Clinical Microbiology & Antimicrobials, 2024, v. 23, n. 1, p. 1, doi. 10.1186/s12941-024-00699-y
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- Article
The Relationship Between Systemic Lupus Erythematosus and Osteoporosis Based on Different Ethnic Groups: a Two-Sample Mendelian Randomization Analysis.
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- Calcified Tissue International, 2024, v. 114, n. 4, p. 386, doi. 10.1007/s00223-024-01190-8
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- Article
A comparison of software for analysis of rare and common short tandem repeat (STR) variation using human genome sequences from clinical and population-based samples.
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- PLoS ONE, 2024, v. 19, n. 4, p. 1, doi. 10.1371/journal.pone.0300545
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- Article
COSAP: Comparative Sequencing Analysis Platform.
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- BMC Bioinformatics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12859-024-05756-z
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- Article
Application of Nested-qPCR-High Resolution Melting (HRM) Technology on Strongyloidesstercoralis Isolates from Iran.
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- Acta Parasitologica, 2024, v. 69, n. 1, p. 889, doi. 10.1007/s11686-024-00821-2
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- Article
Genomic diversity and structure of a Neotropical microendemic fig tree.
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- Ecology & Evolution (20457758), 2024, v. 14, n. 3, p. 1, doi. 10.1002/ece3.11178
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- Article
Diversity of astroviruses in wild animals in Yunnan province, China.
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- Virology Journal, 2024, v. 21, n. 1, p. 1, doi. 10.1186/s12985-024-02314-0
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- Article
Evaluation of the genetic viability of metapopulation scenarios for the Iberian lynx.
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- Animal Conservation, 2024, v. 27, n. 1, p. 112, doi. 10.1111/acv.12890
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- Article
Assessment of Genetic Diversity for Cercospora Leaf Spot (CLS) Resistance in Mung Bean [Vigna radiata (L.) Wilczek] using SSR Markers.
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- Legume Research: An International Journal, 2024, v. 47, n. 2, p. 312, doi. 10.18805/LR-4985
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- Article
GenAPoPop 1.0: A user‐friendly software to analyse genetic diversity and structure from partially clonal and selfed autopolyploid organisms.
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- Molecular Ecology Resources, 2024, v. 24, n. 1, p. 1, doi. 10.1111/1755-0998.13886
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- Article
Compositional Dynamics and Codon Usage Pattern of Myogenin (MyoG) Gene across Different Mammalian Species.
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- Biology Bulletin, 2023, v. 50, p. S577, doi. 10.1134/S1062359023604068
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- Article
Automated DNA extraction from recent and archaeological human skeletal remains using QIAGEN's EZ2 Connect Fx Instrument - an experience report.
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- Genetics & Applications, 2023, v. 7, n. 2, p. 1, doi. 10.31383/ga.vol7iss2ga04
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- Article
Patchwork: Alignment-Based Retrieval and Concatenation of Phylogenetic Markers from Genomic Data.
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- Genome Biology & Evolution, 2023, v. 15, n. 12, p. 1, doi. 10.1093/gbe/evad227
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- Article
The Analysis of Genetic Variation in the Mitochondrial ND6 Gene and its Application for the Identification of Indonesian Catfish Species.
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- Indian Journal of Animal Research, 2023, v. 57, n. 12, p. 1627, doi. 10.18805/IJAR.BF-1495
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- Article
Comparison of databases useful for the analysis of vaginal microbiota in Japanese women using next-generation sequencing data (QIIME 2 software).
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- Journal of Applied Microbiology, 2023, v. 134, n. 12, p. 1, doi. 10.1093/jambio/lxad283
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- Article
Genetic diversity of merozoite surface protein-5 (MSP-5) of Plasmodium vivax isolates from Malaria patients in Iran.
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- BMC Infectious Diseases, 2023, v. 23, n. 1, p. 1, doi. 10.1186/s12879-023-08804-w
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- Article
IDH1<sup>R132H</sup> mutation increases radiotherapy efficacy and a 4-gene radiotherapy-related signature of WHO grade 4 gliomas.
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- Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-46335-1
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- Article
Identification of resistance to Sclerotinia sclerotiorum and genome-wide association analysis of resistance sites in Brassica juncea from Yunnan Province.
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- Chinese Journal of Oil Crop Sciences, 2023, v. 45, n. 6, p. 1128, doi. 10.19802/j.issn.1007-9084.2023209
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- Article
Production rates of cosmogenic nuclides in extraterrestrial material using GEANT4 software.
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- Journal of Radioanalytical & Nuclear Chemistry, 2023, v. 332, n. 11, p. 4403, doi. 10.1007/s10967-023-09135-5
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- Article
Multidrug-Resistant Escherichia coli Isolate of Chinese Bovine Origin Carrying the bla CTX-M-55 Gene Located in IS 26 -Mediated Composite Translocatable Units.
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- Microorganisms, 2023, v. 11, n. 11, p. 2795, doi. 10.3390/microorganisms11112795
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- Article
Three-Dimensional Prediction and Evaluation of Baiyanghe Uranium Deposit in the Xuemistan Volcanic Belt, Xinjiang.
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- Minerals (2075-163X), 2023, v. 13, n. 11, p. 1408, doi. 10.3390/min13111408
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- Article
Bioinformatic challenge on prostate cancer and urinary microbiome.
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- Revista Latinoamericana de Hipertension, 2023, v. 18, n. 6, p. 266, doi. 10.5281/zenodo.10029976
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- Article
Genomic prediction based on selective linkage disequilibrium pruning of low-coverage whole-genome sequence variants in a pure Duroc population.
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- Genetics Selection Evolution, 2023, v. 55, n. 1, p. 1, doi. 10.1186/s12711-023-00843-w
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- Article
Population-based prevalence and mutational landscape of von Willebrand disease using large-scale genetic databases.
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- NPJ Genomic Medicine, 2023, v. 8, n. 1, p. 1, doi. 10.1038/s41525-023-00375-8
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A simulation study comparing advanced marker-assisted selection with genomic selection in tree breeding programs.
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- G3: Genes | Genomes | Genetics, 2023, v. 13, n. 10, p. 1, doi. 10.1093/g3journal/jkad164
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- Article
An empirical test of the estimation of historical effective population size using Drosophila melanogaster.
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- Molecular Ecology Resources, 2023, v. 23, n. 7, p. 1632, doi. 10.1111/1755-0998.13837
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- Article
AlignStatPlot: An R package and online tool for robust sequence alignment statistics and innovative visualization of big data.
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- PLoS ONE, 2023, v. 18, n. 9, p. 1, doi. 10.1371/journal.pone.0291204
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- Article
Assessment of positive selection across SARS-CoV-2 variants via maximum likelihood.
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- PLoS ONE, 2023, v. 18, n. 9, p. 1, doi. 10.1371/journal.pone.0291271
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- Article
BiocMAP: a Bioconductor-friendly, GPU-accelerated pipeline for bisulfite-sequencing data.
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- BMC Bioinformatics, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s12859-023-05461-3
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- Article
Population history modulates the fitness effects of Copy Number Variation in the Roma.
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- Human Genetics, 2023, v. 142, n. 9, p. 1327, doi. 10.1007/s00439-023-02579-5
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- Article
Genetic Programming in Software Engineering: A Systematic Literature Review.
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- International Journal of Combinatorial Optimization Problems & Informatics, 2023, v. 14, n. 3, p. 61, doi. 10.61467/2007.1558.2023.v14i3.408
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- Article
一株鱼源致病性嗜水气单胞菌 XDMG 的全基因组测序 及比较基因组分析.
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- Biotechnology Bulletin, 2023, v. 39, n. 8, p. 291, doi. 10.13560/j.cnki.biotech.bull.1985.2022-1507
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- Article
V-primer: software for the efficient design of genome-wide InDel and SNP markers from multi-sample variant call format (VCF) genotyping data.
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- Breeding Science, 2023, v. 73, n. 4, p. 415, doi. 10.1270/jsbbs.23018
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- Article
3 年生赤皮青冈家系生长和 形质性状变异与选择.
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- Forest Research, 2023, v. 36, n. 4, p. 31, doi. 10.12403/j.1001-1498.20220563
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- Article
HARDWARE ACCELERATION OF DNA READ ALIGNMENT PROGRAMS: CHALLENGES AND OPPORTUNITIES.
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- Fractals, 2023, v. 31, n. 7, p. 1, doi. 10.1142/S0218348X23500974
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- Article
Retracted: Research on Optimization Strategy of Task Scheduling Software Based on Genetic Algorithm in Cloud Computing Environment.
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- 2023
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- Correction Notice
Regularized sequence-context mutational trees capture variation in mutation rates across the human genome.
- Published in:
- PLoS Genetics, 2023, v. 19, n. 7, p. 1, doi. 10.1371/journal.pgen.1010807
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- Article
单核细胞增生李斯特菌 LMXJ15 全基因组测序及分析.
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- Biotechnology Bulletin, 2023, v. 39, n. 7, p. 298, doi. 10.13560/j.cnki.biotech.bull.1985.2022-1093
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- Article
刺猬线粒体基因组密码子偏好性分析.
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- Feed Review, 2023, n. 4, p. 31, doi. 10.20041/j.cnki.slbl.2023.04.006
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- Article
The Genetic Diversity of Stallions of Different Breeds in Russia.
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- Genes, 2023, v. 14, n. 7, p. 1511, doi. 10.3390/genes14071511
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- Article
Bifidobacterium breve PRL2020: Antibiotic-Resistant Profile and Genomic Detection of Antibiotic Resistance Determinants.
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- Microorganisms, 2023, v. 11, n. 7, p. 1649, doi. 10.3390/microorganisms11071649
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- Article
Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations.
- Published in:
- eLife, 2023, p. 1, doi. 10.7554/eLife.84874
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- Article