Works about FISH genomes

Results: 341

Rhodopsin gene copies in Japanese eel originated in a teleost-specific genome duplication.

Published in:

Zoological Letters, 2017, v. 3, p. 1, doi. 10.1186/s40851-017-0079-2

By:

Yoji Nakamura;
Motoshige Yasuike;
Miyuki Mekuchi;
Yuki Iwasaki;
Nobuhiko Ojima;
Atushi Fujiwara;
Seinen Chow;
Kenji Saitoh

Publication type:

Article

Scientific advice on the suitability of data for the assessment of DNA integration into the fish genome of a genetically modified DNA plasmid-based veterinary vaccine.

Published in:: EFSA Journal, 2013, v. 11, n. 5, p. n/a, doi. 10.2903/j.efsa.2013.3232
Publication type:: Article

Genome of Tenualosa ilisha from the river Padma, Bangladesh.

Published in:

BMC Research Notes, 2018, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13104-018-4028-8

By:

Das, Avizit;
Ianakiev, Peter;
Baten, Abdul;
Nehleen, Rifath;
Ehsan, Tasneem;
Ahmed, Oly;
Islam, Mohammad Riazul;
Naser, M. Niamul;
Marma, Mong Sano;
Khan, Haseena

Publication type:

Article

Construction and characterization of a bacterial artificial chromosome library for mandarin fish Siniperca chuatsi (Basilewsky).

Published in:

Genes & Genetic Systems, 2016, v. 91, n. 3, p. 189, doi. 10.1266/ggs.15-00076

By:

Liyuan Lv;
Xu-Fang Liang;
Changxu Tian;
Ling Li;
Shan He;
Wenjie Guo

Publication type:

Article

Repertoire of Protein Kinases Encoded in the Genome of Takifugu rubripes.

Published in:

Comparative & Functional Genomics, 2012, p. 1, doi. 10.1155/2012/258284

By:

Rakshambikai, R.;
Yamunadevi, S.;
Anamika, K.;
Tyagi, N.;
Srinivasan, N.

Publication type:

Article

Chemical reprogramming enhances homology-directed genome editing in zebrafish embryos.

Published in:

Communications Biology, 2019, v. 2, n. 1, p. N.PAG, doi. 10.1038/s42003-019-0444-0

By:

Aksoy, Yagiz A.;
Nguyen, David T.;
Chow, Sharron;
Chung, Roger S.;
Guillemin, Gilles J.;
Cole, Nicholas J.;
Hesselson, Daniel

Publication type:

Article

An improved genome assembly for Larimichthys crocea reveals hepcidin gene expansion with diversified regulation and function.

Published in:

Communications Biology, 2018, v. 1, n. 1, p. N.PAG, doi. 10.1038/s42003-018-0207-3

By:

Mu, Yinnan;
Huo, Jieying;
Guan, Yanyun;
Fan, Dingding;
Xiao, Xiaoqiang;
Wei, Jingguang;
Li, Qiuhua;
Mu, Pengfei;
Ao, Jingqun;
Chen, Xinhua

Publication type:

Article

Differences in Mate Pairings of Hatchery- and Natural-Origin Coho Salmon Inferred from Offspring Genotypes.

Published in:

Integrative Organismal Biology, 2021, v. 3, n. 1, p. 1, doi. 10.1093/iob/obab020

By:

Auld, H L;
Jacobson, D P;
Rhodes, A C;
Banks, M A

Publication type:

Article

Universal PCR primers for ribosomal protein gene introns of fish.

Published in:

International Aquatic Research, 2016, v. 8, n. 1, p. 29, doi. 10.1007/s40071-016-0122-5

By:

Chow, Seinen;
Yanagimoto, Takashi

Publication type:

Article

Conserved Noncoding Elements in the Most Distant Genera of Cephalochordates: The Goldilocks Principle.

Published in:

Genome Biology & Evolution, 2016, v. 8, n. 8, p. 2387, doi. 10.1093/gbe/evw158

By:

Jia-Xing Yue;
Iryna Kozmikova;
Hiroki Ono;
Nossa, Carlos W.;
Zbynek Kozmik;
Putnam, Nicholas H.;
Jr-Kai Yu;
Holland, Linda Z.

Publication type:

Article

X. couchianus and X. hellerii genome models provide genomic variation insight among Xiphophorus species.

Published in:

BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-015-2361-z

By:

Yingjia Shen;
Chalopin, Domitille;
Garcia, Tzintzuni;
Boswell, Mikki;
Boswell, William;
Shiryev, Sergey A.;
Agarwala, Richa;
Volff, Jean-Nicolas;
Postlethwait, John H.;
Schartl, Manfred;
Minx, Patrick;
Warren, Wesley C.;
Walter, Ronald B.

Publication type:

Article

Transcriptomics of diapause in an isogenic self-fertilizing vertebrate.

Published in:

BMC Genomics, 2015, v. 16, p. 1, doi. 10.1186/s12864-015-2210-0

By:

Mesak, Felix;
Tatarenkov, Andrey;
Avise, John C.

Publication type:

Article

Deep sequencing, profiling and detailed annotation of microRNAs in Takifugu rubripes.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1622-1

By:

Chaninya Wongwarangkana;
Kazuhiro E. Fujimori;
Masaki Akiba;
Shigeharu Kinoshita;
Morimi Teruya;
Maiko Nezuo;
Tsukahara Masatoshi;
Shugo Watabe;
Shuichi Asakawa

Publication type:

Article

Whole genome comparative analysis of channel catfish (Ictalurus punctatus) with four model fish species.

Published in:

BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-780

By:

Yanliang Jiang;
Xiaoyu Gao;
Shikai Liu;
Yu Zhang;
Hong Liu;
Fanyue Sun;
Lisui Bao;
Waldbieser, Geoff;
Zhanjiang Liu

Publication type:

Article

A comprehensive analysis of teleost MHC class I sequences.

Published in:

BMC Evolutionary Biology, 2015, v. 15, n. 1, p. 1, doi. 10.1186/s12862-015-0309-1

By:

Grimholt, Unni;
Tsukamoto, Kentaro;
Azuma, Teruo;
Jong Leong;
Koop, Ben F.;
Dijkstra, Johannes M.

Publication type:

Article

Evolution and genomic organization of muscle microRNAs in fish genomes.

Published in:

BMC Evolutionary Biology, 2014, v. 14, n. 1, p. 1, doi. 10.1186/s12862-014-0196-x

By:

Nachtigall, Pedro Gabriel;
Dias, Marcos Correa;
Pinhal, Danillo

Publication type:

Article

Integrated shotgun sequencing and bioinformatics pipeline allows ultra-fast mitogenome recovery and confirms substantial gene rearrangements in Australian freshwater crayfishes.

Published in:

BMC Evolutionary Biology, 2014, v. 14, n. 1, p. 1, doi. 10.1186/1471-2148-14-19

By:

Han Ming Gan;
Schultz, Mark B.;
Austin, Christopher M.

Publication type:

Article

Transcriptome analysis of rainbow trout in response to non-virion (NV) protein of viral haemorrhagic septicaemia virus (VHSV).

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 4, p. 1827, doi. 10.1007/s00253-014-6366-3

By:

Chinchilla, Blanca;
Encinas, Paloma;
Estepa, Amparo;
Coll, Julio;
Gomez-Casado, Eduardo

Publication type:

Article

Genome-wide estimates of genetic diversity, inbreeding and effective size of experimental and commercial rainbow trout lines undergoing selective breeding.

Published in:

Genetics Selection Evolution, 2019, v. 51, n. 1, p. N.PAG, doi. 10.1186/s12711-019-0468-4

By:

D'Ambrosio, Jonathan;
Phocas, Florence;
Haffray, Pierrick;
Bestin, Anastasia;
Brard-Fudulea, Sophie;
Poncet, Charles;
Quillet, Edwige;
Dechamp, Nicolas;
Fraslin, Clémence;
Charles, Mathieu;
Dupont-Nivet, Mathilde

Publication type:

Article

Genome-wide association and genomic prediction of resistance to viral nervous necrosis in European sea bass (<italic>Dicentrarchus labrax</italic>) using RAD sequencing.

Published in:

Genetics Selection Evolution, 2018, v. 50, n. 1, p. N.PAG, doi. 10.1186/s12711-018-0401-2

By:

Palaiokostas, Christos;
Cariou, Sophie;
Bestin, Anastasia;
Bruant, Jean-Sebastien;
Haffray, Pierrick;
Morin, Thierry;
Cabon, Joëlle;
Allal, François;
Vandeputte, Marc;
Houston, Ross D.

Publication type:

Article

Genomics: Zebrafish earns its stripes.

Published in:

Nature, 2013, v. 496, n. 7446, p. 443, doi. 10.1038/nature12094

By:

Schier, Alexander F.

Publication type:

Article

Partitioning the effects of isolation by distance, environment, and physical barriers on genomic divergence between parapatric threespine stickleback.

Published in:

Evolution, 2017, v. 71, n. 2, p. 342, doi. 10.1111/evo.13110

By:

Weber, Jesse N.;
Bradburd, Gideon S.;
Stuart, Yoel E.;
Stutz, William E.;
Bolnick, Daniel I.

Publication type:

Article

Species-Specific Responses of Juvenile Rockfish to Elevated pCO2: From Behavior to Genomics.

Published in:

PLoS ONE, 2017, v. 12, n. 1, p. 1, doi. 10.1371/journal.pone.0169670

By:

Hamilton, Scott L.;
Logan, Cheryl A.;
Fennie, Hamilton W.;
Sogard, Susan M.;
Barry, James P.;
Makukhov, April D.;
Tobosa, Lauren R.;
Boyer, Kirsten;
Lovera, Christopher F.;
Bernardi, Giacomo

Publication type:

Article

The Genome of the Trinidadian Guppy, Poecilia reticulata, and Variation in the Guanapo Population.

Published in:

PLoS ONE, 2016, v. 11, n. 12, p. 1, doi. 10.1371/journal.pone.0169087

By:

Künstner, Axel;
Hoffmann, Margarete;
Fraser, Bonnie A.;
Kottler, Verena A.;
Sharma, Eshita;
Weigel, Detlef;
Dreyer, Christine

Publication type:

Article

Is Exposure to Macondo Oil Reflected in the Otolith Chemistry of Marsh-Resident Fish?

Published in:

PLoS ONE, 2016, v. 11, n. 9, p. 1, doi. 10.1371/journal.pone.0162699

By:

López-Duarte, Paola C.;
Fodrie, F. Joel;
Jensen, Olaf P.;
Whitehead, Andrew;
Galvez, Fernando;
Dubansky, Benjamin;
Able, Kenneth W.

Publication type:

Article

Correction: Exploring Early Micronutrient Deficiencies in Rainbow Trout (Oncorhynchus mykiss) by Next-Generation Sequencing Technology - From Black Box to Functional Genomics.

Published in:

2016

By:

Olsvik, Pål A.;
Hemre, Gro-Ingunn;
Waagbø, Rune

Publication type:

Correction Notice

Characterization of the Complete Mitochondrial Genome Sequence of the Globose Head Whiptail Cetonurus globiceps (Gadiformes: Macrouridae) and Its Phylogenetic Analysis.

Published in:

PLoS ONE, 2016, v. 11, n. 4, p. 1, doi. 10.1371/journal.pone.0153666

By:

Shi, Xiaofeng;
Tian, Peng;
Lin, Rongcheng;
Huang, Dingyong;
Wang, Jianjia

Publication type:

Article

Complete Mitochondrial Genome of Three Species (Perciformes, Amblyopinae): Genome Description and Phylogenetic Relationships.

Published in:

Pakistan Journal of Zoology, 2018, v. 50, n. 6, p. 2173, doi. 10.17582/journal.pjz/2018.50.6.2173.2183

By:

Zisha Liu;
Na Song;
Takashi Yanagimoto;
Zhiqiang Han;
Bonian Shui;
Tianxiang Gao

Publication type:

Article

In Response: Conservation versus functional diversification of nuclear receptors: An academic perspective.

Published in:

Environmental Toxicology & Chemistry, 2015, v. 34, n. 3, p. 463, doi. 10.1002/etc.2832

By:

Kullman, Seth W.

Publication type:

Article

Persistence of Penaeus stylirostris densovirus delays mortality caused by white spot syndrome virus infection in black tiger shrimp (Penaeus monodon).

Published in:

BMC Veterinary Research, 2013, v. 9, n. 1, p. 1, doi. 10.1186/1746-6148-9-33

By:

Molthathong, Sudkhate;
Jitrakorn, Sarocha;
Joyjinda, Yutthana;
Boonchird, Chuenchit;
Witchayachamnarnkul, Boonsirm;
Pongtippatee, Pattira;
Flegel, Timothy;
Saksmerprome, Vanvimon

Publication type:

Article

Investigating the genetic and epigenetic basis of big biological questions with the parthenogenetic marbled crayfish: A review and perspectives.

Published in:

Journal of Biosciences, 2018, v. 43, n. 1, p. 189, doi. 10.1007/s12038-018-9741-x

By:

VOGT, GÜNTER

Publication type:

Article

Liver transcriptome analysis reveals extensive transcriptional plasticity during acclimation to low salinity in <italic>Cynoglossus semilaevis</italic>.

Published in:

BMC Genomics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12864-018-4825-4

By:

Si, Yufeng;
Wen, Haishen;
Li, Yun;
He, Feng;
Li, Jifang;
Li, Siping;
He, Huiwen

Publication type:

Article

Correction to: De novo transcriptome assembly, annotation and comparison of four ecological and evolutionary model salmonid fish species.

Published in:

2018

By:

Carruthers, Madeleine;
Yurchenko, Andrey A.;
Augley, Julian J.;
Adams, Colin E.;
Herzyk, Pawel;
Elmer, Kathryn R.

Publication type:

Correction Notice

Genomic architecture of haddock (<italic>Melanogrammus aeglefinus)</italic> shows expansions of innate immune genes and short tandem repeats.

Published in:

BMC Genomics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12864-018-4616-y

By:

Tørresen, Ole K.;
Brieuc, Marine S. O.;
Solbakken, Monica H.;
Sørhus, Elin;
Nederbragt, Alexander J.;
Jakobsen, Kjetill S.;
Meier, Sonnich;
Edvardsen, Rolf B.;
Jentoft, Sissel

Publication type:

Article

Insights into teleost sex determination from the Seriola dorsalis genome assembly.

Published in:

BMC Genomics, 2018, v. 19, p. 1, doi. 10.1186/s12864-017-4403-1

By:

Purcell, Catherine M.;
Seetharam, Arun S.;
Snodgrass, Owyn;
Ortega-García, Sofia;
Hyde, John R.;
Severin, Andrew J.

Publication type:

Article

Genomic Basis of Striking Fin Shapes and Colors in the Fighting Fish.

Published in:

Molecular Biology & Evolution, 2021, v. 38, n. 8, p. 3383, doi. 10.1093/molbev/msab110

By:

Wang, Le;
Sun, Fei;
Wan, Zi Yi;
Ye, Baoqing;
Wen, Yanfei;
Liu, Huiming;
Yang, Zituo;
Pang, Hongyan;
Meng, Zining;
Fan, Bin;
Alfiko, Yuzer;
Shen, Yubang;
Bai, Bin;
Lee, May Shu Qing;
Piferrer, Francesc;
Schartl, Manfred;
Meyer, Axel;
Yue, Gen Hua

Publication type:

Article

Biases in Demographic Modeling Affect Our Understanding of Recent Divergence.

Published in:

Molecular Biology & Evolution, 2021, v. 38, n. 7, p. 2967, doi. 10.1093/molbev/msab047

By:

Momigliano, Paolo;
Florin, Ann-Britt;
Merilä, Juha

Publication type:

Article

The role of CcTpt1 in scale and early embryo development in common carp (Cyprinus carpio, Cyprinidae)

Published in:

Molecular Biology Reports, 2013, v. 40, n. 12, p. 6883, doi. 10.1007/s11033-013-2806-x

By:

Jiang, Li;
Wang, Yangyang;
Cheng, Anda;
Zhang, Baoyong;
Ma, Long;
Liu, Yongxin;
Sun, Xiaowen

Publication type:

Article

Linking Landscape-Scale Disturbances to Stress and Condition of Fish: Implications for Restoration and Conservation.

Published in:

Integrative & Comparative Biology, 2015, v. 55, n. 4, p. 618, doi. 10.1093/icb/icv022

By:

Jeffrey, Jennifer D.;
Hasler, Caleb T.;
Chapman, Jacqueline M.;
Cooke, Steven J.;
Suski, Cory D.

Publication type:

Article

The phylogenetic placement of Odontobutis obscura base on complete mitochondrial DNA sequence.

Published in:

Mitochondrial DNA. Part A, 2017, v. 28, n. 3, p. 399, doi. 10.3109/19401736.2015.1127363

By:

Niu, Yandong;
Li, Xiquan;
Zhang, Canming;
Wei, Ying

Publication type:

Article

Complete mitochondrial genome of Ctenopharyngodon idella var. Gold grass carp and its intraspecific comparison.

Published in:

Mitochondrial DNA. Part A, 2017, v. 28, n. 3, p. 372, doi. 10.3109/19401736.2015.1126828

By:

Yu, Lingyun;
Wang, Guangjun

Publication type:

Article

The complete mitochondrial genome of the Placidochromis longimanus.

Published in:

Mitochondrial DNA. Part A, 2017, v. 28, n. 3, p. 340, doi. 10.3109/19401736.2015.1122772

By:

Xiong, Ye;
Qin, Yuxia;
Liu, Liyun;
Liu, Jing;
Jiang, Jie;
Liu, Pei;
Zhang, Lian-Qin;
Qi, Dashi;
Li, Zongyun

Publication type:

Article

Complete mitochondrial genome and phylogenetic analysis of the serpent mudskipper Parapocryptes serperaster (Perciformes, Gobiidae): repetitive sequences in the control region.

Published in:

Mitochondrial DNA. Part A, 2017, v. 28, n. 3, p. 332, doi. 10.3109/19401736.2015.1122769

By:

Qiu, Hengtong;
Zhang, Yuting;
Li, Zhe;
Yang, Mingshu;
Chen, Shixi;
Hong, Wanshu;
Wang, Qiong

Publication type:

Article

The complete mitochondrial genome of Claea dabryi (Teleostei, Nemachilinae, Claea).

Published in:

Mitochondrial DNA. Part A, 2017, v. 28, n. 3, p. 319, doi. 10.3109/19401736.2015.1122763

By:

Li, Qiang;
Liu, Ya;
Chen, Yeyu;
Xiao, Yu;
Du, Jun

Publication type:

Article

The complete mitochondrial genome of the marbled flounder Pseudopleuronectes yokohamae (Pleuronectiformes, Pleuronectidae).

Published in:

Mitochondrial DNA. Part A, 2017, v. 28, n. 3, p. 313, doi. 10.3109/19401736.2015.1118093

By:

Liu, Xuezhou;
Shi, Bao;
Xu, Yongjiang;
Wang, Bing

Publication type:

Article

The complete mitochondrial genome of Lutjanus erythopterus (Perciformes: Lutjanidae) with phylogenetic consideration.

Published in:

Mitochondrial DNA. Part A, 2017, v. 28, n. 3, p. 301, doi. 10.3109/19401736.2015.1043537

By:

Zhou, Libin;
Xie, Zhenzhen

Publication type:

Article

Mitochondrial DNA sequence of ruffe ( Gymnocephalus cernua ).

Published in:

Mitochondrial DNA. Part A, 2017, v. 28, n. 3, p. 299, doi. 10.3109/19401736.2014.1003888

By:

Zhang, Yan;
Li, Yun-Feng;
Shen, Zi-Wei;
Ru, Hui-jun;
Wu, Xiang-Xiang;
Liu, Xiao-Juan;
Ni, Zhao-Hui

Publication type:

Article

Complete mitochondrial genome of Toxabramis houdemeri (Cypriniformes; Cyprinidae) and its phylogenetic analysis.

Published in:

Mitochondrial DNA. Part A, 2017, v. 28, n. 2, p. 292, doi. 10.3109/19401736.2015.1118085

By:

Wang, Pengfei;
Chen, Shixi;
Ou, Youjun;
Wen, Jiufu;
Li, Jia'er

Publication type:

Article

The complete mitochondrial genome sequence of Yongeichthys criniger and phylogenetic studies of Gobiidae.

Published in:

Mitochondrial DNA. Part A, 2017, v. 28, n. 2, p. 281, doi. 10.3109/19401736.2015.1118080

By:

Hu, Yonglai;
Bao, Baolong;
Gong, Xiaoling

Publication type:

Article

Complete mitochondrial genome of Aulonocara stuartgranti (Flavescent peacock cichlid).

Published in:

Mitochondrial DNA. Part A, 2017, v. 28, n. 2, p. 279, doi. 10.3109/19401736.2015.1118079

By:

Zhao, Jia;
Gao, Jian

Publication type:

Article