Works matching DE "EXTRACHROMOSOMAL DNA"

Results: 528

Molecular phylogeny of the tribe Danaideae (Rubiaceae: Rubioideae): Another example of out-of-Madagascar dispersal.

Published in:

Taxon, 2012, v. 61, n. 3, p. 629, doi. 10.1002/tax.613011

By:

Krüger, Åsa;
Razafimandimbison, Sylvain G.;
Bremer, Birgitta

Publication type:

Article

Atomistic insight into sequence-directed DNA bending and minicircle formation propensity in the absence and presence of phased A-tracts.

Published in:

Journal of Computer-Aided Molecular Design, 2020, v. 34, n. 3, p. 253, doi. 10.1007/s10822-020-00288-z

By:

Mills, Alberto;
Gago, Federico

Publication type:

Article

The Relationship Between the Rate of Molecular Evolution and the Rate of Genome Rearrangement in Animal Mitochondrial Genomes.

Published in:

Journal of Molecular Evolution, 2006, v. 63, n. 3, p. 375, doi. 10.1007/s00239-005-0246-5

By:

Wei Xu;
Jameson, Daniel;
Tang, Bin;
Higgs, Paul G.

Publication type:

Article

Nephritogenic ochratoxin A interferes with mitochondrial function and pH homeostasis in immortalized human kidney epithelial cells.

Published in:

Pflügers Archiv: European Journal of Physiology, 2000, v. 440, n. 4, p. 521, doi. 10.1007/s004240000321

By:

Eder, Stefan;
Benesic, Andreas;
Freudinger, Ruth;
Engert, Judith;
Schwerdt, Gerald;
Drumm, Karina;
Gekle, Michael

Publication type:

Article

Structure and evolution of double minutes in diagnosis and relapse brain tumors.

Published in:

Acta Neuropathologica, 2019, v. 137, n. 1, p. 123, doi. 10.1007/s00401-018-1912-1

By:

Xu, Ke;
Ding, Liang;
Chang, Ti-Cheng;
Shao, Ying;
Chiang, Jason;
Mulder, Heather;
Wang, Shuoguo;
Shaw, Tim I.;
Wen, Ji;
Hover, Laura;
McLeod, Clay;
Wang, Yong-Dong;
Easton, John;
Rusch, Michael;
Dalton, James;
Downing, James R.;
Ellison, David W.;
Zhang, Jinghui;
Baker, Suzanne J.;
Wu, Gang

Publication type:

Article

Cymbonotus (Compositae: Arctotideae, Arctotidinae): an endemic Australian genus embedded in a southern African clade.

Published in:

Botanical Journal of the Linnean Society, 2007, v. 153, n. 1, p. 1, doi. 10.1111/j.1095-8339.2007.00596.x

By:

FUNK, VICKI A.;
CHAN, RAYMUND;
HOLLAND, AILSA

Publication type:

Article

Plasmid Costs Explain Plasmid Maintenance, Irrespective of the Nature of Compensatory Mutations.

Published in:

Antibiotics (2079-6382), 2023, v. 12, n. 5, p. 841, doi. 10.3390/antibiotics12050841

By:

Rebelo, João S.;
Domingues, Célia P. F.;
Dionisio, Francisco

Publication type:

Article

Impact of the Respiratory Microbiome on Host Responses to Respiratory Viral Infection.

Published in:

Vaccines, 2017, v. 5, n. 4, p. 40, doi. 10.3390/vaccines5040040

By:

Pichon, Maxime;
Lina, Bruno;
Josset, Laurence

Publication type:

Article

Notes on the Phylogenetic Relationships among Species of Korean Hosta (Liliaceae) Based on Chloroplast DNA Restriction Site Data.

Published in:

Plant Species Biology, 1991, v. 6, n. 1, p. 71, doi. 10.1111/j.1442-1984.1991.tb00211.x

By:

Chung, Myong Gi

Publication type:

Article

Identification and Characterization of Extrachromosomal Circular DNA in Slimming Grass Carp.

Published in:

Biomolecules (2218-273X), 2024, v. 14, n. 9, p. 1045, doi. 10.3390/biom14091045

By:

He, Haobin;
Gao, Zihan;
Hu, Zehua;
Liang, Guanyu;
Huang, Yanhua;
Zhou, Meng;
Liang, Rishen;
Zhang, Kai

Publication type:

Article

Categorizing Extrachromosomal Circular DNA as Biomarkers in Serum of Cancer.

Published in:

Biomolecules (2218-273X), 2024, v. 14, n. 4, p. 488, doi. 10.3390/biom14040488

By:

Deng, Enze;
Fan, Xiaoying

Publication type:

Article

Characterization and functional analysis of extrachromosomal circular DNA discovered from circulating extracellular vesicles in liver failure.

Published in:

Clinical & Translational Medicine, 2024, v. 14, n. 10, p. 1, doi. 10.1002/ctm2.70059

By:

Qian, Yongbing;
Hong, Xiaoning;
Yu, Yang;
Du, Cong;
Li, Jing;
Yu, Jiaying;
Xiao, Wenjun;
Chen, Chen;
Huang, Defa;
Zhong, Tianyu;
Li, Jiang;
Xiang, Xi;
Li, Zhigang

Publication type:

Article

Multi‐omics integration reveals the oncogenic role of eccDNAs in diffuse large B‐cell lymphoma through STING signalling.

Published in:

Clinical & Translational Medicine, 2024, v. 14, n. 8, p. 1, doi. 10.1002/ctm2.1815

By:

Wu, Zijuan;
Zhang, Wei;
Wang, Luqiao;
Leng, Jiayan;
Li, Yongle;
Fan, Zhou;
Zhan, Mengtao;
Cao, Lei;
Jiang, Yongning;
Jiang, Yan;
Sun, Bing;
Fu, Jianxin;
Li, Jianyong;
Shi, Wenyu;
Jin, Hui

Publication type:

Article

Plasma extrachromosomal circular DNA as a potential diagnostic biomarker for nodular thyroid disease.

Published in:

Clinical & Translational Medicine, 2024, v. 14, n. 6, p. 1, doi. 10.1002/ctm2.1740

By:

Zhou, Meng;
Lv, Wei;
Han, Peng;
Sun, Kai;
Hao, Ziqian;
Gao, Ling;
Xu, Yunyun;
Xu, Zhe;
Shao, Shanshan;
Ma, Shizhan;
Guo, Qingling;
Zhang, Haiqing;
Liu, Ke;
Yang, Fan;
Yuan, Zhongshang;
Wu, Guojun;
Yu, Changbin;
Luo, Yonglun;
Yao, Zhenyu;
Zhao, Jiajun

Publication type:

Article

Identification and functional analysis of circulating extrachromosomal circular DNA in schizophrenia implicate its negative effect on the disorder.

Published in:

Clinical & Translational Medicine, 2023, v. 13, n. 11, p. 1, doi. 10.1002/ctm2.1488

By:

Xiang, Xi;
Pan, Xiaoguang;
Lv, Wei;
Chen, Shanshan;
Li, Jinguang;
Zhang, Haoran;
Liao, Yanhui;
Yu, Jiaying;
Li, Jing;
Dang, Yonghui;
You, Zifan;
Wang, Liangliang;
Chen, Wei;
Han, Peng;
Tang, Jinsong

Publication type:

Article

Plasma extrachromosomal circular DNA is a pathophysiological hallmark of short‐term intensive insulin therapy for type 2 diabetes.

Published in:

Clinical & Translational Medicine, 2023, v. 13, n. 10, p. 1, doi. 10.1002/ctm2.1437

By:

Xu, Zhe;
He, Junyu;
Han, Peng;
Dai, Peiji;
Lv, Wei;
Liu, Nian;
Liu, Liyi;
Liu, Liehua;
Pan, Xiaoguang;
Xiang, Xi;
Li, Hanbo;
Ge, Fangfang;
Gao, Shan;
Liao, Zhihong;
Luo, Yonglun;
Li, Yanbing

Publication type:

Article

Small extrachromosomal circular DNAs as biomarkers for multi‐cancer diagnosis and monitoring.

Published in:

Clinical & Translational Medicine, 2023, v. 13, n. 9, p. 1, doi. 10.1002/ctm2.1393

By:

Luo, Xuanmei;
Zhang, Lili;
Cui, Jian;
An, Qi;
Li, Hexin;
Zhang, Zaifeng;
Sun, Gaoyuan;
Huang, Wei;
Li, Yifei;
Li, Chang;
Jia, Wenzhuo;
Zou, Lihui;
Zhao, Gang;
Xiao, Fei

Publication type:

Article

Single‐cell third‐generation sequencing‐based multi‐omics uncovers gene expression changes governed by ecDNA and structural variants in cancer cells.

Published in:

Clinical & Translational Medicine, 2023, v. 13, n. 8, p. 1, doi. 10.1002/ctm2.1351

By:

Chang, Lei;
Deng, Enze;
Wang, Jun;
Zhou, Wei;
Ao, Jian;
Liu, Rong;
Su, Dan;
Fan, Xiaoying

Publication type:

Article

Urinary cell‐free extrachromosomal circular DNAs: A possible biomarker for chronic kidney disease.

Published in:: Clinical & Translational Medicine, 2022, v. 12, n. 6, p. 1, doi. 10.1002/ctm2.925
Publication type:: Article

Circle‐Seq reveals genomic and disease‐specific hallmarks in urinary cell‐free extrachromosomal circular DNAs.

Published in:

Clinical & Translational Medicine, 2022, v. 12, n. 4, p. 1, doi. 10.1002/ctm2.817

By:

Lv, Wei;
Pan, Xiaoguang;
Han, Peng;
Wang, Ziyu;
Feng, Weijia;
Xing, Xue;
Wang, Qingqing;
Qu, Kunli;
Zeng, Yuchen;
Zhang, Cailin;
Xu, Zhe;
Li, Yi;
Zheng, Tianyu;
Lin, Ling;
Liu, Chengxun;
Liu, Xuemei;
Li, Hanbo;
Henriksen, Rasmus Amund;
Bolund, Lars;
Lin, Lin

Publication type:

Article

The bryophyte Physcomitrella patens replicates extrachromosomal transgenic elements.

Published in:

New Phytologist, 2000, v. 146, n. 3, p. 391, doi. 10.1046/j.1469-8137.2000.00671.x

By:

Ashton, Neil W.;
Champagne, Connie E. M.;
Weiler, Tracey;
Verkoczy, Laurent K.

Publication type:

Article

Linked-read based analysis of the medulloblastoma genome.

Published in:

Frontiers in Oncology, 2023, p. 1, doi. 10.3389/fonc.2023.1221611

By:

Zwaig, Melissa;
Johnston, Michael J.;
Lee, John J. Y.;
Farooq, Hamza;
Gallo, Marco;
Jabado, Nada;
Taylor, Michael D.;
Ragoussis, Jiannis

Publication type:

Article

Extrachromosomal DNA (ecDNA) in cancer: mechanisms, functions, and clinical implications.

Published in:

Frontiers in Oncology, 2023, p. 1, doi. 10.3389/fonc.2023.1194405

By:

Yucheng Dong;
Qi He;
Xinyu Chen;
Fan Yang;
Li He;
Yongchang Zheng

Publication type:

Article

Extrachromosomal circular DNA in cancer drug resistance and its potential clinical implications.

Published in:

Frontiers in Oncology, 2023, v. 13, p. 1, doi. 10.3389/fonc.2022.1092705

By:

Juanjuan Luo;
Ying Li;
Tangxuan Zhang;
Tianhan Xv;
Chao Chen;
Mengting Li;
Qixiang Qiu;
Yusheng Song;
Shaogui Wan

Publication type:

Article

Dicyemida and Orthonectida: Two Stories of Body Plan Simplification.

Published in:

Frontiers in Genetics, 2019, p. 1, doi. 10.3389/fgene.2019.00443

By:

Zverkov, Oleg A.;
Mikhailov, Kirill V.;
Isaev, Sergey V.;
Rusin, Leonid Y.;
Popova, Olga V.;
Logacheva, Maria D.;
Penin, Alexey A.;
Moroz, Leonid L.;
Panchin, Yuri V.;
Lyubetsky, Vassily A.;
Aleoshin, Vladimir V.

Publication type:

Article

Shared mechanisms in stemness and carcinogenesis: lessons from oncogenic viruses.

Published in:

Frontiers in Cellular & Infection Microbiology, 2013, v. 3, n. 12, p. 1, doi. 10.3389/fcimb.2013.00066

By:

Iacovides, Demetris;
Michael, Stella;
Achilleos, Charis;
Strati, Katerina

Publication type:

Article

Extrachromosomal circular DNA landscape of breast cancer with lymph node metastasis.

Published in:

International Journal of Cancer, 2024, v. 155, n. 4, p. 756, doi. 10.1002/ijc.34985

By:

Bao, Yuhan;
Sui, Xiaolong;
Wang, Xiaofei;
Qu, Nina;
Xie, Yanjie;
Cong, Yizi;
Cao, Xiaoli

Publication type:

Article

Small but strong: Mutational and functional landscapes of micronuclei in cancer genomes.

Published in:

International Journal of Cancer, 2021, v. 148, n. 4, p. 812, doi. 10.1002/ijc.33300

By:

Guo, Xihan;
Dai, Xueqin;
Wu, Xue;
Cao, Neng;
Wang, Xu

Publication type:

Article

The Response of Ultrastructure and Function of Chloroplasts from Cycads to Doubled CO2 Concentration.

Published in:

Botanical Review, 2004, v. 70, n. 1, p. 72, doi. 10.1663/0006-8101(2004)070[0072:TROUAF]2.0.CO;2

By:

Bao-Yu Zuo;
Quan Zhang;
Gui--Zhen Jiang;
Chia--Jui Chen

Publication type:

Article

Oncogenic structural aberration landscape in gastric cancer genomes.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-39263-1

By:

Saito-Adachi, Mihoko;
Hama, Natsuko;
Totoki, Yasushi;
Nakamura, Hiromi;
Arai, Yasuhito;
Hosoda, Fumie;
Rokutan, Hirofumi;
Yachida, Shinichi;
Kato, Mamoru;
Fukagawa, Akihiko;
Shibata, Tatsuhiro

Publication type:

Article

Characterization of somatic structural variations in 528 Chinese individuals with Esophageal squamous cell carcinoma.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-33994-3

By:

Cui, Heyang;
Zhou, Yong;
Wang, Fang;
Cheng, Caixia;
Zhang, Weimin;
Sun, Ruifang;
Zhang, Ling;
Bi, Yanghui;
Guo, Min;
Zhou, Yan;
Wang, Xinhui;
Ren, Jiaxin;
Bai, Ruibing;
Ding, Ning;
Cheng, Chen;
Wang, Longlong;
Zhuang, Xuehan;
Gao, Mingwei;
Weng, Yongjia;
Wu, Yueguang

Publication type:

Article

Regulation associated modules reflect 3D genome modularity associated with chromatin activity.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-32911-y

By:

Zheng, Lina;
Wang, Wei

Publication type:

Article

DeepECD: A model for predicting plant extrachromosomal circular DNA from sequences.

Published in:

Journal of Biotech Research, 2024, v. 16, p. 345

By:

Jiming Hu;
Zhongzhen Tang;
Yongzhen Wang;
Jun Yan;
Xiaoyong Sun

Publication type:

Article

Sequence Characterization of Extra-Chromosomal Circular DNA Content in Multiple Blackgrass (Alopecurus myosuroides) Populations.

Published in:

Genes, 2023, v. 14, n. 10, p. 1905, doi. 10.3390/genes14101905

By:

Fu, Wangfang;
MacGregor, Dana R.;
Comont, David;
Saski, Christopher A.

Publication type:

Article

Dynamics of Amino Acid Metabolism, Gene Expression, and Circulomics in a Recombinant Chinese Hamster Ovary Cell Line Adapted to Moderate and High Levels of Extracellular Lactate.

Published in:

Genes, 2023, v. 14, n. 8, p. 1576, doi. 10.3390/genes14081576

By:

Chitwood, Dylan G.;
Uy, Lisa;
Fu, Wanfang;
Klaubert, Stephanie R.;
Harcum, Sarah W.;
Saski, Christopher A.

Publication type:

Article

Gene Amplification and the Extrachromosomal Circular DNA.

Published in:

Genes, 2021, v. 12, n. 10, p. 1533, doi. 10.3390/genes12101533

By:

Shimizu, Noriaki

Publication type:

Article

Network Analysis of Plasmidomes: The Azospirillum brasilense Sp245 Case.

Published in:

International Journal of Evolutionary Biology, 2014, p. 1, doi. 10.1155/2014/951035

By:

Orlandini, Valerio;
Emiliani, Giovanni;
Fondi, Marco;
Maida, Isabel;
Perrin, Elena;
Fani, Renato

Publication type:

Article

Two evolutionarily conserved essential β-barrel proteins in the chloroplast outer envelope membrane.

Published in:

BioScience Trends, 2009, v. 3, n. 5, p. 168

By:

Shih-Chi Hsu;
Inoue, Kentaro

Publication type:

Article

AGT Vicki Hopwood Best Poster Winner.

Published in:: Journal of the Association of Genetic Technologists, 2023, v. 49, n. 3, p. 166
Publication type:: Article

Vicki Hopwood Best Poster Winner.

Published in:: Journal of the Association of Genetic Technologists, 2023, v. 49, n. 3, p. 151
Publication type:: Article

DNA Binding and Oxidative Cleavage by a Water-soluble Carboxyl Manganese(III) Corrole.

Published in:

Chinese Journal of Chemistry, 2013, v. 31, n. 10, p. 1321, doi. 10.1002/cjoc.201300488

By:

Zhang, Yang;
Wang, Qi;
Wen, Jinyan;
Wang, Xiangli;
Mahmood, Mian HR;
Ji, Liangnian;
Liu, Haiyang

Publication type:

Article

Two Libyan siblings with beta-ketothiolase deficiency: A case report and review of literature.

Published in:

2017

By:

Abdelkreem, Elsayed;
Alobaidy, Hanna;
Yuka Aoyama;
Mahmoud, Shaimaa;
Abd El Aal, Mohamed;
Toshiyuki Fukao

Publication type:

Case Study

Genetic differentiation and admixture among Festuca idahoensis, F. roemeri, and F. ovina detected in AFLP, ITS, and chloroplast DNA.

Published in:

Botany, 2008, v. 86, n. 4, p. 422, doi. 10.1139/B08-009

By:

Jones, Thomas A.;
Larson, Steven R.;
Wilson, Barbara L.

Publication type:

Article

A simple method for construction of pir+ Enterobacterial hosts for maintenance of R6K replicon plasmids.

Published in:: BMC Research Notes, 2012, v. 5, n. 1, p. 157, doi. 10.1186/1756-0500-5-157
Publication type:: Article

The myriad roles of Miro in the nervous system: axonal transport of mitochondria and beyond.

Published in:

Frontiers in Cellular Neuroscience, 2014, v. 8, p. 1, doi. 10.3389/fncel.2014.00330

By:

Kyu-Sun Lee;
Bingwei Lu

Publication type:

Article

Identification of Testudinis Carapax and Cervi Cornu in Kuei-Lu-Erh-Hsien-Chiao by Nested PCR and DNA Sequencing Methods.

Published in:

Journal of Food & Drug Analysis, 2009, v. 17, n. 3, p. 151

By:

Kang-Tsu Lu;
Chi-Fang Lo;
Jer-Huei Lin

Publication type:

Article

DNA extraction from bovine faeces: current status and future trends.

Published in:

Journal of Applied Microbiology, 2010, v. 108, n. 5, p. 1485, doi. 10.1111/j.1365-2672.2009.04606.x

By:

Rapp, D.

Publication type:

Article

Growth studies of plasmid bearing and plasmid cured Yersinia enterocolitica GER O:3 in the presence of cefsulodin, irgasan and novobiocin at 25 and 37°C.

Published in:

Journal of Applied Microbiology, 2006, v. 100, n. 6, p. 1299, doi. 10.1111/j.1365-2672.2006.02861.x

By:

Logue, C. M.;
Sherwood, J. S.;
Doetkott, C.

Publication type:

Article

Comparative Analysis of Active LTR Retrotransposons in Sunflower (Helianthus annuus L.): From Extrachromosomal Circular DNA Detection to Protein Structure Prediction.

Published in:

International Journal of Molecular Sciences, 2024, v. 25, n. 24, p. 13615, doi. 10.3390/ijms252413615

By:

Kazancev, Mikhail;
Merkulov, Pavel;
Tiurin, Kirill;
Demurin, Yakov;
Soloviev, Alexander;
Kirov, Ilya

Publication type:

Article

Cumulative Deleterious Effects of Tetrahydrocannabinoid (THC) and Ethanol on Mitochondrial Respiration and Reactive Oxygen Species Production Are Enhanced in Old Isolated Cardiac Mitochondria.

Published in:

International Journal of Molecular Sciences, 2024, v. 25, n. 3, p. 1835, doi. 10.3390/ijms25031835

By:

Charles, Anne-Laure;
Charloux, Anne;
Vogel, Thomas;
Raul, Jean-Sébastien;
Kindo, Michel;
Wolff, Valérie;
Geny, Bernard

Publication type:

Article