Works about FUNCTIONAL genomics

Results: 2045

Haplotype-resolved genome assembly of the tetraploid potato cultivar Désirée.

Published in:

Scientific Data, 2025, v. 12, n. 1, p. 1, doi. 10.1038/s41597-025-05372-3

By:

Godec, Tim;
Beier, Sebastian;
Rodriguez-Granados, Natalia Yaneth;
Sasidharan, Rashmi;
Abdelhakim, Lamis;
Teige, Markus;
Usadel, Björn;
Gruden, Kristina;
Petek, Marko

Publication type:

Article

Genome assembly of the maize inbred line A188 provides a new reference genome for functional genomics.

Published in:

Crop Journal (2095-5421), 2022, v. 10, n. 1, p. 47, doi. 10.1016/j.cj.2021.08.002

By:

Fei Ge;
Jingtao Qu;
Peng Liu;
Lang Pan;
Chaoying Zou;
Guangsheng Yuan;
Cong Yang;
Guangtang Pan;
Jianwei Huang;
Langlang Ma;
Yaou Shen

Publication type:

Article

Mitogenome comparative analysis of 3 Myotis species endemic to Mexico and detecting selection in OXPHOS genes.

Published in:

Journal of Mammalogy, 2025, v. 106, n. 3, p. 587, doi. 10.1093/jmammal/gyae144

By:

Gutiérrez, Edgar G;
Ortega, Jorge

Publication type:

Article

Candida albicans : a historical overview of investigations into an important human pathogen.

Published in:

Canadian Journal of Microbiology, 2025, v. 71, p. 1, doi. 10.1139/cjm-2025-0036

By:

Shrivastava, Manjari;
Whiteway, Malcolm

Publication type:

Article

Decoding the expression patterns and characterisation of calmodulin and calmodulin-like gene families in watermelon (Citrullus lanatus) under abiotic stresses.

Published in:

Functional Plant Biology, 2025, v. 52, n. 6, p. 1, doi. 10.1071/FP25023

By:

Aslam, Ali;
Zhang, Ruimin;
Waseem, Muhammad;
Huang, Zhang;
Masroor, Ashir;
Kiran, Munazza;
Ahmed, Temoor;
Tayyab, Muhammad;
Nawaz, Rabia;
Azam, Muhammad;
Babur, Muhammad Naveed;
Muhammad, Sher;
Razzaq, Muhammad Khuram;
Ahmad, Zainab;
Shi, Qinghua;
Tahir, Ammara;
Khan, Idrees

Publication type:

Article

Past trauma, better future: how stress memory shapes plant adaptation to drought.

Published in:

Functional Plant Biology, 2025, v. 52, n. 6, p. 1, doi. 10.1071/FP24355

By:

Rahman, Md. Mezanur;
Keya, Sanjida Sultana;
Bulle, Mallesham;
Ahsan, S.M.;
Rahman, Md. Abiar;
Roni, Md. Shyduzzaman;
Al Noor, Md. Mahmud;
Hasan, Mehedi

Publication type:

Article

Transcriptome analysis of Thevetia peruviana cell suspensions treated with methyl jasmonate reveals genes involved in phenolics, flavonoids and cardiac glycosides biosynthesis.

Published in:

Frontiers in Plant Science, 2025, p. 1, doi. 10.3389/fpls.2025.1593315

By:

Cuaspud, Olmedo;
Mendoza, Dary;
Navarro, Gigliola;
Arias, Juan;
Calle, Isabel;
Arcila-Galvis, Juliana;
Arango Isaza, Rafael Eduardo

Publication type:

Article

Novel compound heterozygous DOCK6 variants expand the mutational spectrum in prenatal diagnosis of Adams-Oliver syndrome 2.

Published in:

2025

By:

Zhong, Xue;
Zheng, Xuan;
Xv, Yinglei;
Cai, Kangxi;
Wang, Qianqian;
Liu, Shiguo

Publication type:

Case Study

Alagille Syndrome: Unraveling the Complexities of Genotype–Phenotype Relationships and Exploring Avenues for Improved Diagnosis and Treatment.

Published in:

Cell Biology International, 2025, v. 49, n. 5, p. 435, doi. 10.1002/cbin.70009

By:

Sharma, Priya;
Abbey, Deepti

Publication type:

Article

Image-based identification and isolation of micronucleated cells to dissect cellular consequences.

Published in:

eLife, 2025, p. 1, doi. 10.7554/eLife.101579

By:

DiPeso, Lucian;
Pendyala, Sriram;
Huang, Heather Z.;
Fowler, Douglas M.;
Hatch, Emily M.

Publication type:

Article

Connection between circulating inflammatory cytokines and non-small cell lung cancer: integrated Mendelian randomization and gene function analysis.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02817-4

By:

Niu, Ke;
Tang, Jing;
Zhong, Jianxin;
Zheng, Lin;
Zhu, Yayu;
Ling, Huijuan;
Liu, Yu;
Xu, Qing;
Qiu, Ping;
Chen, Liwen

Publication type:

Article

A Sox2 enhancer cluster regulates region-specific neural fates from mouse embryonic stem cells Open Access.

Published in:

G3: Genes | Genomes | Genetics, 2025, v. 15, n. 4, p. 1, doi. 10.1093/g3journal/jkaf012

By:

Tobias, Ian C;
Moorthy, Sakthi D;
Shchuka, Virlana M;
Langroudi, Lida;
Cherednychenko, Mariia;
Gillespie, Zoe E;
Duncan, Andrew G;
Tian, Ruxiao;
Gajewska, Natalia A;
Roberto, Raphaël B Di;
Mitchell, Jennifer A

Publication type:

Article

Novel and conserved drought-responsive microRNAs expression analysis in root tissues of wheat (Triticum asetivum L.) at reproductive stage.

Published in:

Frontiers in Plant Science, 2025, p. 1, doi. 10.3389/fpls.2025.1581542

By:

Sharma, Pradeep;
Mishra, Shefali;
Kaur, Amandeep;
Ahlawat, O. P.;
Tiwari, Ratan

Publication type:

Article

The Application of Genomics to Food Microbiology Research.

Published in:

Journal of Chinese Institute of Food Science & Technology / Zhongguo Shipin Xuebao, 2025, v. 25, n. 4, p. 1, doi. 10.16429/j.1009-7848.2025.04.001

By:

ZHAI Qixiao;
ZHANG Chuan

Publication type:

Article

Chromosome-scale genome assembly of the fire blight resistant Malus fusca accession MAL0045, donor of FB_Mfu10.

Published in:

Scientific Data, 2025, v. 12, n. 1, p. 1, doi. 10.1038/s41597-025-05232-0

By:

Emeriewen, Ofere Francis;
Wöhner, Thomas Wolfgang;
Flachowsky, Henryk;
Peil, Andreas

Publication type:

Article

Full-length transcriptomes of 25 grassland plant species.

Published in:

Scientific Data, 2025, v. 12, n. 1, p. 1, doi. 10.1038/s41597-025-05280-6

By:

Jiang, Chongyi;
Huang, Zixia;
Meizoso, Cynthia;
Kumpfmüller, Gaby;
Wolf, Jochen B. W.;
Schielzeth, Holger

Publication type:

Article

The genetic interaction map of the human solute carrier superfamily.

Published in:

Molecular Systems Biology, 2025, v. 21, n. 6, p. 531, doi. 10.1038/s44320-025-00105-5

By:

Wolf, Gernot;
Leippe, Philipp;
Onstein, Svenja;
Goldmann, Ulrich;
Frommelt, Fabian;
Teoh, Shao Thing;
Girardi, Enrico;
Wiedmer, Tabea;
Superti-Furga, Giulio

Publication type:

Article

Functional genomics reveals adipose-kidney crosstalk as a contributor to kidney fibrosis via the OSM-OSMR pathway.

Published in:

Functional & Integrative Genomics, 2025, v. 25, n. 1, p. 1, doi. 10.1007/s10142-025-01624-y

By:

Zhang, Jing;
Liu, Zhaojun;
Dong, Shihui;
Xu, Kun;
Wang, Kangchun;
Gong, Luyu;
Liu, Qiaoqiao;
Guo, Yue;
Zhu, Yeping;
She, Jingrong;
Jiang, Song;
Shi, Shaolin;
Liu, Zhihong;
Yang, Jingping

Publication type:

Article

Integrating Genetic Diversity and Agronomic Innovations for Climate-Resilient Maize Systems.

Published in:

Plants (2223-7747), 2025, v. 14, n. 10, p. 1552, doi. 10.3390/plants14101552

By:

Li, Xin;
Li, Yunlong;
Sun, Yan;
Li, Sinan;
Cai, Quan;
Li, Shujun;
Sun, Minghao;
Yu, Tao;
Meng, Xianglong;
Zhang, Jianguo

Publication type:

Article

Large-Scale Rice Mutant Establishment and High-Throughput Mutant Manipulation Help Advance Rice Functional Genomics.

Published in:

Plants (2223-7747), 2025, v. 14, n. 10, p. 1492, doi. 10.3390/plants14101492

By:

Wolella, Eyob Kassaye;
Cheng, Zhen;
Li, Mengyuan;
Xia, Dandan;
Zhang, Jianwei;
Duan, Liu;
Liu, Li;
Li, Zhiyong;
Zhang, Jian

Publication type:

Article

Genetic Background and Gene Essentiality.

Published in:

Genes, 2025, v. 16, n. 5, p. 570, doi. 10.3390/genes16050570

By:

Gąsienica, Paulina;
Toch, Katarzyna;
Zając-Garlacz, Kamila Stefania;
Labocha-Derkowska, Marta

Publication type:

Article

Genome-Wide Analysis of bZIP Transcription Factor Family and Its Expression in Graft Healing of Soapberry (Sapindus mukorossi Gaertn.).

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 10, p. 4862, doi. 10.3390/ijms26104862

By:

Chen, Na;
Wang, Lixian;
Zhong, Jing;
Jia, Liming;
Chen, Zhong

Publication type:

Article

CRISPR/Cas9-Mediated Knockout of the White Gene in Agasicles hygrophila.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 10, p. 4586, doi. 10.3390/ijms26104586

By:

Fu, Li;
Li, Penghui;
Rui, Zhiyi;
Sun, Jiang;
Yang, Jun;
Wang, Yuanxin;
Jia, Dong;
Hu, Jun;
Li, Xianchun;
Ma, Ruiyan

Publication type:

Article

Insecticide susceptibility in a planthopper pest increases following inoculation with cultured Arsenophonus.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2024, v. 18, n. 1, p. 1, doi. 10.1093/ismejo/wrae194

By:

Cai, Tingwei;
Nadal-Jimenez, Pol;
Gao, Yuanyuan;
Arai, Hiroshi;
Li, Chengyue;
Su, Chunyan;
King, Kayla C;
He, Shun;
Li, Jianhong;
Hurst, Gregory D D;
Wan, Hu

Publication type:

Article

The Dawning Era of Personalized Medicine Exposes a Gap in Medical Education.

Published in:

PLoS Medicine, 2009, v. 6, n. 8, p. 1, doi. 10.1371/journal.pmed.1000138

By:

Salari, Keyan

Publication type:

Article

DREAM6 Breaks New Ground.

Published in:

Bio-IT World, 2011, v. 10, n. 4, p. 49

By:

RUSSELL, JOHN

Publication type:

Article

Biomimetic RNA-Silencing Nanocomplexes: Overcoming Multidrug Resistance in Cancer Cells.

Published in:

Angewandte Chemie, 2014, v. 126, n. 7, p. 2028, doi. 10.1002/ange.201309985

By:

Wang, Zhongliang;
Wang, Zhe;
Liu, Dingbin;
Yan, Xuefeng;
Wang, Fu;
Niu, Gang;
Yang, Min;
Chen, Xiaoyuan

Publication type:

Article

Development and evaluation of suitable reference genes for qRT-PCR normalization of hybrids derived from Lycium barbarum and Lycium ruthenicum.

Published in:

Molecular Biology Reports, 2024, v. 51, n. 1, p. 1, doi. 10.1007/s11033-024-09848-0

By:

Liu, Yu;
Shi, Wenjun;
Zhang, Defang

Publication type:

Article

Transcriptome-wide identification of ARF gene family in medicinal plant Polygonatum kingianum and expression analysis of PkARF members in different tissues.

Published in:

Molecular Biology Reports, 2024, v. 51, n. 1, p. 1, doi. 10.1007/s11033-024-09608-0

By:

Wang, Wen-Xiang;
Yang, Ce;
Xiong, Wei;
Chen, Chun-Yu;
Li, Ning

Publication type:

Article

Karyotype evolution in monitor lizards: cross-species chromosome mapping of cDNA reveals highly conserved synteny and gene order in the Toxicofera clade.

Published in:

Chromosome Research, 2013, v. 21, n. 8, p. 805, doi. 10.1007/s10577-013-9398-0

By:

Srikulnath, Kornsorn;
Uno, Yoshinobu;
Nishida, Chizuko;
Matsuda, Yoichi

Publication type:

Article

Genome-wide comparative analysis of Mg transporter gene family between Triticum turgidum and Camelina sativa.

Published in:

BioMetals, 2021, v. 34, n. 3, p. 639, doi. 10.1007/s10534-021-00301-4

By:

Faraji, Sahar;
Ahmadizadeh, Mostafa;
Heidari, Parviz

Publication type:

Article

Functional Metagenomics as a Tool for Identification of New Antibiotic Resistance Genes from Natural Environments.

Published in:

Microbial Ecology, 2017, v. 73, n. 2, p. 479, doi. 10.1007/s00248-016-0866-x

By:

Santos, Débora;
Istvan, Paula;
Quirino, Betania;
Kruger, Ricardo

Publication type:

Article

Characterization of aromatic aminotransferases from Ephedra sinica Stapf.

Published in:

Amino Acids, 2016, v. 48, n. 5, p. 1209, doi. 10.1007/s00726-015-2156-1

By:

Kilpatrick, Korey;
Pajak, Agnieszka;
Hagel, Jillian;
Sumarah, Mark;
Lewinsohn, Efraim;
Facchini, Peter;
Marsolais, Frédéric

Publication type:

Article

Integrative physiological and transcriptome analyses elucidate the effect of shading during the grain-filling stage of wheat (Triticum aestivum) cv. ZY96-3.

Published in:

Functional Plant Biology, 2025, v. 52, n. 4, p. 1, doi. 10.1071/FP25013

By:

Li, Tao;
Arif, Muhammad;
Wang, Zhongni;
Shi, Guanyin;
Aljumaiah, Lulwah Zeyad;
Xu, Ling;
Ren, Mingjian;
Xu, Ruhong;
Li, Luhua

Publication type:

Article

The role of nuclear factor-Y (NF-Y) transcription factor in plant growth and development.

Published in:

Functional Plant Biology, 2025, v. 52, n. 4, p. 1, doi. 10.1071/FP25010

By:

Hong, Jiayi;
Feng, Xiaofeng;
Cai, Yongping;
Manzoor, Muhammad Aamir;
Cao, Yunpeng

Publication type:

Article

Enhancing the productivity and resilience of rice (Oryza sativa) under environmental stress conditions using clustered regularly interspaced short palindromic repeats (CRISPR) technology.

Published in:

2025

By:

Riaz, Aamir;
Uzair, Muhammad;
Raza, Ali;
Inam, Safeena;
Iqbal, Rashid;
Jameel, Saima;
Bibi, Bushra;
Khan, Muhammad Ramzan

Publication type:

Literature Review

Short-term and long-term fluoride stress induce differential molecular and transcriptional regulation and variable ranges of fluoride tolerance in two indica rice (Oryza sativa) varieties.

Published in:

Functional Plant Biology, 2025, v. 52, n. 1, p. 1, doi. 10.1071/FP23323

By:

Singh, Ankur;
Banerjee, Aditya;
Roychoudhury, Aryadeep

Publication type:

Article

Glycoside hydrolases reveals their differential role in response to drought and salt stress in potato (Solanum tuberosum).

Published in:

Functional Plant Biology, 2024, v. 51, n. 9, p. 1, doi. 10.1071/FP24114

By:

Aiana;
Chauhan, Hanny;
Singh, Kashmir

Publication type:

Article

Genome editing for improvement of biotic and abiotic stress tolerance in cereals.

Published in:

Functional Plant Biology, 2024, v. 51, n. 9, p. 1, doi. 10.1071/FP24092

By:

Inam, Safeena;
Muhammad, Amna;
Irum, Samra;
Rehman, Nazia;
Riaz, Aamir;
Uzair, Muhammad;
Khan, Muhammad Ramzan

Publication type:

Article

Comprehensive analysis of potato (Solanum tuberosum) PYL genes highlights their role in stress responses.

Published in:

Functional Plant Biology, 2024, v. 51, n. 8, p. 1, doi. 10.1071/FP24094

By:

Gul, Shareef;
Gul, Hameed;
Shahzad, Muhammad;
Ullah, Ikram;
Shahzad, Ali;
Khan, Shahid Ullah

Publication type:

Article

Molecular cloning and characterisation of root-specific SlREO promoter of the Indian tomato (Solanum lycopersicum L.) cultivar.

Published in:

Functional Plant Biology, 2024, v. 51, n. 7, p. 1, doi. 10.1071/FP24063

By:

Jenny, Penki;
Sakure, Amar A.;
Yadav, Ankit;
Kumar, Sushil

Publication type:

Article

Computational analysis and expression profiling of two-component system (TCS) gene family members in mango (Mangifera indica) indicated their roles in stress response.

Published in:

Functional Plant Biology, 2024, v. 51, n. 7, p. 1, doi. 10.1071/FP24055

By:

Sadaqat, Muhammad;
Fatima, Kinza;
Azeem, Farrukh;
Shaheen, Tayyaba;
Rahman, Mahmood-ur-;
Ali, Tehreem;
Al-Megrin, Wafa Abdullah I.;
Tahir ul Qamar, Muhammad

Publication type:

Article

High night temperature stress on rice (Oryza sativa) – insights from phenomics to physiology. A review.

Published in:

Functional Plant Biology, 2024, v. 51, n. 6, p. 1, doi. 10.1071/FP24057

By:

Riaz, Awais;
Thomas, Julie;
Ali, Hafiz Haider;
Zaheer, Muhammad Saqlain;
Ahmad, Naushad;
Pereira, Andy

Publication type:

Article

Identification of cysteine-rich receptor-like kinase gene family in potato: revealed StCRLK9 in response to heat, salt and drought stresses.

Published in:

Functional Plant Biology, 2024, v. 51, n. 6, p. 1, doi. 10.1071/FP23320

By:

Zameer, Roshan;
Alwutayd, Khairiah Mubarak;
Alshehri, Dikhnah;
Mubarik, Muhammad Salman;
Li, Cheng;
Yu, Chengde;
Li, Zhifang

Publication type:

Article

Developing Portulaca oleracea as a model system for functional genomics analysis of C<sub>4</sub>/CAM photosynthesis.

Published in:

Functional Plant Biology, 2021, v. 48, n. 7, p. 666, doi. 10.1071/FP20202

By:

Callegari Ferrari, Renata;
Pires Bittencourt, Priscila;
Yumi Nagumo, Paula;
Silva Oliveira, Willian;
Aurineide Rodrigues, Maria;
Hartwell, James;
Freschi, Luciano

Publication type:

Article

Exploring plant responses to aphid feeding using a full Arabidopsis microarray reveals a small number of genes with significantly altered expression.

Published in:

Bulletin of Entomological Research, 2007, v. 97, n. 5, p. 523, doi. 10.1017/S0007485307005160

By:

Couldridge, C.;
Newbury, H.J.;
Ford-Lloyd, B.;
Bale, J.;
Pritchard, J.

Publication type:

Article

Phytoplankton assemblage during the North Atlantic spring bloom assessed from functional gene analysis.

Published in:

Journal of Plankton Research, 2016, v. 38, n. 5, p. 1135, doi. 10.1093/plankt/fbw043

By:

WARD, BESS B.;
VAN OOSTENDE, NICOLAS

Publication type:

Article

caRpools: an R package for exploratory data analysis and documentation of pooled CRISPR/Cas9 screens.

Published in:

Bioinformatics, 2016, v. 32, n. 4, p. 632, doi. 10.1093/bioinformatics/btv617

By:

Winter, Jan;
Breinig, Marco;
Heigwer, Florian;
Brügemann, Dirk;
Leible, Svenja;
Pelz, Oliver;
Tianzuo Zhan;
Boutros, Michael

Publication type:

Article

ScreenBEAM: a novel meta-analysis algorithm for functional genomics screens via Bayesian hierarchical modeling.

Published in:

Bioinformatics, 2016, v. 32, n. 2, p. 260, doi. 10.1093/bioinformatics/btv556

By:

Jiyang Yu;
Silva, Jose;
Califano, Andrea

Publication type:

Article

VSEAMS: a pipeline for variant set enrichment analysis using summary GWAS data identifies IKZF3, BATF and ESRRA as key transcription factors in type 1 diabetes.

Published in:

Bioinformatics, 2014, v. 30, n. 23, p. 3342, doi. 10.1093/bioinformatics/btu571

By:

Burren, Oliver S.;
Guo, Hui;
Wallace, Chris

Publication type:

Article