Works about GENE expression profiling

Results: 5000

Christina Boros Pediatric Award and Pediatric Free Papers.

Published in:: International Journal of Rheumatic Diseases, 2025, v. 28, p. 1, doi. 10.1111/1756-185X.70257
Publication type:: Article

Role of IRF4 in mediating plasmablast differentiation in diffuse large B-cell lymphomas via mTORC1 pathway.

Published in:

Annals of Hematology, 2025, v. 104, n. 4, p. 2449, doi. 10.1007/s00277-025-06273-6

By:

Gao, Jingjing;
Li, Chuntuan;
Lin, Xingzhi;
Zhuang, Yanling;
Wang, Mingquan;
Lin, Hongjun;
Zhu, Xiongpeng

Publication type:

Article

Omics for Nurse Scientists Conducting Environmental Health Research.

Published in:

Annual Review of Nursing Research, 2019, v. 38, n. 1, p. 35, doi. 10.1891/0739-6686.38.35

By:

Heinsberg, Lacey W.;
Conley, Yvette P.

Publication type:

Article

Genomics, Transcriptomics, and Epigenomics in Traumatic Brain Injury Research.

Published in:

Annual Review of Nursing Research, 2015, v. 33, p. 75, doi. 10.1891/0739-6686.33.75

By:

Puccio, Ava M.;
Alexander, Sheila

Publication type:

Article

Combined laser capture microdissection and serial analysis of gene expression from human tissue samples.

Published in:

2005

By:

Cho-Vega, Jeong Hee;
Troncoso, Patricia;
Do, Kim-Anh;
Rago, Carlo;
Wang, Xuemei;
Tsavachidis, Spiridon;
Jeffrey Medeiros, L.;
Spurgers, Kevin;
Logothetis, Christopher;
McDonnell, Timothy J.;
Medeiros, L Jeffrey

Publication type:

journal article

The Orphan Nuclear Receptor TLX Is an Enhancer of STAT1-Mediated Transcription and Immunity to Toxoplasma gondii.

Published in:

PLoS Biology, 2015, v. 13, n. 7, p. 1, doi. 10.1371/journal.pbio.1002200

By:

Beiting, Daniel P.;
Hidano, Shinya;
Baggs, Julie E.;
Geskes, Jeanne M.;
Fang, Qun;
Wherry, E. John;
Hunter, Christopher A.;
Roos, David S.;
Cherry, Sara

Publication type:

Article

The role of gene expression profiling in the management of breast cancer patients.

Published in:

Climacteric, 2012, v. 15, n. 5, p. 430, doi. 10.3109/13697137.2012.677764

By:

Pines, A.

Publication type:

Article

APLP2 is predominantly cleaved by β‐secretase and γ‐secretase in the human brain.

Published in:

Psychogeriatrics, 2023, v. 23, n. 2, p. 311, doi. 10.1111/psyg.12933

By:

Yanagida, Kanta;
Maruyama, Riki;
Tagami, Shinji;
Kudo, Takashi;
Okochi, Masayasu;
Fukumori, Akio

Publication type:

Article

Brain ventricles, CSF and cognition: a narrative review.

Published in:

Psychogeriatrics, 2022, v. 22, n. 4, p. 544, doi. 10.1111/psyg.12839

By:

de Mélo Silva Júnior, Mário Luciano;
Diniz, Paula Rejane Beserra;
de Souza Vilanova, Marcos Vinícius;
Basto, Gabriel Porciúncula Teixeira;
Valença, Marcelo Moraes

Publication type:

Article

Protein expression profiling in the hippocampus after focal cerebral ischemia injury in rats.

Published in:

Journal of Integrative Neuroscience, 2018, v. 17, n. 2, p. 277, doi. 10.3233/JIN-170047

By:

Lichan He;
Rui He;
Ruihua Liang;
Yi Li;
Xiaoqiang Li;
Chuqiao Li;
Suping Zhang

Publication type:

Article

Drug synergy model for malignant diseases using deep learning.

Published in:

Journal of Bioinformatics & Computational Biology, 2023, v. 21, n. 3, p. 1, doi. 10.1142/S0219720023500142

By:

Rani, Pooja;
Dutta, Kamlesh;
Kumar, Vijay

Publication type:

Article

Overlapping group screening for binary cancer classification with TCGA high-dimensional genomic data.

Published in:

Journal of Bioinformatics & Computational Biology, 2023, v. 21, n. 3, p. 1, doi. 10.1142/S0219720023500130

By:

Wang, Jie-Huei;
Chen, Yi-Hau

Publication type:

Article

A network-based dynamic criterion for identifying prediction and early diagnosis biomarkers of complex diseases.

Published in:

Journal of Bioinformatics & Computational Biology, 2022, v. 20, n. 6, p. 1, doi. 10.1142/S0219720022500275

By:

Huang, Xin;
Su, Benzhe;
Wang, Xingyu;
Zhou, Yang;
He, Xinyu;
Liu, Bing

Publication type:

Article

Clinical drug response prediction from preclinical cancer cell lines by logistic matrix factorization approach.

Published in:

Journal of Bioinformatics & Computational Biology, 2022, v. 20, n. 2, p. 1, doi. 10.1142/S0219720021500359

By:

Emdadi, Akram;
Eslahchi, Changiz

Publication type:

Article

Identification of cancer-related module in protein–protein interaction network based on gene prioritization.

Published in:

Journal of Bioinformatics & Computational Biology, 2022, v. 20, n. 1, p. 1, doi. 10.1142/S0219720021500311

By:

Wu, Jingli;
Zhang, Qi;
Li, Gaoshi

Publication type:

Article

Response of gene regulatory networks after infection of H3N2 virus.

Published in:

Journal of Bioinformatics & Computational Biology, 2021, v. 19, n. 4, p. 1, doi. 10.1142/S0219720021500177

By:

Deng, Shiguo;
Yuan, Qianshun;
Zhang, Jing;
Yang, Huijie

Publication type:

Article

Identifying protein complexes from protein–protein interaction networks based on the gene expression profile and core-attachment approach.

Published in:

Journal of Bioinformatics & Computational Biology, 2021, v. 19, n. 3, p. N.PAG, doi. 10.1142/S0219720021500098

By:

Noori, Soheir;
Al-A'Araji, Nabeel;
Al-Shamery, Eman

Publication type:

Article

Gene expression analysis reveals a pitfall in the molecular research of prostate tumors relevant to Gleason score.

Published in:

Journal of Bioinformatics & Computational Biology, 2020, v. 18, n. 5, p. N.PAG, doi. 10.1142/S0219720020500328

By:

Zhang, Wensheng;
Dong, Yan;
Zhang, Kun

Publication type:

Article

Exploring the potential microRNA sponge interactions of breast cancer based on some known interactions.

Published in:

Journal of Bioinformatics & Computational Biology, 2020, v. 18, n. 3, p. N.PAG, doi. 10.1142/S0219720020500079

By:

Tian, Lei;
Wang, Shu-Lin

Publication type:

Article

ClusterMine: A knowledge-integrated clustering approach based on expression profiles of gene sets.

Published in:

Journal of Bioinformatics & Computational Biology, 2020, v. 18, n. 3, p. N.PAG, doi. 10.1142/S0219720020400090

By:

Li, Hong-Dong;
Xu, Yunpei;
Zhu, Xiaoshu;
Liu, Quan;
Omenn, Gilbert S.;
Wang, Jianxin

Publication type:

Article

A new LSTM-based gene expression prediction model: L-GEPM.

Published in:

Journal of Bioinformatics & Computational Biology, 2019, v. 17, n. 4, p. N.PAG, doi. 10.1142/S0219720019500227

By:

Wang, Huiqing;
Li, Chun;
Zhang, Jianhui;
Wang, Jingjing;
Ma, Yue;
Lian, Yuanyuan

Publication type:

Article

Convolutional neural network approach to lung cancer classification integrating protein interaction network and gene expression profiles.

Published in:

Journal of Bioinformatics & Computational Biology, 2019, v. 17, n. 3, p. N.PAG, doi. 10.1142/S0219720019400079

By:

Matsubara, Teppei;
Ochiai, Tomoshiro;
Hayashida, Morihiro;
Akutsu, Tatsuya;
Nacher, Jose C.

Publication type:

Article

Identification of the PCA29 gene signature as a predictor in prostate cancer.

Published in:

Journal of Bioinformatics & Computational Biology, 2019, v. 17, n. 3, p. N.PAG, doi. 10.1142/S0219720019400067

By:

Lee, Jung-Yu;
Lin, Si-Yu;
Lin, Chun-Yu;
Chuang, Yi-Huan;
Huang, Sing-Han;
Tseng, Yu-Yao;
Wang, Hung-Jung;
Yang, Jinn-Moon

Publication type:

Article

Gene-set activity toolbox (GAT): A platform for microarray-based cancer diagnosis using an integrative gene-set analysis approach.

Published in:

Journal of Bioinformatics & Computational Biology, 2016, v. 14, n. 4, p. -1, doi. 10.1142/S0219720016500153

By:

Engchuan, Worrawat;
Meechai, Asawin;
Tongsima, Sissades;
Doungpan, Narumol;
Chan, Jonathan H.

Publication type:

Article

A quantum leap in the reproducibility, precision, and sensitivity of gene expression profile analysis even when sample size is extremely small.

Published in:

Journal of Bioinformatics & Computational Biology, 2015, v. 13, n. 4, p. -1, doi. 10.1142/S0219720015500183

By:

Lim, Kevin;
Li, Zhenhua;
Choi, Kwok Pui;
Wong, Limsoon

Publication type:

Article

Jasmonic acid improves barley photosynthetic efficiency through a possible regulatory module, MYC2-RcaA, under combined drought and salinity stress.

Published in:

Photosynthesis Research, 2024, v. 159, n. 1, p. 69, doi. 10.1007/s11120-023-01074-2

By:

Aliakbari, Massume;
Tahmasebi, Sirous;
Sisakht, Javad Nouripour

Publication type:

Article

Quantitative insight into the metabolism of isoprene-producing Synechocystis sp. PCC 6803 using steady state <sup>13</sup>C-MFA.

Published in:

Photosynthesis Research, 2022, v. 154, n. 2, p. 195, doi. 10.1007/s11120-022-00957-0

By:

Nirati, Yasha;
Purushotham, Nidhish;
Alagesan, Swathi

Publication type:

Article

Functional variations between Mesenchymal Stem Cells of different tissue origins: A comparative gene expression profiling.

Published in:

Biotechnology Letters, 2020, v. 42, n. 7, p. 1287, doi. 10.1007/s10529-020-02898-x

By:

Sangeetha, K. N.;
Vennila, Rosy;
Secunda, R.;
Sakthivel, S.;
Pathak, Surajit;
Jeswanth, S.;
Surendran, R.

Publication type:

Article

Comparative RNA sequencing based transcriptome profiling of regular bearing and alternate bearing mango (Mangifera indica L.) varieties reveals novel insights into the regulatory mechanisms underlying alternate bearing.

Published in:

Biotechnology Letters, 2020, v. 42, n. 6, p. 1035, doi. 10.1007/s10529-020-02863-8

By:

Sharma, Nimisha;
Singh, Anand Kumar;
Singh, Sanjay Kumar;
Mahato, Ajay Kumar;
Srivastav, Manish;
Singh, Nagendra Kumar

Publication type:

Article

Integrated bioinformatics analyses identified SCL3-induced regulatory network in Arabidopsis thaliana roots.

Published in:

Biotechnology Letters, 2020, v. 42, n. 6, p. 1019, doi. 10.1007/s10529-020-02850-z

By:

Weng, Chun-Yue;
Zhu, Mo-Han;
Liu, Zhi-Qiang;
Zheng, Yu-Guo

Publication type:

Article

Semi-synthetic product dihydroartemisinin inhibited fibronectin-1 and integrin-β1 and interfered with the migration of HCCLM6 cells via PI3K-AKT pathway.

Published in:

Biotechnology Letters, 2020, v. 42, n. 6, p. 917, doi. 10.1007/s10529-020-02839-8

By:

Wu, Ruiting;
Gao, Yan;
Wu, Jiaqin;
Wang, Chunli;
Yang, Li

Publication type:

Article

Gene expression profiles of the thermotolerant yeast Saccharomyces cerevisiae strain KKU-VN8 during high-temperature ethanol fermentation using sweet sorghum juice.

Published in:

Biotechnology Letters, 2017, v. 39, n. 10, p. 1521, doi. 10.1007/s10529-017-2398-y

By:

Techaparin, Atiya;
Thanonkeo, Pornthap;
Klanrit, Preekamol

Publication type:

Article

Analysis of microbial volatile organic compounds produced by wood-decay fungi.

Published in:

Biotechnology Letters, 2015, v. 37, n. 9, p. 1845, doi. 10.1007/s10529-015-1870-9

By:

Konuma, Rumi;
Umezawa, Kiwamu;
Mizukoshi, Atsushi;
Kawarada, Kensuke;
Yoshida, Makoto

Publication type:

Article

Characterization and constitutive expression of a novel endo-1,4-β- d-xylanohydrolase from Aspergillus niger in Pichia pastoris.

Published in:

Biotechnology Letters, 2013, v. 35, n. 9, p. 1433, doi. 10.1007/s10529-013-1220-8

By:

Zheng, Jia;
Guo, Ning;
Wu, Lishuang;
Tian, Jian;
Zhou, Hongbo

Publication type:

Article

Integrative analysis of transcriptome-wide association study data and mRNA expression profiles identified candidate genes and pathways associated with atrial fibrillation.

Published in:

Heart & Vessels, 2019, v. 34, n. 11, p. 1882, doi. 10.1007/s00380-019-01418-w

By:

Zhang, Lu;
Liu, Li;
Ma, Mei;
Cheng, Shiqiang;
Cheng, Bolun;
Li, Ping;
Wen, Yan;
Du, Yanan;
Liang, Xiao;
Zhao, Yan;
Ding, Miao;
Xin, Qi;
Liang, Chujun;
Huang, Huimei;
Zhang, Feng

Publication type:

Article

A Secondary Metabolite of Cercospora sp., Associated with Rosa damascena Mill., Inhibits Proliferation, Biofilm Production, Ergosterol Synthesis and Other Virulence Factors in Candida albicans.

Published in:

Microbial Ecology, 2023, v. 85, n. 4, p. 1276, doi. 10.1007/s00248-022-02003-x

By:

Bashir, Abid;
Ahmad, Tanveer;
Farooq, Sadaqat;
Lone, Waseem I.;
Manzoor, Malik M.;
Nalli, Yedukondalu;
Sultan, Phalisteen;
Chaubey, Asha;
Ali, Asif;
Riyaz-Ul-Hassan, Syed

Publication type:

Article

Mussismilia braziliensis White Plague Disease Is Characterized by an Affected Coral Immune System and Dysbiosis.

Published in:

Microbial Ecology, 2021, v. 81, n. 3, p. 795, doi. 10.1007/s00248-020-01588-5

By:

Silva-Lima, A. W.;
Froes, A. M.;
Garcia, G. D.;
Tonon, L. A. C.;
Swings, J.;
Cosenza, C. A. N.;
Medina, M.;
Penn, K.;
Thompson, J. R.;
Thompson, C. C.;
Thompson, F. L.

Publication type:

Article

Shifts in Composition and Activity of Oral Biofilms After Fluoride Exposure.

Published in:

Microbial Ecology, 2020, v. 80, n. 3, p. 729, doi. 10.1007/s00248-020-01531-8

By:

López-López, A.;
Mira, A.

Publication type:

Article

Establishment of a protocol for large-scale gene expression analyses of laser capture microdissected bladder tissue.

Published in:

World Journal of Urology, 2012, v. 30, n. 6, p. 853, doi. 10.1007/s00345-012-0881-6

By:

Horstmann, M.;
Foerster, B.;
Brader, N.;
John, H.;
Maake, C.

Publication type:

Article

Analysis of heaping-induced decline in olive quality: insights from integrated analysis between phenotypic traits and gene expression profiles.

Published in:

Tree Physiology, 2024, v. 44, n. 7, p. 1, doi. 10.1093/treephys/tpae066

By:

Wang, Chenhe;
Cui, Qizhen;
Liu, Qingqing;
Fan, Yutong;
Li, Qiaohua;
Zhao, Min;
Zhao, Liangmei;
Zhang, Jianguo;
Rao, Guodong

Publication type:

Article

Comparative transcriptomics of the chilling stress response in two Asian mangrove species, Bruguiera gymnorhiza and Rhizophora apiculata.

Published in:

Tree Physiology, 2024, v. 44, n. 3, p. 1, doi. 10.1093/treephys/tpae019

By:

Short, Aidan W;
Sebastian, John Sunoj V;
Huang, Jie;
Wang, Guannan;
Dassanayake, Maheshi;
Finnegan, Patrick M;
Parker, John D;
Cao, Kun-Fang;
Wee, Alison K S

Publication type:

Article

Transcriptomic and physiological comparison of Shatangju (Citrus reticulata) and its late-maturing mutant provides insights into auxin regulation of citrus fruit maturation.

Published in:

Tree Physiology, 2023, v. 43, n. 10, p. 1841, doi. 10.1093/treephys/tpad089

By:

Lv, Yuanda;
Ren, Shuang;
Wu, Bo;
Jiang, Caizhong;
Jiang, Bo;
Zhou, Birong;
Zhong, Guangyan;
Zhong, Yun;
Yan, Huaxue

Publication type:

Article

Effects of drought and rehydration on root gene expression in seedlings of Pinus massoniana Lamb.

Published in:

Tree Physiology, 2023, v. 43, n. 9, p. 1619, doi. 10.1093/treephys/tpad063

By:

Chen, Xinhua;
Chen, Hu;
Xu, Huilan;
Li, Mei;
Luo, Qunfeng;
Wang, Ting;
Yang, Zhangqi;
Gan, Siming

Publication type:

Article

Lipidomic and comparative transcriptomic analysis of fatty acid synthesis pathway in Carya illinoinensis embryo.

Published in:

Tree Physiology, 2023, v. 43, n. 9, p. 1675, doi. 10.1093/treephys/tpad061

By:

Lyu, Yun-Zhou;
Jiang, Hao;
Sun, Hai-Nan;
Yang, Yong;
Chao, Yang;
Huang, Li-Bin;
Dong, Xiao-Yun

Publication type:

Article

Transcriptomic and metabolomic analyses unveil the growth advantage mechanism conferred by heterosis of Michelia 'Zhongshanhanxiao'.

Published in:

Tree Physiology, 2023, v. 43, n. 8, p. 1454, doi. 10.1093/treephys/tpad046

By:

Chen, Tingting;
Wang, Zhiquan;
Wang, Junjie;
Liu, Jiaqi;
Zhang, Rui;
Jia, Xiaoyu;
Yu, Chaoguang;
Yin, Yunlong;
Creech, David

Publication type:

Article

Age-dependent modulation of oleoresin production in the stem of Sindora glabra.

Published in:

Tree Physiology, 2022, v. 42, n. 10, p. 2050, doi. 10.1093/treephys/tpac052

By:

Yu, Niu;
Dong, Mingliang;
Yang, Jinchang;
Li, Rongsheng

Publication type:

Article

Characterization of the early gene expression profile in Populus ussuriensis under cold stress using PacBio SMRT sequencing integrated with RNA-seq reads.

Published in:

Tree Physiology, 2022, v. 42, n. 3, p. 646, doi. 10.1093/treephys/tpab130

By:

Li, Wenlong;
Fu, Yanrui;
Lv, Wanqiu;
Zhao, Shicheng;
Feng, He;
Shao, Liying;
Li, Chenghao;
Yang, Jingli

Publication type:

Article

Metabolic profiling and gene expression analysis provides insights into flavonoid and anthocyanin metabolism in poplar.

Published in:

Tree Physiology, 2021, v. 41, n. 6, p. 1046, doi. 10.1093/treephys/tpaa152

By:

Tian, Yuru;
Li, Qianqian;
Rao, Shupei;
Wang, Aike;
Zhang, Hechen;
Wang, Liangsheng;
Li, Yue;
Chen, Jinhuan

Publication type:

Article

Up-regulation of phenylpropanoid biosynthesis system in peach species by peach aphids produces anthocyanins that protect the aphids against UVB and UVC radiation.

Published in:

Tree Physiology, 2021, v. 41, n. 3, p. 428, doi. 10.1093/treephys/tpaa132

By:

Zhou, Wei;
Jia, Mingyue;
Zhang, Guangchen;
Sun, Jian;
Li, Qilong;
Wang, Xianling;
Hua, Juan;
Luo, Shihong

Publication type:

Article

Coexpression analysis of a large-scale transcriptome identified a calmodulin-like protein regulating the development of adventitious roots in poplar.

Published in:

Tree Physiology, 2020, v. 40, n. 10, p. 1405, doi. 10.1093/treephys/tpaa078

By:

Xiao, Zheng'ang;
Zhang, Yan;
Liu, Meifeng;
Zhan, Chang;
Yang, Xiaoqing;
Nvsvrot, Tashbek;
Yan, Zhaogui;
Wang, Nian

Publication type:

Article